 Abe Levitan
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99d02f95cf
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Finish fleshing out the examples
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2019-09-04 18:23:34 -04:00 |
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Abe Levitan
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0377ea90be
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Update README to account for presence of docs
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2019-09-04 16:45:04 -04:00 |
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Abe Levitan
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5b521da557
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Add the publishing script so we can publish the docs to github pages on the enterprise server
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2019-09-04 16:37:30 -04:00 |
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Abe Levitan
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e80bf05f25
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Further improve docs layout and add unfinished ptycho models to repo
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2019-09-04 16:27:55 -04:00 |
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Abe Levitan
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de186592cb
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Update the docstrings on all the tools files and start laying out the docs for real
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2019-09-03 18:49:45 -04:00 |
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Abe Levitan
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1e3a98c599
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Add and build tests for a Fourier Ring Correlation method
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2019-08-17 10:39:35 -04:00 |
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Abe Levitan
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d2c07bf1ac
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Add a tool to look at raw data
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2019-08-15 12:16:43 -04:00 |
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Abe Levitan
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f769806e68
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Lots of small changes
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2019-08-15 11:14:20 -04:00 |
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Abe Levitan
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06ce14fac9
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Fixed a small bug
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2019-07-01 15:27:57 -04:00 |
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Abe Levitan
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fe1f4db0c6
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Consistently get Bragg/specular geometry implemented across both models/datasets and dataloaders
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2019-07-01 15:02:14 -04:00 |
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Abraham Levitan
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bf3e206bd9
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Update the setup file and readme to have sane installation instructions
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2019-06-28 23:48:39 -04:00 |
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Abe Levitan
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6b50e41614
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Add some sensible examples
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2019-06-28 16:01:53 -04:00 |
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Abe Levitan
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a2a07055c4
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Add sim-to-dataset capability
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2019-06-27 17:26:36 -04:00 |
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Abe Levitan
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f769f9e7ab
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Start moving the example code to datasets which can fit on the git server
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2019-06-26 17:47:09 -04:00 |
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Abe Levitan
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c246a5ed96
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Added a diffraction pattern browser
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2019-06-26 17:26:25 -04:00 |
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Abe Levitan
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c437f95a8e
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Loveplotting!
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2019-06-26 13:25:54 -04:00 |
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Abe Levitan
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8dc997ac4c
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Change the way plots are defined for inspect in preparation for adding liveplotting
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2019-06-26 12:24:13 -04:00 |
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Abe Levitan
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a09cd4b39e
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Add ability to load/use Bragg geometry ptycho data, also add a 1D convolve to try with the terrible data from CSX
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2019-05-22 20:20:43 -04:00 |
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Abe Levitan
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6471a17c34
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Merge branch 'master' of github.mit.edu:Scattering/CDTools
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2019-05-22 13:00:56 -04:00 |
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Abe Levitan
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2a2b6ee960
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Add tool to restrict object support, plot a nanomap, and include mask on SHARP-style initialization
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2019-05-22 13:00:52 -04:00 |
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Maddie Cain
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57f353b1e1
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Merge branch 'master' of github.mit.edu:Scattering/CDTools
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2019-05-15 12:44:15 -04:00 |
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Maddie Cain
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a65a3867c0
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ensure basis vectors are in the right wrong format
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2019-05-15 12:43:40 -04:00 |
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Maddie Cain
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e7c0e4771c
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generate diffraction data with errors added for debugging on gpu
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2019-05-14 01:38:15 -04:00 |
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Maddie Cain
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4896d7354a
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fixed ePIE bug and shortened inspect function
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2019-05-12 22:58:37 -04:00 |
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Abe Levitan
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22899288fc
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Add probe propagation with initialization as a base feature to fancy_ptycho, and fix the test for orthogonalize_probes
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2019-05-03 12:30:53 -04:00 |
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Abe Levitan
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26de79ca92
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Include ability to read background from a .cxi file and include it in SHARP-style initialization
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2019-04-25 16:06:59 -04:00 |
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Abe Levitan
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d0a56c2d99
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Adding catch-all plotting tools and saving tools to models
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2019-04-25 15:46:36 -04:00 |
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Abe Levitan
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1104f338d1
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Test the synthesize image functionality
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2019-04-25 13:53:35 -04:00 |
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Abe Levitan
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bc9c1c466c
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Refactor the PRTF calculation, fix a small bug creating a slight offset in the frequency labels, and write a test
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2019-04-25 13:32:37 -04:00 |
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Abe Levitan
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9a35d44689
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Update the standardization to work with incoherent probes and move over the synthesis
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2019-04-24 22:01:09 -04:00 |
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Abe Levitan
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374683fe35
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Move the standardizing tool over to analysis and write a test for it
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2019-04-24 19:23:51 -04:00 |
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Abe Levitan
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75b257f816
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Add a reverse tool to calculate translations from pixel space offsets
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2019-04-24 15:51:28 -04:00 |
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Abe Levitan
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6035841874
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Merge branch 'master' of github.mit.edu:Scattering/CDTools
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2019-04-24 15:29:15 -04:00 |
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Abe Levitan
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d4576d1939
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Write up the tests and fix a bug in the probe orthogonalization
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2019-04-24 15:29:07 -04:00 |
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Maddie Cain
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84ac2cc058
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added ePIE
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2019-04-24 12:26:32 -04:00 |
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Maddie Cain
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fcf17d9355
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Merge branch 'master' of github.mit.edu:Scattering/CDTools
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2019-04-24 12:25:42 -04:00 |
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Abe Levitan
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bfaf2bf3ac
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Add a tool for loading dark images from cxi files
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2019-04-24 11:29:49 -04:00 |
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Abe Levitan
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34cf555a3c
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Fix an inconsistency in the incoherent sum measurement and update the test
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2019-04-24 11:13:13 -04:00 |
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Maddie Cain
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6a670a82af
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untested ptychography work
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2019-04-24 09:06:50 -04:00 |
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Abe Levitan
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bf8dbe086a
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Add the frantic work over the past few weeks, next challenge is to organize and test it
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2019-04-23 14:50:16 -04:00 |
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Maddie Cain
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2a717d9133
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fixed bug in centroid and began adding to simple_ptycho
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2019-04-18 01:01:37 -04:00 |
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Abe Levitan
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ace81cc66d
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Add tools to calculate subpixel shifts. Possible improvements still on the table
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2019-04-10 12:20:39 -04:00 |
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Abe Levitan
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91f11643e9
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Make some tweaks to the simple ptycho model
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2019-04-10 10:25:05 -04:00 |
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Maddie Cain
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168096abbe
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added 1d scatter plot and test
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2019-04-08 04:03:15 -04:00 |
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Maddie Cain
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e76b18b38f
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Merge branch 'master' of github.mit.edu:Scattering/CDTools
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2019-04-08 03:56:41 -04:00 |
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Maddie Cain
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8aeb25bb41
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added plotting capabilities and tests (note: no colorbar yet for colorized plt)
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2019-04-08 03:56:23 -04:00 |
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Abe Levitan
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63c55582ec
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First pass at models, including the model for classic Ptychography
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2019-04-05 16:41:21 -04:00 |
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Abe Levitan
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d0897f1dff
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Add skeleton for centroid functions
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2019-04-05 10:19:39 -04:00 |
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Abe Levitan
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f1ed810514
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Add a SHARP style probe guess functionality
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2019-04-04 23:26:36 -04:00 |
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Abe Levitan
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fdd100cd1c
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Finish building and testing the gaussian probe guess from a dataset
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2019-04-04 17:03:23 -04:00 |
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