Update the example near field ptycho code to use Poisson NLL

examples/near_field_ptycho.py

@@ -26,7 +26,8 @@ model = cdtools.models.FancyPtycho.from_dataset(
     near_field=True,
     propagation_distance=3.65e-3, # 3.65 downstream from focus
     units='um', # Set the units for the live plots
-    obj_view_crop=-35,
+    obj_view_crop=-35, # Expand the view for the live plots
+    loss="poisson_nll", # Best option for photon-counting detectors
     panel_plot_mode=True, # Set to False to get individual figures
 )
 

tests/models/test_fancy_ptycho.py

@@ -138,11 +138,8 @@ def test_near_field_ptycho(near_field_ptycho_cxi, reconstruction_device, show_pl
         n_modes=1,
         near_field=True,
         propagation_distance=3.65e-3, # 3.65 downstream from focus
-<<<<<<< HEAD
         panel_plot_mode=False, # test without panel plot mode
-=======
         loss='poisson_nll',
->>>>>>> f0f1577 (Add loss function coverage to slow reconstruction tests)
     )
 
     print('Running reconstruction on provided reconstruction_device,',