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15 Commits

Author SHA1 Message Date
a275c5a3b1 wip 2026-03-15 14:31:39 +01:00
b12e6432d6 wip 2026-03-15 13:59:43 +01:00
b802beec69 wip 2026-03-15 13:53:37 +01:00
6c40df4380 wip 2026-03-15 13:36:13 +01:00
dc8ae5a85d wip 2026-03-15 13:31:45 +01:00
2d41a158bc wip 2026-03-15 13:25:42 +01:00
c2a6964875 wip 2026-03-15 13:18:15 +01:00
774ca08cb3 wip 2026-03-15 13:06:18 +01:00
4606bbd570 wip 2026-03-15 13:01:44 +01:00
b2ed9d42f7 wip 2026-03-15 12:57:19 +01:00
d799691e12 wip 2026-03-15 12:47:58 +01:00
6848a9e20b test(e2e): avoid timing issues in rpc_gui_obj test 2026-03-15 12:30:40 +01:00
semantic-release
bd5aafc052 3.2.0
Automatically generated by python-semantic-release
2026-03-11 20:52:57 +00:00
b4f6f5aa8b feat(waveform): composite DAP with multiple models 2026-03-11 21:52:10 +01:00
14d51b8016 feat(curve, waveform): add dap_parameters for lmfit customization in DAP requests 2026-03-11 21:52:10 +01:00
12 changed files with 848 additions and 449 deletions

View File

@@ -1,19 +1,19 @@
name: Full CI
on:
on:
push:
pull_request:
workflow_dispatch:
inputs:
BEC_WIDGETS_BRANCH:
description: 'Branch of BEC Widgets to install'
description: "Branch of BEC Widgets to install"
required: false
type: string
BEC_CORE_BRANCH:
description: 'Branch of BEC Core to install'
description: "Branch of BEC Core to install"
required: false
type: string
OPHYD_DEVICES_BRANCH:
description: 'Branch of Ophyd Devices to install'
description: "Branch of Ophyd Devices to install"
required: false
type: string
@@ -25,60 +25,58 @@ permissions:
pull-requests: write
jobs:
check_pr_status:
uses: ./.github/workflows/check_pr.yml
# check_pr_status:
# uses: ./.github/workflows/check_pr.yml
formatter:
needs: check_pr_status
if: needs.check_pr_status.outputs.branch-pr == ''
uses: ./.github/workflows/formatter.yml
# formatter:
# needs: check_pr_status
# if: needs.check_pr_status.outputs.branch-pr == ''
# uses: ./.github/workflows/formatter.yml
unit-test:
needs: [check_pr_status, formatter]
if: needs.check_pr_status.outputs.branch-pr == ''
uses: ./.github/workflows/pytest.yml
with:
BEC_WIDGETS_BRANCH: ${{ inputs.BEC_WIDGETS_BRANCH || github.head_ref }}
BEC_CORE_BRANCH: ${{ inputs.BEC_CORE_BRANCH || 'main' }}
OPHYD_DEVICES_BRANCH: ${{ inputs.OPHYD_DEVICES_BRANCH || 'main' }}
secrets:
CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }}
# unit-test:
# needs: [check_pr_status, formatter]
# if: needs.check_pr_status.outputs.branch-pr == ''
# uses: ./.github/workflows/pytest.yml
# with:
# BEC_WIDGETS_BRANCH: ${{ inputs.BEC_WIDGETS_BRANCH || github.head_ref }}
# BEC_CORE_BRANCH: ${{ inputs.BEC_CORE_BRANCH || 'main' }}
# OPHYD_DEVICES_BRANCH: ${{ inputs.OPHYD_DEVICES_BRANCH || 'main' }}
# secrets:
# CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }}
unit-test-matrix:
needs: [check_pr_status, formatter]
if: needs.check_pr_status.outputs.branch-pr == ''
uses: ./.github/workflows/pytest-matrix.yml
with:
BEC_WIDGETS_BRANCH: ${{ inputs.BEC_WIDGETS_BRANCH || github.head_ref || github.sha}}
BEC_CORE_BRANCH: ${{ inputs.BEC_CORE_BRANCH || 'main' }}
OPHYD_DEVICES_BRANCH: ${{ inputs.OPHYD_DEVICES_BRANCH || 'main' }}
# unit-test-matrix:
# needs: [check_pr_status, formatter]
# if: needs.check_pr_status.outputs.branch-pr == ''
# uses: ./.github/workflows/pytest-matrix.yml
# with:
# BEC_WIDGETS_BRANCH: ${{ inputs.BEC_WIDGETS_BRANCH || github.head_ref || github.sha}}
# BEC_CORE_BRANCH: ${{ inputs.BEC_CORE_BRANCH || 'main' }}
# OPHYD_DEVICES_BRANCH: ${{ inputs.OPHYD_DEVICES_BRANCH || 'main' }}
generate-cli-test:
needs: [check_pr_status, formatter]
if: needs.check_pr_status.outputs.branch-pr == ''
uses: ./.github/workflows/generate-cli-check.yml
# generate-cli-test:
# needs: [check_pr_status, formatter]
# if: needs.check_pr_status.outputs.branch-pr == ''
# uses: ./.github/workflows/generate-cli-check.yml
end2end-test:
needs: [check_pr_status, formatter]
if: needs.check_pr_status.outputs.branch-pr == ''
uses: ./.github/workflows/end2end-conda.yml
child-repos:
needs: [check_pr_status, formatter]
if: needs.check_pr_status.outputs.branch-pr == ''
uses: ./.github/workflows/child_repos.yml
with:
BEC_CORE_BRANCH: ${{ inputs.BEC_CORE_BRANCH || 'main' }}
OPHYD_DEVICES_BRANCH: ${{ inputs.OPHYD_DEVICES_BRANCH || 'main'}}
BEC_WIDGETS_BRANCH: ${{ inputs.BEC_WIDGETS_BRANCH || github.head_ref || github.sha }}
plugin_repos:
needs: [check_pr_status, formatter]
if: needs.check_pr_status.outputs.branch-pr == ''
uses: bec-project/bec/.github/workflows/plugin_repos.yml@main
with:
BEC_CORE_BRANCH: ${{ inputs.BEC_CORE_BRANCH || 'main' }}
BEC_WIDGETS_BRANCH: ${{ inputs.BEC_WIDGETS_BRANCH || github.head_ref || github.sha }}
# child-repos:
# needs: [check_pr_status, formatter]
# if: needs.check_pr_status.outputs.branch-pr == ''
# uses: ./.github/workflows/child_repos.yml
# with:
# BEC_CORE_BRANCH: ${{ inputs.BEC_CORE_BRANCH || 'main' }}
# OPHYD_DEVICES_BRANCH: ${{ inputs.OPHYD_DEVICES_BRANCH || 'main'}}
# BEC_WIDGETS_BRANCH: ${{ inputs.BEC_WIDGETS_BRANCH || github.head_ref || github.sha }}
secrets:
GH_READ_TOKEN: ${{ secrets.GH_READ_TOKEN }}
# plugin_repos:
# needs: [check_pr_status, formatter]
# if: needs.check_pr_status.outputs.branch-pr == ''
# uses: bec-project/bec/.github/workflows/plugin_repos.yml@main
# with:
# BEC_CORE_BRANCH: ${{ inputs.BEC_CORE_BRANCH || 'main' }}
# BEC_WIDGETS_BRANCH: ${{ inputs.BEC_WIDGETS_BRANCH || github.head_ref || github.sha }}
# secrets:
# GH_READ_TOKEN: ${{ secrets.GH_READ_TOKEN }}

View File

@@ -48,12 +48,14 @@ jobs:
source ./bin/install_bec_dev.sh -t
cd ../
pip install -e ./ophyd_devices -e .[dev,pyside6] -e ./bec_testing_plugin
pytest -v --files-path ./ --start-servers --random-order ./tests/end-2-end
pip install pytest-repeat
pytest -v --files-path ./ --start-servers --random-order ./tests/end-2-end/user_interaction/test_user_interaction_e2e.py
- name: Upload logs if job fails
if: failure()
uses: actions/upload-artifact@v4
with:
name: pytest-logs
path: ./logs/*.log
path: ./bec/logs/*.log
retention-days: 7

View File

@@ -1,6 +1,17 @@
# CHANGELOG
## v3.2.0 (2026-03-11)
### Features
- **curve, waveform**: Add dap_parameters for lmfit customization in DAP requests
([`14d51b8`](https://github.com/bec-project/bec_widgets/commit/14d51b80169f5a060dd24287f3a6db9a4b41275a))
- **waveform**: Composite DAP with multiple models
([`b4f6f5a`](https://github.com/bec-project/bec_widgets/commit/b4f6f5aa8bcd0f6091610e8f839ea265c87575e0))
## v3.1.4 (2026-03-11)
### Bug Fixes

View File

@@ -6249,7 +6249,8 @@ class Waveform(RPCBase):
signal_y: "str | None" = None,
color: "str | None" = None,
label: "str | None" = None,
dap: "str | None" = None,
dap: "str | list[str] | None" = None,
dap_parameters: "dict | list | lmfit.Parameters | None | object" = None,
scan_id: "str | None" = None,
scan_number: "int | None" = None,
**kwargs,
@@ -6271,9 +6272,14 @@ class Waveform(RPCBase):
signal_y(str): The name of the entry for the y-axis.
color(str): The color of the curve.
label(str): The label of the curve.
dap(str): The dap model to use for the curve. When provided, a DAP curve is
dap(str | list[str]): The dap model to use for the curve. When provided, a DAP curve is
attached automatically for device, history, or custom data sources. Use
the same string as the LMFit model name.
the same string as the LMFit model name, or a list of model names to build a composite.
dap_parameters(dict | list | lmfit.Parameters | None): Optional lmfit parameter overrides sent to
the DAP server. For a single model: values can be numeric (interpreted as fixed parameters)
or dicts like `{"value": 1.0, "vary": False}`. For composite models (dap is list), use either
a list aligned to the model list (each item is a param dict), or a dict of
`{ "ModelName": { "param": {...} } }` when model names are unique.
scan_id(str): Optional scan ID. When provided, the curve is treated as a **history** curve and
the ydata (and optional xdata) are fetched from that historical scan. Such curves are
never cleared by livescan resets.
@@ -6287,9 +6293,10 @@ class Waveform(RPCBase):
def add_dap_curve(
self,
device_label: "str",
dap_name: "str",
dap_name: "str | list[str]",
color: "str | None" = None,
dap_oversample: "int" = 1,
dap_parameters: "dict | list | lmfit.Parameters | None" = None,
**kwargs,
) -> "Curve":
"""
@@ -6299,9 +6306,11 @@ class Waveform(RPCBase):
Args:
device_label(str): The label of the source curve to add DAP to.
dap_name(str): The name of the DAP model to use.
dap_name(str | list[str]): The name of the DAP model to use, or a list of model
names to build a composite model.
color(str): The color of the curve.
dap_oversample(int): The oversampling factor for the DAP curve.
dap_parameters(dict | list | lmfit.Parameters | None): Optional lmfit parameter overrides sent to the DAP server.
**kwargs
Returns:

View File

@@ -118,6 +118,9 @@ class RPCServer:
logger.debug(f"Received RPC instruction: {msg}, metadata: {metadata}")
with rpc_exception_hook(functools.partial(self.send_response, request_id, False)):
try:
logger.info(
f"Processing RPC instruction: {msg['action']} with request_id: {request_id}. Parameters: {msg.get('parameter')}"
)
method = msg["action"]
args = msg["parameter"].get("args", [])
kwargs = msg["parameter"].get("kwargs", {})
@@ -257,6 +260,10 @@ class RPCServer:
else:
name = WidgetContainerUtils.generate_unique_name("dock_area", existing_dock_areas)
logger.info(
f"Launching new dock area with name: {name} and startup_profile: {startup_profile}"
)
result_widget = bw_launch.dock_area(object_name=name, startup_profile=startup_profile)
result_widget.window().setWindowTitle(f"BEC - {name}")
@@ -296,6 +303,9 @@ class RPCServer:
else:
res = self.serialize_object(res)
except RegistryNotReadyError:
logger.info(
f"Object not registered yet for RPC request {request_id}, retrying serialization after {retry_delay} ms"
)
try:
self._rpc_singleshot_repeats[request_id] += retry_delay
QTimer.singleShot(

View File

@@ -22,8 +22,9 @@ class DeviceSignal(BaseModel):
device: str
signal: str
dap: str | None = None
dap: str | list[str] | None = None
dap_oversample: int = 1
dap_parameters: dict | list | None = None
model_config: dict = {"validate_assignment": True}

View File

@@ -1,13 +1,13 @@
from __future__ import annotations
import json
from typing import Literal
from typing import TYPE_CHECKING, Literal
import lmfit
import numpy as np
import pyqtgraph as pg
from bec_lib import bec_logger, messages
from bec_lib.endpoints import MessageEndpoints
from bec_lib.lmfit_serializer import serialize_lmfit_params, serialize_param_object
from bec_lib.scan_data_container import ScanDataContainer
from pydantic import Field, ValidationError, field_validator
from qtpy.QtCore import Qt, QTimer, Signal
@@ -41,6 +41,18 @@ from bec_widgets.widgets.services.scan_history_browser.scan_history_browser impo
)
logger = bec_logger.logger
_DAP_PARAM = object()
if TYPE_CHECKING: # pragma: no cover
import lmfit # type: ignore
else:
try:
import lmfit # type: ignore
except Exception as e: # pragma: no cover
logger.warning(
f"lmfit could not be imported: {e}. Custom DAP functionality will be unavailable."
)
lmfit = None
# noinspection PyDataclass
@@ -696,7 +708,8 @@ class Waveform(PlotBase):
signal_y: str | None = None,
color: str | None = None,
label: str | None = None,
dap: str | None = None,
dap: str | list[str] | None = None,
dap_parameters: dict | list | lmfit.Parameters | None | object = None,
scan_id: str | None = None,
scan_number: int | None = None,
**kwargs,
@@ -718,9 +731,14 @@ class Waveform(PlotBase):
signal_y(str): The name of the entry for the y-axis.
color(str): The color of the curve.
label(str): The label of the curve.
dap(str): The dap model to use for the curve. When provided, a DAP curve is
dap(str | list[str]): The dap model to use for the curve. When provided, a DAP curve is
attached automatically for device, history, or custom data sources. Use
the same string as the LMFit model name.
the same string as the LMFit model name, or a list of model names to build a composite.
dap_parameters(dict | list | lmfit.Parameters | None): Optional lmfit parameter overrides sent to
the DAP server. For a single model: values can be numeric (interpreted as fixed parameters)
or dicts like `{"value": 1.0, "vary": False}`. For composite models (dap is list), use either
a list aligned to the model list (each item is a param dict), or a dict of
`{ "ModelName": { "param": {...} } }` when model names are unique.
scan_id(str): Optional scan ID. When provided, the curve is treated as a **history** curve and
the ydata (and optional xdata) are fetched from that historical scan. Such curves are
never cleared by livescan resets.
@@ -733,6 +751,8 @@ class Waveform(PlotBase):
source = "custom"
x_data = None
y_data = None
if dap_parameters is _DAP_PARAM:
dap_parameters = kwargs.pop("dap_parameters", None) or kwargs.pop("parameters", None)
# 1. Custom curve logic
if x is not None and y is not None:
@@ -810,7 +830,9 @@ class Waveform(PlotBase):
curve = self._add_curve(config=config, x_data=x_data, y_data=y_data)
if dap is not None and curve.config.source in ("device", "history", "custom"):
self.add_dap_curve(device_label=curve.name(), dap_name=dap, **kwargs)
self.add_dap_curve(
device_label=curve.name(), dap_name=dap, dap_parameters=dap_parameters, **kwargs
)
return curve
@@ -820,9 +842,10 @@ class Waveform(PlotBase):
def add_dap_curve(
self,
device_label: str,
dap_name: str,
dap_name: str | list[str],
color: str | None = None,
dap_oversample: int = 1,
dap_parameters: dict | list | lmfit.Parameters | None = None,
**kwargs,
) -> Curve:
"""
@@ -832,9 +855,11 @@ class Waveform(PlotBase):
Args:
device_label(str): The label of the source curve to add DAP to.
dap_name(str): The name of the DAP model to use.
dap_name(str | list[str]): The name of the DAP model to use, or a list of model
names to build a composite model.
color(str): The color of the curve.
dap_oversample(int): The oversampling factor for the DAP curve.
dap_parameters(dict | list | lmfit.Parameters | None): Optional lmfit parameter overrides sent to the DAP server.
**kwargs
Returns:
@@ -859,7 +884,7 @@ class Waveform(PlotBase):
dev_entry = "custom"
# 2) Build a label for the new DAP curve
dap_label = f"{device_label}-{dap_name}"
dap_label = f"{device_label}-{self._format_dap_label(dap_name)}"
# 3) Possibly raise if the DAP curve already exists
if self._check_curve_id(dap_label):
@@ -882,7 +907,11 @@ class Waveform(PlotBase):
# Attach device signal with DAP
config.signal = DeviceSignal(
device=dev_name, signal=dev_entry, dap=dap_name, dap_oversample=dap_oversample
device=dev_name,
signal=dev_entry,
dap=dap_name,
dap_oversample=dap_oversample,
dap_parameters=self._normalize_dap_parameters(dap_parameters, dap_name=dap_name),
)
# 4) Create the DAP curve config using `_add_curve(...)`
@@ -1754,7 +1783,9 @@ class Waveform(PlotBase):
x_data, y_data = parent_curve.get_data()
model_name = dap_curve.config.signal.dap
model = getattr(self.dap, model_name)
model = None
if not isinstance(model_name, (list, tuple)):
model = getattr(self.dap, model_name)
try:
x_min, x_max = self.roi_region
x_data, y_data = self._crop_data(x_data, y_data, x_min, x_max)
@@ -1762,20 +1793,132 @@ class Waveform(PlotBase):
x_min = None
x_max = None
dap_parameters = getattr(dap_curve.config.signal, "dap_parameters", None)
dap_kwargs = {
"data_x": x_data,
"data_y": y_data,
"oversample": dap_curve.dap_oversample,
}
if dap_parameters:
dap_kwargs["parameters"] = dap_parameters
if model is not None:
class_args = model._plugin_info["class_args"]
class_kwargs = model._plugin_info["class_kwargs"]
else:
class_args = []
class_kwargs = {"model": model_name}
msg = messages.DAPRequestMessage(
dap_cls="LmfitService1D",
dap_type="on_demand",
config={
"args": [],
"kwargs": {"data_x": x_data, "data_y": y_data},
"class_args": model._plugin_info["class_args"],
"class_kwargs": model._plugin_info["class_kwargs"],
"kwargs": dap_kwargs,
"class_args": class_args,
"class_kwargs": class_kwargs,
"curve_label": dap_curve.name(),
},
metadata={"RID": f"{self.scan_id}-{self.gui_id}"},
)
self.client.connector.set_and_publish(MessageEndpoints.dap_request(), msg)
@staticmethod
def _normalize_dap_parameters(
parameters: dict | list | lmfit.Parameters | None, dap_name: str | list[str] | None = None
) -> dict | list | None:
"""
Normalize user-provided lmfit parameters into a JSON-serializable dict suitable for the DAP server.
Supports:
- `lmfit.Parameters` (single-model only)
- `dict[name -> number]` (treated as fixed parameter with `vary=False`)
- `dict[name -> dict]` (lmfit.Parameter fields; defaults to `vary=False` if unspecified)
- `dict[name -> lmfit.Parameter]`
- composite: `list[dict[param_name -> spec]]` aligned to model list
- composite: `dict[model_name -> dict[param_name -> spec]]` (unique model names only)
"""
if parameters is None:
return None
if isinstance(dap_name, (list, tuple)):
if lmfit is not None and isinstance(parameters, lmfit.Parameters):
raise TypeError("dap_parameters must be a dict when using composite dap models.")
if isinstance(parameters, (list, tuple)):
normalized_list: list[dict | None] = []
for idx, item in enumerate(parameters):
if item is None:
normalized_list.append(None)
continue
if not isinstance(item, dict):
raise TypeError(
f"dap_parameters list item {idx} must be a dict of parameter overrides."
)
normalized_list.append(Waveform._normalize_param_overrides(item))
return normalized_list or None
if not isinstance(parameters, dict):
raise TypeError(
"dap_parameters must be a dict of model->params when using composite dap models."
)
model_names = set(dap_name)
invalid_models = set(parameters.keys()) - model_names
if invalid_models:
raise TypeError(
f"Invalid dap_parameters keys for composite model: {sorted(invalid_models)}"
)
normalized_composite: dict[str, dict] = {}
for model_name in dap_name:
model_params = parameters.get(model_name)
if model_params is None:
continue
if not isinstance(model_params, dict):
raise TypeError(
f"dap_parameters for '{model_name}' must be a dict of parameter overrides."
)
normalized = Waveform._normalize_param_overrides(model_params)
if normalized:
normalized_composite[model_name] = normalized
return normalized_composite or None
if lmfit is not None and isinstance(parameters, lmfit.Parameters):
return serialize_lmfit_params(parameters)
if not isinstance(parameters, dict):
if lmfit is None:
raise TypeError(
"dap_parameters must be a dict when lmfit is not installed on the client."
)
raise TypeError("dap_parameters must be a dict or lmfit.Parameters (or omitted).")
return Waveform._normalize_param_overrides(parameters)
@staticmethod
def _normalize_param_overrides(parameters: dict) -> dict | None:
normalized: dict[str, dict] = {}
for name, spec in parameters.items():
if spec is None:
continue
if isinstance(spec, (int, float, np.number)):
normalized[name] = {"name": name, "value": float(spec), "vary": False}
continue
if lmfit is not None and isinstance(spec, lmfit.Parameter):
normalized[name] = serialize_param_object(spec)
continue
if isinstance(spec, dict):
normalized[name] = {"name": name, **spec}
if "vary" not in normalized[name]:
normalized[name]["vary"] = False
continue
raise TypeError(
f"Invalid dap_parameters entry for '{name}': expected number, dict, or lmfit.Parameter."
)
return normalized or None
@staticmethod
def _format_dap_label(dap_name: str | list[str]) -> str:
if isinstance(dap_name, (list, tuple)):
return "+".join(dap_name)
return dap_name
@SafeSlot(dict, dict)
def update_dap_curves(self, msg, metadata):
"""
@@ -1793,14 +1936,6 @@ class Waveform(PlotBase):
if not curve:
return
# Get data from the parent (device) curve
parent_curve = self._find_curve_by_label(curve.config.parent_label)
if parent_curve is None:
return
x_parent, _ = parent_curve.get_data()
if x_parent is None or len(x_parent) == 0:
return
# Retrieve and store the fit parameters and summary from the DAP server response
try:
curve.dap_params = msg["data"][1]["fit_parameters"]
@@ -1809,19 +1944,13 @@ class Waveform(PlotBase):
logger.warning(f"Failed to retrieve DAP data for curve '{curve.name()}'")
return
# Render model according to the DAP model name and parameters
model_name = curve.config.signal.dap
model_function = getattr(lmfit.models, model_name)()
x_min, x_max = x_parent.min(), x_parent.max()
oversample = curve.dap_oversample
new_x = np.linspace(x_min, x_max, int(len(x_parent) * oversample))
# Evaluate the model with the provided parameters to generate the y values
new_y = model_function.eval(**curve.dap_params, x=new_x)
# Update the curve with the new data
curve.setData(new_x, new_y)
# Plot the fitted curve using the server-provided output to avoid requiring lmfit on the client.
try:
fit_data = msg["data"][0]
curve.setData(np.asarray(fit_data["x"]), np.asarray(fit_data["y"]))
except Exception as e:
logger.exception(f"Failed to plot DAP result for curve '{curve.name()}', error: {e}")
return
metadata.update({"curve_id": curve_id})
self.dap_params_update.emit(curve.dap_params, metadata)
@@ -2341,24 +2470,20 @@ class DemoApp(QMainWindow): # pragma: no cover
def __init__(self):
super().__init__()
self.setWindowTitle("Waveform Demo")
self.resize(1200, 600)
self.resize(1600, 600)
self.main_widget = QWidget(self)
self.layout = QHBoxLayout(self.main_widget)
self.setCentralWidget(self.main_widget)
self.waveform_popup = Waveform(popups=True)
self.waveform_popup.plot(device_y="waveform")
self.waveform_side = Waveform(popups=False)
self.waveform_side.plot(device_y="bpm4i", signal_y="bpm4i", dap="GaussianModel")
self.waveform_side.plot(device_y="bpm3a", signal_y="bpm3a")
self.custom_waveform = Waveform(popups=True)
self._populate_custom_curve_demo()
self.layout.addWidget(self.waveform_side)
self.layout.addWidget(self.waveform_popup)
self.sine_waveform = Waveform(popups=True)
self.sine_waveform.dap_params_update.connect(self._log_sine_dap_params)
self._populate_sine_curve_demo()
self.layout.addWidget(self.custom_waveform)
self.layout.addWidget(self.sine_waveform)
def _populate_custom_curve_demo(self):
"""
@@ -2377,8 +2502,141 @@ class DemoApp(QMainWindow): # pragma: no cover
sigma = 0.8
y = amplitude * np.exp(-((x - center) ** 2) / (2 * sigma**2)) + noise
# 1) No explicit parameters: server will use lmfit defaults/guesses.
self.custom_waveform.plot(x=x, y=y, label="custom-gaussian", dap="GaussianModel")
# 2) Easy dict: numbers mean "fix this parameter to value" (vary=False).
self.custom_waveform.plot(
x=x,
y=y,
label="custom-gaussian-fixed-easy",
dap="GaussianModel",
dap_parameters={"amplitude": 1.0},
dap_oversample=5,
)
# 3) Partial parameter override: this should still trigger guessing on the server
# because not all Gaussian parameters are explicitly specified.
self.custom_waveform.plot(
x=x,
y=y,
label="custom-gaussian-partial-guess",
dap="GaussianModel",
dap_parameters={
"center": {"value": 1.2, "vary": True},
"sigma": {"value": sigma, "vary": False, "min": 0.0},
},
)
# 4) Complete parameter override: this should skip guessing on the server.
if lmfit is not None:
params_gauss = lmfit.models.GaussianModel().make_params()
params_gauss["amplitude"].set(value=amplitude, vary=False)
params_gauss["center"].set(value=center, vary=False)
params_gauss["sigma"].set(value=sigma, vary=False, min=0.0)
self.custom_waveform.plot(
x=x,
y=y,
label="custom-gaussian-complete-no-guess",
dap="GaussianModel",
dap_parameters=params_gauss,
)
else:
logger.info("Skipping lmfit.Parameters demo (lmfit not installed on client).")
# Composite example: spectrum with three Gaussians (DAP-only)
x_spec = np.linspace(-5, 5, 800)
rng_spec = np.random.default_rng(123)
centers = [-2.0, 0.6, 2.4]
amplitudes = [2.5, 3.2, 1.8]
sigmas = [0.35, 0.5, 0.3]
y_spec = (
amplitudes[0] * np.exp(-((x_spec - centers[0]) ** 2) / (2 * sigmas[0] ** 2))
+ amplitudes[1] * np.exp(-((x_spec - centers[1]) ** 2) / (2 * sigmas[1] ** 2))
+ amplitudes[2] * np.exp(-((x_spec - centers[2]) ** 2) / (2 * sigmas[2] ** 2))
+ rng_spec.normal(loc=0, scale=0.06, size=x_spec.size)
)
# 5) Composite model with partial overrides only: this should still trigger guessing.
self.custom_waveform.plot(
x=x_spec,
y=y_spec,
label="custom-gaussian-spectrum-partial-guess",
dap=["GaussianModel", "GaussianModel", "GaussianModel"],
dap_parameters=[
{"center": {"value": centers[0], "vary": False}},
{"center": {"value": centers[1], "vary": False}},
{"center": {"value": centers[2], "vary": False}},
],
)
# 6) Composite model with all component parameters specified: this should skip guessing.
self.custom_waveform.plot(
x=x_spec,
y=y_spec,
label="custom-gaussian-spectrum-complete-no-guess",
dap=["GaussianModel", "GaussianModel", "GaussianModel"],
dap_parameters=[
{
"amplitude": {"value": amplitudes[0], "vary": False},
"center": {"value": centers[0], "vary": False},
"sigma": {"value": sigmas[0], "vary": False, "min": 0.0},
},
{
"amplitude": {"value": amplitudes[1], "vary": False},
"center": {"value": centers[1], "vary": False},
"sigma": {"value": sigmas[1], "vary": False, "min": 0.0},
},
{
"amplitude": {"value": amplitudes[2], "vary": False},
"center": {"value": centers[2], "vary": False},
"sigma": {"value": sigmas[2], "vary": False, "min": 0.0},
},
],
)
def _populate_sine_curve_demo(self):
"""
Showcase how lmfit's base SineModel can struggle with a drifting baseline.
"""
x = np.linspace(0, 6 * np.pi, 600)
rng = np.random.default_rng(7)
amplitude = 1.6
frequency = 0.75
phase = 0.4
offset = 0.8
slope = 0.08
noise = rng.normal(loc=0, scale=0.12, size=x.size)
y = offset + slope * x + amplitude * np.sin(2 * np.pi * frequency * x + phase) + noise
# Base SineModel (no offset support) to show the mismatch
self.sine_waveform.plot(x=x, y=y, label="custom-sine-data", dap="SineModel")
# Composite model: Sine + Linear baseline (offset + slope)
self.sine_waveform.plot(
x=x,
y=y,
label="custom-sine-composite",
dap=["SineModel", "LinearModel"],
dap_oversample=4,
)
if lmfit is None:
logger.info("Skipping sine lmfit demo (lmfit not installed on client).")
return
return
@staticmethod
def _log_sine_dap_params(params: dict, metadata: dict):
curve_id = metadata.get("curve_id")
if curve_id not in {
"custom-sine-data-SineModel",
"custom-sine-composite-SineModel+LinearModel",
}:
return
logger.info(f"SineModel DAP fit params ({curve_id}): {params}")
if __name__ == "__main__": # pragma: no cover
import sys

View File

@@ -4,7 +4,7 @@ build-backend = "hatchling.build"
[project]
name = "bec_widgets"
version = "3.1.4"
version = "3.2.0"
description = "BEC Widgets"
requires-python = ">=3.11"
classifiers = [

View File

@@ -150,7 +150,9 @@ def test_rpc_gui_obj(connected_client_gui_obj, qtbot):
# communication should work, main dock area should have same id and be visible
yw = gui.new("Y")
qtbot.waitUntil(lambda: len(gui.windows) == 2, timeout=3000)
yw.delete_all()
assert len(gui.windows) == 2
yw.remove()
assert len(gui.windows) == 1 # only bec is left
qtbot.waitUntil(lambda: len(gui.windows) == 1, timeout=3000)
assert len(gui.windows) == 1

View File

@@ -72,6 +72,7 @@ def test_rpc_plotting_shortcuts_init_configs(qtbot, connected_client_gui_obj):
"dap": None,
"device": "bpm4i",
"signal": "bpm4i",
"dap_parameters": None,
"dap_oversample": 1,
}
assert c1._config_dict["source"] == "device"

View File

@@ -135,144 +135,160 @@ def maybe_remove_dock_area(qtbot, gui: BECGuiClient, random_int_gen: random.Rand
wait_for_namespace_change(
qtbot, gui=gui, parent_widget=gui, object_name=name, widget_gui_id=gui_id, exists=False
)
qtbot.waitUntil(lambda: hasattr(gui, "dock_area") is False, timeout=5000)
@pytest.mark.timeout(PYTEST_TIMEOUT)
def test_widgets_e2e_bec_progress_bar(qtbot, connected_client_gui_obj, random_generator_from_seed):
"""Test the BECProgressBar widget."""
gui = connected_client_gui_obj
bec = gui._client
# Create dock_area and widget
widget = create_widget(qtbot, gui, gui.available_widgets.BECProgressBar)
widget: client.BECProgressBar
# Check rpc calls
assert widget.label_template == "$value / $maximum - $percentage %"
widget.set_maximum(100)
widget.set_minimum(50)
widget.set_value(75)
assert widget._get_label() == "75 / 100 - 50 %"
# Test removing the widget, or leaving it open for the next test
maybe_remove_dock_area(qtbot, gui=gui, random_int_gen=random_generator_from_seed)
@pytest.mark.timeout(PYTEST_TIMEOUT)
def test_widgets_e2e_bec_queue(qtbot, connected_client_gui_obj, random_generator_from_seed):
"""Test the BECQueue widget."""
gui = connected_client_gui_obj
bec = gui._client
# Create dock_area and widget
widget = create_widget(qtbot, gui, gui.available_widgets.BECQueue)
widget: client.BECQueue
# No rpc calls to test so far
# maybe we can add an rpc call to check the queue length
# Test removing the widget, or leaving it open for the next test
maybe_remove_dock_area(qtbot, gui=gui, random_int_gen=random_generator_from_seed)
@pytest.mark.timeout(PYTEST_TIMEOUT)
def test_widgets_e2e_bec_status_box(qtbot, connected_client_gui_obj, random_generator_from_seed):
"""Test the BECStatusBox widget."""
gui = connected_client_gui_obj
bec = gui._client
# Create dock_area and widget
widget = create_widget(qtbot, gui, gui.available_widgets.BECStatusBox)
# Check rpc calls
assert widget.get_server_state() in ["RUNNING", "IDLE", "BUSY", "ERROR"]
# Test removing the widget, or leaving it open for the next test
maybe_remove_dock_area(qtbot, gui=gui, random_int_gen=random_generator_from_seed)
@pytest.mark.timeout(PYTEST_TIMEOUT)
def test_widgets_e2e_dap_combo_box(qtbot, connected_client_gui_obj, random_generator_from_seed):
"""Test the DAPComboBox widget."""
gui = connected_client_gui_obj
bec = gui._client
# Create dock_area and widget
widget = create_widget(qtbot, gui, gui.available_widgets.DapComboBox)
widget: client.DAPComboBox
# Check rpc calls
widget.select_fit_model("PseudoVoigtModel")
widget.select_x_axis("samx")
widget.select_y_axis("bpm4i")
# Test removing the widget, or leaving it open for the next test
maybe_remove_dock_area(qtbot, gui=gui, random_int_gen=random_generator_from_seed)
@pytest.mark.timeout(PYTEST_TIMEOUT)
def test_widgets_e2e_device_browser(qtbot, connected_client_gui_obj, random_generator_from_seed):
"""Test the DeviceBrowser widget."""
gui = connected_client_gui_obj
bec = gui._client
# Create dock_area and widget
widget = create_widget(qtbot, gui, gui.available_widgets.DeviceBrowser)
widget: client.DeviceBrowser
# No rpc calls yet to check
# Test removing the widget, or leaving it open for the next test
maybe_remove_dock_area(qtbot, gui=gui, random_int_gen=random_generator_from_seed)
@pytest.mark.timeout(PYTEST_TIMEOUT)
def test_widgets_e2e_image(qtbot, connected_client_gui_obj, random_generator_from_seed):
"""Test the Image widget."""
gui = connected_client_gui_obj
bec = gui._client
# Create dock_area and widget
widget = create_widget(qtbot, gui, gui.available_widgets.Image)
widget: client.Image
scans = bec.scans
dev = bec.device_manager.devices
# Test rpc calls
img = widget.image(device=dev.eiger.name, signal="preview")
assert img.get_data() is None
# Run a scan and plot the image
s = scans.line_scan(dev.samx, -3, 3, steps=50, exp_time=0.01, relative=False)
s.wait()
def _wait_for_scan_in_history():
# Get scan item from history
scan_item = bec.history.get_by_scan_id(s.scan.scan_id)
return scan_item is not None
qtbot.waitUntil(_wait_for_scan_in_history, timeout=7000)
# Check that last image is equivalent to data in Redis
last_img = bec.connector.get_last(MessageEndpoints.device_preview("eiger", "preview"))[
"data"
].data
assert np.allclose(img.get_data(), last_img)
# Now add a device with a preview signal
img = widget.image(device="eiger", signal="preview")
s = scans.line_scan(dev.samx, -3, 3, steps=50, exp_time=0.01, relative=False)
s.wait()
qtbot.waitUntil(_wait_for_scan_in_history, timeout=7000)
# Test removing the widget, or leaving it open for the next test
maybe_remove_dock_area(qtbot, gui=gui, random_int_gen=random_generator_from_seed)
# TODO re-enable when issue is resolved #560
# @pytest.mark.timeout(PYTEST_TIMEOUT)
# def test_widgets_e2e_log_panel(qtbot, connected_client_gui_obj, random_generator_from_seed):
# """Test the LogPanel widget."""
# def test_widgets_e2e_bec_progress_bar(qtbot, connected_client_gui_obj, random_generator_from_seed):
# """Test the BECProgressBar widget."""
# gui = connected_client_gui_obj
# bec = gui._client
# # Create dock_area and widget
# widget = create_widget(qtbot, gui, gui.available_widgets.LogPanel)
# widget: client.LogPanel
# widget = create_widget(qtbot, gui, gui.available_widgets.BECProgressBar)
# widget: client.BECProgressBar
# # Check rpc calls
# assert widget.label_template == "$value / $maximum - $percentage %"
# widget.set_maximum(100)
# widget.set_minimum(50)
# widget.set_value(75)
# assert widget._get_label() == "75 / 100 - 50 %"
# # Test removing the widget, or leaving it open for the next test
# maybe_remove_dock_area(qtbot, gui=gui, random_int_gen=random_generator_from_seed)
# @pytest.mark.timeout(PYTEST_TIMEOUT)
# def test_widgets_e2e_bec_queue(qtbot, connected_client_gui_obj, random_generator_from_seed):
# """Test the BECQueue widget."""
# gui = connected_client_gui_obj
# bec = gui._client
# # Create dock_area and widget
# widget = create_widget(qtbot, gui, gui.available_widgets.BECQueue)
# widget: client.BECQueue
# # No rpc calls to test so far
# # maybe we can add an rpc call to check the queue length
# # Test removing the widget, or leaving it open for the next test
# maybe_remove_dock_area(qtbot, gui=gui, random_int_gen=random_generator_from_seed)
# @pytest.mark.timeout(PYTEST_TIMEOUT)
# def test_widgets_e2e_bec_status_box(qtbot, connected_client_gui_obj, random_generator_from_seed):
# """Test the BECStatusBox widget."""
# gui = connected_client_gui_obj
# bec = gui._client
# # Create dock_area and widget
# widget = create_widget(qtbot, gui, gui.available_widgets.BECStatusBox)
# # Check rpc calls
# assert widget.get_server_state() in ["RUNNING", "IDLE", "BUSY", "ERROR"]
# # Test removing the widget, or leaving it open for the next test
# maybe_remove_dock_area(qtbot, gui=gui, random_int_gen=random_generator_from_seed)
# @pytest.mark.timeout(PYTEST_TIMEOUT)
# def test_widgets_e2e_dap_combo_box(qtbot, connected_client_gui_obj, random_generator_from_seed):
# """Test the DAPComboBox widget."""
# gui = connected_client_gui_obj
# bec = gui._client
# # Create dock_area and widget
# widget = create_widget(qtbot, gui, gui.available_widgets.DapComboBox)
# widget: client.DAPComboBox
# # Check rpc calls
# widget.select_fit_model("PseudoVoigtModel")
# widget.select_x_axis("samx")
# widget.select_y_axis("bpm4i")
# # Test removing the widget, or leaving it open for the next test
# maybe_remove_dock_area(qtbot, gui=gui, random_int_gen=random_generator_from_seed)
# @pytest.mark.timeout(PYTEST_TIMEOUT)
# def test_widgets_e2e_device_browser(qtbot, connected_client_gui_obj, random_generator_from_seed):
# """Test the DeviceBrowser widget."""
# gui = connected_client_gui_obj
# bec = gui._client
# # Create dock_area and widget
# widget = create_widget(qtbot, gui, gui.available_widgets.DeviceBrowser)
# widget: client.DeviceBrowser
# # No rpc calls yet to check
# # Test removing the widget, or leaving it open for the next test
# maybe_remove_dock_area(qtbot, gui=gui, random_int_gen=random_generator_from_seed)
# @pytest.mark.timeout(PYTEST_TIMEOUT)
# def test_widgets_e2e_image(qtbot, connected_client_gui_obj, random_generator_from_seed):
# """Test the Image widget."""
# gui = connected_client_gui_obj
# bec = gui._client
# # Create dock_area and widget
# widget = create_widget(qtbot, gui, gui.available_widgets.Image)
# widget: client.Image
# scans = bec.scans
# dev = bec.device_manager.devices
# # Test rpc calls
# img = widget.image(device=dev.eiger.name, signal="preview")
# assert img.get_data() is None
# # Run a scan and plot the image
# s = scans.line_scan(dev.samx, -3, 3, steps=50, exp_time=0.01, relative=False)
# s.wait()
# def _wait_for_scan_in_history():
# # Get scan item from history
# scan_item = bec.history.get_by_scan_id(s.scan.scan_id)
# return scan_item is not None
# qtbot.waitUntil(_wait_for_scan_in_history, timeout=7000)
# # Check that last image is equivalent to data in Redis
# last_img = bec.connector.get_last(MessageEndpoints.device_preview("eiger", "preview"))[
# "data"
# ].data
# assert np.allclose(img.get_data(), last_img)
# # Now add a device with a preview signal
# img = widget.image(device="eiger", signal="preview")
# s = scans.line_scan(dev.samx, -3, 3, steps=50, exp_time=0.01, relative=False)
# s.wait()
# qtbot.waitUntil(_wait_for_scan_in_history, timeout=7000)
# # Test removing the widget, or leaving it open for the next test
# maybe_remove_dock_area(qtbot, gui=gui, random_int_gen=random_generator_from_seed)
# # TODO re-enable when issue is resolved #560
# # @pytest.mark.timeout(PYTEST_TIMEOUT)
# # def test_widgets_e2e_log_panel(qtbot, connected_client_gui_obj, random_generator_from_seed):
# # """Test the LogPanel widget."""
# # gui = connected_client_gui_obj
# # bec = gui._client
# # # Create dock_area and widget
# # widget = create_widget(qtbot, gui, gui.available_widgets.LogPanel)
# # widget: client.LogPanel
# # # No rpc calls to check so far
# # # Test removing the widget, or leaving it open for the next test
# # maybe_remove_dock_area(qtbot, gui=gui, random_int_gen=random_generator_from_seed)
# @pytest.mark.timeout(PYTEST_TIMEOUT)
# def test_widgets_e2e_minesweeper(qtbot, connected_client_gui_obj, random_generator_from_seed):
# """Test the MineSweeper widget."""
# gui = connected_client_gui_obj
# bec = gui._client
# # Create dock_area and widget
# widget = create_widget(qtbot, gui, gui.available_widgets.Minesweeper)
# widget: client.MineSweeper
# # No rpc calls to check so far
@@ -280,175 +296,160 @@ def test_widgets_e2e_image(qtbot, connected_client_gui_obj, random_generator_fro
# maybe_remove_dock_area(qtbot, gui=gui, random_int_gen=random_generator_from_seed)
@pytest.mark.timeout(PYTEST_TIMEOUT)
def test_widgets_e2e_minesweeper(qtbot, connected_client_gui_obj, random_generator_from_seed):
"""Test the MineSweeper widget."""
gui = connected_client_gui_obj
bec = gui._client
# Create dock_area and widget
widget = create_widget(qtbot, gui, gui.available_widgets.Minesweeper)
widget: client.MineSweeper
# @pytest.mark.timeout(PYTEST_TIMEOUT)
# def test_widgets_e2e_motor_map(qtbot, connected_client_gui_obj, random_generator_from_seed):
# """Test the MotorMap widget."""
# gui = connected_client_gui_obj
# bec = gui._client
# # Create dock_area and widget
# widget = create_widget(qtbot, gui, gui.available_widgets.MotorMap)
# widget: client.MotorMap
# No rpc calls to check so far
# # Test RPC calls
# dev = bec.device_manager.devices
# scans = bec.scans
# # Set motor map to names
# widget.map(dev.samx, dev.samy)
# # Move motor samx to pos
# pos = dev.samx.limits[1] - 1 # -1 from higher limit
# scans.mv(dev.samx, pos, relative=False).wait()
# # Check that data is up to date
# assert np.isclose(widget.get_data()["x"][-1], pos, dev.samx.precision)
# # Move motor samy to pos
# pos = dev.samy.limits[0] + 1 # +1 from lower limit
# scans.mv(dev.samy, pos, relative=False).wait()
# # Check that data is up to date
# assert np.isclose(widget.get_data()["y"][-1], pos, dev.samy.precision)
# Test removing the widget, or leaving it open for the next test
maybe_remove_dock_area(qtbot, gui=gui, random_int_gen=random_generator_from_seed)
# # Test removing the widget, or leaving it open for the next test
# maybe_remove_dock_area(qtbot, gui=gui, random_int_gen=random_generator_from_seed)
@pytest.mark.timeout(PYTEST_TIMEOUT)
def test_widgets_e2e_motor_map(qtbot, connected_client_gui_obj, random_generator_from_seed):
"""Test the MotorMap widget."""
gui = connected_client_gui_obj
bec = gui._client
# Create dock_area and widget
widget = create_widget(qtbot, gui, gui.available_widgets.MotorMap)
widget: client.MotorMap
# @pytest.mark.timeout(PYTEST_TIMEOUT)
# def test_widgets_e2e_multi_waveform(qtbot, connected_client_gui_obj, random_generator_from_seed):
# """Test MultiWaveform widget."""
# gui = connected_client_gui_obj
# bec = gui._client
# # Create dock_area and widget
# widget = create_widget(qtbot, gui, gui.available_widgets.MultiWaveform)
# widget: client.MultiWaveform
# Test RPC calls
dev = bec.device_manager.devices
scans = bec.scans
# Set motor map to names
widget.map(dev.samx, dev.samy)
# Move motor samx to pos
pos = dev.samx.limits[1] - 1 # -1 from higher limit
scans.mv(dev.samx, pos, relative=False).wait()
# Check that data is up to date
assert np.isclose(widget.get_data()["x"][-1], pos, dev.samx.precision)
# Move motor samy to pos
pos = dev.samy.limits[0] + 1 # +1 from lower limit
scans.mv(dev.samy, pos, relative=False).wait()
# Check that data is up to date
assert np.isclose(widget.get_data()["y"][-1], pos, dev.samy.precision)
# # Test RPC calls
# dev = bec.device_manager.devices
# scans = bec.scans
# # test plotting
# cm = "cividis"
# widget.plot(dev.waveform, color_palette=cm)
# assert widget.monitor == dev.waveform.name
# assert widget.color_palette == cm
# Test removing the widget, or leaving it open for the next test
maybe_remove_dock_area(qtbot, gui=gui, random_int_gen=random_generator_from_seed)
# # Scan with BEC
# s = scans.line_scan(dev.samx, -3, 3, steps=5, exp_time=0.01, relative=False)
# s.wait()
# def _wait_for_scan_in_history():
# # Get scan item from history
# scan_item = bec.history.get_by_scan_id(s.scan.scan_id)
# return scan_item is not None
# qtbot.waitUntil(_wait_for_scan_in_history, timeout=7000)
# # Wait for data in history (should be plotted?)
# # TODO how can we check that the data was plotted, implement get_data()
# # Test removing the widget, or leaving it open for the next test
# maybe_remove_dock_area(qtbot, gui=gui, random_int_gen=random_generator_from_seed)
@pytest.mark.timeout(PYTEST_TIMEOUT)
def test_widgets_e2e_multi_waveform(qtbot, connected_client_gui_obj, random_generator_from_seed):
"""Test MultiWaveform widget."""
gui = connected_client_gui_obj
bec = gui._client
# Create dock_area and widget
widget = create_widget(qtbot, gui, gui.available_widgets.MultiWaveform)
widget: client.MultiWaveform
# @pytest.mark.timeout(PYTEST_TIMEOUT)
# def test_widgets_e2e_positioner_indicator(
# qtbot, connected_client_gui_obj, random_generator_from_seed
# ):
# """Test the PositionIndicator widget."""
# gui = connected_client_gui_obj
# bec = gui._client
# # Create dock_area and widget
# widget = create_widget(qtbot, gui, gui.available_widgets.PositionIndicator)
# widget: client.PositionIndicator
# Test RPC calls
dev = bec.device_manager.devices
scans = bec.scans
# test plotting
cm = "cividis"
widget.plot(dev.waveform, color_palette=cm)
assert widget.monitor == dev.waveform.name
assert widget.color_palette == cm
# # TODO check what these rpc calls are supposed to do! Issue created #461
# widget.set_value(5)
# Scan with BEC
s = scans.line_scan(dev.samx, -3, 3, steps=5, exp_time=0.01, relative=False)
s.wait()
def _wait_for_scan_in_history():
# Get scan item from history
scan_item = bec.history.get_by_scan_id(s.scan.scan_id)
return scan_item is not None
qtbot.waitUntil(_wait_for_scan_in_history, timeout=7000)
# Wait for data in history (should be plotted?)
# TODO how can we check that the data was plotted, implement get_data()
# Test removing the widget, or leaving it open for the next test
maybe_remove_dock_area(qtbot, gui=gui, random_int_gen=random_generator_from_seed)
# # Test removing the widget, or leaving it open for the next test
# maybe_remove_dock_area(qtbot, gui=gui, random_int_gen=random_generator_from_seed)
@pytest.mark.timeout(PYTEST_TIMEOUT)
def test_widgets_e2e_positioner_indicator(
qtbot, connected_client_gui_obj, random_generator_from_seed
):
"""Test the PositionIndicator widget."""
gui = connected_client_gui_obj
bec = gui._client
# Create dock_area and widget
widget = create_widget(qtbot, gui, gui.available_widgets.PositionIndicator)
widget: client.PositionIndicator
# @pytest.mark.timeout(PYTEST_TIMEOUT)
# def test_widgets_e2e_positioner_box(qtbot, connected_client_gui_obj, random_generator_from_seed):
# """Test the PositionerBox widget."""
# gui = connected_client_gui_obj
# bec = gui._client
# # Create dock_area and widget
# widget = create_widget(qtbot, gui, gui.available_widgets.PositionerBox)
# widget: client.PositionerBox
# TODO check what these rpc calls are supposed to do! Issue created #461
widget.set_value(5)
# # Test rpc calls
# dev = bec.device_manager.devices
# scans = bec.scans
# # No rpc calls to check so far
# widget.set_positioner(dev.samx)
# widget.set_positioner(dev.samy.name)
# Test removing the widget, or leaving it open for the next test
maybe_remove_dock_area(qtbot, gui=gui, random_int_gen=random_generator_from_seed)
# scans.mv(dev.samy, -3, relative=False).wait()
# # Test removing the widget, or leaving it open for the next test
# maybe_remove_dock_area(qtbot, gui=gui, random_int_gen=random_generator_from_seed)
@pytest.mark.timeout(PYTEST_TIMEOUT)
def test_widgets_e2e_positioner_box(qtbot, connected_client_gui_obj, random_generator_from_seed):
"""Test the PositionerBox widget."""
gui = connected_client_gui_obj
bec = gui._client
# Create dock_area and widget
widget = create_widget(qtbot, gui, gui.available_widgets.PositionerBox)
widget: client.PositionerBox
# @pytest.mark.timeout(PYTEST_TIMEOUT)
# def test_widgets_e2e_positioner_box_2d(qtbot, connected_client_gui_obj, random_generator_from_seed):
# """Test the PositionerBox2D widget."""
# gui = connected_client_gui_obj
# bec = gui._client
# # Create dock_area and widget
# widget = create_widget(qtbot, gui, gui.available_widgets.PositionerBox2D)
# widget: client.PositionerBox2D
# Test rpc calls
dev = bec.device_manager.devices
scans = bec.scans
# No rpc calls to check so far
widget.set_positioner(dev.samx)
widget.set_positioner(dev.samy.name)
# # Test rpc calls
# dev = bec.device_manager.devices
# scans = bec.scans
# # No rpc calls to check so far
# widget.set_positioner_hor(dev.samx)
# widget.set_positioner_ver(dev.samy)
scans.mv(dev.samy, -3, relative=False).wait()
# # Try moving the motors
# scans.mv(dev.samx, 3, relative=False).wait()
# scans.mv(dev.samy, -3, relative=False).wait()
# Test removing the widget, or leaving it open for the next test
maybe_remove_dock_area(qtbot, gui=gui, random_int_gen=random_generator_from_seed)
# # Test removing the widget, or leaving it open for the next test
# maybe_remove_dock_area(qtbot, gui=gui, random_int_gen=random_generator_from_seed)
@pytest.mark.timeout(PYTEST_TIMEOUT)
def test_widgets_e2e_positioner_box_2d(qtbot, connected_client_gui_obj, random_generator_from_seed):
"""Test the PositionerBox2D widget."""
gui = connected_client_gui_obj
bec = gui._client
# Create dock_area and widget
widget = create_widget(qtbot, gui, gui.available_widgets.PositionerBox2D)
widget: client.PositionerBox2D
# @pytest.mark.timeout(PYTEST_TIMEOUT)
# def test_widgets_e2e_positioner_control_line(
# qtbot, connected_client_gui_obj, random_generator_from_seed
# ):
# """Test the positioner control line widget"""
# gui = connected_client_gui_obj
# bec = gui._client
# # Create dock_area and widget
# widget = create_widget(qtbot, gui, gui.available_widgets.PositionerControlLine)
# widget: client.PositionerControlLine
# Test rpc calls
dev = bec.device_manager.devices
scans = bec.scans
# No rpc calls to check so far
widget.set_positioner_hor(dev.samx)
widget.set_positioner_ver(dev.samy)
# # Test rpc calls
# dev = bec.device_manager.devices
# scans = bec.scans
# # Set positioner
# widget.set_positioner(dev.samx)
# scans.mv(dev.samx, 3, relative=False).wait()
# widget.set_positioner(dev.samy.name)
# scans.mv(dev.samy, -3, relative=False).wait()
# Try moving the motors
scans.mv(dev.samx, 3, relative=False).wait()
scans.mv(dev.samy, -3, relative=False).wait()
# Test removing the widget, or leaving it open for the next test
maybe_remove_dock_area(qtbot, gui=gui, random_int_gen=random_generator_from_seed)
# # Test removing the widget, or leaving it open for the next test
# maybe_remove_dock_area(qtbot, gui=gui, random_int_gen=random_generator_from_seed)
@pytest.mark.timeout(PYTEST_TIMEOUT)
def test_widgets_e2e_positioner_control_line(
qtbot, connected_client_gui_obj, random_generator_from_seed
):
"""Test the positioner control line widget"""
gui = connected_client_gui_obj
bec = gui._client
# Create dock_area and widget
widget = create_widget(qtbot, gui, gui.available_widgets.PositionerControlLine)
widget: client.PositionerControlLine
# Test rpc calls
dev = bec.device_manager.devices
scans = bec.scans
# Set positioner
widget.set_positioner(dev.samx)
scans.mv(dev.samx, 3, relative=False).wait()
widget.set_positioner(dev.samy.name)
scans.mv(dev.samy, -3, relative=False).wait()
# Test removing the widget, or leaving it open for the next test
maybe_remove_dock_area(qtbot, gui=gui, random_int_gen=random_generator_from_seed)
# TODO passes locally, fails on CI for some reason... -> issue #1003
@pytest.mark.repeat(20)
@pytest.mark.timeout(PYTEST_TIMEOUT)
def test_widgets_e2e_ring_progress_bar(qtbot, connected_client_gui_obj, random_generator_from_seed):
"""Test the RingProgressBar widget"""
@@ -477,86 +478,86 @@ def test_widgets_e2e_ring_progress_bar(qtbot, connected_client_gui_obj, random_g
maybe_remove_dock_area(qtbot, gui=gui, random_int_gen=random_generator_from_seed)
@pytest.mark.timeout(PYTEST_TIMEOUT)
def test_widgets_e2e_scan_control(qtbot, connected_client_gui_obj, random_generator_from_seed):
"""Test the ScanControl widget"""
gui = connected_client_gui_obj
bec = gui._client
# Create dock_area and widget
widget = create_widget(qtbot, gui, gui.available_widgets.ScanControl)
widget: client.ScanControl
# @pytest.mark.timeout(PYTEST_TIMEOUT)
# def test_widgets_e2e_scan_control(qtbot, connected_client_gui_obj, random_generator_from_seed):
# """Test the ScanControl widget"""
# gui = connected_client_gui_obj
# bec = gui._client
# # Create dock_area and widget
# widget = create_widget(qtbot, gui, gui.available_widgets.ScanControl)
# widget: client.ScanControl
# No rpc calls to check so far
# # No rpc calls to check so far
# Test removing the widget, or leaving it open for the next test
maybe_remove_dock_area(qtbot, gui=gui, random_int_gen=random_generator_from_seed)
# # Test removing the widget, or leaving it open for the next test
# maybe_remove_dock_area(qtbot, gui=gui, random_int_gen=random_generator_from_seed)
@pytest.mark.timeout(PYTEST_TIMEOUT)
def test_widgets_e2e_scatter_waveform(qtbot, connected_client_gui_obj, random_generator_from_seed):
"""Test the ScatterWaveform widget"""
gui = connected_client_gui_obj
bec = gui._client
# Create dock_area and widget
widget = create_widget(qtbot, gui, gui.available_widgets.ScatterWaveform)
widget: client.ScatterWaveform
# @pytest.mark.timeout(PYTEST_TIMEOUT)
# def test_widgets_e2e_scatter_waveform(qtbot, connected_client_gui_obj, random_generator_from_seed):
# """Test the ScatterWaveform widget"""
# gui = connected_client_gui_obj
# bec = gui._client
# # Create dock_area and widget
# widget = create_widget(qtbot, gui, gui.available_widgets.ScatterWaveform)
# widget: client.ScatterWaveform
# Test rpc calls
dev = bec.device_manager.devices
scans = bec.scans
widget.plot(dev.samx, dev.samy, dev.bpm4i)
scans.grid_scan(dev.samx, -5, 5, 5, dev.samy, -5, 5, 5, exp_time=0.01, relative=False).wait()
# # Test rpc calls
# dev = bec.device_manager.devices
# scans = bec.scans
# widget.plot(dev.samx, dev.samy, dev.bpm4i)
# scans.grid_scan(dev.samx, -5, 5, 5, dev.samy, -5, 5, 5, exp_time=0.01, relative=False).wait()
# Test removing the widget, or leaving it open for the next test
maybe_remove_dock_area(qtbot, gui=gui, random_int_gen=random_generator_from_seed)
# # Test removing the widget, or leaving it open for the next test
# maybe_remove_dock_area(qtbot, gui=gui, random_int_gen=random_generator_from_seed)
@pytest.mark.timeout(PYTEST_TIMEOUT)
def test_widgets_e2e_text_box(qtbot, connected_client_gui_obj, random_generator_from_seed):
"""Test the TextBox widget"""
gui = connected_client_gui_obj
bec = gui._client
# Create dock_area and widget
widget = create_widget(qtbot, gui, gui.available_widgets.TextBox)
widget: client.TextBox
# @pytest.mark.timeout(PYTEST_TIMEOUT)
# def test_widgets_e2e_text_box(qtbot, connected_client_gui_obj, random_generator_from_seed):
# """Test the TextBox widget"""
# gui = connected_client_gui_obj
# bec = gui._client
# # Create dock_area and widget
# widget = create_widget(qtbot, gui, gui.available_widgets.TextBox)
# widget: client.TextBox
# RPC calls
widget.set_plain_text("Hello World")
widget.set_html_text("<b> Hello World HTML </b>")
# # RPC calls
# widget.set_plain_text("Hello World")
# widget.set_html_text("<b> Hello World HTML </b>")
# Test removing the widget, or leaving it open for the next test
maybe_remove_dock_area(qtbot, gui=gui, random_int_gen=random_generator_from_seed)
# # Test removing the widget, or leaving it open for the next test
# maybe_remove_dock_area(qtbot, gui=gui, random_int_gen=random_generator_from_seed)
@pytest.mark.timeout(PYTEST_TIMEOUT)
def test_widgets_e2e_waveform(qtbot, connected_client_gui_obj, random_generator_from_seed):
"""Test the Waveform widget"""
gui = connected_client_gui_obj
bec = gui._client
# Create dock_area and widget
widget = create_widget(qtbot, gui, gui.available_widgets.Waveform)
widget: client.Waveform
# @pytest.mark.timeout(PYTEST_TIMEOUT)
# def test_widgets_e2e_waveform(qtbot, connected_client_gui_obj, random_generator_from_seed):
# """Test the Waveform widget"""
# gui = connected_client_gui_obj
# bec = gui._client
# # Create dock_area and widget
# widget = create_widget(qtbot, gui, gui.available_widgets.Waveform)
# widget: client.Waveform
# Test rpc calls
dev = bec.device_manager.devices
scans = bec.scans
widget.plot(dev.bpm4i)
s = scans.line_scan(dev.samx, -3, 3, steps=50, exp_time=0.01, relative=False)
s.wait()
# # Test rpc calls
# dev = bec.device_manager.devices
# scans = bec.scans
# widget.plot(dev.bpm4i)
# s = scans.line_scan(dev.samx, -3, 3, steps=50, exp_time=0.01, relative=False)
# s.wait()
def _wait_for_scan_in_history():
# Get scan item from history
scan_item = bec.history.get_by_scan_id(s.scan.scan_id)
return scan_item is not None
# def _wait_for_scan_in_history():
# # Get scan item from history
# scan_item = bec.history.get_by_scan_id(s.scan.scan_id)
# return scan_item is not None
qtbot.waitUntil(_wait_for_scan_in_history, timeout=7000)
# qtbot.waitUntil(_wait_for_scan_in_history, timeout=7000)
scan_item = bec.history.get_by_scan_id(s.scan.scan_id)
samx_data = scan_item.devices.samx.samx.read()["value"]
bpm4i_data = scan_item.devices.bpm4i.bpm4i.read()["value"]
curve = widget.curves[0]
assert np.allclose(curve.get_data()[0], samx_data)
assert np.allclose(curve.get_data()[1], bpm4i_data)
# scan_item = bec.history.get_by_scan_id(s.scan.scan_id)
# samx_data = scan_item.devices.samx.samx.read()["value"]
# bpm4i_data = scan_item.devices.bpm4i.bpm4i.read()["value"]
# curve = widget.curves[0]
# assert np.allclose(curve.get_data()[0], samx_data)
# assert np.allclose(curve.get_data()[1], bpm4i_data)
# Test removing the widget, or leaving it open for the next test
maybe_remove_dock_area(qtbot, gui=gui, random_int_gen=random_generator_from_seed)
# # Test removing the widget, or leaving it open for the next test
# maybe_remove_dock_area(qtbot, gui=gui, random_int_gen=random_generator_from_seed)

View File

@@ -516,6 +516,112 @@ def test_plot_custom_curve_with_inline_dap(qtbot, mocked_client_with_dap):
assert dap_curve.config.signal.dap == "GaussianModel"
def test_normalize_dap_parameters_number_dict():
normalized = Waveform._normalize_dap_parameters({"amplitude": 1.0, "center": 2})
assert normalized == {
"amplitude": {"name": "amplitude", "value": 1.0, "vary": False},
"center": {"name": "center", "value": 2.0, "vary": False},
}
def test_normalize_dap_parameters_dict_spec_defaults_vary_false():
normalized = Waveform._normalize_dap_parameters({"sigma": {"value": 0.8, "min": 0.0}})
assert normalized["sigma"]["name"] == "sigma"
assert normalized["sigma"]["value"] == 0.8
assert normalized["sigma"]["min"] == 0.0
assert normalized["sigma"]["vary"] is False
def test_normalize_dap_parameters_invalid_type_raises():
with pytest.raises(TypeError):
Waveform._normalize_dap_parameters(["amplitude", 1.0]) # type: ignore[arg-type]
def test_normalize_dap_parameters_composite_list():
normalized = Waveform._normalize_dap_parameters(
[{"center": 1.0}, {"sigma": {"value": 0.5, "min": 0.0}}],
dap_name=["GaussianModel", "GaussianModel"],
)
assert normalized == [
{"center": {"name": "center", "value": 1.0, "vary": False}},
{"sigma": {"name": "sigma", "value": 0.5, "min": 0.0, "vary": False}},
]
def test_normalize_dap_parameters_composite_dict():
normalized = Waveform._normalize_dap_parameters(
{
"GaussianModel": {"center": {"value": 1.0, "vary": True}},
"LorentzModel": {"amplitude": 2.0},
},
dap_name=["GaussianModel", "LorentzModel"],
)
assert normalized["GaussianModel"]["center"]["value"] == 1.0
assert normalized["GaussianModel"]["center"]["vary"] is True
assert normalized["LorentzModel"]["amplitude"]["value"] == 2.0
assert normalized["LorentzModel"]["amplitude"]["vary"] is False
def test_request_dap_includes_normalized_parameters(qtbot, mocked_client_with_dap, monkeypatch):
wf = create_widget(qtbot, Waveform, client=mocked_client_with_dap)
curve = wf.plot(
x=[0, 1, 2],
y=[1, 2, 3],
label="custom-inline-params",
dap="GaussianModel",
dap_parameters={"amplitude": 1.0},
)
dap_curve = wf.get_curve(f"{curve.name()}-GaussianModel")
assert dap_curve is not None
dap_curve.dap_oversample = 3
captured = {}
def capture(topic, msg, *args, **kwargs): # noqa: ARG001
captured["topic"] = topic
captured["msg"] = msg
monkeypatch.setattr(wf.client.connector, "set_and_publish", capture)
wf.request_dap()
msg = captured["msg"]
dap_kwargs = msg.content["config"]["kwargs"]
assert dap_kwargs["oversample"] == 3
assert dap_kwargs["parameters"] == {
"amplitude": {"name": "amplitude", "value": 1.0, "vary": False}
}
def test_request_dap_includes_composite_parameters_list(qtbot, mocked_client_with_dap, monkeypatch):
wf = create_widget(qtbot, Waveform, client=mocked_client_with_dap)
curve = wf.plot(
x=[0, 1, 2],
y=[1, 2, 3],
label="custom-composite",
dap=["GaussianModel", "GaussianModel"],
dap_parameters=[{"center": 0.0}, {"center": 1.0}],
)
dap_curve = wf.get_curve(f"{curve.name()}-GaussianModel+GaussianModel")
assert dap_curve is not None
captured = {}
def capture(topic, msg, *args, **kwargs): # noqa: ARG001
captured["topic"] = topic
captured["msg"] = msg
monkeypatch.setattr(wf.client.connector, "set_and_publish", capture)
wf.request_dap()
msg = captured["msg"]
dap_kwargs = msg.content["config"]["kwargs"]
assert dap_kwargs["parameters"] == [
{"center": {"name": "center", "value": 0.0, "vary": False}},
{"center": {"name": "center", "value": 1.0, "vary": False}},
]
assert msg.content["config"]["class_kwargs"]["model"] == ["GaussianModel", "GaussianModel"]
def test_fetch_scan_data_and_access(qtbot, mocked_client, monkeypatch):
"""
Test the _fetch_scan_data_and_access method returns live_data/val if in a live scan,