data-catalog-services/gitea-pages
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move publication instructions to a dedicated page #25

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potier_f wants to merge 1 commits from publication-page into main
pull from: publication-page
merge into: data-catalog-services:main
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docs/ingestorManual.md
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## Publish
As part of a publication workflow datasets must become citable via a
digital object identifier (DOI). This assignment is done as part of
the publication workflow described below. The publication then can
link to these published datasets using this DOI. The DOIs can link to
both raw and/or derived datasets. The published data and therefore the
DOI ususally refers to a **set** of Datasets, thus avoiding the need to
list potentially thousands of individual dataset identifiers in a
journal publication.
You publish data in the following way: go to <https://discovery.psi.ch> ,
login and select all the datasets, that you want to publish under a
new DOI.
![Selecting Datasets to be published](assets/images//screenshots/PublishingData1.png "Selecting Datasets to be published")
Then you add these datasest a a "shopping cart" by using the "add to
Cart" button. You can repeat this often as needed. Once finished with
the selection you can "check out" the cart (click on the cart in the
top bar) and pick the "Publish" action.
![Check out cart](assets/images//screenshots/PublishingData2.png "Check out cart")
This opens a form. The image below contains all fields that are mandatory and must be filled.
![Defining metadata of published data](assets/images//screenshots/PublishingData3.png "Defining metadata of published data")
By clicking on "Save and Continue" and later on "Publish"
(makes the data publicly available) defines the data as to
be published and makes it known to the data catalog, but
the corresponding DOI is not yet made globally available.
For this last step to happen, someone with access to this
newly generated published data definition (e.g. the person defining
the published data or e.g. the PI) has to hit the "register"
button. This will trigger the global publication of the DOI. The links
on <https://doi.org> are usually updated within one day, so wait one day
before following these links or searching for the doi via the doi
resolver.
All published data definitions are then openly available via the so
called "Landing Pages", which are hosted on <https://doi.psi.ch> .
For now all publication are triggered by a scientist explicitly,
whenever necessary. In future in addition an automated publication
after the embargo period (default 3 years after data taking) will be
implemented (details to be defined)
See the dedicated page [Publish Datasets with a DOI](publishing.md).
## Cleanup and Retention
docs/publishing.md
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---
title: Publish Datasets with a DOI
---
As part of a publication workflow datasets must become citable via a
digital object identifier (DOI). This assignment is done as part of
the publication workflow described below. The publication then can
link to these published datasets using this DOI. The DOIs can link to
both raw and/or derived datasets. The published data and therefore the
DOI ususally refers to a **set** of Datasets, thus avoiding the need to
list potentially thousands of individual dataset identifiers in a
journal publication.
You publish data in the following way: go to <https://discovery.psi.ch> ,
login and select all the datasets, that you want to publish under a
new DOI.
![Selecting Datasets to be published](assets/images//screenshots/PublishingData1.png "Selecting Datasets to be published")
Then you add these datasest a a "shopping cart" by using the "add to
Cart" button. You can repeat this often as needed. Once finished with
the selection you can "check out" the cart (click on the cart in the
top bar) and pick the "Publish" action.
![Check out cart](assets/images//screenshots/PublishingData2.png "Check out cart")
This opens a form. The image below contains all fields that are mandatory and must be filled.
![Defining metadata of published data](assets/images//screenshots/PublishingData3.png "Defining metadata of published data")
By clicking on "Save and Continue" and later on "Publish"
(makes the data publicly available) defines the data as to
be published and makes it known to the data catalog, but
the corresponding DOI is not yet made globally available.
For this last step to happen, someone with access to this
newly generated published data definition (e.g. the person defining
the published data or e.g. the PI) has to hit the "register"
button. This will trigger the global publication of the DOI. The links
on <https://doi.org> are usually updated within one day, so wait one day
before following these links or searching for the doi via the doi
resolver.
All published data definitions are then openly available via the so
called "Landing Pages", which are hosted on <https://doi.psi.ch> .
For now all publication are triggered by a scientist explicitly,
whenever necessary. In future in addition an automated publication
after the embargo period (default 3 years after data taking) will be
implemented (details to be defined)
mkdocs.yml
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@@ -52,4 +52,6 @@ theme:
nav:
- index.md
- gettingStarted.md
- ingestorManual.md
- Ingestor Manual:
- ingestorManual.md
- publishing.md