first version ids

This commit is contained in:
Holler Mirko
2024-09-18 12:35:49 +02:00
committed by wakonig_k
parent a07a56822f
commit 4282d4ead6
4 changed files with 594 additions and 85 deletions

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@@ -1,95 +1,111 @@
############################################################
#################### flOMNI RT motors ######################
#################### IDS Camera ######################
############################################################
rtx:
description: OMNY rt
deviceClass: csaxs_bec.devices.omny.rt.rt_omny_ophyd.RtOMNYMotor
cam1:
description: Camera1
deviceClass: csaxs_bec.devices.ids_cameras.ids_camera.IDSCamera
deviceConfig:
axis_Id: A
host: mpc3217.psi.ch
port: 3333
sign: 1
camera_ID: 202
bits_per_pixel: 24
channels: 3
m_n_colormode: 1
enabled: true
onFailure: buffer
readOnly: false
readoutPriority: on_request
userParameter:
low_signal: 11000
min_signal: 10000
rt_pid_voltage: -0.06219
rty:
description: OMNY rt
deviceClass: csaxs_bec.devices.omny.rt.rt_omny_ophyd.RtOMNYMotor
deviceConfig:
axis_Id: B
host: mpc3217.psi.ch
port: 3333
sign: 1
enabled: true
onFailure: buffer
readOnly: false
readoutPriority: on_request
userParameter:
tomo_additional_offsety: 0
rtz:
description: OMNY rt
deviceClass: csaxs_bec.devices.omny.rt.rt_omny_ophyd.RtOMNYMotor
deviceConfig:
axis_Id: C
host: mpc3217.psi.ch
port: 3333
sign: 1
enabled: true
onFailure: buffer
readOnly: false
readoutPriority: on_request
############################################################
##################### OMNY samples #########################
############################################################
omny_samples:
description: OMNYSampleStorage
deviceClass: csaxs_bec.devices.omny.omny_sample_storage.OMNYSampleStorage
deviceConfig: {}
enabled: true
onFailure: buffer
readOnly: false
readoutPriority: baseline
############################################################
##################### OMNY samples #########################
############################################################
omny_vcs:
description: OMNYVCS
deviceClass: csaxs_bec.devices.omny.omny_vcs.OMNYVCS
deviceConfig: {}
enabled: true
onFailure: buffer
readOnly: false
readoutPriority: baseline
############################################################
##################### OMNY dewar ###########################
############################################################
omny_dewar:
description: OMNY Dewar Information
deviceClass: csaxs_bec.devices.omny.omny_dewar.OMNYDewar
deviceConfig: {}
enabled: true
onFailure: buffer
readOnly: false
readoutPriority: baseline
readoutPriority: async
############################################################
##################### OMNY temperatures ####################
############################################################
omny_temperatures:
description: OMNY Temperatures and pressures
deviceClass: csaxs_bec.devices.omny.omny_temperatures.OMNYTemperatures
deviceConfig: {}
enabled: true
onFailure: buffer
readOnly: false
readoutPriority: baseline
# ############################################################
# #################### flOMNI RT motors ######################
# ############################################################
# rtx:
# description: OMNY rt
# deviceClass: csaxs_bec.devices.omny.rt.rt_omny_ophyd.RtOMNYMotor
# deviceConfig:
# axis_Id: A
# host: mpc3217.psi.ch
# port: 3333
# sign: 1
# enabled: true
# onFailure: buffer
# readOnly: false
# readoutPriority: on_request
# userParameter:
# low_signal: 11000
# min_signal: 10000
# rt_pid_voltage: -0.06219
# rty:
# description: OMNY rt
# deviceClass: csaxs_bec.devices.omny.rt.rt_omny_ophyd.RtOMNYMotor
# deviceConfig:
# axis_Id: B
# host: mpc3217.psi.ch
# port: 3333
# sign: 1
# enabled: true
# onFailure: buffer
# readOnly: false
# readoutPriority: on_request
# userParameter:
# tomo_additional_offsety: 0
# rtz:
# description: OMNY rt
# deviceClass: csaxs_bec.devices.omny.rt.rt_omny_ophyd.RtOMNYMotor
# deviceConfig:
# axis_Id: C
# host: mpc3217.psi.ch
# port: 3333
# sign: 1
# enabled: true
# onFailure: buffer
# readOnly: false
# readoutPriority: on_request
# ############################################################
# ##################### OMNY samples #########################
# ############################################################
# omny_samples:
# description: OMNYSampleStorage
# deviceClass: csaxs_bec.devices.omny.omny_sample_storage.OMNYSampleStorage
# deviceConfig: {}
# enabled: true
# onFailure: buffer
# readOnly: false
# readoutPriority: baseline
# ############################################################
# ##################### OMNY samples #########################
# ############################################################
# omny_vcs:
# description: OMNYVCS
# deviceClass: csaxs_bec.devices.omny.omny_vcs.OMNYVCS
# deviceConfig: {}
# enabled: true
# onFailure: buffer
# readOnly: false
# readoutPriority: baseline
# ############################################################
# ##################### OMNY dewar ###########################
# ############################################################
# omny_dewar:
# description: OMNY Dewar Information
# deviceClass: csaxs_bec.devices.omny.omny_dewar.OMNYDewar
# deviceConfig: {}
# enabled: true
# onFailure: buffer
# readOnly: false
# readoutPriority: baseline
# ############################################################
# ##################### OMNY temperatures ####################
# ############################################################
# omny_temperatures:
# description: OMNY Temperatures and pressures
# deviceClass: csaxs_bec.devices.omny.omny_temperatures.OMNYTemperatures
# deviceConfig: {}
# enabled: true
# onFailure: buffer
# readOnly: false
# readoutPriority: baseline
############################################################
##################### OMNY Galil motors ####################

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from ophyd import Device
from ophyd_devices.interfaces.base_classes.psi_detector_base import CustomDetectorMixin, PSIDetectorBase
from pyueye import ueye
from ophyd_devices.sim.sim_signals import SetableSignal
from ophyd import Kind, Component as Cpt
import threading
import numpy as np
import time
class IDSCustomPrepare(CustomDetectorMixin):
USER_ACCESS = ["pyueye"]
pyueye = ueye
def __init__(self, *_args, parent: Device = None, **_kwargs) -> None:
super().__init__(*_args, parent=parent, **_kwargs)
self.ueye = ueye
self.h_cam = None
self.s_info =None
self._live_data_thread = None
def on_connection_established(self):
self.hCam = self.ueye.HIDS(202) #0: first available camera; 1-254: The camera with the specified camera ID
self.sInfo = self.ueye.SENSORINFO()
self.cInfo = self.ueye.CAMINFO()
self.pcImageMemory = self.ueye.c_mem_p()
self.MemID = self.ueye.int()
self.rectAOI = self.ueye.IS_RECT()
self.pitch = self.ueye.INT()
self.nBitsPerPixel = self.ueye.INT(self.parent.bits_per_pixel) #24: bits per pixel for color mode; take 8 bits per pixel for monochrome
self.channels = self.parent.channels #3: channels for color mode(RGB); take 1 channel for monochrome
self.m_nColorMode = self.ueye.INT(self.parent.m_n_colormode) # Y8/RGB16/RGB24/REG32 (1 for our color cameras)
self.bytes_per_pixel = int(self.nBitsPerPixel / 8)
# Starts the driver and establishes the connection to the camera
nRet = self.ueye.is_InitCamera(self.hCam, None)
if nRet != self.ueye.IS_SUCCESS:
print("is_InitCamera ERROR")
# Reads out the data hard-coded in the non-volatile camera memory and writes it to the data structure that cInfo points to
nRet = self.ueye.is_GetCameraInfo(self.hCam, self.cInfo)
if nRet != self.ueye.IS_SUCCESS:
print("is_GetCameraInfo ERROR")
# You can query additional information about the sensor type used in the camera
nRet = self.ueye.is_GetSensorInfo(self.hCam, self.sInfo)
if nRet != self.ueye.IS_SUCCESS:
print("is_GetSensorInfo ERROR")
nRet = self.ueye.is_ResetToDefault(self.hCam)
if nRet != self.ueye.IS_SUCCESS:
print("is_ResetToDefault ERROR")
# Set display mode to DIB
nRet = self.ueye.is_SetDisplayMode(self.hCam, self.ueye.IS_SET_DM_DIB)
# Set the right color mode
if int.from_bytes(self.sInfo.nColorMode.value, byteorder='big') == self.ueye.IS_COLORMODE_BAYER:
# setup the color depth to the current windows setting
self.ueye.is_GetColorDepth(self.hCam, self.nBitsPerPixel, self.m_nColorMode)
bytes_per_pixel = int(self.nBitsPerPixel / 8)
print("IS_COLORMODE_BAYER: ", )
print("\tm_nColorMode: \t\t", self.m_nColorMode)
print("\tnBitsPerPixel: \t\t", self.nBitsPerPixel)
print("\tbytes_per_pixel: \t\t", bytes_per_pixel)
print()
elif int.from_bytes(self.sInfo.nColorMode.value, byteorder='big') == self.ueye.IS_COLORMODE_CBYCRY:
# for color camera models use RGB32 mode
m_nColorMode = ueye.IS_CM_BGRA8_PACKED
nBitsPerPixel = ueye.INT(32)
bytes_per_pixel = int(self.nBitsPerPixel / 8)
print("IS_COLORMODE_CBYCRY: ", )
print("\tm_nColorMode: \t\t", m_nColorMode)
print("\tnBitsPerPixel: \t\t", nBitsPerPixel)
print("\tbytes_per_pixel: \t\t", bytes_per_pixel)
print()
elif int.from_bytes(self.sInfo.nColorMode.value, byteorder='big') == self.ueye.IS_COLORMODE_MONOCHROME:
# for color camera models use RGB32 mode
m_nColorMode = self.ueye.IS_CM_MONO8
nBitsPerPixel = self.ueye.INT(8)
bytes_per_pixel = int(nBitsPerPixel / 8)
print("IS_COLORMODE_MONOCHROME: ", )
print("\tm_nColorMode: \t\t", m_nColorMode)
print("\tnBitsPerPixel: \t\t", nBitsPerPixel)
print("\tbytes_per_pixel: \t\t", bytes_per_pixel)
print()
else:
# for monochrome camera models use Y8 mode
m_nColorMode = self.ueye.IS_CM_MONO8
nBitsPerPixel = self.ueye.INT(8)
bytes_per_pixel = int(nBitsPerPixel / 8)
print("else")
# Can be used to set the size and position of an "area of interest"(AOI) within an image
nRet = self.ueye.is_AOI(self.hCam, ueye.IS_AOI_IMAGE_GET_AOI, self.rectAOI, self.ueye.sizeof(self.rectAOI))
if nRet != self.ueye.IS_SUCCESS:
print("is_AOI ERROR")
self.width = self.rectAOI.s32Width
self.height = self.rectAOI.s32Height
# Prints out some information about the camera and the sensor
print("Camera model:\t\t", self.sInfo.strSensorName.decode('utf-8'))
print("Camera serial no.:\t", self.cInfo.SerNo.decode('utf-8'))
print("Maximum image width:\t", self.width)
print("Maximum image height:\t", self.height)
print()
#---------------------------------------------------------------------------------------------------------------------------------------
# Allocates an image memory for an image having its dimensions defined by width and height and its color depth defined by nBitsPerPixel
nRet = self.ueye.is_AllocImageMem(self.hCam, self.width, self.height, self.nBitsPerPixel, self.pcImageMemory, self.MemID)
if nRet != self.ueye.IS_SUCCESS:
print("is_AllocImageMem ERROR")
else:
# Makes the specified image memory the active memory
nRet = self.ueye.is_SetImageMem(self.hCam, self.pcImageMemory, self.MemID)
if nRet != self.ueye.IS_SUCCESS:
print("is_SetImageMem ERROR")
else:
# Set the desired color mode
nRet = self.ueye.is_SetColorMode(self.hCam, self.m_nColorMode)
# Activates the camera's live video mode (free run mode)
nRet = self.ueye.is_CaptureVideo(self.hCam, self.ueye.IS_DONT_WAIT)
if nRet != self.ueye.IS_SUCCESS:
print("is_CaptureVideo ERROR")
# Enables the queue mode for existing image memory sequences
nRet = self.ueye.is_InquireImageMem(self.hCam, self.pcImageMemory, self.MemID, self.width, self.height, self.nBitsPerPixel, self.pitch)
if nRet != self.ueye.IS_SUCCESS:
print("is_InquireImageMem ERROR")
else:
print("Press q to leave the programm")
startmeasureframerate=True
Gain = False
#start thread to receive data
self._start_data_thread()
def _start_data_thread(self):
self._live_data_thread = threading.Thread(target=self._receive_data_from_camera, daemon = True)
self._live_data_thread.start()
def _receive_data_from_camera(self):
while True:
# In order to display the image in an OpenCV window we need to...
# ...extract the data of our image memory
array = ueye.get_data(self.pcImageMemory, self.width, self.height, self.nBitsPerPixel, self.pitch, copy=False)
# bytes_per_pixel = int(nBitsPerPixel / 8)
# ...reshape it in an numpy array...
frame = np.reshape(array,(self.height.value, self.width.value, self.bytes_per_pixel))
self.parent.image_data.put(frame)
if self.parent._destroyed is True:
break
time.sleep(0.1)
def on_trigger(self):
self.parent._run_subs(self.parent.SUB_MONITOR, value=self.parent.image_data.get())
class IDSCamera(PSIDetectorBase):
USER_ACCESS = ["custom_prepare"]
custom_prepare_cls = IDSCustomPrepare
image_data = Cpt(SetableSignal, value=0, kind=Kind.omitted)
SUB_MONITOR = "device_monitor_2d"
_default_sub = SUB_MONITOR
def __init__(self,
prefix="",
*,
name:str,
camera_ID: int,
bits_per_pixel: int,
channels: int,
m_n_colormode: int,
kind=None,
parent=None,
device_manager=None,
**kwargs):
super().__init__(prefix, name=name, kind=kind, parent=parent, device_manager=device_manager, **kwargs)
self.camera_ID = camera_ID
self.bits_per_pixel = bits_per_pixel
self.channels = channels
self.m_n_colormode = m_n_colormode
self.wait_for_connection()
def wait_for_connection(self, all_signals=False, timeout=10):
super().wait_for_connection(all_signals, timeout)
self.custom_prepare.on_connection_established()
"""from pyueye import ueye
import numpy as np
import cv2
import sys
import time
#---------------------------------------------------------------------------------------------------------------------------------------
#Variables
hCam = ueye.HIDS(202) #0: first available camera; 1-254: The camera with the specified camera ID
sInfo = ueye.SENSORINFO()
cInfo = ueye.CAMINFO()
pcImageMemory = ueye.c_mem_p()
MemID = ueye.int()
rectAOI = ueye.IS_RECT()
pitch = ueye.INT()
nBitsPerPixel = ueye.INT(24) #24: bits per pixel for color mode; take 8 bits per pixel for monochrome
channels = 3 #3: channels for color mode(RGB); take 1 channel for monochrome
m_nColorMode = ueye.INT(1) # Y8/RGB16/RGB24/REG32 (1 for our color cameras)
bytes_per_pixel = int(nBitsPerPixel / 8)
ids_cam
...
deviceConfig:
camera_ID: 202
bits_per_pixel: 24
channels: 3
m_n_colormode: 1
#---------------------------------------------------------------------------------------------------------------------------------------
print("START")
print()
# Starts the driver and establishes the connection to the camera
nRet = ueye.is_InitCamera(hCam, None)
if nRet != ueye.IS_SUCCESS:
print("is_InitCamera ERROR")
# Reads out the data hard-coded in the non-volatile camera memory and writes it to the data structure that cInfo points to
nRet = ueye.is_GetCameraInfo(hCam, cInfo)
if nRet != ueye.IS_SUCCESS:
print("is_GetCameraInfo ERROR")
# You can query additional information about the sensor type used in the camera
nRet = ueye.is_GetSensorInfo(hCam, sInfo)
if nRet != ueye.IS_SUCCESS:
print("is_GetSensorInfo ERROR")
nRet = ueye.is_ResetToDefault( hCam)
if nRet != ueye.IS_SUCCESS:
print("is_ResetToDefault ERROR")
# Set display mode to DIB
nRet = ueye.is_SetDisplayMode(hCam, ueye.IS_SET_DM_DIB)
# Set the right color mode
if int.from_bytes(sInfo.nColorMode.value, byteorder='big') == ueye.IS_COLORMODE_BAYER:
# setup the color depth to the current windows setting
ueye.is_GetColorDepth(hCam, nBitsPerPixel, m_nColorMode)
bytes_per_pixel = int(nBitsPerPixel / 8)
print("IS_COLORMODE_BAYER: ", )
print("\tm_nColorMode: \t\t", m_nColorMode)
print("\tnBitsPerPixel: \t\t", nBitsPerPixel)
print("\tbytes_per_pixel: \t\t", bytes_per_pixel)
print()
elif int.from_bytes(sInfo.nColorMode.value, byteorder='big') == ueye.IS_COLORMODE_CBYCRY:
# for color camera models use RGB32 mode
m_nColorMode = ueye.IS_CM_BGRA8_PACKED
nBitsPerPixel = ueye.INT(32)
bytes_per_pixel = int(nBitsPerPixel / 8)
print("IS_COLORMODE_CBYCRY: ", )
print("\tm_nColorMode: \t\t", m_nColorMode)
print("\tnBitsPerPixel: \t\t", nBitsPerPixel)
print("\tbytes_per_pixel: \t\t", bytes_per_pixel)
print()
elif int.from_bytes(sInfo.nColorMode.value, byteorder='big') == ueye.IS_COLORMODE_MONOCHROME:
# for color camera models use RGB32 mode
m_nColorMode = ueye.IS_CM_MONO8
nBitsPerPixel = ueye.INT(8)
bytes_per_pixel = int(nBitsPerPixel / 8)
print("IS_COLORMODE_MONOCHROME: ", )
print("\tm_nColorMode: \t\t", m_nColorMode)
print("\tnBitsPerPixel: \t\t", nBitsPerPixel)
print("\tbytes_per_pixel: \t\t", bytes_per_pixel)
print()
else:
# for monochrome camera models use Y8 mode
m_nColorMode = ueye.IS_CM_MONO8
nBitsPerPixel = ueye.INT(8)
bytes_per_pixel = int(nBitsPerPixel / 8)
print("else")
# Can be used to set the size and position of an "area of interest"(AOI) within an image
nRet = ueye.is_AOI(hCam, ueye.IS_AOI_IMAGE_GET_AOI, rectAOI, ueye.sizeof(rectAOI))
if nRet != ueye.IS_SUCCESS:
print("is_AOI ERROR")
width = rectAOI.s32Width
height = rectAOI.s32Height
# Prints out some information about the camera and the sensor
print("Camera model:\t\t", sInfo.strSensorName.decode('utf-8'))
print("Camera serial no.:\t", cInfo.SerNo.decode('utf-8'))
print("Maximum image width:\t", width)
print("Maximum image height:\t", height)
print()
#---------------------------------------------------------------------------------------------------------------------------------------
# Allocates an image memory for an image having its dimensions defined by width and height and its color depth defined by nBitsPerPixel
nRet = ueye.is_AllocImageMem(hCam, width, height, nBitsPerPixel, pcImageMemory, MemID)
if nRet != ueye.IS_SUCCESS:
print("is_AllocImageMem ERROR")
else:
# Makes the specified image memory the active memory
nRet = ueye.is_SetImageMem(hCam, pcImageMemory, MemID)
if nRet != ueye.IS_SUCCESS:
print("is_SetImageMem ERROR")
else:
# Set the desired color mode
nRet = ueye.is_SetColorMode(hCam, m_nColorMode)
# Activates the camera's live video mode (free run mode)
nRet = ueye.is_CaptureVideo(hCam, ueye.IS_DONT_WAIT)
if nRet != ueye.IS_SUCCESS:
print("is_CaptureVideo ERROR")
# Enables the queue mode for existing image memory sequences
nRet = ueye.is_InquireImageMem(hCam, pcImageMemory, MemID, width, height, nBitsPerPixel, pitch)
if nRet != ueye.IS_SUCCESS:
print("is_InquireImageMem ERROR")
else:
print("Press q to leave the programm")
startmeasureframerate=True
Gain = False
#---------------------------------------------------------------------------------------------------------------------------------------
# Continuous image display
while(nRet == ueye.IS_SUCCESS):
# In order to display the image in an OpenCV window we need to...
# ...extract the data of our image memory
array = ueye.get_data(pcImageMemory, width, height, nBitsPerPixel, pitch, copy=False)
# bytes_per_pixel = int(nBitsPerPixel / 8)
# ...reshape it in an numpy array...
frame = np.reshape(array,(height.value, width.value, bytes_per_pixel))
# ...resize the image by a half
frame = cv2.resize(frame,(0,0),fx=0.5, fy=0.5)
#---------------------------------------------------------------------------------------------------------------------------------------
#Include image data processing here
#---------------------------------------------------------------------------------------------------------------------------------------
#...and finally display it
cv2.imshow("SimpleLive_Python_uEye_OpenCV", frame)
if startmeasureframerate:
starttime = time.time()
startmeasureframerate=False
framenumber=0
if time.time() > starttime+5:
print(f"Caught {framenumber/5} frames per second")
startmeasureframerate=True
Gain = ~Gain
if Gain:
nRet = ueye.is_SetGainBoost(hCam, 1)
else:
nRet = ueye.is_SetGainBoost(hCam, 0)
print(f"Gain setting status {nRet}")
#...and finally display it
cv2.imshow("SimpleLive_Python_uEye_OpenCV", frame)
framenumber+=1
time.sleep(0.1)
# Press q if you want to end the loop
if (cv2.waitKey(1) & 0xFF) == ord('q'):
break
#---------------------------------------------------------------------------------------------------------------------------------------
# Releases an image memory that was allocated using is_AllocImageMem() and removes it from the driver management
ueye.is_FreeImageMem(hCam, pcImageMemory, MemID)
# Disables the hCam camera handle and releases the data structures and memory areas taken up by the uEye camera
ueye.is_ExitCamera(hCam)
# Destroys the OpenCv windows
cv2.destroyAllWindows()
print()
print("END")
"""

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import time
import numpy as np
from bec_lib import bec_logger
from ophyd import Kind, Signal
from ophyd.utils import ReadOnlyError
from ophyd_devices.utils.bec_device_base import BECDeviceBase
logger = bec_logger.logger
# Readout precision for Setable/ReadOnlySignal signals
PRECISION = 3
class ReadOnlySignal(Signal):
"""Setable signal for simulated devices.
The signal will store the value in sim_state of the SimulatedData class of the parent device.
It will also return the value from sim_state when get is called. Compared to the ReadOnlySignal,
this signal can be written to.
The setable signal inherits from the Signal class of ophyd, thus the class attribute needs to be
initiated as a Component (class from ophyd).
>>> signal = SetableSignal(name="signal", parent=parent, value=0)
Parameters
----------
name (string) : Name of the signal
parent (object) : Parent object of the signal, default none.
value (any) : Initial value of the signal, default 0.
kind (int) : Kind of the signal, default Kind.normal.
precision (float) : Precision of the signal, default PRECISION.
"""
def __init__(
self,
name: str,
*args,
fcn: callable,
kind: int = Kind.normal,
precision: float = PRECISION,
**kwargs,
):
super().__init__(*args, name=name, value=value, kind=kind, **kwargs)
self._metadata.update(connected=True, write_access=False)
self._value = None
self.precision = precision
self.fcn = fcn
# pylint: disable=arguments-differ
def get(self):
"""Get the current position of the simulated device.
Core function for signal.
"""
self._value = self.fcn()
return self._value
# pylint: disable=arguments-differ
def put(self, value):
"""Put the value to the simulated device.
Core function for signal.
"""
self._update_sim_state(value)
self._value = value
def describe(self):
"""Describe the readback signal.
Core function for signal.
"""
res = super().describe()
if self.precision is not None:
res[self.name]["precision"] = self.precision
return res
@property
def timestamp(self):
"""Timestamp of the readback value"""
return self._get_timestamp()