alignment scans to scilog

csaxs_bec/bec_ipython_client/plugins/flomni/flomni.py

@@ -1596,6 +1596,8 @@ class Flomni(
     def tomo_alignment_scan(self):
         """
         Performs a tomogram alignment scan.
+        Collects all scan numbers acquired during the alignment, prints them at the end,
+        and creates a BEC scilog text entry summarising the alignment scan numbers.
         """
         if self.get_alignment_offset(0) == (0, 0, 0):
             print("It appears that the xrayeye alignemtn was not performend or loaded. Aborting.")
@@ -1610,6 +1612,7 @@ class Flomni(
         )
 
         start_angle = 0
+        alignment_scan_numbers = []
 
         angle_end = start_angle + 180
         for angle in np.linspace(start_angle, angle_end, num=int(180 / 45) + 1, endpoint=True):
@@ -1634,13 +1637,28 @@ class Flomni(
 
                 end_scan_number = bec.queue.next_scan_number
                 for scan_nr in range(start_scan_number, end_scan_number):
-                    self._write_tomo_scan_number(scan_nr, angle, 0)
+                    #self._write_tomo_scan_number(scan_nr, angle, 0)
+                    alignment_scan_numbers.append(scan_nr)
 
         umv(dev.fsamroy, 0)
         self.OMNYTools.printgreenbold(
             "\n\nAlignment scan finished. Please run SPEC_ptycho_align and load the new fit by flomni.read_alignment_offset() ."
         )
 
+        # summary of alignment scan numbers
+        scan_list_str = ", ".join(str(s) for s in alignment_scan_numbers)
+        #print(f"\nAlignment scan numbers ({len(alignment_scan_numbers)} total): {scan_list_str}")
+
+        # BEC scilog entry (no logo)
+        scilog_content = (
+            f"Alignment scan finished.\n"
+            f"Sample: {self.sample_name}\n"
+            f"Number of alignment scans: {len(alignment_scan_numbers)}\n"
+            f"Alignment scan numbers: {scan_list_str}\n"
+        )
+        print(scliog_content)
+        bec.messaging.scilog.new().add_text(scilog_content.replace("\n", "<br>")).send()
+
     def _write_subtomo_to_scilog(self, subtomo_number):
         pass
         # dev = builtins.__dict__.get("dev")