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Author SHA1 Message Date
a523e66536 fix: prel. support for config_plotter with widgets instead of items 2023-07-13 17:29:55 +02:00
semantic-release
1c237f4bf8 0.2.0
Automatically generated by python-semantic-release
2023-07-13 15:18:19 +00:00
550c36860e refactor: Added .git_hook 2023-07-13 17:17:22 +02:00
34e5ed2cf7 feat: move ivan's qtwidgets to bec-widgets 2023-07-13 17:16:34 +02:00
8 changed files with 312 additions and 30 deletions

2
.git_hooks/pre-commit Executable file
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@@ -0,0 +1,2 @@
black --line-length=100 $(git diff --cached --name-only --diff-filter=ACM -- '***.py')
git add $(git diff --cached --name-only --diff-filter=ACM -- '***.py')

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@@ -2,6 +2,12 @@
<!--next-version-placeholder-->
## v0.2.0 (2023-07-13)
### Feature
* Move ivan's qtwidgets to bec-widgets ([`34e5ed2`](https://gitlab.psi.ch/bec/bec-widgets/-/commit/34e5ed2cf7e6128a51c110db8870d9560f2b2831))
## v0.1.0 (2023-07-11)
### Feature

98
bec_widgets/cli.py Normal file
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@@ -0,0 +1,98 @@
import argparse
import os
from threading import RLock
from PyQt5 import uic
from PyQt5.QtCore import pyqtSignal
from PyQt5.QtWidgets import QApplication, QMainWindow
from scan_plot import BECScanPlot
from bec_lib.core import BECMessage, MessageEndpoints, RedisConnector
class BEC_UI(QMainWindow):
new_scan_data = pyqtSignal(dict)
new_dap_data = pyqtSignal(dict) # signal per proc instance?
new_scan = pyqtSignal()
def __init__(self, uipath):
super().__init__()
self._scan_channels = set()
self._dap_channels = set()
self._scan_thread = None
self._dap_threads = []
ui = uic.loadUi(uipath, self)
_, fname = os.path.split(uipath)
self.setWindowTitle(fname)
for sp in ui.findChildren(BECScanPlot):
for chan in (sp.x_channel, *sp.y_channel_list):
if chan.startswith("dap."):
chan = chan.partition("dap.")[-1]
self._dap_channels.add(chan)
else:
self._scan_channels.add(chan)
sp.initialize() # TODO: move this elsewhere?
self.new_scan_data.connect(sp.redraw_scan) # TODO: merge
self.new_dap_data.connect(sp.redraw_dap)
self.new_scan.connect(sp.clearData)
# Scan setup
self._scan_id = None
scan_lock = RLock()
def _scan_cb(msg):
msg = BECMessage.ScanMessage.loads(msg.value)
with scan_lock:
scan_id = msg[0].content["scanID"]
if self._scan_id != scan_id:
self._scan_id = scan_id
self.new_scan.emit()
self.new_scan_data.emit(msg[0].content["data"])
bec_connector = RedisConnector("localhost:6379")
if self._scan_channels:
scan_readback = MessageEndpoints.scan_segment()
self._scan_thread = bec_connector.consumer(
topics=scan_readback,
cb=_scan_cb,
)
self._scan_thread.start()
# DAP setup
def _proc_cb(msg):
msg = BECMessage.ProcessedDataMessage.loads(msg.value)
self.new_dap_data.emit(msg.content["data"])
if self._dap_channels:
for chan in self._dap_channels:
proc_ep = MessageEndpoints.processed_data(chan)
dap_thread = bec_connector.consumer(topics=proc_ep, cb=_proc_cb)
dap_thread.start()
self._dap_threads.append(dap_thread)
self.show()
def main():
parser = argparse.ArgumentParser(
prog="bec-pyqt", formatter_class=argparse.ArgumentDefaultsHelpFormatter
)
parser.add_argument("uipath", type=str, help="Path to a BEC ui file")
args, rem = parser.parse_known_args()
app = QApplication(rem)
BEC_UI(args.uipath)
app.exec_()
if __name__ == "__main__":
main()

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@@ -2,11 +2,12 @@ from typing import List
import numpy as np
import pyqtgraph as pg
from PyQt5.QtWidgets import QApplication, QGridLayout, QSizePolicy, QWidget
from pyqtgraph import mkPen
from pyqtgraph.Qt import QtCore, QtWidgets
from pyqtgraph.Qt import QtCore
class ConfigPlotter(pg.GraphicsWidget):
class ConfigPlotter(QWidget):
"""
ConfigPlotter is a widget that can be used to plot data from multiple channels
in a grid layout. The layout is specified by a list of dicts, where each dict
@@ -28,7 +29,7 @@ class ConfigPlotter(pg.GraphicsWidget):
"""
def __init__(self, configs: List[dict], parent=None):
super().__init__(parent)
super(ConfigPlotter, self).__init__()
self.configs = configs
self.plots = {}
self._init_ui()
@@ -37,63 +38,73 @@ class ConfigPlotter(pg.GraphicsWidget):
def _init_ui(self):
pg.setConfigOption("background", "w")
pg.setConfigOption("foreground", "k")
self.layout = QGridLayout()
self.setLayout(self.layout)
self.pen = mkPen(color=(56, 76, 107), width=4, style=QtCore.Qt.SolidLine)
self.view = pg.GraphicsView()
self.view.setAntialiasing(True)
self.view.show()
self.layout = pg.GraphicsLayout()
self.view.setCentralWidget(self.layout)
self.show()
def _init_plots(self):
for config in self.configs:
channels = config["config"]["channels"]
for channel in channels:
item = pg.PlotItem()
self.layout.addItem(
item,
row=config["y"],
col=config["x"],
rowspan=config["rows"],
colspan=config["cols"],
)
# call the corresponding init function, e.g. init_plotitem
init_func = getattr(self, f"init_{config['config']['item']}")
init_func(channel, config["config"], item)
init_func(channel, config)
# self.init_ImageItem(channel, config["config"], item)
def init_PlotItem(self, channel: str, config: dict, item: pg.GraphicsItem):
def init_PlotItem(self, channel: str, config: dict):
"""
Initialize a PlotItem
Args:
channel(str): channel to plot
config(dict): config dict for the channel
item(pg.GraphicsItem): PlotItem to plot the data
"""
# pylint: disable=invalid-name
plot_data = item.plot(np.random.rand(100), pen=self.pen)
item.setLabel("left", channel)
self.plots[channel] = {"item": item, "plot_data": plot_data}
plot_widget = pg.PlotWidget()
plot_widget.setSizePolicy(QSizePolicy.Fixed, QSizePolicy.Fixed)
self.layout.addWidget(plot_widget, config["y"], config["x"], config["rows"], config["cols"])
plot_data = plot_widget.plot(np.random.rand(100), pen=self.pen)
# item.setLabel("left", channel)
# self.plots[channel] = {"item": item, "plot_data": plot_data}
def init_ImageItem(self, channel: str, config: dict, item: pg.GraphicsItem):
def init_ImageItem(self, channel: str, config: dict):
"""
Initialize an ImageItem
Args:
channel(str): channel to plot
config(dict): config dict for the channel
item(pg.GraphicsItem): ImageItem to plot the data
"""
# pylint: disable=invalid-name
item = pg.PlotItem()
self.layout.addItem(
item,
row=config["y"],
col=config["x"],
rowspan=config["rows"],
colspan=config["cols"],
)
img = pg.ImageItem()
item.addItem(img)
img.setImage(np.random.rand(100, 100))
self.plots[channel] = {"item": item, "plot_data": img}
def init_ImageView(self, channel: str, config: dict):
"""
Initialize an ImageView
Args:
channel(str): channel to plot
config(dict): config dict for the channel
"""
# pylint: disable=invalid-name
img = pg.ImageView()
img.setImage(np.random.rand(100, 100))
self.layout.addWidget(img, config["y"], config["x"], config["rows"], config["cols"])
self.plots[channel] = {"item": img, "plot_data": img}
if __name__ == "__main__":
import sys
@@ -118,10 +129,10 @@ if __name__ == "__main__":
"rows": 2,
"y": 0,
"x": 1,
"config": {"channels": ["c"], "label_xy": ["", "c"], "item": "ImageItem"},
"config": {"channels": ["c"], "label_xy": ["", "c"], "item": "ImageView"},
},
]
app = QtWidgets.QApplication(sys.argv)
app = QApplication(sys.argv)
win = ConfigPlotter(CONFIG)
pg.exec()

4
bec_widgets/readme.md Normal file
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@@ -0,0 +1,4 @@
Add/modify the path in the following variable to make the plugin avaiable in Qt Designer:
```
$ export PYQTDESIGNERPATH=/<path to repo>/bec/bec_qtplugin:$PYQTDESIGNERPATH
```

106
bec_widgets/scan_plot.py Normal file
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@@ -0,0 +1,106 @@
import itertools
import pyqtgraph as pg
from PyQt5.QtCore import pyqtProperty, pyqtSlot
from bec_lib.core.logger import bec_logger
logger = bec_logger.logger
pg.setConfigOptions(background="w", foreground="k", antialias=True)
COLORS = ["#fd7f6f", "#7eb0d5", "#b2e061", "#bd7ebe", "#ffb55a"]
class BECScanPlot(pg.PlotWidget):
def __init__(self, parent=None, background="default"):
super().__init__(parent, background)
self._x_channel = ""
self._y_channel_list = []
self.scan_curves = {}
self.dap_curves = {}
def initialize(self):
plot_item = self.getPlotItem()
plot_item.addLegend()
colors = itertools.cycle(COLORS)
for y_chan in self.y_channel_list:
if y_chan.startswith("dap."):
y_chan = y_chan.partition("dap.")[-1]
curves = self.dap_curves
else:
curves = self.scan_curves
curves[y_chan] = plot_item.plot(
x=[], y=[], pen=pg.mkPen(color=next(colors), width=2), name=y_chan
)
plot_item.setLabel("bottom", self._x_channel)
if len(self.scan_curves) == 1:
plot_item.setLabel("left", next(iter(self.scan_curves)))
@pyqtSlot()
def clearData(self):
for plot_curve in {**self.scan_curves, **self.dap_curves}.values():
plot_curve.setData(x=[], y=[])
@pyqtSlot(dict)
def redraw_scan(self, data):
if not self.x_channel:
return
if self.x_channel not in data:
logger.warning(f"Unknown channel `{self.x_channel}` for X data in {self.objectName()}")
return
x_new = data[self.x_channel][self.x_channel]["value"]
for chan, plot_curve in self.scan_curves.items():
if not chan:
continue
if chan not in data:
logger.warning(f"Unknown channel `{chan}` for Y data in {self.objectName()}")
continue
y_new = data[chan][chan]["value"]
x, y = plot_curve.getData() # TODO: is it a good approach?
if x is None:
x = []
if y is None:
y = []
plot_curve.setData(x=[*x, x_new], y=[*y, y_new])
@pyqtSlot(dict)
def redraw_dap(self, data):
for chan, plot_curve in self.dap_curves.items():
if not chan:
continue
if chan not in data:
logger.warning(f"Unknown channel `{chan}` for DAP data in {self.objectName()}")
continue
x_new = data[chan]["x"]
y_new = data[chan]["y"]
plot_curve.setData(x=x_new, y=y_new)
@pyqtProperty("QStringList")
def y_channel_list(self):
return self._y_channel_list
@y_channel_list.setter
def y_channel_list(self, new_list):
self._y_channel_list = new_list
@pyqtProperty(str)
def x_channel(self):
return self._x_channel
@x_channel.setter
def x_channel(self, new_val):
self._x_channel = new_val

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@@ -0,0 +1,55 @@
from PyQt5.QtDesigner import QPyDesignerCustomWidgetPlugin
from PyQt5.QtGui import QIcon
from scan_plot import BECScanPlot
class BECScanPlotPlugin(QPyDesignerCustomWidgetPlugin):
def __init__(self, parent=None):
super(BECScanPlotPlugin, self).__init__(parent)
self._initialized = False
def initialize(self, formEditor):
if self._initialized:
return
self._initialized = True
def isInitialized(self):
return self._initialized
def createWidget(self, parent):
return BECScanPlot(parent)
def name(self):
return "BECScanPlot"
def group(self):
return "BEC widgets"
def icon(self):
return QIcon()
def toolTip(self):
return "BEC plot for scans"
def whatsThis(self):
return "BEC plot for scans"
def isContainer(self):
return False
def domXml(self):
return (
'<widget class="BECScanPlot" name="BECScanPlot">\n'
' <property name="toolTip" >\n'
" <string>BEC plot for scans</string>\n"
" </property>\n"
' <property name="whatsThis" >\n'
" <string>BEC plot for scans in Python using PyQt.</string>\n"
" </property>\n"
"</widget>\n"
)
def includeFile(self):
return "scan_plot"

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@@ -1,6 +1,6 @@
from setuptools import setup
__version__ = "0.1.0"
__version__ = "0.2.0"
if __name__ == "__main__":
setup(