refactor: commented code removed

csaxs_bec/bec_ipython_client/plugins/flomni/flomni.py

@@ -975,36 +975,49 @@ class FlomniAlignmentMixin:
         use_vertical_default_values=True,
     ):
         """
-        Read the alignment offset from the given directory and set the global parameter
-        tomo_alignment_fit.
+        Read the alignment parameters from xray eye fit.
 
-        Args:
-            dir_path (str, optional): The directory to read the alignment offset from. Defaults to os.path.expanduser("~/Data10/specES1/internal/").
         """
         tomo_alignment_fit = np.zeros((2, 5))
-        with open(os.path.join(dir_path, "ptychotomoalign_Ax.txt"), "r") as file:
-            tomo_alignment_fit[0][0] = file.readline()
+        # with open(os.path.join(dir_path, "ptychotomoalign_Ax.txt"), "r") as file:
+        #     tomo_alignment_fit[0][0] = file.readline()
 
-        with open(os.path.join(dir_path, "ptychotomoalign_Bx.txt"), "r") as file:
-            tomo_alignment_fit[0][1] = file.readline()
+        # with open(os.path.join(dir_path, "ptychotomoalign_Bx.txt"), "r") as file:
+        #     tomo_alignment_fit[0][1] = file.readline()
 
-        with open(os.path.join(dir_path, "ptychotomoalign_Cx.txt"), "r") as file:
-            tomo_alignment_fit[0][2] = file.readline()
+        # with open(os.path.join(dir_path, "ptychotomoalign_Cx.txt"), "r") as file:
+        #     tomo_alignment_fit[0][2] = file.readline()
 
-        with open(os.path.join(dir_path, "ptychotomoalign_Ay.txt"), "r") as file:
-            tomo_alignment_fit[1][0] = file.readline()
+        # with open(os.path.join(dir_path, "ptychotomoalign_Ay.txt"), "r") as file:
+        #     tomo_alignment_fit[1][0] = file.readline()
 
-        with open(os.path.join(dir_path, "ptychotomoalign_By.txt"), "r") as file:
-            tomo_alignment_fit[1][1] = file.readline()
+        # with open(os.path.join(dir_path, "ptychotomoalign_By.txt"), "r") as file:
+        #     tomo_alignment_fit[1][1] = file.readline()
 
-        with open(os.path.join(dir_path, "ptychotomoalign_Cy.txt"), "r") as file:
-            tomo_alignment_fit[1][2] = file.readline()
+        # with open(os.path.join(dir_path, "ptychotomoalign_Cy.txt"), "r") as file:
+        #     tomo_alignment_fit[1][2] = file.readline()
 
-        with open(os.path.join(dir_path, "ptychotomoalign_Ay3.txt"), "r") as file:
-            tomo_alignment_fit[1][3] = file.readline()
+        # with open(os.path.join(dir_path, "ptychotomoalign_Ay3.txt"), "r") as file:
+        #     tomo_alignment_fit[1][3] = file.readline()
+
+        # with open(os.path.join(dir_path, "ptychotomoalign_Cy3.txt"), "r") as file:
+        #     tomo_alignment_fit[1][4] = file.readline()
+
+        params = dev.omny_xray_gui.fit_params_x.get()
+
+        #amplitude
+        tomo_alignment_fit[0][0] = params['SineModel_0_amplitude']
+        #phase
+        tomo_alignment_fit[0][1] = params['SineModel_0_shift']
+        #offset
+        tomo_alignment_fit[0][2] = params['LinearModel_1_intercept']
+        print("applying vertical default values from mirror calibration, not from fit!")
+        tomo_alignment_fit[1][0] = 0
+        tomo_alignment_fit[1][1] = 0
+        tomo_alignment_fit[1][2] = 0
+        tomo_alignment_fit[1][3] = 0
+        tomo_alignment_fit[1][4] = 0
 
-        with open(os.path.join(dir_path, "ptychotomoalign_Cy3.txt"), "r") as file:
-            tomo_alignment_fit[1][4] = file.readline()
 
         print("New alignment parameters loaded:")
         print(

csaxs_bec/bec_ipython_client/plugins/flomni/gui_tools.py

@@ -1,7 +1,5 @@
 import builtins
 
-from bec_widgets.cli.client import BECDockArea
-
 # from csaxs_bec.bec_ipython_client.plugins.cSAXS import epics_get, epics_put, fshopen, fshclose
 
 if builtins.__dict__.get("bec") is not None:
@@ -9,6 +7,7 @@ if builtins.__dict__.get("bec") is not None:
     dev = builtins.__dict__.get("dev")
     scans = builtins.__dict__.get("scans")
 
+
 def umv(*args):
     return scans.umv(*args, relative=False)
 
@@ -29,7 +28,7 @@ class flomniGuiTools:
 
     def flomnigui_show_gui(self):
         if "flomni" in self.gui.windows:
-            self.gui.flomni.show()
+            self.gui.flomni.raise_window()
         else:
             self.gui.new("flomni")
 
@@ -39,39 +38,38 @@ class flomniGuiTools:
     def flomnigui_raise(self):
         self.gui.flomni.raise_window()
 
-    # def flomnigui_show_xeyealign(self):
-    #     self.flomnigui_show_gui()
-    #     if self.xeyegui is None:
-    #         self.flomnigui_remove_all_docks()
-    #         self.xeyegui = self.gui.flomni.new("xeyegui").new("XRayEye")
-    #         # start live
-    #         if not dev.cam_xeye.live_mode:
-    #             dev.cam_xeye.live_mode = True
-
     def flomnigui_show_xeyealign(self):
         self.flomnigui_show_gui()
         if self._flomnigui_check_attribute_not_exists("xeyegui"):
             self.flomnigui_remove_all_docks()
-            self.xeyegui = self.gui.flomni.new("xeyegui").new("XRayEye")
-            # start live
-            if not dev.cam_xeye.live_mode:
-                dev.cam_xeye.live_mode = True
+            self.xeyegui = self.gui.flomni.new("XRayEye", object_name="xrayeye")
+        # start live
+        if not dev.cam_xeye.live_mode_enabled.get():
+            dev.cam_xeye.live_mode_enabled.put(True)
+        self.xeyegui.switch_tab("alignment")
 
+    def flomnigui_show_xeyealign_fittab(self):
+        self.flomnigui_show_gui()
+        if self._flomnigui_check_attribute_not_exists("xeyegui"):
+            self.flomnigui_remove_all_docks()
+            self.xeyegui = self.gui.flomni.new("XRayEye")
+        self.xeyegui.switch_tab("fit")
 
     def _flomnigui_check_attribute_not_exists(self, attribute_name):
-        if hasattr(self.gui,"flomni"):
-            if hasattr(self.gui.flomni,attribute_name):
+        if hasattr(self.gui, "flomni"):
+            if hasattr(self.gui.flomni, attribute_name):
                 return False
         return True
 
-
     def flomnigui_show_cameras(self):
         self.flomnigui_show_gui()
-        if self._flomnigui_check_attribute_not_exists("camera_gripper") or self._flomnigui_check_attribute_not_exists("camera_overview"):
+        if self._flomnigui_check_attribute_not_exists(
+            "camera_gripper"
+        ) or self._flomnigui_check_attribute_not_exists("camera_overview"):
             self.flomnigui_remove_all_docks()
-            camera_gripper_image = self.gui.flomni.new("camera_gripper").new("Image")
+            camera_gripper_image = self.gui.flomni.new("Image")
             if self._flomnicam_check_device_exists(dev.cam_flomni_gripper):
-                camera_gripper_image.image(("cam_flomni_gripper", "preview"))
+                camera_gripper_image.image(device="cam_flomni_gripper", signal="preview")
                 camera_gripper_image.lock_aspect_ratio = True
                 camera_gripper_image.enable_fps_monitor = True
                 camera_gripper_image.enable_toolbar = False
@@ -80,9 +78,9 @@ class flomniGuiTools:
                 dev.cam_flomni_gripper.start_live_mode()
             else:
                 print("Cannot open camera_gripper. Device does not exist.")
-            camera_overview_image = self.gui.flomni.new("camera_overview").new("Image")
+            camera_overview_image = self.gui.flomni.new("Image")
             if self._flomnicam_check_device_exists(dev.cam_flomni_overview):
-                camera_overview_image.image(("cam_flomni_overview", "preview"))
+                camera_overview_image.image(device="cam_flomni_overview", signal="preview")
                 camera_overview_image.lock_aspect_ratio = True
                 camera_overview_image.enable_fps_monitor = True
                 camera_overview_image.enable_toolbar = False
@@ -93,10 +91,10 @@ class flomniGuiTools:
                 print("Cannot open camera_overview. Device does not exist.")
 
     def flomnigui_remove_all_docks(self):
-        #dev.cam_flomni_overview.stop_live_mode()
-        #dev.cam_flomni_gripper.stop_live_mode()
-        #dev.cam_xeye.live_mode = False
-        self.gui.flomni.delete_all() 
+        # dev.cam_flomni_overview.stop_live_mode()
+        # dev.cam_flomni_gripper.stop_live_mode()
+        # dev.cam_xeye.live_mode = False
+        self.gui.flomni.delete_all()
         self.progressbar = None
         self.text_box = None
 
@@ -104,7 +102,7 @@ class flomniGuiTools:
         self.flomnigui_show_gui()
         if self._flomnigui_check_attribute_not_exists("idle_text_box"):
             self.flomnigui_remove_all_docks()
-            idle_text_box = self.gui.flomni.new("idle_textbox").new("TextBox")
+            idle_text_box = self.gui.flomni.new("TextBox")
         text = (
             "<pre>"
             + " ,---.,--. ,-----. ,--.   ,--.,--.  ,--.,--. \n"
@@ -120,13 +118,12 @@ class flomniGuiTools:
         import csaxs_bec
         from pathlib import Path
 
-        print("The general flOMNI documentation is at \nhttps://sls-csaxs.readthedocs.io/en/latest/user/ptychography/flomni.html#user-ptychography-flomni")
+        print(
+            "The general flOMNI documentation is at \nhttps://sls-csaxs.readthedocs.io/en/latest/user/ptychography/flomni.html#user-ptychography-flomni"
+        )
 
         csaxs_bec_basepath = Path(csaxs_bec.__file__).parent
-        docs_folder = (
-            csaxs_bec_basepath /
-            "bec_ipython_client" / "plugins" / "flomni" / "docs"
-        )
+        docs_folder = csaxs_bec_basepath / "bec_ipython_client" / "plugins" / "flomni" / "docs"
 
         if not docs_folder.is_dir():
             raise NotADirectoryError(f"Docs folder not found: {docs_folder}")
@@ -164,10 +161,9 @@ class flomniGuiTools:
             self.pdf_viewer = self.gui.flomni.new(widget="PdfViewerWidget")
 
         # --- Load PDF ---------------------------------------------------------
-        self.pdf_viewer.PdfViewerWidget.load_pdf(str(pdf_file.resolve()))
+        self.pdf_viewer.load_pdf(str(pdf_file.resolve()))
         print(f"\nLoaded: {pdf_file.name}\n")
 
-
     def _flomnicam_check_device_exists(self, device):
         try:
             device
@@ -181,26 +177,18 @@ class flomniGuiTools:
         if self._flomnigui_check_attribute_not_exists("progressbar"):
             self.flomnigui_remove_all_docks()
             # Add a new dock with a RingProgressBar widget
-            self.progressbar = self.gui.flomni.new("progressbar").new("RingProgressBar")
-            # Customize the size of the progress ring
-            self.progressbar.set_line_widths(20)
-            # Disable automatic updates and manually set the self.progressbar value
-            self.progressbar.enable_auto_updates(False)
-            # Set precision for the self.progressbar display
-            self.progressbar.set_precision(1)  # Display self.progressbar with one decimal places
-            # Setting multiple rigns with different values
-            self.progressbar.set_number_of_bars(3)
-            self.progressbar.rings[0].set_update("manual")
-            self.progressbar.rings[1].set_update("manual")
-            self.progressbar.rings[2].set_update("scan")
-            # Set the values of the rings to 50, 75, and 25 from outer to inner ring
-            # self.progressbar.set_value([50, 75])
-            # Add a new dock with a TextBox widget
-            self.text_box = self.gui.flomni.new(name="progress_text").new("TextBox")
+            self.progressbar = self.gui.flomni.new("RingProgressBar")
+
+            # Setting multiple rings with different values
+            self.progressbar.add_ring().set_update("manual")
+            self.progressbar.add_ring().set_update("manual")
+            self.progressbar.add_ring().set_update("scan")
 
         self._flomnigui_update_progress()
 
     def _flomnigui_update_progress(self):
+        main_progress_ring = self.progressbar.rings[0]
+        subtomo_progress_ring = self.progressbar.rings[1]
         if self.progressbar is not None:
             progress = self.progress["projection"] / self.progress["total_projections"] * 100
             subtomo_progress = (
@@ -208,10 +196,11 @@ class flomniGuiTools:
                 / self.progress["subtomo_total_projections"]
                 * 100
             )
-            self.progressbar.set_value([progress, subtomo_progress, 0])
-            if self.text_box is not None:
-                text = f"Progress report:\n Tomo type: ....................... {self.progress['tomo_type']}\n Projection: ...................... {self.progress['projection']:.0f}\n Total projections expected ....... {self.progress['total_projections']}\n Angle: ........................... {self.progress['angle']}\n Current subtomo: ................. {self.progress['subtomo']}\n Current projection within subtomo: {self.progress['subtomo_projection']}\n Total projections per subtomo: ... {self.progress['subtomo_total_projections']}"
-                self.text_box.set_plain_text(text)
+            main_progress_ring.set_value(progress)
+            subtomo_progress_ring.set_value(subtomo_progress)
+
+            text = f"Progress report:\n Tomo type: ....................... {self.progress['tomo_type']}\n Projection: ...................... {self.progress['projection']:.0f}\n Total projections expected ....... {self.progress['total_projections']}\n Angle: ........................... {self.progress['angle']}\n Current subtomo: ................. {self.progress['subtomo']}\n Current projection within subtomo: {self.progress['subtomo_projection']}\n Total projections per subtomo: ... {self.progress['subtomo_total_projections']}"
+            self.progressbar.set_center_label(text)
 
 
 if __name__ == "__main__":
@@ -222,6 +211,7 @@ if __name__ == "__main__":
     client.start()
     client.gui = BECGuiClient()
 
-    flomni_gui = flomniGuiTools(client)
+    flomni_gui = flomniGuiTools()
+    flomni_gui.set_client(client)
     flomni_gui.flomnigui_show_gui()
     flomni_gui.flomnigui_show_progress()

csaxs_bec/bec_ipython_client/plugins/flomni/x_ray_eye_align.py

@@ -5,9 +5,11 @@ import os
 import time
 from typing import TYPE_CHECKING
 
+import numpy as np
+
 from bec_lib import bec_logger
 
-from csaxs_bec.bec_ipython_client.plugins.cSAXS import epics_get, epics_put, fshopen, fshclose
+# from csaxs_bec.bec_ipython_client.plugins.cSAXS import epics_get, epics_put, fshopen, fshclose
 
 logger = bec_logger.logger
 # import builtins to avoid linter errors
@@ -15,16 +17,18 @@ bec = builtins.__dict__.get("bec")
 dev = builtins.__dict__.get("dev")
 scans = builtins.__dict__.get("scans")
 
+
 def umv(*args):
     return scans.umv(*args, relative=False)
 
+
 if TYPE_CHECKING:
     from bec_ipython_client.plugins.flomni import Flomni
 
 
 class XrayEyeAlign:
     # pixel calibration, multiply to get mm
-    labview=False
+    test_wo_movements = True
     PIXEL_CALIBRATION = 0.1 / 113  # .2 with binning
 
     def __init__(self, client, flomni: Flomni) -> None:
@@ -36,209 +40,190 @@ class XrayEyeAlign:
         self.flomni.reset_correction()
         self.flomni.reset_tomo_alignment_fit()
 
+    @property
+    def gui(self):
+        return self.flomni.xeyegui
+
     def _reset_init_values(self):
         self.shift_xy = [0, 0]
         self._xray_fov_xy = [0, 0]
 
-    def save_frame(self):
-        epics_put("XOMNYI-XEYE-SAVFRAME:0", 1)
+    def update_frame(self, keep_shutter_open=False):
 
-    def update_frame(self,keep_shutter_open=False):
-        if self.labview:
-            epics_put("XOMNYI-XEYE-ACQDONE:0", 0)
-            
-        if not self.labview:
-            self.flomni.flomnigui_show_xeyealign()
-            if not dev.cam_xeye.live_mode:
-                dev.cam_xeye.live_mode = True
+        if not dev.cam_xeye.live_mode_enabled.get():
+            dev.cam_xeye.live_mode_enabled.put(True)
 
-        epics_put("XOMNYI-XEYE-ACQ:0", 1)
-        if self.labview:
-            # wait for start live
-            while epics_get("XOMNYI-XEYE-ACQDONE:0") == 0:
-                time.sleep(0.5)
-                print("waiting for live view to start...")
+        self.gui.on_live_view_enabled(True)
 
-        fshopen()
-
-        if self.labview:
-            epics_put("XOMNYI-XEYE-ACQDONE:0", 0)
-
-            while epics_get("XOMNYI-XEYE-ACQDONE:0") == 0:
-                print("waiting for new frame...")
-                time.sleep(0.5)
+        dev.omnyfsh.fshopen()
 
         time.sleep(0.5)
         # stop live view
         if not keep_shutter_open:
-            epics_put("XOMNYI-XEYE-ACQ:0", 0)
+            self.gui.on_live_view_enabled(False)
             time.sleep(0.1)
-            fshclose()
-            print("got new frame")
+            dev.omnyfsh.fshclose()
+            print("Received new frame.")
         else:
             print("Staying in live view, shutter is and remains open!")
 
     def tomo_rotate(self, val: float):
-        # pylint: disable=undefined-variable
-        umv(self.device_manager.devices.fsamroy, val)
+        if not self.test_wo_movements:
+            umv(self.device_manager.devices.fsamroy, val)
 
     def get_tomo_angle(self):
         return self.device_manager.devices.fsamroy.readback.get()
 
     def update_fov(self, k: int):
-        self._xray_fov_xy[0] = max(epics_get(f"XOMNYI-XEYE-XWIDTH_X:{k}"), self._xray_fov_xy[0])
-        self._xray_fov_xy[1] = max(0, self._xray_fov_xy[0])
+        self._xray_fov_xy[0] = max(
+            getattr(dev.omny_xray_gui, f"width_x_{k}").get(), self._xray_fov_xy[0]
+        )
+        self._xray_fov_xy[1] = max(
+            getattr(dev.omny_xray_gui, f"width_y_{k}").get(), self._xray_fov_xy[1]
+        )
 
-    @property
-    def movement_buttons_enabled(self):
-        return [epics_get("XOMNYI-XEYE-ENAMVX:0"), epics_get("XOMNYI-XEYE-ENAMVY:0")]
-
-    @movement_buttons_enabled.setter
-    def movement_buttons_enabled(self, enabled: bool):
-        enabled = int(enabled)
-        epics_put("XOMNYI-XEYE-ENAMVX:0", enabled)
-        epics_put("XOMNYI-XEYE-ENAMVY:0", enabled)
+    def movement_buttons_enabled(self, enablex: bool, enabley: bool):
+        self.gui.on_motors_enable(enablex, enabley)
 
     def send_message(self, msg: str):
-        epics_put("XOMNYI-XEYE-MESSAGE:0.DESC", msg)
+        print(f"In alginment GUI: {msg}")
+        self.gui.user_message = msg
 
-    def align(self,keep_shutter_open=False):
+    def align(self, keep_shutter_open=False):
+        self.flomni.flomnigui_show_xeyealign()
         if not keep_shutter_open:
-            print("This routine can be called with paramter keep_shutter_open=True to keep the shutter always open")
+            print(
+                "This routine can be called with paramter keep_shutter_open=True to keep the shutter always open"
+            )
         self.send_message("Getting things ready. Please wait...")
 
-        #potential unresolved movement requests to zero
-        epics_put("XOMNYI-XEYE-MVX:0", 0)
-        epics_put("XOMNYI-XEYE-MVY:0", 0)
+        self.gui.enable_submit_button(False)
+
+        # Initialize xray align device
+        # clear potential pending movement requests
+        dev.omny_xray_gui.mvx.set(0)
+        dev.omny_xray_gui.mvy.set(0)
+        # reset submit channel
+        dev.omny_xray_gui.submit.set(0)
+
+        self.movement_buttons_enabled(False, False)
 
         # reset shift xy and fov params
         self._reset_init_values()
 
         self.flomni.lights_off()
 
-        self.flomni.flomnigui_show_xeyealign()
-        self.flomni.flomnigui_raise()
+        if not self.test_wo_movements:
+            self.tomo_rotate(0)
 
-        self.tomo_rotate(0)
-        epics_put("XOMNYI-XEYE-ANGLE:0", 0)
-
-        self.flomni.feye_in()
+            self.flomni.feye_in()
 
         self.flomni.laser_tracker_on()
 
         self.flomni.feedback_enable_with_reset()
 
         # disable movement buttons
-        self.movement_buttons_enabled = False
+        self.movement_buttons_enabled(False, False)
 
         sample_name = self.flomni.sample_get_name(0)
-        epics_put("XOMNYI-XEYE-SAMPLENAME:0.DESC", sample_name)
+        self.gui.sample_name = sample_name
 
         # this makes sure we are in a defined state
         self.flomni.feedback_disable()
 
-        epics_put("XOMNYI-XEYE-PIXELSIZE:0", self.PIXEL_CALIBRATION)
+        if not self.test_wo_movements:
+            self.flomni.fosa_out()
 
-        self.flomni.fosa_out()
+            fsamx_in = self.flomni._get_user_param_safe("fsamx", "in")
+            umv(dev.fsamx, fsamx_in - 0.25)
 
-        fsamx_in = self.flomni._get_user_param_safe("fsamx", "in")
-        umv(dev.fsamx, fsamx_in - 0.25)
+            self.flomni.ffzp_in()
 
-        self.flomni.ffzp_in()
         self.update_frame(keep_shutter_open)
 
-        # enable submit buttons
-        self.movement_buttons_enabled = False
-        epics_put("XOMNYI-XEYE-SUBMIT:0", 0)
-        epics_put("XOMNYI-XEYE-STEP:0", 0)
+        self.gui.enable_submit_button(True)
+        dev.omny_xray_gui.step.set(0).wait()
         self.send_message("Submit center value of FZP.")
 
         k = 0
         while True:
-            if epics_get("XOMNYI-XEYE-SUBMIT:0") == 1:
-                val_x = epics_get(f"XOMNYI-XEYE-XVAL_X:{k}") / 2 * self.PIXEL_CALIBRATION  # in mm
-                self.alignment_values[k] = val_x
+            if dev.omny_xray_gui.submit.get() == 1:
+
+                self.alignment_values[k] = (
+                    getattr(dev.omny_xray_gui, f"xval_x_{k}").get() / 2 * self.PIXEL_CALIBRATION
+                )  # in mm
                 print(f"Clicked position {k}: x {self.alignment_values[k]}")
                 rtx_position = dev.rtx.readback.get() / 1000
                 print(f"Current rtx position {rtx_position}")
                 self.alignment_values[k] -= rtx_position
                 print(f"Corrected position {k}: x {self.alignment_values[k]}")
-
+                # reset submit channel
+                dev.omny_xray_gui.submit.set(0)
                 if k == 0:  # received center value of FZP
                     self.send_message("please wait ...")
-                    self.movement_buttons_enabled = False
-                    epics_put("XOMNYI-XEYE-SUBMIT:0", -1)  # disable submit button
+                    self.movement_buttons_enabled(False, False)
+                    self.gui.enable_submit_button(False)
 
                     self.flomni.feedback_disable()
-                    fsamx_in = self.flomni._get_user_param_safe("fsamx", "in")
-                    umv(dev.fsamx, fsamx_in)
+                    if not self.test_wo_movements:
+                        fsamx_in = self.flomni._get_user_param_safe("fsamx", "in")
+                        umv(dev.fsamx, fsamx_in)
 
-                    self.flomni.foptics_out()
+                        self.flomni.foptics_out()
 
-                    self.flomni.feedback_disable()
-                    umv(dev.fsamx, fsamx_in - 0.25)
+                        time.sleep(0.5)
 
-                    if self.labview:
-                        self.update_frame(keep_shutter_open)
-                        epics_put("XOMNYI-XEYE-RECBG:0", 1)
-                        while epics_get("XOMNYI-XEYE-RECBG:0") == 1:
-                            time.sleep(0.5)
-                            print("waiting for background frame...")
-
-                    umv(dev.fsamx, fsamx_in)
-                    time.sleep(0.5)
                     self.flomni.feedback_enable_with_reset()
 
                     self.update_frame(keep_shutter_open)
-                    self.send_message("Adjust sample height and submit center")
-                    epics_put("XOMNYI-XEYE-SUBMIT:0", 0)
-                    self.movement_buttons_enabled = True
+                    self.send_message("Step 1/5: Adjust sample height and submit center")
+                    self.gui.enable_submit_button(True)
+                    self.movement_buttons_enabled(True, True)
 
                 elif 1 <= k < 5:  # received sample center value at samroy 0 ... 315
                     self.send_message("please wait ...")
-                    epics_put("XOMNYI-XEYE-SUBMIT:0", -1)
-                    self.movement_buttons_enabled = False
+                    self.gui.enable_submit_button(False)
+                    self.movement_buttons_enabled(False, False)
 
                     umv(dev.rtx, 0)
                     self.tomo_rotate(k * 45)
-                    epics_put("XOMNYI-XEYE-ANGLE:0", self.get_tomo_angle())
+                    dev.omny_xray_gui.angle.set(self.get_tomo_angle())
                     self.update_frame(keep_shutter_open)
-                    self.send_message("Submit sample center")
-                    epics_put("XOMNYI-XEYE-SUBMIT:0", 0)
-                    epics_put("XOMNYI-XEYE-ENAMVX:0", 1)
+                    self.send_message(f"Step {k+1}/5: Submit sample center")
+                    self.gui.enable_submit_button(True)
+                    self.movement_buttons_enabled(True, False)
                     self.update_fov(k)
 
                 elif k == 5:  # received sample center value at samroy 270 and done
                     self.send_message("done...")
-                    epics_put("XOMNYI-XEYE-SUBMIT:0", -1)  # disable submit button
-                    self.movement_buttons_enabled = False
+                    self.gui.enable_submit_button(False)
+                    self.movement_buttons_enabled(False, False)
                     self.update_fov(k)
                     break
 
                 k += 1
-                epics_put("XOMNYI-XEYE-STEP:0", k)
+                dev.omny_xray_gui.step.set(k)
 
-            _xrayeyalignmvx = epics_get("XOMNYI-XEYE-MVX:0")
+            _xrayeyalignmvx = dev.omny_xray_gui.mvx.get()
             if _xrayeyalignmvx != 0:
                 umvr(dev.rtx, _xrayeyalignmvx)
                 print(f"Current rtx position {dev.rtx.readback.get() / 1000}")
-                epics_put("XOMNYI-XEYE-MVX:0", 0)
-                if k > 0:
-                    epics_put(f"XOMNYI-XEYE-STAGEPOSX:{k}", dev.rtx.readback.get() / 1000)
                 time.sleep(3)
+                dev.omny_xray_gui.mvx.set(0)
                 self.update_frame(keep_shutter_open)
 
             if k < 2:
                 # allow movements, store movements to calculate center
-                _xrayeyalignmvy = epics_get("XOMNYI-XEYE-MVY:0")
+                _xrayeyalignmvy = dev.omny_xray_gui.mvy.get()
                 if _xrayeyalignmvy != 0:
                     self.flomni.feedback_disable()
-                    umvr(dev.fsamy, _xrayeyalignmvy / 1000)
+                    if not self.test_wo_movements:
+                        umvr(dev.fsamy, _xrayeyalignmvy / 1000)
                     time.sleep(2)
-                    epics_put("XOMNYI-XEYE-MVY:0", 0)
+                    dev.omny_xray_gui.mvy.set(0)
                     self.flomni.feedback_enable_with_reset()
                     self.update_frame(keep_shutter_open)
-            time.sleep(0.2)
+            time.sleep(0.1)
 
         self.write_output()
         fovx = self._xray_fov_xy[0] * self.PIXEL_CALIBRATION * 1000 / 2
@@ -248,22 +233,17 @@ class XrayEyeAlign:
 
         umv(dev.rtx, 0)
 
-        # free camera        
-        if self.labview:
-            epics_put("XOMNYI-XEYE-ACQ:0", 2)
-        if keep_shutter_open and not self.labview:
-            if self.flomni.OMNYTools.yesno("Close the shutter now?","y"):
-                fshclose()
-                epics_put("XOMNYI-XEYE-ACQ:0", 0)
-        if not self.labview:
-            self.flomni.flomnigui_idle()
-  
+        if keep_shutter_open:
+            if self.flomni.OMNYTools.yesno("Close the shutter now?", "y"):
+                dev.omnyfsh.fshclose()
+                self.gui.on_live_view_enabled(False)
+                print("setting 'XOMNYI-XEYE-ACQ:0'")
 
         print(
             f"The largest field of view from the xrayeyealign was \nfovx = {fovx:.0f} microns, fovy"
             f" = {fovy:.0f} microns"
         )
-        print("Use the matlab routine to FIT the current alignment...")
+        print("Check the fit in the GUI...")
 
         print("Then LOAD ALIGNMENT PARAMETERS by running flomni.read_alignment_offset()\n")
 
@@ -271,9 +251,32 @@ class XrayEyeAlign:
         file = os.path.expanduser("~/Data10/specES1/internal/xrayeye_alignmentvalues")
         if not os.path.exists(file):
             os.makedirs(os.path.dirname(file), exist_ok=True)
+
         with open(file, "w") as alignment_values_file:
             alignment_values_file.write("angle\thorizontal\n")
+
+            # Initialize an empty list to store fovx values
+            fovx_list = []
+            fovx_offsets = np.zeros(5)  # holds offsets for k = 1..5
+
             for k in range(1, 6):
                 fovx_offset = self.alignment_values[0] - self.alignment_values[k]
+                fovx_offsets[k - 1] = fovx_offset  # store in array
+
+                fovx_x = (k - 1) * 45
+                fovx_list.append([fovx_x, fovx_offset * 1000])  # Append the data to the list
+
                 print(f"Writing to file new alignment: number {k}, value x {fovx_offset}")
-                alignment_values_file.write(f"{(k-1)*45}\t{fovx_offset*1000}\n")
+                alignment_values_file.write(f"{fovx_x}\t{fovx_offset * 1000}\n")
+
+            # Now build final numpy array:
+            data = np.array(
+                [
+                    [0, 45, 90, 135, 180],  # angles
+                    fovx_offsets * 1000,  # fovx_offset values
+                    [0, 0, 0, 0, 0],
+                ]
+            )
+        self.gui.submit_fit_array(data)
+        print(f"fit submited with {data}")
+        # self.flomni.flomnigui_show_xeyealign_fittab()

csaxs_bec/bec_ipython_client/plugins/omny/gui_tools.py

@@ -1,7 +1,5 @@
 import builtins
 
-from bec_widgets.cli.client import BECDockArea
-
 # from csaxs_bec.bec_ipython_client.plugins.cSAXS import epics_get, epics_put, fshopen, fshclose
 
 if builtins.__dict__.get("bec") is not None:
@@ -21,7 +19,7 @@ class OMNYGuiTools:
 
     def __init__(self, client):
         self.gui = getattr(client, "gui", None)
-        self.gui_window = self.gui.windows['main'].widget
+        self.gui_window = self.gui.windows["main"].widget
         self.fig200 = None
         self.fig201 = None
         self.fig202 = None
@@ -139,7 +137,9 @@ class OMNYGuiTools:
         if self.progressbar is None:
             self.omnygui_remove_all_docks()
             # Add a new dock with a RingProgressBar widget
-            self.progressbar = self.gui_window.add_dock(name="progress").add_widget("RingProgressBar")
+            self.progressbar = self.gui_window.add_dock(name="progress").add_widget(
+                "RingProgressBar"
+            )
             # Customize the size of the progress ring
             self.progressbar.set_line_widths(20)
             # Disable automatic updates and manually set the self.progressbar value

csaxs_bec/bec_widgets/widgets/client.py

@@ -13,69 +13,10 @@ logger = bec_logger.logger
 
 
 _Widgets = {
-    "OmnyAlignment": "OmnyAlignment",
     "XRayEye": "XRayEye",
 }
 
 
-class OmnyAlignment(RPCBase):
-    @property
-    @rpc_call
-    def enable_live_view(self):
-        """
-        None
-        """
-
-    @enable_live_view.setter
-    @rpc_call
-    def enable_live_view(self):
-        """
-        None
-        """
-
-    @property
-    @rpc_call
-    def user_message(self):
-        """
-        None
-        """
-
-    @user_message.setter
-    @rpc_call
-    def user_message(self):
-        """
-        None
-        """
-
-    @property
-    @rpc_call
-    def sample_name(self):
-        """
-        None
-        """
-
-    @sample_name.setter
-    @rpc_call
-    def sample_name(self):
-        """
-        None
-        """
-
-    @property
-    @rpc_call
-    def enable_move_buttons(self):
-        """
-        None
-        """
-
-    @enable_move_buttons.setter
-    @rpc_call
-    def enable_move_buttons(self):
-        """
-        None
-        """
-
-
 class XRayEye(RPCBase):
     @rpc_call
     def active_roi(self) -> "BaseROI | None":
@@ -83,20 +24,6 @@ class XRayEye(RPCBase):
         Return the currently active ROI, or None if no ROI is active.
         """
 
-    @property
-    @rpc_call
-    def enable_live_view(self):
-        """
-        Get or set the live view enabled state.
-        """
-
-    @enable_live_view.setter
-    @rpc_call
-    def enable_live_view(self):
-        """
-        Get or set the live view enabled state.
-        """
-
     @property
     @rpc_call
     def user_message(self):
@@ -111,6 +38,30 @@ class XRayEye(RPCBase):
         None
         """
 
+    @rpc_call
+    def on_live_view_enabled(self, enabled: "bool"):
+        """
+        None
+        """
+
+    @rpc_call
+    def on_motors_enable(self, x_enable: "bool", y_enable: "bool"):
+        """
+        Enable/Disable motor controls
+
+        Args:
+            x_enable(bool): enable x motor controls
+            y_enable(bool): enable y motor controls
+        """
+
+    @rpc_call
+    def enable_submit_button(self, enable: "bool"):
+        """
+        Enable/disable submit button.
+        Args:
+            enable(int): -1 disable else enable
+        """
+
     @property
     @rpc_call
     def sample_name(self):
@@ -139,6 +90,18 @@ class XRayEye(RPCBase):
         None
         """
 
+    @rpc_call
+    def switch_tab(self, tab: "str"):
+        """
+        None
+        """
+
+    @rpc_call
+    def submit_fit_array(self, fit_array):
+        """
+        None
+        """
+
 
 class XRayEye2DControl(RPCBase):
     @rpc_call
@@ -146,3 +109,15 @@ class XRayEye2DControl(RPCBase):
         """
         Cleanup the BECConnector
         """
+
+    @rpc_call
+    def attach(self):
+        """
+        None
+        """
+
+    @rpc_call
+    def detach(self):
+        """
+        Detach the widget from its parent dock widget (if widget is in the dock), making it a floating widget.
+        """

csaxs_bec/bec_widgets/widgets/omny_alignment/omny_alignment.py

@@ -1,140 +0,0 @@
-
-
-from typing import TypedDict
-from bec_widgets.utils.error_popups import SafeSlot
-import os
-from bec_widgets.utils.bec_widget import BECWidget
-from bec_widgets.utils.ui_loader import UILoader
-from qtpy.QtWidgets import QWidget, QPushButton, QLineEdit, QLabel, QVBoxLayout
-from bec_qthemes import material_icon
-from bec_lib.logger import bec_logger
-
-logger = bec_logger.logger 
-
-
-# class OmnyAlignmentUIComponents(TypedDict):
-#     moveRightButton: QPushButton
-#     moveLeftButton: QPushButton
-#     moveUpButton: QPushButton
-#     moveDownButton: QPushButton
-#     image: Image
-
-
-class OmnyAlignment(BECWidget, QWidget):
-    USER_ACCESS = ["enable_live_view", "enable_live_view.setter", "user_message", "user_message.setter","sample_name", "sample_name.setter", "enable_move_buttons", "enable_move_buttons.setter"]
-    PLUGIN = True
-    ui_file = "./omny_alignment.ui"
-
-    def __init__(self, parent=None, **kwargs):
-        super().__init__(parent=parent, **kwargs)
-        
-        self._load_ui()
-
-    def _load_ui(self):
-        current_path = os.path.dirname(__file__)
-        self.ui = UILoader(self).loader(os.path.join(current_path, self.ui_file))
-        layout = QVBoxLayout()
-        layout.addWidget(self.ui)
-        self.setLayout(layout)
-
-        icon_options = {"size": (16, 16), "convert_to_pixmap": False}
-        self.ui.moveRightButton.setText("")
-        self.ui.moveRightButton.setIcon(
-            material_icon(icon_name="keyboard_arrow_right", **icon_options)
-        )
-
-        self.ui.moveLeftButton.setText("")
-        self.ui.moveLeftButton.setIcon(
-            material_icon(icon_name="keyboard_arrow_left", **icon_options)
-        )
-
-        self.ui.moveUpButton.setText("")
-        self.ui.moveUpButton.setIcon(
-            material_icon(icon_name="keyboard_arrow_up", **icon_options)
-        )
-
-        self.ui.moveDownButton.setText("")
-        self.ui.moveDownButton.setIcon(
-            material_icon(icon_name="keyboard_arrow_down", **icon_options)
-        )
-
-        self.ui.confirmButton.setText("OK")
-
-
-        self.ui.liveViewSwitch.enabled.connect(self.on_live_view_enabled)
-
-        # self.ui.moveUpButton.clicked.connect(self.on_move_up)
-
-
-    @property
-    def enable_live_view(self):
-        return self.ui.liveViewSwitch.checked
-    
-    @enable_live_view.setter
-    def enable_live_view(self, enable:bool):
-        self.ui.liveViewSwitch.checked = enable
-
-
-    @property
-    def user_message(self):
-        return self.ui.messageLineEdit.text()
-    
-    @user_message.setter
-    def user_message(self, message:str):
-        self.ui.messageLineEdit.setText(message)
-
-    @property
-    def sample_name(self):
-        return self.ui.sampleLineEdit.text()
-    
-    @sample_name.setter
-    def sample_name(self, message:str):
-        self.ui.sampleLineEdit.setText(message)
-
-
-    @SafeSlot(bool)
-    def on_live_view_enabled(self, enabled:bool):
-        from bec_widgets.widgets.plots.image.image import Image
-        logger.info(f"Live view is enabled: {enabled}")
-        image: Image = self.ui.image
-        if enabled:
-            image.image("cam_xeye")
-            return
-        
-        image.disconnect_monitor("cam_xeye")
-
-
-    @property
-    def enable_move_buttons(self):
-        move_up:QPushButton = self.ui.moveUpButton
-        move_down:QPushButton = self.ui.moveDownButton
-        move_left:QPushButton = self.ui.moveLeftButton
-        move_right:QPushButton = self.ui.moveRightButton
-        return move_up.isEnabled() and move_down.isEnabled() and move_left.isEnabled() and move_right.isEnabled()
-    
-    @enable_move_buttons.setter
-    def enable_move_buttons(self, enabled:bool):
-        move_up:QPushButton = self.ui.moveUpButton
-        move_down:QPushButton = self.ui.moveDownButton
-        move_left:QPushButton = self.ui.moveLeftButton
-        move_right:QPushButton = self.ui.moveRightButton
-
-        move_up.setEnabled(enabled)
-        move_down.setEnabled(enabled)
-        move_left.setEnabled(enabled)
-        move_right.setEnabled(enabled)
-
-        
-
-
-
-
-if __name__ == "__main__":
-    from qtpy.QtWidgets import QApplication
-    import sys
-
-    app = QApplication(sys.argv)
-    widget = OmnyAlignment()
-
-    widget.show()
-    sys.exit(app.exec_())

csaxs_bec/bec_widgets/widgets/omny_alignment/omny_alignment.pyproject

@@ -1 +0,0 @@
-{'files': ['omny_alignment.py']}

csaxs_bec/bec_widgets/widgets/omny_alignment/omny_alignment.ui

@@ -1,125 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<ui version="4.0">
- <class>Form</class>
- <widget class="QWidget" name="Form">
-  <property name="geometry">
-   <rect>
-    <x>0</x>
-    <y>0</y>
-    <width>988</width>
-    <height>821</height>
-   </rect>
-  </property>
-  <property name="windowTitle">
-   <string>Form</string>
-  </property>
-  <layout class="QGridLayout" name="gridLayout_3">
-   <item row="2" column="2">
-    <layout class="QGridLayout" name="gridLayout">
-     <item row="1" column="2">
-      <widget class="QPushButton" name="moveRightButton">
-       <property name="text">
-        <string>PushButton</string>
-       </property>
-      </widget>
-     </item>
-     <item row="1" column="0">
-      <widget class="QPushButton" name="moveLeftButton">
-       <property name="text">
-        <string>PushButton</string>
-       </property>
-      </widget>
-     </item>
-     <item row="0" column="1">
-      <widget class="QPushButton" name="moveUpButton">
-       <property name="text">
-        <string>Up</string>
-       </property>
-      </widget>
-     </item>
-     <item row="2" column="1">
-      <widget class="QPushButton" name="moveDownButton">
-       <property name="text">
-        <string>PushButton</string>
-       </property>
-      </widget>
-     </item>
-     <item row="1" column="1">
-      <widget class="QPushButton" name="confirmButton">
-       <property name="text">
-        <string>PushButton</string>
-       </property>
-      </widget>
-     </item>
-    </layout>
-   </item>
-   <item row="2" column="0">
-    <layout class="QGridLayout" name="gridLayout_2">
-     <item row="0" column="1">
-      <widget class="QLineEdit" name="sampleLineEdit"/>
-     </item>
-     <item row="1" column="1">
-      <widget class="QLineEdit" name="messageLineEdit"/>
-     </item>
-     <item row="0" column="0">
-      <widget class="QLabel" name="label">
-       <property name="text">
-        <string>Sample</string>
-       </property>
-      </widget>
-     </item>
-     <item row="1" column="0">
-      <widget class="QLabel" name="label_2">
-       <property name="text">
-        <string>Message</string>
-       </property>
-      </widget>
-     </item>
-    </layout>
-   </item>
-   <item row="1" column="0" colspan="3">
-    <widget class="Image" name="image">
-     <property name="enable_toolbar" stdset="0">
-      <bool>false</bool>
-     </property>
-     <property name="inner_axes" stdset="0">
-      <bool>false</bool>
-     </property>
-     <property name="monitor" stdset="0">
-      <string>cam_xeye</string>
-     </property>
-     <property name="rotation" stdset="0">
-      <number>3</number>
-     </property>
-    </widget>
-   </item>
-   <item row="0" column="3">
-    <widget class="ToggleSwitch" name="liveViewSwitch"/>
-   </item>
-   <item row="0" column="2">
-    <widget class="QLabel" name="label_3">
-     <property name="text">
-      <string>Live View</string>
-     </property>
-     <property name="alignment">
-      <set>Qt::AlignmentFlag::AlignRight|Qt::AlignmentFlag::AlignTrailing|Qt::AlignmentFlag::AlignVCenter</set>
-     </property>
-    </widget>
-   </item>
-  </layout>
- </widget>
- <customwidgets>
-  <customwidget>
-   <class>Image</class>
-   <extends>QWidget</extends>
-   <header>image</header>
-  </customwidget>
-  <customwidget>
-   <class>ToggleSwitch</class>
-   <extends>QWidget</extends>
-   <header>toggle_switch</header>
-  </customwidget>
- </customwidgets>
- <resources/>
- <connections/>
-</ui>

csaxs_bec/bec_widgets/widgets/omny_alignment/omny_alignment_plugin.py

@@ -1,54 +0,0 @@
-# Copyright (C) 2022 The Qt Company Ltd.
-# SPDX-License-Identifier: LicenseRef-Qt-Commercial OR BSD-3-Clause
-
-from qtpy.QtDesigner import QDesignerCustomWidgetInterface
-
-from bec_widgets.utils.bec_designer import designer_material_icon
-from csaxs_bec.bec_widgets.widgets.omny_alignment.omny_alignment import OmnyAlignment
-
-DOM_XML = """
-<ui language='c++'>
-    <widget class='OmnyAlignment' name='omny_alignment'>
-    </widget>
-</ui>
-"""
-
-
-class OmnyAlignmentPlugin(QDesignerCustomWidgetInterface):  # pragma: no cover
-    def __init__(self):
-        super().__init__()
-        self._form_editor = None
-
-    def createWidget(self, parent):
-        t = OmnyAlignment(parent)
-        return t
-
-    def domXml(self):
-        return DOM_XML
-
-    def group(self):
-        return ""
-
-    def icon(self):
-        return designer_material_icon(OmnyAlignment.ICON_NAME)
-
-    def includeFile(self):
-        return "omny_alignment"
-
-    def initialize(self, form_editor):
-        self._form_editor = form_editor
-
-    def isContainer(self):
-        return False
-
-    def isInitialized(self):
-        return self._form_editor is not None
-
-    def name(self):
-        return "OmnyAlignment"
-
-    def toolTip(self):
-        return "OmnyAlignment"
-
-    def whatsThis(self):
-        return self.toolTip()

csaxs_bec/bec_widgets/widgets/omny_alignment/register_omny_alignment.py

@@ -1,15 +0,0 @@
-def main():  # pragma: no cover
-    from qtpy import PYSIDE6
-
-    if not PYSIDE6:
-        print("PYSIDE6 is not available in the environment. Cannot patch designer.")
-        return
-    from PySide6.QtDesigner import QPyDesignerCustomWidgetCollection
-
-    from csaxs_bec.bec_widgets.widgets.omny_alignment.omny_alignment_plugin import OmnyAlignmentPlugin
-
-    QPyDesignerCustomWidgetCollection.addCustomWidget(OmnyAlignmentPlugin())
-
-
-if __name__ == "__main__":  # pragma: no cover
-    main()

csaxs_bec/bec_widgets/widgets/xray_eye/x_ray_eye.py

@@ -5,6 +5,7 @@ from bec_lib.endpoints import MessageEndpoints
 from bec_qthemes import material_icon
 from bec_widgets import BECWidget, SafeProperty, SafeSlot
 from bec_widgets.widgets.plots.image.image import Image
+from bec_widgets.widgets.plots.waveform.waveform import Waveform
 from bec_widgets.widgets.plots.image.setting_widgets.image_roi_tree import ROIPropertyTree
 from bec_widgets.widgets.plots.roi.image_roi import BaseROI, CircularROI, RectangularROI
 from bec_widgets.widgets.utility.toggle.toggle import ToggleSwitch
@@ -21,7 +22,10 @@ from qtpy.QtWidgets import (
     QToolButton,
     QVBoxLayout,
     QWidget,
+    QTextEdit,
+    QTabWidget,
 )
+import time
 
 logger = bec_logger.logger
 CAMERA = ("cam_xeye", "image")
@@ -41,38 +45,38 @@ class XRayEye2DControl(BECWidget, QWidget):
         """)
         # Up
         self.move_up_button = QToolButton(parent=self)
-        self.move_up_button.setIcon(material_icon('keyboard_double_arrow_up'))
+        self.move_up_button.setIcon(material_icon("keyboard_double_arrow_up"))
         self.root_layout.addWidget(self.move_up_button, 0, 2)
         # Up tweak button
         self.move_up_tweak_button = QToolButton(parent=self)
-        self.move_up_tweak_button.setIcon(material_icon('keyboard_arrow_up'))
+        self.move_up_tweak_button.setIcon(material_icon("keyboard_arrow_up"))
         self.root_layout.addWidget(self.move_up_tweak_button, 1, 2)
 
         # Left
         self.move_left_button = QToolButton(parent=self)
-        self.move_left_button.setIcon(material_icon('keyboard_double_arrow_left'))
+        self.move_left_button.setIcon(material_icon("keyboard_double_arrow_left"))
         self.root_layout.addWidget(self.move_left_button, 2, 0)
         # Left tweak button
         self.move_left_tweak_button = QToolButton(parent=self)
-        self.move_left_tweak_button.setIcon(material_icon('keyboard_arrow_left'))
+        self.move_left_tweak_button.setIcon(material_icon("keyboard_arrow_left"))
         self.root_layout.addWidget(self.move_left_tweak_button, 2, 1)
 
         # Right
         self.move_right_button = QToolButton(parent=self)
-        self.move_right_button.setIcon(material_icon('keyboard_double_arrow_right'))
+        self.move_right_button.setIcon(material_icon("keyboard_double_arrow_right"))
         self.root_layout.addWidget(self.move_right_button, 2, 4)
         # Right tweak button
         self.move_right_tweak_button = QToolButton(parent=self)
-        self.move_right_tweak_button.setIcon(material_icon('keyboard_arrow_right'))
+        self.move_right_tweak_button.setIcon(material_icon("keyboard_arrow_right"))
         self.root_layout.addWidget(self.move_right_tweak_button, 2, 3)
 
         # Down
         self.move_down_button = QToolButton(parent=self)
-        self.move_down_button.setIcon(material_icon('keyboard_double_arrow_down'))
+        self.move_down_button.setIcon(material_icon("keyboard_double_arrow_down"))
         self.root_layout.addWidget(self.move_down_button, 4, 2)
         # Down tweak button
         self.move_down_tweak_button = QToolButton(parent=self)
-        self.move_down_tweak_button.setIcon(material_icon('keyboard_arrow_down'))
+        self.move_down_tweak_button.setIcon(material_icon("keyboard_arrow_down"))
         self.root_layout.addWidget(self.move_down_tweak_button, 3, 2)
 
         # Connections
@@ -124,8 +128,20 @@ class XRayEye2DControl(BECWidget, QWidget):
 
 
 class XRayEye(BECWidget, QWidget):
-    USER_ACCESS = ["active_roi", "enable_live_view", "enable_live_view.setter", "user_message", "user_message.setter",
-                   "sample_name", "sample_name.setter", "enable_move_buttons", "enable_move_buttons.setter"]
+    USER_ACCESS = [
+        "active_roi",
+        "user_message",
+        "user_message.setter",
+        "on_live_view_enabled",
+        "on_motors_enable",
+        "enable_submit_button",
+        "sample_name",
+        "sample_name.setter",
+        "enable_move_buttons",
+        "enable_move_buttons.setter",
+        "switch_tab",
+        "submit_fit_array",
+    ]
     PLUGIN = True
 
     def __init__(self, parent=None, **kwargs):
@@ -136,28 +152,44 @@ class XRayEye(BECWidget, QWidget):
         self._make_connections()
 
         # Connection to redis endpoints
-        self.bec_dispatcher.connect_slot(self.device_updates, MessageEndpoints.device_readback("omny_xray_gui"))
+        self.bec_dispatcher.connect_slot(
+            self.getting_shutter_status, MessageEndpoints.device_readback("omnyfsh")
+        )
+        self.bec_dispatcher.connect_slot(
+            self.getting_camera_status, MessageEndpoints.device_read_configuration(CAMERA[0])
+        )
+
         self.connect_motors()
         self.resize(800, 600)
         QTimer.singleShot(0, self._init_gui_trigger)
 
     def _init_ui(self):
-        self.core_layout = QHBoxLayout(self)
+        self.root_layout = QVBoxLayout(self)
+        self.tab_widget = QTabWidget(parent=self)
+        self.root_layout.addWidget(self.tab_widget)
 
-        self.image = Image(parent=self)
-        self.image.enable_toolbar = False  # Disable default toolbar to not allow to user set anything
+        self.alignment_tab = QWidget(parent=self)
+        self.core_layout = QHBoxLayout(self.alignment_tab)
+
+        self.image = Image(parent=self.alignment_tab)
+        self.image.color_map = "CET-L2"
+        self.image.enable_toolbar = (
+            False  # Disable default toolbar to not allow to user set anything
+        )
         self.image.inner_axes = False  # Disable inner axes to maximize image area
-        self.image.plot_item.vb.invertY(True)  # #TODO Invert y axis to match logic of LabView GUI
+        self.image.enable_full_colorbar = True
+        self.image.invert_y = True  # Invert y axis to match image coordinates
 
         # Control panel on the right: vertical layout inside a fixed-width widget
-        self.control_panel = QWidget(parent=self)
+        self.control_panel = QWidget(parent=self.alignment_tab)
         self.control_panel_layout = QVBoxLayout(self.control_panel)
         self.control_panel_layout.setContentsMargins(0, 0, 0, 0)
         self.control_panel_layout.setSpacing(10)
 
         # ROI toolbar + Live toggle (header row)
-        self.roi_manager = ROIPropertyTree(parent=self, image_widget=self.image, compact=True,
-                                           compact_orientation="horizontal")
+        self.roi_manager = ROIPropertyTree(
+            parent=self, image_widget=self.image, compact=True, compact_orientation="horizontal"
+        )
         header_row = QHBoxLayout()
         header_row.setContentsMargins(0, 0, 0, 0)
         header_row.setSpacing(8)
@@ -166,16 +198,36 @@ class XRayEye(BECWidget, QWidget):
         self.live_preview_label = QLabel("Live Preview", parent=self)
         self.live_preview_toggle = ToggleSwitch(parent=self)
         self.live_preview_toggle.checked = False
-        header_row.addWidget(self.live_preview_label, 0, Qt.AlignVCenter)
-        header_row.addWidget(self.live_preview_toggle, 0, Qt.AlignVCenter)
+        header_row.addWidget(self.live_preview_label, 0, Qt.AlignmentFlag.AlignVCenter)
+        header_row.addWidget(self.live_preview_toggle, 0, Qt.AlignmentFlag.AlignVCenter)
         self.control_panel_layout.addLayout(header_row)
 
+        switch_row = QHBoxLayout()
+        switch_row.setContentsMargins(0, 0, 0, 0)
+        switch_row.setSpacing(8)
+        switch_row.addStretch()
+        self.camera_running_label = QLabel("Camera running", parent=self)
+        self.camera_running_toggle = ToggleSwitch(parent=self)
+        # self.camera_running_toggle.checked = False
+        self.camera_running_toggle.enabled.connect(self.camera_running_enabled)
+        self.shutter_label = QLabel("Shutter open", parent=self)
+        self.shutter_toggle = ToggleSwitch(parent=self)
+        # self.shutter_toggle.checked = False
+        self.shutter_toggle.enabled.connect(self.opening_shutter)
+        switch_row.addWidget(self.shutter_label, 0, Qt.AlignmentFlag.AlignVCenter)
+        switch_row.addWidget(self.shutter_toggle, 0, Qt.AlignmentFlag.AlignVCenter)
+        switch_row.addWidget(self.camera_running_label, 0, Qt.AlignmentFlag.AlignVCenter)
+        switch_row.addWidget(self.camera_running_toggle, 0, Qt.AlignmentFlag.AlignVCenter)
+        self.control_panel_layout.addLayout(switch_row)
+
         # separator
         self.control_panel_layout.addWidget(self._create_separator())
 
         # 2D Positioner (fixed size)
         self.motor_control_2d = XRayEye2DControl(parent=self)
-        self.control_panel_layout.addWidget(self.motor_control_2d, 0, Qt.AlignTop | Qt.AlignCenter)
+        self.control_panel_layout.addWidget(
+            self.motor_control_2d, 0, Qt.AlignmentFlag.AlignTop | Qt.AlignmentFlag.AlignCenter
+        )
 
         # separator
         self.control_panel_layout.addWidget(self._create_separator())
@@ -190,9 +242,8 @@ class XRayEye(BECWidget, QWidget):
         # Submit button
         self.submit_button = QPushButton("Submit", parent=self)
         # Add to layout form
-        step_size_form.addWidget(QLabel("Horizontal", parent=self), 0, 0)
+        step_size_form.addWidget(QLabel("Step Size", parent=self), 0, 0)
         step_size_form.addWidget(self.step_size, 0, 1)
-        step_size_form.addWidget(QLabel("Vertical", parent=self), 1, 0)
         step_size_form.addWidget(self.submit_button, 2, 0, 1, 2)
 
         # Add form to control panel
@@ -207,7 +258,8 @@ class XRayEye(BECWidget, QWidget):
         self.sample_name_line_edit.setReadOnly(True)
         form.addWidget(QLabel("Sample", parent=self), 0, 0)
         form.addWidget(self.sample_name_line_edit, 0, 1)
-        self.message_line_edit = QLineEdit(parent=self)
+        self.message_line_edit = QTextEdit(parent=self)
+        self.message_line_edit.setFixedHeight(60)
         self.message_line_edit.setReadOnly(True)
         form.addWidget(QLabel("Message", parent=self), 1, 0)
         form.addWidget(self.message_line_edit, 1, 1)
@@ -217,12 +269,57 @@ class XRayEye(BECWidget, QWidget):
         self.control_panel.adjustSize()
         p_hint = self.control_panel.sizeHint()
         self.control_panel.setFixedWidth(p_hint.width())
-        self.control_panel.setSizePolicy(QSizePolicy.Fixed, QSizePolicy.Expanding)
+        self.control_panel.setSizePolicy(QSizePolicy.Policy.Fixed, QSizePolicy.Policy.Expanding)
 
         # Core Layout: image (expanding) | control panel (fixed)
         self.core_layout.addWidget(self.image)
         self.core_layout.addWidget(self.control_panel)
 
+        self.tab_widget.addTab(self.alignment_tab, "Alignment")
+
+        self.fit_tab = QWidget(parent=self)
+        self.fit_layout = QVBoxLayout(self.fit_tab)
+        self.waveform_x = Waveform(parent=self.fit_tab)
+        self.waveform_y = Waveform(parent=self.fit_tab)
+
+        self.waveform_x.plot(
+            x=[0],
+            y=[1],
+            label="fit-x",
+            dap=["SineModel", "LinearModel"],
+            dap_parameters=[
+                {"frequency": {"value": 0.0174533, "vary": False, "min": 0.01, "max": 0.02}},
+                {"slope": {"value": 0, "vary": False, "min": 0.0, "max": 0.02}},
+            ],
+            dap_oversample=5,
+        )
+        self.waveform_y.plot(
+            x=[0],
+            y=[2],
+            label="fit-y",
+            dap=["SineModel", "LinearModel"],
+            dap_parameters=[
+                {"frequency": {"value": 0.0174533, "vary": False, "min": 0.01, "max": 0.02}},
+                {"slope": {"value": 0, "vary": False, "min": 0.0, "max": 0.02}},
+            ],
+            dap_oversample=5,
+        )
+        self.fit_x = self.waveform_x.curves[0]
+        self.fit_y = self.waveform_y.curves[0]
+
+        self.waveform_x.dap_params_update.connect(self.on_dap_params)
+        self.waveform_y.dap_params_update.connect(self.on_dap_params)
+
+        for wave in (self.waveform_x, self.waveform_y):
+            wave.x_label = "Angle (deg)"
+            wave.x_grid = True
+            wave.y_grid = True
+            wave.enable_toolbar = True
+
+        self.fit_layout.addWidget(self.waveform_x)
+        self.fit_layout.addWidget(self.waveform_y)
+        self.tab_widget.addTab(self.fit_tab, "Fit")
+
     def _make_connections(self):
         # Fetch initial state
         self.on_live_view_enabled(True)
@@ -230,31 +327,36 @@ class XRayEye(BECWidget, QWidget):
 
         # Make connections
         self.live_preview_toggle.enabled.connect(self.on_live_view_enabled)
-        self.step_size.valueChanged.connect(lambda x: self.motor_control_2d.setProperty("step_size", x))
+        self.step_size.valueChanged.connect(
+            lambda x: self.motor_control_2d.setProperty("step_size", x)
+        )
         self.submit_button.clicked.connect(self.submit)
 
     def _create_separator(self):
         sep = QFrame(parent=self)
-        sep.setFrameShape(QFrame.HLine)
-        sep.setFrameShadow(QFrame.Sunken)
+        sep.setFrameShape(QFrame.Shape.HLine)
+        sep.setFrameShadow(QFrame.Shadow.Sunken)
         sep.setLineWidth(1)
         return sep
 
     def _init_gui_trigger(self):
         self.dev.omny_xray_gui.read()
+        self.dev.omnyfsh.read()
 
     ################################################################################
     # Device Connection logic
     ################################################################################
 
     def connect_motors(self):
-        """ Checks one of the possible motors for flomni, omny and lamni setup."""
-        possible_motors = ['osamroy', 'lsamrot', 'fsamroy']
+        """Checks one of the possible motors for flomni, omny and lamni setup."""
+        possible_motors = ["osamroy", "lsamrot", "fsamroy"]
 
         for motor in possible_motors:
             if motor in self.dev:
-                self.bec_dispatcher.connect_slot(self.on_tomo_angle_readback, MessageEndpoints.device_readback(motor))
-                logger.info(f"Succesfully connected to {motor}")
+                self.bec_dispatcher.connect_slot(
+                    self.on_tomo_angle_readback, MessageEndpoints.device_readback(motor)
+                )
+                logger.info(f"Successfully connected to {motor}")
 
     ################################################################################
     # Properties ported from the original OmnyAlignment, can be adjusted as needed
@@ -291,6 +393,13 @@ class XRayEye(BECWidget, QWidget):
     # Slots ported from the original OmnyAlignment, can be adjusted as needed
     ################################################################################
 
+    @SafeSlot(str)
+    def switch_tab(self, tab: str):
+        if tab == "fit":
+            self.tab_widget.setCurrentIndex(1)
+        else:
+            self.tab_widget.setCurrentIndex(0)
+
     @SafeSlot()
     def get_roi_coordinates(self) -> dict | None:
         """Get the coordinates of the currently active ROI."""
@@ -307,14 +416,48 @@ class XRayEye(BECWidget, QWidget):
         self.live_preview_toggle.blockSignals(True)
         if enabled:
             self.live_preview_toggle.checked = enabled
-            self.image.image(CAMERA)
+            self.image.image(device=CAMERA[0], signal=CAMERA[1])
             self.live_preview_toggle.blockSignals(False)
             return
 
-        self.image.disconnect_monitor(CAMERA)
+        self.image.disconnect_monitor(CAMERA[0], CAMERA[1])
         self.live_preview_toggle.checked = enabled
         self.live_preview_toggle.blockSignals(False)
 
+    @SafeSlot(bool)
+    def camera_running_enabled(self, enabled: bool):
+        logger.info(f"Camera running: {enabled}")
+        self.camera_running_toggle.blockSignals(True)
+        self.dev.get(CAMERA[0]).live_mode_enabled.put(enabled)
+        self.camera_running_toggle.checked = enabled
+        self.camera_running_toggle.blockSignals(False)
+
+    @SafeSlot(dict, dict)
+    def getting_camera_status(self, data, meta):
+        print(f"msg:{data}")
+        live_mode_enabled = data.get("signals").get(f"{CAMERA[0]}_live_mode_enabled").get("value")
+        self.camera_running_toggle.blockSignals(True)
+        self.camera_running_toggle.checked = live_mode_enabled
+        self.camera_running_toggle.blockSignals(False)
+
+    @SafeSlot(bool)
+    def opening_shutter(self, enabled: bool):
+        logger.info(f"Shutter changed from GUI to: {enabled}")
+        self.shutter_toggle.blockSignals(True)
+        if enabled:
+            self.dev.omnyfsh.fshopen()
+        else:
+            self.dev.omnyfsh.fshclose()
+        # self.shutter_toggle.checked = enabled
+        self.shutter_toggle.blockSignals(False)
+
+    @SafeSlot(dict, dict)
+    def getting_shutter_status(self, data, meta):
+        shutter_open = bool(data.get("signals").get("omnyfsh_shutter").get("value"))
+        self.shutter_toggle.blockSignals(True)
+        self.shutter_toggle.checked = shutter_open
+        self.shutter_toggle.blockSignals(False)
+
     @SafeSlot(bool, bool)
     def on_motors_enable(self, x_enable: bool, y_enable: bool):
         """
@@ -327,98 +470,108 @@ class XRayEye(BECWidget, QWidget):
         self.motor_control_2d.enable_controls_hor(x_enable)
         self.motor_control_2d.enable_controls_ver(y_enable)
 
-    @SafeSlot(int)
-    def enable_submit_button(self, enable: int):
+    @SafeSlot(bool)
+    def enable_submit_button(self, enable: bool):
         """
         Enable/disable submit button.
         Args:
             enable(int): -1 disable else enable
         """
-        if enable == -1:
-            self.submit_button.setEnabled(False)
-        else:
+        if enable:
             self.submit_button.setEnabled(True)
+        else:
+            self.submit_button.setEnabled(False)
+
+    @SafeSlot(dict, dict)
+    def on_dap_params(self, data, meta):
+        print("#######################################")
+        print("getting dap parameters")
+        print(f"data: {data}")
+        print(f"meta: {meta}")
+        self.waveform_x.auto_range(True)
+        self.waveform_y.auto_range(True)
+        # self.bec_dispatcher.disconnect_slot(self.device_updates, MessageEndpoints.device_readback("omny_xray_gui"))
+        curve_id = meta.get("curve_id")
+
+        if curve_id == "fit-x-SineModel+LinearModel":
+            self.dev.omny_xray_gui.fit_params_x.set(data).wait()
+            print(f"setting x data to {data}")
+        else:
+            self.dev.omny_xray_gui.fit_params_y.set(data).wait()
+            print(f"setting y data to {data}")
+        # self.bec_dispatcher.connect_slot(self.device_updates, MessageEndpoints.device_readback("omny_xray_gui"))
 
     @SafeSlot(bool, bool)
     def on_tomo_angle_readback(self, data: dict, meta: dict):
-        #TODO implement if needed
+        # TODO implement if needed
         print(f"data: {data}")
         print(f"meta: {meta}")
 
-    @SafeSlot(dict, dict)
-    def device_updates(self, data: dict, meta: dict):
-        """
-        Slot to handle device updates from omny_xray_gui device.
-
-        Args:
-            data(dict):  data from device
-            meta(dict): metadata from device
-        """
-
-        signals = data.get('signals')
-        enable_live_preview = signals.get("omny_xray_gui_update_frame_acq").get('value')
-        enable_x_motor = signals.get("omny_xray_gui_enable_mv_x").get('value')
-        enable_y_motor = signals.get("omny_xray_gui_enable_mv_y").get('value')
-        self.on_live_view_enabled(bool(enable_live_preview))
-        self.on_motors_enable(bool(enable_x_motor), bool(enable_y_motor))
-
-        # Signals from epics gui device
-        # send message
-        user_message = signals.get("omny_xray_gui_send_message").get('value')
-        self.user_message = user_message
-        # sample name
-        sample_message = signals.get("omny_xray_gui_sample_name").get('value')
-        self.sample_name = sample_message
-        # enable frame acquisition
-        update_frame_acq = signals.get("omny_xray_gui_update_frame_acq").get('value')
-        self.on_live_view_enabled(bool(update_frame_acq))
-        # enable submit button
-        enable_submit_button = signals.get("omny_xray_gui_submit").get('value')
-        self.enable_submit_button(enable_submit_button)
+    @SafeSlot()
+    def submit_fit_array(self, fit_array):
+        self.tab_widget.setCurrentIndex(1)
+        # self.fix_x.title = " got fit array"
+        print(f"got fit array {fit_array}")
+        self.waveform_x.curves[0].set_data(x=fit_array[0], y=fit_array[1])
+        self.waveform_y.curves[0].set_data(x=fit_array[0], y=fit_array[2])
+        # self.fit_x.set_data(x=fit_array[0],y=fit_array[1])
+        # self.fit_y.set_data(x=fit_array[0],y=fit_array[2])
 
     @SafeSlot()
     def submit(self):
         """Execute submit action by submit button."""
+        print("submit pushed")
+        self.submit_button.blockSignals(True)
         if self.roi_manager.single_active_roi is None:
             logger.warning("No active ROI")
             return
         roi_coordinates = self.roi_manager.single_active_roi.get_coordinates()
-        roi_center_x = roi_coordinates['center_x']
-        roi_center_y = roi_coordinates['center_y']
+        roi_center_x = roi_coordinates["center_x"]
+        roi_center_y = roi_coordinates["center_y"]
         # Case of rectangular ROI
         if isinstance(self.roi_manager.single_active_roi, RectangularROI):
-            roi_width = roi_coordinates['width']
-            roi_height = roi_coordinates['height']
+            roi_width = roi_coordinates["width"]
+            roi_height = roi_coordinates["height"]
         elif isinstance(self.roi_manager.single_active_roi, CircularROI):
-            roi_width = roi_coordinates['diameter']
-            roi_height = roi_coordinates['radius']
+            roi_width = roi_coordinates["diameter"]
+            roi_height = roi_coordinates["radius"]
         else:
             logger.warning("Unsupported ROI type for submit action.")
             return
 
-        print(f"current roi: x:{roi_center_x}, y:{roi_center_y}, w:{roi_width},h:{roi_height}") #TODO remove when will be not needed for debugging
+        print(
+            f"current roi: x:{roi_center_x}, y:{roi_center_y}, w:{roi_width},h:{roi_height}"
+        )  # TODO remove when will be not needed for debugging
         # submit roi coordinates
-        step = int(self.dev.omny_xray_gui.step.read().get("omny_xray_gui_step").get('value'))
+        step = int(self.dev.omny_xray_gui.step.read().get("omny_xray_gui_step").get("value"))
 
-        xval_x = getattr(self.dev.omny_xray_gui.xval_x, f"xval_x_{step}").set(roi_center_x)
-        xval_y = getattr(self.dev.omny_xray_gui.yval_y, f"yval_y_{step}").set(roi_center_y)
-        width_x = getattr(self.dev.omny_xray_gui.width_x, f"width_x_{step}").set(roi_width)
-        width_y = getattr(self.dev.omny_xray_gui.width_y, f"width_y_{step}").set(roi_height)
+        xval_x = getattr(self.dev.omny_xray_gui, f"xval_x_{step}").set(roi_center_x)
+        xval_y = getattr(self.dev.omny_xray_gui, f"yval_y_{step}").set(roi_center_y)
+        width_x = getattr(self.dev.omny_xray_gui, f"width_x_{step}").set(roi_width)
+        width_y = getattr(self.dev.omny_xray_gui, f"width_y_{step}").set(roi_height)
         self.dev.omny_xray_gui.submit.set(1)
-    
+        print("submit done")
+        self.submit_button.blockSignals(False)
+
     def cleanup(self):
         """Cleanup connections on widget close -> disconnect slots and stop live mode of camera."""
-        self.bec_dispatcher.disconnect_slot(self.device_updates, MessageEndpoints.device_readback("omny_xray_gui"))
-        getattr(self.dev,CAMERA[0]).live_mode = False
+        self.bec_dispatcher.disconnect_slot(
+            self.device_updates, MessageEndpoints.device_readback("omny_xray_gui")
+        )
+        getattr(self.dev, CAMERA[0]).stop_live_mode()
         super().cleanup()
 
+
 if __name__ == "__main__":
     import sys
 
     from qtpy.QtWidgets import QApplication
+    from bec_widgets.utils import BECDispatcher
+    from bec_widgets.utils.colors import apply_theme
 
     app = QApplication(sys.argv)
-
+    apply_theme("light")
+    dispatcher = BECDispatcher(gui_id="xray")
     win = XRayEye()
 
     win.resize(1000, 800)

csaxs_bec/device_configs/ptycho_flomni.yaml

@@ -435,9 +435,9 @@ cam_xeye:
 #   deviceConfig:
 #     camera_id: 203
 #     bits_per_pixel: 24
-#     num_rotation_90: 3
+#     num_rotation_90: 2
 #     transpose: false
-#     force_monochrome: true
+#     force_monochrome: false
 #     m_n_colormode: 1
 #   enabled: true
 #   onFailure: buffer
@@ -472,7 +472,7 @@ omnyfsh:
 ############################################################
 omny_xray_gui:
   description: Gui signals
-  deviceClass: csaxs_bec.devices.omny.xray_epics_gui.OMNYXRayEpicsGUI
+  deviceClass: csaxs_bec.devices.omny.xray_epics_gui.OMNYXRayAlignGUI
   deviceConfig: {}
   enabled: true
   onFailure: buffer

csaxs_bec/device_configs/ptycho_lamni.yaml

@@ -271,4 +271,20 @@ rty:
   enabled: true
   readOnly: False
 
-
+############################################################
+######################### Cameras ##########################
+############################################################
+cam_xeye:
+  description: Camera LamNI Xray eye ID15
+  deviceClass: csaxs_bec.devices.ids_cameras.ids_camera.IDSCamera
+  deviceConfig:
+    camera_id: 15
+    bits_per_pixel: 24
+    num_rotation_90: 3
+    transpose: false
+    force_monochrome: true
+    m_n_colormode: 1
+  enabled: true
+  onFailure: buffer
+  readOnly: false
+  readoutPriority: async

csaxs_bec/devices/epics/allied_vision_camera.py

@@ -0,0 +1,161 @@
+"""Module for the EPICS integration of the AlliedVision Camera via Vimba SDK."""
+
+import threading
+import traceback
+from enum import IntEnum
+
+import numpy as np
+from bec_lib.logger import bec_logger
+from ophyd import Component as Cpt, Kind, Signal
+from ophyd.areadetector import ADComponent as ADCpt
+from ophyd.areadetector import DetectorBase
+from ophyd_devices import PreviewSignal
+from ophyd_devices.devices.areadetector.cam import VimbaDetectorCam
+from ophyd_devices.devices.areadetector.plugins import ImagePlugin_V35 as ImagePlugin
+from ophyd_devices.interfaces.base_classes.psi_device_base import PSIDeviceBase
+from typeguard import typechecked
+
+logger = bec_logger.logger
+
+
+class ACQUIRE_MODES(IntEnum):
+    """Acquiring enums for Allied Vision Camera"""
+
+    ACQUIRING = 1
+    DONE = 0
+
+
+class AlliedVisionCamera(PSIDeviceBase, DetectorBase):
+    """
+    Epics Area Detector interface for the Allied Vision Alvium G1-507m camera via Vimba SDK.
+    The IOC runs with under the prefix: 'X12SA-GIGECAM-AV1:'.
+    """
+
+    USER_ACCESS = ["start_live_mode", "stop_live_mode"]
+
+    cam = ADCpt(VimbaDetectorCam, "cam1:")
+    image = ADCpt(ImagePlugin, "image1:")
+
+    preview = Cpt(
+        PreviewSignal,
+        name="preview",
+        ndim=2,
+        num_rotation_90=0,
+        transpose=False,
+        doc="Preview signal of the AlliedVision camera.",
+    )
+
+    live_mode_enabled = Cpt(
+        Signal,
+        name="live_mode_enabled",
+        value=False,
+        doc="Enable or disable live mode.",
+        kind=Kind.config,
+    )
+
+    def __init__(
+        self,
+        *,
+        name: str,
+        prefix: str,
+        poll_rate: int = 5,
+        num_rotation_90: int = 0,
+        transpose: bool = False,
+        scan_info=None,
+        device_manager=None,
+        **kwargs,
+    ):
+        super().__init__(
+            name=name, prefix=prefix, scan_info=scan_info, device_manager=device_manager, **kwargs
+        )
+        self._poll_thread = threading.Thread(
+            target=self._poll_array_data, daemon=True, name=f"{self.name}_poll_thread"
+        )
+        self._poll_thread_kill_event = threading.Event()
+        self._poll_start_event = threading.Event()
+        if poll_rate <= 0:
+            logger.warning(
+                f"Poll rate must be positive for Camera {self.name} and non-zero, setting to 1 Hz."
+            )
+            poll_rate = 1
+            self.stop_live_mode()
+        elif poll_rate > 10:
+            logger.warning(f"Poll rate too high for Camera {self.name}, setting to 10 Hz max.")
+            poll_rate = 10
+        self._poll_rate = poll_rate
+        self._unique_array_id = 0
+        self._pv_timeout = 2.0
+        self.image: ImagePlugin
+        self.preview.num_rotation_90 = num_rotation_90
+        self.preview.transpose = transpose
+        self._live_mode_lock = threading.RLock()
+        self.live_mode_enabled.subscribe(self._on_live_mode_enabled_changed, run=False)
+        self.cam.acquire.subscribe(self._on_live_mode_enabled_changed, run=False)
+
+    def start_live_mode(self) -> None:
+        """Start live mode."""
+        self.live_mode_enabled.put(True)
+
+    def stop_live_mode(self) -> None:
+        """Stop live mode."""
+        self.live_mode_enabled.put(False)
+
+    def _on_live_mode_enabled_changed(self, *args, value, **kwargs) -> None:
+        self._apply_live_mode(bool(value))
+
+    def _apply_live_mode(self, enabled: bool) -> None:
+        with self._live_mode_lock:
+            if enabled:
+                if not self._poll_start_event.is_set():
+                    self._poll_start_event.set()
+                    self.cam.acquire.put(ACQUIRE_MODES.ACQUIRING.value)  # Start acquisition
+                else:
+                    logger.info(f"Live mode already started for {self.name}.")
+                return
+
+            if self._poll_start_event.is_set():
+                self._poll_start_event.clear()
+                self.cam.acquire.put(ACQUIRE_MODES.DONE.value)  # Stop acquisition
+            else:
+                logger.info(f"Live mode already stopped for {self.name}.")
+
+    def on_connected(self):
+        """Reset the unique array ID on connection."""
+        self.cam.array_counter.set(0).wait(timeout=self._pv_timeout)
+        self.cam.array_callbacks.set(1).wait(timeout=self._pv_timeout)
+        self._poll_thread.start()
+
+    def _poll_array_data(self):
+        """Poll the array data for preview updates."""
+        while self._poll_start_event.wait():
+            while not self._poll_thread_kill_event.wait(1 / self._poll_rate):
+                try:
+                    # First check if there is a new image
+                    if self.image.unique_id.get() != self._unique_array_id:
+                        self._unique_array_id = self.image.unique_id.get()
+                    else:
+                        continue  # No new image, skip update
+                    # Get new image data
+                    value = self.image.array_data.get()
+                    if value is None:
+                        logger.info(f"No image data available for preview of {self.name}")
+                        continue
+
+                    array_size = self.image.array_size.get()
+                    if array_size[0] == 0:  # 2D image, not color image
+                        array_size = array_size[1:]
+                    # Geometry correction for the image
+                    data = np.reshape(value, array_size)
+                    self.preview.put(data)
+                except Exception:  # pylint: disable=broad-except
+                    content = traceback.format_exc()
+                    logger.error(
+                        f"Error while polling array data for preview of {self.name}: {content}"
+                    )
+
+    def on_destroy(self):
+        """Stop the polling thread on destruction."""
+        self._poll_start_event.set()
+        self._poll_thread_kill_event.set()
+        if self._poll_thread.is_alive():
+            self._poll_thread.join(timeout=2)

csaxs_bec/devices/epics/mcs_card/mcs_card_csaxs.py

@@ -443,7 +443,6 @@ class MCSCardCSAXS(PSIDeviceBase, MCSCard):
         while not self._scan_done_thread_kill_event.is_set():
             while self._start_monitor_async_data_emission.wait():
                 try:
-                    logger.debug(f"Monitoring async data emission for {self.name}...")
                     if (
                         hasattr(self.scan_info.msg, "num_points")
                         and self.scan_info.msg.num_points is not None
@@ -453,7 +452,6 @@ class MCSCardCSAXS(PSIDeviceBase, MCSCard):
                                 for callback in self._scan_done_callbacks:
                                     callback(exception=None)
                         else:
-                            logger.info(f"Current data index is {self._current_data_index}")
                             if self._current_data_index >= 1:
                                 for callback in self._scan_done_callbacks:
                                     callback(exception=None)

csaxs_bec/devices/ids_cameras/base_integration/camera.py

@@ -156,7 +156,6 @@ class Camera:
         camera_id (int): The ID of the camera device.
         m_n_colormode (Literal[0, 1, 2, 3]): Color mode for the camera.
         bits_per_pixel (Literal[8, 24]): Number of bits per pixel for the camera.
-        live_mode (bool): Whether to enable live mode for the camera.
     """
 
     def __init__(

csaxs_bec/devices/ids_cameras/ids_camera.py

@@ -3,21 +3,19 @@
 from __future__ import annotations
 
 import threading
-import time
-from typing import TYPE_CHECKING, Literal, Tuple, TypedDict
+from typing import TYPE_CHECKING, Literal
 
 import numpy as np
+from ophyd import Component as Cpt, Signal, Kind
+
 from bec_lib import messages
 from bec_lib.logger import bec_logger
-from ophyd import Component as Cpt
+from csaxs_bec.devices.ids_cameras.base_integration.camera import Camera
 from ophyd_devices.interfaces.base_classes.psi_device_base import PSIDeviceBase
 from ophyd_devices.utils.bec_signals import AsyncSignal, PreviewSignal
 
-from csaxs_bec.devices.ids_cameras.base_integration.camera import Camera
-
 if TYPE_CHECKING:
     from bec_lib.devicemanager import ScanInfo
-    from pydantic import ValidationInfo
 
 logger = bec_logger.logger
 
@@ -45,8 +43,15 @@ class IDSCamera(PSIDeviceBase):
         doc="Signal for the region of interest (ROI).",
         async_update={"type": "add", "max_shape": [None]},
     )
+    live_mode_enabled = Cpt(
+        Signal,
+        name="live_mode_enabled",
+        value=False,
+        doc="Enable or disable live mode.",
+        kind=Kind.config,
+    )
 
-    USER_ACCESS = ["live_mode", "mask", "set_rect_roi", "get_last_image"]
+    USER_ACCESS = ["start_live_mode", "stop_live_mode", "mask", "set_rect_roi", "get_last_image"]
 
     def __init__(
         self,
@@ -83,15 +88,22 @@ class IDSCamera(PSIDeviceBase):
             bits_per_pixel=bits_per_pixel,
             connect=False,
         )
-        self._live_mode = False
         self._inputs = {"live_mode": live_mode}
         self._mask = np.zeros((1, 1), dtype=np.uint8)
         self.image.num_rotation_90 = num_rotation_90
         self.image.transpose = transpose
         self._force_monochrome = force_monochrome
+        self.live_mode_enabled.subscribe(self._on_live_mode_enabled_changed, run=False)
+        self.live_mode_enabled.put(bool(live_mode))
 
     ############## Live Mode Methods ##############
 
+    def start_live_mode(self) -> None:
+        self.live_mode_enabled.put(True)
+
+    def stop_live_mode(self) -> None:
+        self.live_mode_enabled.put(False)
+
     @property
     def mask(self) -> np.ndarray:
         """Return the current region of interest (ROI) for the camera."""
@@ -114,22 +126,15 @@ class IDSCamera(PSIDeviceBase):
             )
         self._mask = value
 
-    @property
-    def live_mode(self) -> bool:
-        """Return whether the camera is in live mode."""
-        return self._live_mode
-
-    @live_mode.setter
-    def live_mode(self, value: bool):
-        """Set the live mode for the camera."""
-        if value != self._live_mode:
-            if self.cam._connected is False:  # $ pylint: disable=protected-access
-                self.cam.on_connect()
-            self._live_mode = value
-            if value:
-                self._start_live()
-            else:
-                self._stop_live()
+    def _on_live_mode_enabled_changed(self, *args, value, **kwargs):
+        """Callback for when live mode is changed."""
+        enabled = bool(value)
+        if enabled and self.cam._connected is False:  # pylint: disable=protected-access
+            self.cam.on_connect()
+        if enabled:
+            self._start_live()
+        else:
+            self._stop_live()
 
     def set_rect_roi(self, x: int, y: int, width: int, height: int):
         """Set the rectangular region of interest (ROI) for the camera."""
@@ -196,7 +201,7 @@ class IDSCamera(PSIDeviceBase):
         """Connect to the camera."""
         self.cam.force_monochrome = self._force_monochrome
         self.cam.on_connect()
-        self.live_mode = self._inputs.get("live_mode", False)
+        self.live_mode_enabled.put(bool(self._inputs.get("live_mode", False)))
         self.set_rect_roi(0, 0, self.cam.cam.width.value, self.cam.cam.height.value)
 
     def on_destroy(self):
@@ -206,7 +211,7 @@ class IDSCamera(PSIDeviceBase):
 
     def on_trigger(self):
         """Handle the trigger event."""
-        if not self.live_mode:
+        if not bool(self.live_mode_enabled.get()):
             return
         image = self.image.get()
         if image is not None:

csaxs_bec/devices/omny/galil/lgalil_ophyd.py

@@ -15,7 +15,6 @@ from csaxs_bec.devices.omny.galil.galil_ophyd import (
     GalilAxesReferenced,
     GalilController,
     GalilMotorIsMoving,
-    GalilMotorResolution,
     GalilSetpointSignal,
     GalilSignalRO,
     retry_once,
@@ -24,6 +23,19 @@ from csaxs_bec.devices.omny.galil.galil_ophyd import (
 logger = bec_logger.logger
 
 
+class GalilMotorResolution(GalilSignalRO):
+    @retry_once
+    @threadlocked
+    def _socket_get(self):
+        if self.parent.axis_Id_numeric < 6:
+            return float(
+                self.controller.socket_put_and_receive(f"MG encpermm[{self.parent.axis_Id_numeric}]")
+            )
+        else:
+            return float(
+                self.controller.socket_put_and_receive(f"MG stppermm[{self.parent.axis_Id_numeric}]")
+            )
+
 class LamniGalilController(GalilController):
 
 
@@ -154,11 +166,18 @@ class LamniGalilReadbackSignal(GalilSignalRO):
         Returns:
             float: Readback value after adjusting for sign and motor resolution.
         """
-        current_pos = float(self.controller.socket_put_and_receive(f"TD{self.parent.axis_Id}"))
-        current_pos *= self.parent.sign
-        step_mm = self.parent.motor_resolution.get()
-        return current_pos / step_mm
-
+        if self.parent.axis_Id_numeric < 6:
+            current_pos = float(self.controller.socket_put_and_receive(f"TP{self.parent.axis_Id}"))
+            current_pos *= self.parent.sign
+            encoder_resolution = self.parent.motor_resolution.get()
+            logger.info(f"Read galil encoder position of axis {self.parent.axis_Id_numeric} to be TP {current_pos} with resolution {encoder_resolution}")
+            return current_pos / encoder_resolution
+        else:
+            current_pos = float(self.controller.socket_put_and_receive(f"TD{self.parent.axis_Id}"))
+            current_pos *= self.parent.sign
+            step_mm = self.parent.motor_resolution.get()
+            return current_pos / step_mm
+        
     def read(self):
         self._metadata["timestamp"] = time.time()
         val = super().read()

csaxs_bec/devices/omny/webcam_viewer.py

@@ -2,7 +2,7 @@ import requests
 import threading
 import cv2
 import numpy as np
-from ophyd import Device, Component as Cpt
+from ophyd import Device, Component as Cpt, Kind, Signal
 from ophyd_devices import PreviewSignal
 import traceback 
 
@@ -13,6 +13,13 @@ logger = bec_logger.logger
 class WebcamViewer(Device):
     USER_ACCESS = ["start_live_mode", "stop_live_mode"]
     preview = Cpt(PreviewSignal, ndim=2, num_rotation_90=0, transpose=False)
+    live_mode_enabled = Cpt(
+        Signal,
+        name="live_mode_enabled",
+        value=False,
+        doc="Enable or disable live mode.",
+        kind=Kind.config,
+    )
 
     def __init__(self, url:str, name:str, num_rotation_90=0, transpose=False, **kwargs) -> None:
         super().__init__(name=name, **kwargs)
@@ -21,20 +28,54 @@ class WebcamViewer(Device):
         self._update_thread = None
         self._buffer = b""
         self._shutdown_event = threading.Event()
+        self._live_mode_lock = threading.RLock()
         self.preview.num_rotation_90 = num_rotation_90
         self.preview.transpose = transpose
+        self.live_mode_enabled.subscribe(self._on_live_mode_enabled_changed, run=False)
 
     def start_live_mode(self) -> None:
-        if self._connection is not None:
-            return
-        self._update_thread = threading.Thread(target=self._update_loop, daemon=True)
-        self._update_thread.start()
+        self.live_mode_enabled.put(True)
+
+    def stop_live_mode(self) -> None:
+        self.live_mode_enabled.put(False)
+
+    def _on_live_mode_enabled_changed(self, *args, value, **kwargs) -> None:
+        self._apply_live_mode(bool(value))
+
+    def _apply_live_mode(self, enabled: bool) -> None:
+        with self._live_mode_lock:
+            if enabled:
+                if self._update_thread is not None and self._update_thread.is_alive():
+                    return
+                self._shutdown_event.clear()
+                self._update_thread = threading.Thread(target=self._update_loop, daemon=True)
+                self._update_thread.start()
+                return
+
+            if self._update_thread is None:
+                return
+            self._shutdown_event.set()
+            if self._connection is not None:
+                try:
+                    self._connection.close()
+                except Exception:  # pylint: disable=broad-except
+                    pass
+                self._connection = None
+            self._update_thread.join(timeout=2)
+            if self._update_thread.is_alive():
+                logger.warning("Webcam live mode thread did not stop within timeout.")
+                return
+            self._update_thread = None
+            self._buffer = b""
+            self._shutdown_event.clear()
 
     def _update_loop(self) -> None:
         while not self._shutdown_event.is_set():
             try:
-                self._connection = requests.get(self.url, stream=True)
+                self._connection = requests.get(self.url, stream=True, timeout=5)
                 for chunk in self._connection.iter_content(chunk_size=1024):
+                    if self._shutdown_event.is_set():
+                        break
                     self._buffer += chunk
                     start = self._buffer.find(b'\xff\xd8') # JPEG start
                     end = self._buffer.find(b'\xff\xd9') # JPEG end
@@ -50,16 +91,3 @@ class WebcamViewer(Device):
             except Exception as exc:
                 content = traceback.format_exc()
                 logger.error(f"Image update loop failed: {content}")
-
-    def stop_live_mode(self) -> None:
-        if self._connection is None:
-            return
-        self._shutdown_event.set()
-        if self._connection is not None:
-            self._connection.close()
-            self._connection = None
-        if self._update_thread is not None:
-            self._update_thread.join()
-            self._update_thread = None
-
-        self._shutdown_event.clear()

csaxs_bec/devices/omny/xray_epics_gui.py

@@ -1,74 +1,44 @@
-
-from ophyd import Component as Cpt
+import numpy as np
+from ophyd import Component as Cpt, Signal, EpicsSignal
 from ophyd import Device
-from ophyd import DynamicDeviceComponent as Dcpt
-from ophyd import EpicsSignal
 
 
+class OMNYXRayAlignGUI(Device):
 
-class OMNYXRayEpicsGUI(Device):
+    update_frame_acqdone = Cpt(Signal, value=0)
+    update_frame_acq = Cpt(Signal, value=0)
+    enable_mv_x = Cpt(Signal, value=0)
+    enable_mv_y = Cpt(Signal, value=0)
+    send_message = Cpt(Signal, value=0)
+    sample_name = Cpt(Signal, value=0)
+    angle = Cpt(Signal, value=0)
+    pixel_size = Cpt(Signal, value=0)
+    submit = Cpt(EpicsSignal, name="submit", read_pv="XOMNYI-XEYE-SUBMIT:0", auto_monitor=True)
+    step = Cpt(Signal, value=0)
+    recbg = Cpt(Signal, value=0)
+    mvx = Cpt(Signal, value=0)
+    mvy = Cpt(Signal, value=0)
 
-    save_frame = Cpt(
-    EpicsSignal, name="save_frame", read_pv="XOMNYI-XEYE-SAVFRAME:0",auto_monitor=True
-    )
-    update_frame_acqdone = Cpt(
-    EpicsSignal, name="update_frame_acqdone", read_pv="XOMNYI-XEYE-ACQDONE:0",auto_monitor=True
-    )
-    update_frame_acq = Cpt(
-    EpicsSignal, name="update_frame_acq", read_pv="XOMNYI-XEYE-ACQ:0",auto_monitor=True
-    )
-    width_y_dynamic = {
-        f"width_y_{i}": (EpicsSignal, f"XOMNYI-XEYE-YWIDTH_Y:{i}", {"auto_monitor": True}) for i in range(0, 11)
-    }
-    width_y = Dcpt(width_y_dynamic)
-    width_x_dynamic = {
-        f"width_x_{i}": (EpicsSignal, f"XOMNYI-XEYE-XWIDTH_X:{i}", {"auto_monitor": True}) for i in range(0, 11)
-    }
-    width_x = Dcpt(width_x_dynamic)
-    enable_mv_x = Cpt(
-    EpicsSignal, name="enable_mv_x", read_pv="XOMNYI-XEYE-ENAMVX:0",auto_monitor=True
-    )
-    enable_mv_y = Cpt(
-    EpicsSignal, name="enable_mv_y", read_pv="XOMNYI-XEYE-ENAMVY:0",auto_monitor=True
-    )
-    send_message = Cpt(
-    EpicsSignal, name="send_message", read_pv="XOMNYI-XEYE-MESSAGE:0.DESC",auto_monitor=True
-    )
-    sample_name  = Cpt(
-    EpicsSignal, name="sample_name", read_pv="XOMNYI-XEYE-SAMPLENAME:0.DESC",auto_monitor=True
-    )
-    angle = Cpt(
-    EpicsSignal, name="angle", read_pv="XOMNYI-XEYE-ANGLE:0",auto_monitor=True
-    )
-    pixel_size = Cpt(
-    EpicsSignal, name="pixel_size", read_pv="XOMNYI-XEYE-PIXELSIZE:0",auto_monitor=True
-    )
-    submit = Cpt(
-    EpicsSignal, name="submit", read_pv="XOMNYI-XEYE-SUBMIT:0",auto_monitor=True
-    )
-    step = Cpt(
-    EpicsSignal, name="step", read_pv="XOMNYI-XEYE-STEP:0",auto_monitor=True
-    )
-    xval_x_dynamic = {
-        f"xval_x_{i}": (EpicsSignal, f"XOMNYI-XEYE-XVAL_X:{i}", {"auto_monitor": True}) for i in range(0, 11)
-    }
-    xval_x = Dcpt(xval_x_dynamic)
-    yval_y_dynamic = {
-        f"yval_y_{i}": (EpicsSignal, f"XOMNYI-XEYE-YVAL_Y:{i}", {"auto_monitor": True}) for i in range(0, 11)
-    }
-    yval_y = Dcpt(yval_y_dynamic)
-    recbg = Cpt(
-    EpicsSignal, name="recbg", read_pv="XOMNYI-XEYE-RECBG:0",auto_monitor=True
-    )
-    stage_pos_x_dynamic = {
-        f"stage_pos_x_{i}": (EpicsSignal, f"XOMNYI-XEYE-STAGEPOSX:{i}", {"auto_monitor": True}) for i in range(1, 6)
-    }
-    stage_pos_x = Dcpt(stage_pos_x_dynamic)
-    mvx = Cpt(
-    EpicsSignal, name="mvx", read_pv="XOMNYI-XEYE-MVX:0",auto_monitor=True
-    )
-    mvy = Cpt(
-    EpicsSignal, name="mvy", read_pv="XOMNYI-XEYE-MVY:0",auto_monitor=True
-    )
+    fit_array = Cpt(Signal, value=np.zeros((3, 10)))
+    fit_params_x = Cpt(Signal, value=np.zeros((2, 3)))
+    fit_params_y = Cpt(Signal, value=np.zeros((2, 3)))
 
+    # Generate width_y_0 to width_y_10
+    for i in range(11):
+        locals()[f"width_y_{i}"] = Cpt(Signal, value=0)
 
+    # Generate width_x_0 to width_x_10
+    for i in range(11):
+        locals()[f"width_x_{i}"] = Cpt(Signal, value=0)
+
+    # Generate xval_x_0 to xval_x_10
+    for i in range(11):
+        locals()[f"xval_x_{i}"] = Cpt(Signal, value=0)
+
+    # Generate yval_y_0 to yval_y_10
+    for i in range(11):
+        locals()[f"yval_y_{i}"] = Cpt(Signal, value=0)
+
+    # Generate stage_pos_x_1 to stage_pos_x_5
+    for i in range(1, 6):
+        locals()[f"stage_pos_x_{i}"] = Cpt(Signal, value=0)

csaxs_bec/scans/LamNIFermatScan.py

@@ -169,6 +169,9 @@ class LamNIMixin:
 
         self.device_manager.devices.lsamx.read_only = True
         self.device_manager.devices.lsamy.read_only = True
+        
+        #update angle readback before start of the scan
+        yield from self.stubs.send_rpc_and_wait("lsamrot", "readback.get")
 
         yield from self.stubs.send_rpc_and_wait("rtx", "controller.feedback_enable_without_reset")
 

docs/user/ptychography/flomni.md

@@ -108,12 +108,17 @@ The nano-positioning is controlled by a feedback loop running on a real-time lin
 
 Once the loop has started, it is possible to start bec with the flOMNI configuration file.
 
+Starting bec with session will load the scripts
+`bec --session flomni`
+
+The flOMNI scripts can be loaded manually by  
+`from csaxs_bec.bec_ipython_client.plugins.flomni import Flomni`  
+`flomni =  Flomni(bec)`
+
 Loading the flOMNI configuration (this command will load the OMNY configuration only - isolated from the beamline)  
 `bec.config.update_session_with_file("/bec/csaxs_bec/csaxs_bec/device_configs/flomni_config.yaml")`
 
-Loading the flOMNI scripts  
-`from csaxs_bec.bec_ipython_client.plugins.flomni import Flomni`  
-`flomni =  Flomni(bec)`
+
 
 If the realtime system is restarted, bec will lose communication. To restart:  
 `flomni.rt_off()` … then wait a few seconds  
@@ -138,10 +143,14 @@ This script will first verify that the stages are not in an initialized state, a
 The positions of the optics stages are stored as stage parameters and are thus linked to the configuration file.  
 Example: The OSAx “in” position can be reviewed by `dev.fosax.user_parameter`  
 Update the value by (example "fosax", "in") by `dev.fosax.update_user_parameter({"in":value})`
+Important note: if these values are changed, they are not automatically stored to the config file and will only be available in the current session.
 
 `flomni.ffzp_info()` shows info about the available FZPs at the current energy of the beamline. Optional parameter is the photon _energy_ in keV.  
 Example: `flomni.ffzp_info(6.2)`
 
+Documents about availabe optics can be accessed by
+`flomni.flomnigui_docs`
+
 The [laser feedback](user.ptychography.flomni.laser_feedback) will be disabled and fine alignment lost if foptx/y are moved!
 
 Following functions exist to move the optics in and out, with self-explaining naming.

docs/user/ptychography/lamni.md

@@ -102,13 +102,16 @@ The nano-positioning is controlled by a feedback loop running on a real-time lin
 
 Once the loop has started, it is possible to start bec with the LamNI configuration file.
 
-Loading the LamNI configuration (this command will load the LamNI configuration only - isolated from the beamline)  
-`bec.config.update_session_with_file("/bec/csaxs_bec/csaxs_bec/device_configs/lamni_config.yaml")`
+Loading the LamNI scripts is done by starting bec as
+`bec --session lamni`
 
-Loading the LamNI scripts  
+The scripts can alternatively manually be loaded by  
 `from csaxs_bec.bec_ipython_client.plugins.LamNI import LamNI`
 `lamni = LamNI(bec)`
 
+Loading the LamNI configuration (this command will load the LamNI configuration only - isolated from the beamline)  
+`bec.config.update_session_with_file("/bec/csaxs_bec/csaxs_bec/device_configs/lamni_config.yaml")`
+
 If the realtime system is restarted, BEC will lose communication. To restart:  
 `lamni.rt_off()` … then wait a 10 seconds  
 `lamni.rt_on()`
@@ -152,6 +155,12 @@ The underlying scan function can be called as
 
 Use `scans.lamni_fermat_scan?`for detailed information. A prerequisite for scanning is a running feedback system.
 
+### GUI tools
+
+During operation the BEC GUI will show the relevant cameras or progress information. To manually switch view TAB completion on 'lamni.lamnigui_' will show all options to control the GUI. Most useful
+'lamni.lamnigui_show_progress()' will show the measurement progress GUI
+'lamnigui_show_xeyealign()' will show the XrayEye alignment GUI
+
 ### X-ray optics alignment
 
 The positions of the optics stages are stored as stage parameters and are thus linked to the configuration file.  

tests/tests_devices/test_ids_camera.py

@@ -54,7 +54,7 @@ def test_on_connected_sets_mask_and_live_mode(ids_camera):
 
 def test_on_trigger_roi_signal(ids_camera):
     """Test the on_trigger method to ensure it processes the ROI signal correctly."""
-    ids_camera.live_mode = True
+    ids_camera.start_live_mode()
     test_image = np.array([[2, 4], [6, 8]])
     test_mask = np.array([[1, 0], [0, 1]], dtype=np.uint8)
     ids_camera.mask = test_mask

tests/tests_scans/test_lamni_fermat_scan.py

@@ -229,6 +229,22 @@ def device_manager_mock():
                         "kwargs": {},
                     },
                 ),
+                messages.DeviceInstructionMessage(
+                    metadata={
+                        "readout_priority": "monitored",
+                        "RID": "1234",
+                        "device_instr_id": "diid",
+                    },
+                    device="lsamrot",
+                    action="rpc",
+                    parameter={
+                        "device": "lsamrot",
+                        "func": "readback.get",
+                        "rpc_id": "rpc_id",
+                        "args": (),
+                        "kwargs": {},
+                    },
+                ),
                 messages.DeviceInstructionMessage(
                     metadata={
                         "readout_priority": "monitored",