57 Commits
v1.9.4 ... v1.1

Author SHA1 Message Date
8f86af959c version 1.0.0 -> 1.1.0 2017-08-24 08:31:32 +02:00
05fb2375e0 updated docu including DKS support and up-to-date macOS fink/macport setting up description. 2017-08-24 08:25:39 +02:00
f1b36a83cf re-enabled some variable settings needed for linux OpenCL. 2017-08-21 15:15:38 +02:00
de6275b5cf added DKS to the process variable. This makes sure that the DKS lib is always found. 2017-08-21 14:32:41 +02:00
08d67afb78 prevent double free. 2017-08-21 14:31:16 +02:00
25c7894fe0 fine tuning for OpenCL fallback. 2017-08-21 14:28:12 +02:00
49db148c37 added proper destructor. 2017-08-18 07:58:25 +02:00
b62d315d1f fixed a wrong variable initializer. 2017-08-17 13:55:13 +02:00
c49edda58e proper minimal ROOT version number check. 2017-08-17 13:36:03 +02:00
40337b00ad a first version which handles AMD cards as well. 2017-08-17 13:30:27 +02:00
2d4697c750 fixes a bug in the GPU memory allocation. 2017-08-17 13:29:25 +02:00
d397bf0064 fixed an issue with the month (0/1-problem). 2017-06-09 07:52:24 +02:00
26d78cf482 proper handling for DKS/GPU Fourier transform. 2017-05-31 16:21:53 +02:00
4a1b985506 added the missing DKS Fourier support flag. 2017-05-31 08:51:19 +02:00
bce9326f06 fix logy problem. 2017-05-29 18:02:31 +02:00
2b7a391bbb back-integrate DKS Fourier after DKS upgrade and modularization. Not yet tested other than compilation. 2017-05-29 17:54:57 +02:00
c2e362d406 added boost_system lib. 2017-05-29 17:52:49 +02:00
1729055385 merged from root6. Compiles but has issues with DKS linking yet. 2017-05-15 21:30:42 +02:00
13106a51c7 added root6 features to dks6 2017-02-21 14:47:33 +01:00
6cae76f1c1 fixed a little annoying bug in the LF none-analytic integral estimate. 2017-02-21 11:39:22 +01:00
3237b1f898 add forgotten header-file and include path
Conflicts:
	src/musredit_qt5/musredit.pro
2017-02-09 15:38:07 +01:00
2bf8648d35 Merge branch 'dks6' of https://git.psi.ch/nemu/musrfit into dks6 2017-02-08 12:36:35 +01:00
c5ac242e71 add git revision to the musredit about dialog. 2017-02-08 12:35:03 +01:00
e8f692b42c more changes towards musrfit/DKS/root6. 2017-02-08 11:16:27 +01:00
18d037fdf2 adopted dks to root6 (branch dks6). Not yet tested. 2017-02-07 16:12:49 +01:00
38c4293d58 resolved merge conflicts with master 2016-12-23 14:16:22 +01:00
605502386c Merge branch 'master' into dks 2016-11-08 10:02:33 +01:00
6aea6473ab merge dks to master 2016-08-25 08:40:40 +02:00
8f20d2fd4c musredit: run lists are now properly loaded if containing nS-nE elements. 2016-08-02 13:52:41 +02:00
ac30fd956b merged branch 'master' into 'dks' 2016-04-28 13:42:24 +02:00
ec27baf3a4 added c/const to the GPU ready functions. 2016-04-27 08:37:15 +02:00
bc881f0c75 moved CPU/GPU information collection from PFitter to musrfit. 2016-04-27 08:11:30 +02:00
da2f0a1049 (i) added mu minus. (ii) single histo is now fed with a proper error vector which covers all allowed background options. 2016-04-25 12:20:24 +02:00
319fb45f97 made startTimeBin and endTimeBin class variables. 2016-04-25 12:18:27 +02:00
71fbce110b added the function string mmsetf for DKS. 2016-04-25 12:16:56 +02:00
4dc36ffbae changed name of a function for a more precise self description. Added function to collect to mu minus parameters. 2016-04-25 12:15:36 +02:00
be9498f37d added muon minus specific function: muMinusExpTF/mmsetf 2016-04-25 12:05:42 +02:00
bdd8c16650 added fit type selector for DKS 2016-04-18 17:26:47 +02:00
aedacbcd34 added DKS asymmetry fit support 2016-04-15 16:47:40 +02:00
27eb664686 added missing DKS selector in GetPhaseOptRealFourier 2016-04-14 16:33:19 +02:00
f95a4c9078 added all the muSR specific analytic formulae 2016-04-14 14:53:55 +02:00
7dc9158a09 Merge branch 'master' into dks 2016-04-11 12:23:31 +02:00
1e0e19180f fixed error in sleep ms->s. Clean up left over debug information. 2016-04-11 12:21:47 +02:00
2a041d4878 removed debug information. Added CPU/GPU information to the MINUIT2.OUTPUT file. 2016-04-07 13:06:02 +02:00
6fa7bb5764 first DKS running version. Still a lot of testing needed. Currently only single histogram fitting with a limited number of functions is supported to run on the GPU. 2016-04-06 17:22:58 +02:00
a29b790e04 some more work towards DKS/GPU integration 2016-04-01 17:44:49 +02:00
ae77181f42 add memory handling for DKS/GPU. No fitting possible, yet. 2016-03-31 16:41:46 +02:00
5fb2ce777e some more work towards DKS/GPU support of musrfit 2016-03-10 15:52:48 +01:00
7b292980e5 added the class PFitterFcnDKS which eventually will handle the DKS/GPU binding. Currently it is without real functionality 2016-03-09 16:28:32 +01:00
d9782c55c8 added a theory translator for DKS 2016-03-08 16:23:18 +01:00
d9a35a25bb improved CUDA/DKS checks 2016-03-07 16:41:07 +01:00
b157d01506 merge into master 2016-03-04 13:23:12 +01:00
18564964fa calculate mean starting from fStartTime, if fStartTime > 0. 2015-04-17 10:29:20 +02:00
6ac3cdd798 corrected size for noOfFourierBins, and made switching between FFTW and DKS more coherent 2015-04-14 16:49:33 +02:00
a2601348cf first working FFT including DKS. 2015-04-13 17:21:27 +02:00
a393cb9ec5 fixed wrong Fourier vector size for DKS. 2015-04-08 17:24:24 +02:00
75578f1977 first work to add GPU support via DKS for Fourier. 2015-04-07 16:46:20 +02:00
1522 changed files with 54537 additions and 182682 deletions

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@ -1,5 +1,7 @@
#---------------------------------------------------------------------
# AUTHORS
# Andreas Suter, 2009/06/21
# $Id: AUTHORS 4013 2009-06-21
#---------------------------------------------------------------------
Andreas Suter <andreas.suter@psi.ch>
@ -7,9 +9,8 @@ Andreas Suter <andreas.suter@psi.ch>
Bastian M. Wojek
msr2data; initial testing; full initial documentation; BMWlibs;
Zaher Salman <zaher.salman@psi.ch>
beta-NMR and web-interface
unified building process on Linux, MacOSX and Windows (Cygwin)
through autotools
#---------------------------------------------------------------------
# this is the end ...

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@ -1,400 +0,0 @@
# - musrfit
cmake_minimum_required(VERSION 3.17)
project(musrfit VERSION 1.9.3 LANGUAGES C CXX)
#--- musrfit specific options -------------------------------------------------
option(nexus "build optional NeXus support. Needed for ISIS" OFF)
option(ASlibs "build optional ASlibs" OFF)
option(BMWlibs "build optional BMWlibs" OFF)
option(BNMRlibs "build optional beta-NMR libs" OFF)
option(DummyUserFcn "build optional dummy user function" OFF)
option(qt_based_tools "try to install Qt based tools (musredit, musrWiz, musrStep, mupp)" ON)
option(try_OpenMP "try to use OpenMP if available" ON)
# define qt_version with possible values 'auto' or version '3', '4', '5', '6'
set(qt_version AUTO CACHE STRING "provide a specific Qt version to be used.")
set_property(CACHE qt_version PROPERTY STRINGS AUTO 3 4 5 6)
#--- set a default build type if none was specified ---------------------------
set(default_build_type "Release")
if (NOT CMAKE_BUILD_TYPE AND NOT CMAKE_CONFIGURATION_TYPES)
message(STATUS "Setting build type to '${default_build_type}' as none was specified.")
set(CMAKE_BUILD_TYPE "${default_build_type}" CACHE
STRING "Choose the type of build." FORCE)
# Set the possible values of build type for cmake-gui
set_property(CACHE CMAKE_BUILD_TYPE PROPERTY STRINGS
"Debug" "Release" "MinSizeRel" "RelWithDebInfo")
endif ()
#--- perform some checks and generate the config.h ----------------------------
#--- the next two lines are needed that the math functions are found ----------
set(CMAKE_REQUIRED_INCLUDES math.h)
set(CMAKE_REQUIRED_LIBRARIES m)
include(CheckTypeSize)
include(CheckIncludeFiles)
include(CheckFunctionExists)
check_include_files(alloca.h HAVE_ALLOCA_H)
check_include_files("sys/ipc.h;sys/shm.h" HAVE_SHMGET)
check_include_files(dlfcn.h HAVE_DLFCN_H)
check_function_exists(erf HAVE_ERF)
check_function_exists(getloadavg HAVE_GETLOADAVG)
check_include_files(inttypes.h HAVE_INTTYPES_H)
check_include_files(memory.h HAVE_MEMORY_H)
check_function_exists(powl HAVE_POWL)
check_include_files(memory.h HAVE_MEMORY_H)
check_include_files(stdint.h HAVE_STDINT_H)
check_include_files(stdlib.h HAVE_STDLIB_H)
check_include_files(string.h HAVE_STRING_H)
check_include_files(strings.h HAVE_STRINGS_H)
check_include_files(sys/stat.h HAVE_SYS_STAT_H)
check_include_files(sys/types.h HAVE_SYS_TYPES_H)
check_include_files(sys/unistd.h HAVE_UNISTD_H)
check_type_size("long double" LONG_DOUBLE)
check_type_size("double" DOUBLE)
if (${LONG_DOUBLE} GREATER ${DOUBLE})
set(HAVE_LONG_DOUBLE 1)
set(HAVE_LONG_DOUBLE_WIDER 1)
endif (${LONG_DOUBLE} GREATER ${DOUBLE})
#--- check for all the needed packages ----------------------------------------
#--- add path to my own find modules and other stuff
set(CMAKE_MODULE_PATH ${CMAKE_CURRENT_SOURCE_DIR}/cmake)
#--- check for pkg-config -----------------------------------------------------
find_package(PkgConfig REQUIRED)
#--- check for git ------------------------------------------------------------
find_package(Git REQUIRED)
#--- check for ROOT -----------------------------------------------------------
find_package(ROOT 6.18 REQUIRED COMPONENTS Gui MathMore Minuit2 XMLParser)
if (ROOT_mathmore_FOUND)
execute_process(COMMAND root-config --bindir OUTPUT_VARIABLE ROOT_BINDIR)
string(STRIP ${ROOT_BINDIR} ROOT_BINDIR)
execute_process(COMMAND root-config --version OUTPUT_VARIABLE ROOT_VERSION)
string(STRIP ${ROOT_VERSION} ROOT_VERSION)
message("-- Found ROOT: ${ROOT_BINDIR} (found version: ${ROOT_VERSION})")
#---Define useful ROOT functions and macros (e.g. ROOT_GENERATE_DICTIONARY)
include(${ROOT_USE_FILE})
endif (ROOT_mathmore_FOUND)
#--- the next check is need to set a flag, since root 6.24 (minuit2) breaks
#--- the backwards compatibility. ---------------------------------------------
if (ROOT_VERSION VERSION_LESS "6.23")
set(ROOT_GRTEQ_24 0)
else ()
set(ROOT_GRTEQ_24 1)
endif ()
set(ROOT_GRTEQ_24 ${ROOT_GRTEQ_24} CACHE INTERNAL "ROOT Version check")
#--- check for boost ----------------------------------------------------------
find_package(Boost REQUIRED
COMPONENTS
system
filesystem
)
message(STATUS "Boost libs: ${Boost_LIBRARIES}")
#--- check for gsl ------------------------------------------------------------
find_package(GSL REQUIRED)
#--- check for fftw3 ----------------------------------------------------------
find_package(FFTW3 REQUIRED)
#--- check for libxml2 --------------------------------------------------------
find_package(LibXml2 REQUIRED)
#--- check for OpenMP ---------------------------------------------------------
if (try_OpenMP)
find_package(OpenMP)
if (OpenMP_CXX_FOUND)
add_definitions(-DHAVE_GOMP)
set(HAVE_GOMP 1 CACHE INTERNAL "Have GOMP")
endif (OpenMP_CXX_FOUND)
endif (try_OpenMP)
#--- check for Qt -------------------------------------------------------------
if (qt_based_tools)
# check for any Qt, i.e. AUTO
if (qt_version STREQUAL AUTO)
# try Qt6
find_package(Qt6Core QUIET)
if (Qt6Core_FOUND)
find_package(Qt6Widgets CONFIG REQUIRED)
find_package(Qt6Xml CONFIG REQUIRED)
find_package(Qt6Network CONFIG REQUIRED)
find_package(Qt6Svg CONFIG REQUIRED)
find_package(Qt6PrintSupport CONFIG REQUIRED)
endif (Qt6Core_FOUND)
# try Qt5
if (NOT Qt6Core_FOUND)
find_package(Qt5Core QUIET)
if (Qt5Core_FOUND)
find_package(Qt5Widgets CONFIG REQUIRED)
find_package(Qt5Xml CONFIG REQUIRED)
find_package(Qt5Network CONFIG REQUIRED)
find_package(Qt5Svg CONFIG REQUIRED)
find_package(Qt5PrintSupport CONFIG REQUIRED)
endif (Qt5Core_FOUND)
endif (NOT Qt6Core_FOUND)
# if Qt6 and Qt5 is not found, try Qt4
if (NOT Qt6Core_FOUND AND NOT Qt5Core_FOUND)
find_package(Qt4 COMPONENTS QtGui QtWebKit QtXml)
endif (NOT Qt6Core_FOUND AND NOT Qt5Core_FOUND)
# if Qt6, Qt5 and Qt4 is not found try Qt3. Hopefully you never reach this point
if (NOT Qt6Core_FOUND AND NOT Qt5Core_FOUND AND Qt4_FOUND)
find_package(Qt3)
endif (NOT Qt6Core_FOUND AND NOT Qt5Core_FOUND AND Qt4_FOUND)
endif (qt_version STREQUAL AUTO)
# check specifically for Qt6
if (qt_version STREQUAL 6)
find_package(Qt6Core)
if (Qt6Core_FOUND)
find_package(Qt6Widgets CONFIG REQUIRED)
find_package(Qt6Xml CONFIG REQUIRED)
find_package(Qt6Network CONFIG REQUIRED)
find_package(Qt6Svg CONFIG REQUIRED)
find_package(Qt6PrintSupport CONFIG REQUIRED)
else (Qt6Core_FOUND)
message(FATAL_ERROR "Couldn't find the specifically requested Qt6 version.")
endif (Qt6Core_FOUND)
endif (qt_version STREQUAL 6)
# check specifically for Qt5
if (qt_version STREQUAL 5)
find_package(Qt5Core)
if (Qt5Core_FOUND)
find_package(Qt5Widgets CONFIG REQUIRED)
find_package(Qt5Xml CONFIG REQUIRED)
find_package(Qt5Network CONFIG REQUIRED)
find_package(Qt5Svg CONFIG REQUIRED)
find_package(Qt5PrintSupport CONFIG REQUIRED)
else (Qt5Core_FOUND)
message(FATAL_ERROR "Couldn't find the specifically requested Qt5 version.")
endif (Qt5Core_FOUND)
endif (qt_version STREQUAL 5)
# check specifically for Qt4
if (qt_version STREQUAL 4)
find_package(Qt4 COMPONENTS QtGui QtWebKit QtXml)
if (NOT Qt4_FOUND)
message(FATAL_ERROR "Couldn't find the specifically requested Qt4 version.")
endif (NOT Qt4_FOUND)
endif (qt_version STREQUAL 4)
# check specifically for Qt3
if (qt_version STREQUAL 3)
find_package(Qt3)
if (NOT QT_FOUND)
message(FATAL_ERROR "Couldn't find the specifically requested Qt3 version.")
endif (NOT QT_FOUND)
endif (qt_version STREQUAL 3)
endif (qt_based_tools)
#--- if NeXus check also for HDF4, HDF5, and MXML -----------------------------
if (nexus)
find_package(HDF5 COMPONENTS CXX REQUIRED )
find_package(HDF4 REQUIRED)
find_package(NEXUS REQUIRED)
add_definitions(-DPNEXUS_ENABLED)
endif (nexus)
#--- check for Cuba lib if BMWlibs are enabled --------------------------------
#//as35 probably always stick to the internal one ...
#--- all checks done -> feed config.h -----------------------------------------
set(HAVE_CONFIG_H 1 CACHE INTERNAL "config.h is available")
configure_file(${CMAKE_SOURCE_DIR}/cmake/config.h.in ${CMAKE_CURRENT_BINARY_DIR}/config.h)
#--- check if project source is a git repo ------------------------------------
if (EXISTS "${CMAKE_SOURCE_DIR}/.git/HEAD")
message(STATUS "is a git repo")
set(IS_GIT_REPO 1)
else ()
message(STATUS "is NOT a git repo")
set(IS_GIT_REPO 0)
endif ()
#--- rpath related things -----------------------------------------------------
# use, i.e. don't skip the full RPATH for the build tree
set(CMAKE_SKIP_BUILD_RPATH FALSE)
# when building, don't use the install RPATH already
# (but later on when installing)
set(CMAKE_BUILD_WITH_INSTALL_RPATH FALSE)
set(CMAKE_INSTALL_RPATH "${CMAKE_INSTALL_PREFIX}/lib")
# add the automatically determined parts of the RPATH
# which point to directories outside the build tree to the install RPATH
set(CMAKE_INSTALL_RPATH_USE_LINK_PATH TRUE)
# the RPATH to be used when installing, but only if it's not a system directory
list(FIND CMAKE_PLATFORM_IMPLICIT_LINK_DIRECTORIES "${CMAKE_INSTALL_PREFIX}/lib" isSystemDir)
if("${isSystemDir}" STREQUAL "-1")
set(CMAKE_INSTALL_RPATH "${CMAKE_INSTALL_PREFIX}/lib")
endif("${isSystemDir}" STREQUAL "-1")
set(rpath ${CMAKE_INSTALL_RPATH})
string(APPEND rpath ";/usr/local/lib")
set(CMAKE_INSTALL_RPATH "${rpath}")
#--- propagate to the sub-directories -----------------------------------------
add_subdirectory(src)
#--- write summary of the installation
message("")
message("|-----------------------------------------------------------------------|")
message("| |")
message("| Summary |")
message("| |")
message("|-----------------------------------------------------------------------|")
message("")
message(" System: ${CMAKE_HOST_SYSTEM_NAME} ${CMAKE_SYSTEM_PROCESSOR} - ${CMAKE_HOST_SYSTEM_VERSION}")
message(" -------")
message("")
message(" musrfit Version: ${musrfit_VERSION}")
message(" ----------------")
message("")
message(" Build Type: ${CMAKE_BUILD_TYPE}")
message(" -----------")
message("")
message(" Requirements:")
message(" -------------")
message("")
message(" FFTW3 found in ${FFTW3_INCLUDE}, Version: ${FFTW_VERSION}")
message(" GSL found in ${GSL_INCLUDE_DIRS}, Version: ${GSL_VERSION}")
message(" BOOST found in ${Boost_INCLUDE_DIRS}, Version: ${Boost_VERSION}")
message(" LibXML2 found in ${LIBXML2_INCLUDE_DIR}, Version: ${LIBXML2_VERSION_STRING}")
message(" ROOT found in ${ROOT_INCLUDE_DIRS}, Version: ${ROOT_VERSION}")
if (OpenMP_FOUND)
if (OpenMP_CXX_VERSION)
message(" OpenMP found Version: ${OpenMP_CXX_VERSION}")
else (OpenMP_CXX_VERSION)
message(" OpenMP found")
endif (OpenMP_CXX_VERSION)
endif (OpenMP_FOUND)
if (nexus)
message("")
message(" HDF4 found in ${HDF4_INCLUDE_DIRS}")
message(" HDF5 found in ${HDF5_INCLUDE_DIRS}, Version: ${HDF5_VERSION}")
message(" NeXus found in ${NEXUS_INCLUDE_DIR}, Version: ${NEXUS_VERSION_STRING}")
endif (nexus)
message("")
if (qt_based_tools)
if (Qt6Core_FOUND)
message(" Qt found in ${Qt6Core_INCLUDE_DIRS}, Version: ${Qt6Core_VERSION}")
else (Qt6Core_FOUND)
if (Qt5Core_FOUND)
message(" Qt found in ${Qt5Core_INCLUDE_DIRS}, Version: ${Qt5Core_VERSION}")
else (Qt5Core_FOUND)
if (Qt4_FOUND)
message(" Qt found Version: ${QT_VERSION_MAJOR}.${QT_VERSION_MINOR}.${QT_VERSION_PATCH}")
else (Qt4_FOUND)
if (QT_FOUND)
message(" Qt found Version: ${QT_VERSION}")
endif (QT_FOUND)
endif (Qt4_FOUND)
endif (Qt5Core_FOUND)
endif (Qt6Core_FOUND)
endif (qt_based_tools)
message("")
message(" Features:")
message(" ---------")
message("")
message(" Supported muSR file formates:")
message(" MusrRoot : yes")
message(" ROOT (LEM) : yes")
message(" MUD (triumf) : yes")
message(" PSI-BIN : yes")
message(" PSI-MDU : yes")
message(" WKM (deprecated) : yes")
if (nexus)
message(" NeXus : yes")
else (nexus)
message(" NeXus : no")
endif (nexus)
message("")
message(" External user-function libraries:")
if (ASlibs)
message(" ASlibs : yes")
else (ASlibs)
message(" ASlibs : no")
endif (ASlibs)
if (BMWlibs)
message(" BMWlibs : yes")
else (BMWlibs)
message(" BMWlibs : no")
endif (BMWlibs)
if (BNMRlibs)
message(" BNMRlibs : yes")
else (BNMRlibs)
message(" BNMRlibs : no")
endif (BNMRlibs)
if (DummyUserFcn)
message(" PDummyUserFcn : yes")
endif (DummyUserFcn)
if (qt_based_tools)
if (Qt6Core_FOUND)
message("")
message(" Qt6 based tools:")
message(" musredit, musrStep, musrWiz, mupp : yes")
elseif (Qt5Core_FOUND)
message("")
message(" Qt5 based tools:")
message(" musredit, musrStep, musrWiz, mupp : yes")
elseif (Qt4_FOUND)
message("")
message(" Qt4 based tools (deprecated):")
message(" musredit : yes")
else ()
message("")
message(" Qt3 based tools (outdated):")
message(" musrgui : yes")
endif ()
if (NOT Qt6Core_FOUND AND NOT Qt5Core_FOUND AND NOT Qt4_FOUND AND NOT QT_FOUND)
message("")
message(" NO Qt based tools will be installed since Qt is not found or not installed on the system")
endif (NOT Qt6Core_FOUND AND NOT Qt5Core_FOUND AND NOT Qt4_FOUND AND NOT QT_FOUND)
else (qt_based_tools)
message("")
message(" Qt based tools (musredit, musrStep, musrWiz, mupp) have been disabled")
endif (qt_based_tools)
message("")
message(" Installation directories:")
message(" -------------------------")
message("")
message(" Programs : ${CMAKE_INSTALL_PREFIX}/bin")
message(" XML configuration files : " $ENV{HOME} "/.musrfit")
message(" Documentation : ${CMAKE_INSTALL_PREFIX}/share/doc/musrfit")
message("")
message("-------------------------------------------------------------------------")
message("")
#--- cpack specific info ......................................................
file(TO_NATIVE_PATH ${PROJECT_SOURCE_DIR} PROJECT_SOURCE_DIR_NATIVE)
file(TO_NATIVE_PATH ${PROJECT_BINARY_DIR} PROJECT_BINARY_DIR_NATIVE)
string(REPLACE "\\" "\\\\" PROJECT_SOURCE_DIR_NATIVE_D ${PROJECT_SOURCE_DIR_NATIVE})
string(REPLACE "\\" "\\\\" PROJECT_BINARY_DIR_NATIVE_D ${PROJECT_BINARY_DIR_NATIVE})
configure_file(${CMAKE_SOURCE_DIR}/cmake/CPackOptions.cmake.in ${CMAKE_CURRENT_BINARY_DIR}/CPackOptions.cmake @ONLY)
set (CPACK_PROJECT_CONFIG_FILE "${PROJECT_BINARY_DIR}/CPackOptions.cmake")
#set (CPACK_GENERATOR TGZ) # not use ZIP on UNIX as problem with symlinks
#set (CPACK_SOURCE_GENERATOR TGZ) # not use ZIP on UNIX as problem with symlinks
if (UNIX)
set (CPACK_GENERATOR ${CPACK_GENERATOR};RPM)
endif ()
# Include of CPack must always be last
include(CPack)
#--- end ----------------------------------------------------------------------

169
ChangeLog
View File

@ -2,9 +2,7 @@
# ChangeLog
#---------------------------------------------------------------------
The ChangeLog will describe feature changes rather than coding detail changes.
For detailed information about changes have a look here:
rather than updating this document, the changes can be followed here:
https://gitlab.psi.ch/nemu/musrfit/activity
@ -12,169 +10,6 @@ or
https://bitbucket.org/muonspin/musrfit/commits/all
Release of V1.9.3, 2024/04/19
=============================
fix of function string generation from AST.
Release of V1.9.2, 2023/10/25
=============================
switch over to smart pointers wherever possible.
Release of V1.9.1, 2023/05/16
=============================
add option [-c, --count] to dump_header which will dump the number of counts
per detector and the total number of counts. Currently for MusrRoot data format
only. For the other data formats it will be implement asap
Release of V1.9.0, 2023/02/17
=============================
add depth profile user lib:
A.F.A. Simões, et al.
Muon implantation experiments in films: obtaining depth-resolved information
Review of Scientific Instruments. 2020; 91(2): 023906 (7 pp.).
Release of V1.8.2, 2022/12/03
=============================
add feature that mupp_plotter can show/hide lines between the data points.
Release of V1.8.1, 2022/11/07
=============================
adopted to the newer Qt versions.
Release of V1.8.0, 2022/05/22
=============================
new: addRun - allows to add runs and write it to file
refactoring of Class_MuSR_PSI: (i) class variables and methods renamed according to ROOT
rules. (ii) start to modernize to newer c++ standards.
Release of V1.7.6, 2021/10/02
=============================
new: choose number of threads from the commandline for OpenMP.
Release of V1.7.5, 2021/09/22
=============================
make sure that phases stay within +-360 degrees.
Release of V1.7.4, 2021/06/16
=============================
allow in asymmetry fits #forward groups != #backward groups
Release of V1.7.3, 2021/06/01
=============================
making musrfit Apple Silicon M1 ready. Currently there is still an open issue
with NeXus (HDF4 only).
Release of V1.7.2, 2021/04/16
=============================
add a full dummy user function class with a global part. This can be used as
a starting point to develop new polarization functions.
Currently no rge-handling present.
Release of V1.7.1, 2021/04/09
=============================
update of the docu. More version info. Dealing with the upcoming ROOT V6.24.
Release of V1.7.0, 2021/04/30
=============================
Centralize the rge-handling for user functions.
Release of V1.6.5, 2021/01/22
=============================
Add Qt6 version of musredit, mupp, etc.
Release of V1.6.4, 2020/08/29
=============================
Allow to view time spectra and Fourier theory only calculated at the data points
via the option '-1' or '--one_to_one'.
Release of V1.6.3, 2020/07/27
=============================
A single asymmetry plot allows to toggle the color of the theory function line
by the key 't'.
Release of V1.6.2, 2020/06/17
=============================
Functions not only can use parameters and maps but now also meta data from the
data files like, field (B or b), energy (En or en), or temperature (T<x> pr t<x>
where <x> is a number starting from 0, e.g. t0).
Release of V1.6.1, 2020/05/25
=============================
For asymmetry fits: allow alpha, beta in the RUN block to be functions.
Release of V1.6.0, 2020/05/16
=============================
Allow to transform parameter vectors of run collections for mupp.
This allows for instance to calculate the superfluid density directly from the
depolarization rate and plot it.
Release of V1.5.2, 2020/02/03
=============================
Implemented a SECTOR command. It allows to get chisq/maxLH information from
different time sector slots.
Release of V1.5.0, 2019/05/15
=============================
Added beta-NMR support (thanks to Zaher Salman).
Release of V1.4.2, 2019/03/08
=============================
The tool chain support for automake is removed. Only the cmake tool chain is
supported from now one.
Release of V1.2.0, 2017/10/26
=============================
Adopted to be ready for rpm builds in a first step. This will be followed by debian style
packages.
Release of V1.1.0, 2017/10/26
=============================
Added full DKS support, i.e. additionally to CUDA also OpenCL for GPU's and CPU's in place.
Release of V1.0.0, 2017/05/18
=============================
I feel that musrfit has majored enough to lift it to its first full version, i.e. V1.0.0.
A lot of bug fixing went into it since 0.18.0. It is now also fully ROOT 6 compatible which
is also the main supported version now.
New features:
* musrWiz: a wizard which will help the user to get started to generate msr-files.
* musrStep: a little helper program which allows to reset the step size of a msr-file.
This is useful if you deal with a lot of detectors (e.g. HAL-9500 at PSI).
* auto-phase correction of Fourier transforms: this is still in its early stage but will
eventually provide a real phase corrected Fourier transform, which will allow
a real Fourier detector average.
* the startup file handling has improved substantially.
changes since 0.18.0
===================================
@ -200,6 +35,7 @@ NEW 2016-04-28 msr2data gets a new option: paramList which allows to
extract a subset of all the parameters of a collection
of msr-files.
NEW 2016-04-22 Added the theory function muMinusExpTF for mu minus fits
NEW 2016-03-08 added a theory translator for DKS
NEW 2016-02-23 It is now possible to export the averaged data/Fourier
CHANGED 2016-12-18 updated the docu.
CHANGED 2016-12-18 a couple of little improvements in musredit.
@ -207,6 +43,7 @@ CHANGED 2016-08-10 drop NeXus support for Version < 4.4
CHANGED 2016-04-26 start-/endTimeBin are now class members. This reduces
the number of recalculations.
FIXED 2016-08-02 run lists are now properly loaded if containing nS-nE elements.
FIXED 2016-04-14 added missing DKS selector in GetPhaseOptRealFourier.
changes since 0.16.0
===================================

47
INSTALL
View File

@ -1,49 +1,20 @@
#---------------------------------------------------------------------
# INSTALL
# AS/BMW, 2014/02/11; 2011/01/27
#---------------------------------------------------------------------
In the following it is assumed that the system variable ROOTSYS is already
defined and pointing to the place where CERN/ROOT is installed.
To get it all build:
#----------------------------------
# Install via cmake tool chain
#----------------------------------
cmake minimal required version is 3.6.
musrfit supports only out-of-source cmake build! Hence, go to the musrfit
directory and
mkdir build
cd build
cmake ../ -DCMAKE_INSTALL_PREFIX=$ROOTSYS (or where ever musrfit should be installed)
cmake --build ./ --clean-first
sh autogen.sh
./configure --prefix=/opt/cern/root (or where ever musrfit should be installed)
make
make install (as superuser -- maybe)
/sbin/ldconfig (as superuser)
cmake configuration allows a couple of switches. For details check the documentation at
In the optimal case, everything is set up ;-)
http://lmu.web.psi.ch/musrfit/user/MUSR/MusrFitSetup.html
More information about the software requirements and the installation can be found at:
An example with NeXus support and BMWlibs needed would look like this
mkdir build
cd build
cmake ../ -Dnexus=1 -DBMWlibs=1 -DCMAKE_INSTALL_PREFIX=$ROOTSYS
cmake --build ./ --clean-first
make install (as superuser -- maybe)
/sbin/ldconfig (as superuser)
In the optimal case everything is ready to be used ;-)
#----------------------------------
# Link to the documentation
#----------------------------------
More information regarding software requirements and the installation process
can be found here:
http://lmu.web.psi.ch/musrfit/user/MUSR/MusrFitSetup.html
http://lmu.web.psi.ch/musrfit/user/MUSR/MusrFitSetup.html
#---------------------------------------------------------------------
# this is the end ...

44
Makefile.am Normal file
View File

@ -0,0 +1,44 @@
## Process this file with automake to create Makefile.in
SUBDIRS = src
EXTRA_DIST = autogen.sh acinclude.m4
# The following is to install the documentation
# It is a bit lengthy because one cannot simply install whole directories (except copying them recursively -- which also takes the .svn directories...)
DOCDIRS = examples \
examples/data \
examples/ASlibs \
examples/ASlibs/data \
examples/ASlibs/profiles \
examples/BMWlibs \
examples/BMWlibs/data \
examples/BMWlibs/profiles \
html/user \
html/user/MUSR \
html/user/pub/Main/SmiliesPluginPSI \
html/user/pub/Main/WebPreferences \
html/user/pub/MUSR/LibFitPofB \
html/user/pub/MUSR/LibZFRelaxation \
html/user/pub/MUSR/Msr2Data \
html/user/pub/MUSR/MusrFit \
html/user/pub/MUSR/MusrGui \
html/user/pub/MUSR/QuickStart \
html/user/pub/MUSR/TutorialSingleHisto \
html/user/pub/System/DocumentGraphics \
html/user/pub/System/HeadlinesPlugin \
html/user/pub/System/PatternSkin \
html/user/pub/System/PatternSkinTheme2009 \
html/user/pub/System/PsiSkin \
html/user/pub/System/SkinTemplates
#html/technical
install-data-hook:
@$(NORMAL_INSTALL)
for DIR in $(DOCDIRS); do $(MKDIR_P) $(DOCDIR)/$$DIR; $(INSTALL_DATA) doc/$$DIR/*.* $(DOCDIR)/$$DIR; done
$(MKDIR_P) $(DOCDIR)/latex_images
$(INSTALL_DATA) src/musredit/latex_images/*.png $(DOCDIR)/latex_images
uninstall-hook:
@$(NORMAL_UNINSTALL)
rm -rf $(DOCDIR)

38
README
View File

@ -1,43 +1,35 @@
README
------
musrfit - muSR and beta-NMR data analysis package
musrfit - muSR data analysis package
Contents
--------
This is a data analysis package to analyze time differential muSR and beta-NMR data.
Currently it allows the following:
Currently it allows the following things:
* set up most commonly used fitting functions for muSR and beta-NMR
* fit data, including global fits
* show the fit results and the residuals
* show the Fourier transform of the data
* easily extract the fit parameters and import in other programs (gnuplot, qtiplot/origin, ...)
* generate input fitting files for follow-up runs
* generate global input fitting files based on a single run template
* implement more sophisticated user functions
* setting up most commonly used fitting functions for muSR and beta-NMR
* fitting data, including global fits
* showing the fit results and the residuals
* showing the Fourier transform of the data
* extracting easily the fitting parameters to be used in other programs (gnuplot, qtiplot/origin, ...)
* allows to generate fitting input files for follow-up runs
* allows to generate global fitting input files based on a single run template
* allows to implement more sophisticated user functions
(e.g. GL vortex lattice, Meissner screening including low-energy muon stopping profiles)
Currently supported platforms
-----------------------------
Currently supported platforms:
* Linux
* Mac OS X
* Windows 10 1809 or newer - current state is for the commited ones
* Web based implementation - http://musruser.psi.ch/cgi-bin/musrfit.cgi
* Windows - not really, only for the very brave ones
Documentation
-------------
For a more exhaustive user documentation see:
http://lmu.web.psi.ch/musrfit/user/html/index.html
http://lmu.web.psi.ch/musrfit/user/MUSR/WebHome.html
Contacts
Contact
<andreas.suter@psi.ch>
For the beta-NMR related parts, please contact
<zaher.salman@psi.ch>
<andreas.suter@psi.ch>

View File

@ -1,37 +1,33 @@
# musrfit - muSR and beta-NMR data analysis package #
# musrfit - muSR data analysis package #
### Contents ###
This is a data analysis package to analyze time differential muSR and beta-NMR data.
Currently it allows the following:
This is a data analysis package to analyze time differential muSR and beta-NMR data.
Currently it allows the following things:
* set up most commonly used fitting functions for muSR and beta-NMR
* fit data, including global fits
* show the fit results and the residuals
* show the Fourier transform of the data
* easily extract the fit parameters and import in other programs (gnuplot, qtiplot/origin, ...)
* generate input fitting files for follow-up runs
* generate global input fitting files based on a single run template
* implement more sophisticated user functions
* setting up most commonly used fitting functions for muSR and beta-NMR
* fitting data, including global fits
* showing the fit results and the residuals
* showing the Fourier transform of the data
* extracting easily the fitting parameters to be used in other programs (gnuplot, qtiplot/origin, ...)
* allows to generate fitting input files for follow-up runs
* allows to generate global fitting input files based on a single run template
* allows to implement more sophisticated user functions
(e.g. GL vortex lattice, Meissner screening including low-energy muon stopping profiles)
### Currently supported platforms: ###
* Linux
* Mac OS X
* Windows 10 1809 or newer - current state is for the commited ones
* Web based implementation - http://musruser.psi.ch/cgi-bin/musrfit.cgi
* Windows - not really, only for the very brave ones
### Documentation ####
For a more exhaustive user documentation see:
http://lmu.web.psi.ch/musrfit/user/html/index.html
http://lmu.web.psi.ch/musrfit/user/MUSR/WebHome.html
### Contacts ###
### Contact ###
<andreas.suter@psi.ch>
For the beta-NMR related parts, please contact Zaher Salman
<zaher.salman@psi.ch>

128
acinclude.m4 Normal file
View File

@ -0,0 +1,128 @@
dnl -*- mode: autoconf -*-
dnl
dnl $Id: root.m4,v 1.3 2005/03/21 21:42:21 rdm Exp $
dnl $Author: rdm $
dnl $Date: 2005/03/21 21:42:21 $
dnl
dnl Autoconf macro to check for existence or ROOT on the system
dnl Synopsis:
dnl
dnl ROOT_PATH([MINIMUM-VERSION, [ACTION-IF-FOUND, [ACTION-IF-NOT-FOUND]]])
dnl
dnl Some examples:
dnl
dnl ROOT_PATH(3.03/05, , AC_MSG_ERROR(Your ROOT version is too old))
dnl ROOT_PATH(, AC_DEFINE([HAVE_ROOT]))
dnl
dnl The macro defines the following substitution variables
dnl
dnl ROOTCONF full path to root-config
dnl ROOTEXEC full path to root
dnl ROOTCLING full path to rootcling
dnl ROOTLIBDIR Where the ROOT libraries are
dnl ROOTINCDIR Where the ROOT headers are
dnl ROOTETCDIR Where the ROOT configuration is
dnl ROOTCFLAGS Extra compiler flags
dnl ROOTLIBS ROOT basic libraries
dnl ROOTGLIBS ROOT basic + GUI libraries
dnl ROOTAUXLIBS Auxilary libraries and linker flags for ROOT
dnl ROOTAUXCFLAGS Auxilary compiler flags
dnl ROOTRPATH Same as ROOTLIBDIR
dnl
dnl The macro will fail if root-config and rootcling isn't found.
dnl
dnl Christian Holm Christensen <cholm@nbi.dk>
dnl
AC_DEFUN([ROOT_PATH],
[
AC_ARG_WITH([rootsys],
[AC_HELP_STRING([--with-rootsys],
[top of the ROOT installation directory])],
[user_rootsys=$withval],
[user_rootsys="none"])
if test ! x"$user_rootsys" = xnone; then
rootbin="$user_rootsys/bin"
elif test ! x"$ROOTSYS" = x ; then
rootbin="$ROOTSYS/bin"
else
rootbin=$PATH
fi
AC_PATH_PROG(ROOTCONF, root-config , no, $rootbin)
AC_PATH_PROG(ROOTEXEC, root , no, $rootbin)
AC_PATH_PROG(ROOTCLING, rootcling , no, $rootbin)
if test ! x"$ROOTCONF" = "xno" && \
test ! x"$ROOTCLING" = "xno" ; then
# define some variables
ROOTLIBDIR=`$ROOTCONF --libdir`
ROOTINCDIR=`$ROOTCONF --incdir`
ROOTETCDIR=`$ROOTCONF --etcdir`
ROOTCFLAGS=`$ROOTCONF --noauxcflags --cflags`
ROOTLIBS=`$ROOTCONF --noauxlibs --noldflags --libs`
ROOTGLIBS=`$ROOTCONF --noauxlibs --noldflags --glibs`
ROOTAUXCFLAGS=`$ROOTCONF --auxcflags`
ROOTAUXLIBS=`$ROOTCONF --auxlibs`
ROOTRPATH=$ROOTLIBDIR
ROOTVERSION=`$ROOTCONF --version`
ROOTSOVERSION=`dirname $ROOTVERSION`
if test $1 ; then
AC_MSG_CHECKING(whether ROOT version >= [$1])
vers=`$ROOTCONF --version | tr './' ' ' | awk 'BEGIN { FS = " "; } { printf "%d", ($''1 * 1000 + $''2) * 1000 + $''3;}'`
requ=`echo $1 | tr './' ' ' | awk 'BEGIN { FS = " "; } { printf "%d", ($''1 * 1000 + $''2) * 1000 + $''3;}'`
if test $vers -lt $requ ; then
AC_MSG_RESULT(no)
no_root="yes"
else
AC_MSG_RESULT(yes)
fi
fi
else
# otherwise, we say no_root
no_root="yes"
fi
AC_SUBST(ROOTLIBDIR)
AC_SUBST(ROOTINCDIR)
AC_SUBST(ROOTETCDIR)
AC_SUBST(ROOTCFLAGS)
AC_SUBST(ROOTLIBS)
AC_SUBST(ROOTGLIBS)
AC_SUBST(ROOTAUXLIBS)
AC_SUBST(ROOTAUXCFLAGS)
AC_SUBST(ROOTRPATH)
AC_SUBST(ROOTVERSION)
AC_SUBST(ROOTSOVERSION)
if test "x$no_root" = "x" ; then
ifelse([$2], , :, [$2])
else
ifelse([$3], , :, [$3])
fi
])
#
# Macro to check if ROOT has a specific feature:
#
# ROOT_FEATURE(FEATURE,[ACTION_IF_HAVE,[ACTION_IF_NOT]])
#
# For example
#
# ROOT_FEATURE([ldap],[AC_DEFINE([HAVE_ROOT_LDAP])])
#
AC_DEFUN([ROOT_FEATURE],
[
AC_REQUIRE([ROOT_PATH])
feat=$1
res=`$ROOTCONF --has-$feat`
if test "x$res" = "xyes" ; then
ifelse([$2], , :, [$2])
else
ifelse([$3], , :, [$3])
fi
])
#
# EOF
#

101
autogen.sh Executable file
View File

@ -0,0 +1,101 @@
#! /bin/sh
# autogen.sh
#
# Copyright (c) 2009 BMW
# Copyright (c) 2002 Daniel Elstner <daniel.elstner@gmx.net>
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License VERSION 2 as
# published by the Free Software Foundation. You are not allowed to
# use any other version of the license; unless you got the explicit
# permission from the author to do so.
#
# This program is distributed in the hope that it will be useful,
# but WITHOUT ANY WARRANTY; without even the implied warranty of
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
# GNU General Public License for more details.
#
# You should have received a copy of the GNU General Public License
# along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
PATHTOAUTOCONF=$(which autoconf)
PATHTOAUTOMAKE=$(which automake)
PATHTOLIBTOOL=$(which libtoolize)
PATHTOGLIBTOOL=
if [ "$PATHTOLIBTOOL" = "" ]; then
PATHTOGLIBTOOL=$(which glibtoolize)
fi
if [ "$PATHTOAUTOCONF" = "" ]; then
echo
echo ">> GNU autoconf has not been found!"
echo ">> Please install it first and then re-run the script!"
echo
exit 1
elif [ "$PATHTOAUTOMAKE" = "" ]; then
echo
echo ">> GNU automake has not been found!"
echo ">> Please install it first and then re-run the script!"
echo
exit 1
elif [ "$PATHTOLIBTOOL" = "" ] && [ "$PATHTOGLIBTOOL" = "" ]; then
echo
echo ">> GNU libtool has not been found!"
echo ">> Please install it first and then re-run the script!"
echo
exit 1
fi
if [ "$PATHTOLIBTOOL" = "" ]; then
LIBTOOLIZE="glibtoolize"
else
LIBTOOLIZE="libtoolize"
fi
dir=`echo "$0" | sed 's,[^/]*$,,'`
test "x${dir}" = "x" && dir='.'
if test "x`cd "${dir}" 2>/dev/null && pwd`" != "x`pwd`"
then
echo "This script must be executed directly from the source directory!"
exit 1
fi
if !(test -d admin); then
mkdir admin
fi
rm -f config.cache
if test -e admin/depcomp && \
test -e admin/install-sh && \
test -e admin/ltmain.sh && \
test -e admin/missing && \
test -e aclocal.m4
then
echo ">> autoreconf" && \
autoreconf && exit 0
else
echo "" && \
echo "+++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++" && \
echo "+ This script prepares the building environment for the configuration of +" && \
echo "+ musrfit. During this process some informative messages might appear which +" && \
echo "+ can safely be ignored as long as they are not tagged as errors. +" && \
echo "+++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++" && \
echo "" && \
echo ">> libtoolize" && \
$LIBTOOLIZE --force && \
echo ">> aclocal" && \
aclocal && \
echo ">> autoconf" && \
autoconf && \
echo ">> autoheader" && \
autoheader && \
echo ">> automake" && \
automake --add-missing --gnu && exit 0
fi
exit 1

View File

@ -1,43 +0,0 @@
# musrfit - cpack
include(CPackComponent)
set (CPACK_PACKAGE_NAME "musrfit-root6")
set (CPACK_PACKAGE_VENDOR "Paul Scherrer Institute - LMU - LEM")
set (CPACK_PACKAGE_DIRECTOR "@CMAKE_CURRENT_BINARY_DIR@/pack")
set (CPACK_PACKAGE_VERSION_MAJOR "@PROJECT_VERSION_MAJOR@")
set (CPACK_PACKAGE_VERSION_MINOR "@PROJECT_VERSION_MINOR@")
set (CPACK_PACKAGE_VERSION_PATCH "@PROJECT_VERSION_PATCH@")
set (CPACK_PACKAGE_CONTACT "<andreas.suter@psi.ch>")
set (CPACK_PACKAGE_DESCRIPTION_FILE "@PROJECT_SOURCE_DIR@/README.md")
set (CPACK_PACKAGE_DESCRIPTION_SUMMARY "musrfit - muSR data analysis package")
set (CPACK_PACKAGE_HOMEPAGE_URL "http://lmu.web.psi.ch/musrfit/user/html/index.html")
set (CPACK_PACKAGE_CHECKSUM "MD5")
set (CPACK_RESOURCE_FILE_LICENSE "@PROJECT_SOURCE_DIR@/COPYING")
set (CPACK_RESOURCE_FILE_README "@PROJECT_SOURCE_DIR@/README.md")
set (CPACK_RESOURCE_FILE_WELCOME "@PROJECT_SOURCE_DIR@/cmake/welcome.txt")
set (CPACK_RPM_EXCLUDE_FROM_AUTO_FILELIST_ADDITION "@CMAKE_INSTALL_PREFIX@;@CMAKE_INSTALL_PREFIX@/bin;@CMAKE_INSTALL_PREFIX@/include;@CMAKE_INSTALL_PREFIX@/share;@CMAKE_INSTALL_PREFIX@/lib64;@CMAKE_INSTALL_PREFIX@/lib;@CMAKE_INSTALL_PREFIX@/pkgconfig")
# we do not have any absolute paths, so do not need DESTDIR
set (CPACK_SET_DESTDIR "OFF")
set (CPACK_PACKAGE_RELOCATABLE "true")
if (${CPACK_GENERATOR} STREQUAL "RPM")
set (CPACK_RPM_PACKAGE_REQUIRES "root >= 6.22.00")
set (CPACK_INSTALL_PREFIX "@CMAKE_INSTALL_PREFIX@")
set (CPACK_PACKAGING_INSTALL_PREFIX "@CMAKE_INSTALL_PREFIX@")
set (CPACK_RPM_FILE_NAME "RPM-DEFAULT")
set (CPACK_RPM_PACKAGE_RELEASE "1")
# next variable for RHEL, CentOS, Fedora
set (CPACK_RPM_PACKAGE_RELEASE_DIST "el8")
set (CPACK_RPM_PACKAGE_LICENSE "GPLv2")
set (CPACK_RPM_PACKAGE_VENDOR "Paul Scherrer Institute - LMU - LEM")
set (CPACK_RPM_CHANGELOG_FILE "@PROJECT_SOURCE_DIR@/cmake/ChangeLogRPM")
set (CPACK_RPM_POST_INSTALL_SCRIPT_FILE "@PROJECT_SOURCE_DIR@/cmake/post_install.sh")
set (CPACK_RPM_POST_UNINSTALL_SCRIPT_FILE "@PROJECT_SOURCE_DIR@/cmake/post_uninstall.sh")
endif ()
if (${CPACK_GENERATOR} STREQUAL "DEB")
# to be populated yet
endif ()

View File

@ -1,4 +0,0 @@
* Mon Mar 11 2019 Andreas Suter <andreas.suter@psi.ch> - 1.4.2-2
- minor version update
* Mon Jan 14 2019 Andreas Suter <andreas.suter@psi.ch> - 1.4.0-1
- first cpack/cmake version

View File

@ -1,220 +0,0 @@
# - Find fftw3 library
# Find the native FFTW3 includes and library
# This module defines
# FFTW3_INCLUDE, where to find fftw3.h, etc.
# ---
# FFTW3_LIBRARY, library to link against to use FFTW3
# FFTW3_OMP_LIBRARY, library to link against to use FFTW3_omp
# FFTW3_THREADS_LIBRARY, library to link against to use FFTW3_threads
# FFTW3_FOUND, if false, do not try to use FFTW3.
# FFTW3_OMP_FOUND, if false, do not try to use OpenMP FFTW3.
# FFTW3_THREADS_FOUND, if false, do not try to use threaded FFTW3.
# ---
# FFTW3L_LIBRARY, library to link against to use FFTW3l
# FFTW3L_OMP_LIBRARY, library to link against to use FFTW3l_omp
# FFTW3L_THREADS_LIBRARY, library to link against to use FFTW3l_threads
# FFTW3L_FOUND, if false, do not try to use FFTW3l.
# FFTW3L_OMP_FOUND, if false, do not try to use OpenMP FFTW3l.
# FFTW3L_THREADS_FOUND, if false, do not try to use threaded FFTW3l.
# ---
# FFTW3F_LIBRARY, library to link against to use FFTW3f
# FFTW3F_OMP_LIBRARY, library to link against to use FFTW3f_omp
# FFTW3F_THREADS_LIBRARY, library to link against to use FFTW3f_threads
# FFTW3F_FOUND, if false, do not try to use FFTW3f.
# FFTW3F_OMP_FOUND, if false, do not try to use OpenMP FFTW3f.
# FFTW3F_THREADS_FOUND, if false, do not try to use threaded FFTW3f.
# ---
# FFTW3Q_LIBRARY, library to link against to use FFTW3q
# FFTW3Q_OMP_LIBRARY, library to link against to use FFTW3q_omp
# FFTW3Q_THREADS_LIBRARY, library to link against to use FFTW3q_threads
# FFTW3Q_FOUND, if false, do not try to use FFTW3q.
# FFTW3Q_OMP_FOUND, if false, do not try to use OpenMP FFTW3q.
# FFTW3Q_THREADS_FOUND, if false, do not try to use threaded FFTW3q.
function(add_imported_library lib_name library headers)
add_library(FFTW3::${lib_name} UNKNOWN IMPORTED)
set_target_properties(FFTW3::${lib_name} PROPERTIES
IMPORTED_LOCATION ${library}
INTERFACE_INCLUDE_DIRECTORIES ${headers}
)
set(${lib_name}_FOUND 1 CACHE INTERNAL "FFTW3 ${lib_name} found" FORCE)
set(${lib_name}_LIBRARY ${library}
CACHE STRING "Path to FFTW3::${lib_name} library" FORCE)
set(FFTW3_INCLUDE ${headers}
CACHE STRING "Path to FFTW3 headers" FORCE)
mark_as_advanced(FORCE ${lib_name}_LIBRARY)
mark_as_advanced(FORCE FFTW3_INCLUDE)
endfunction()
#as35 if (FFTW3_LIBRARY AND FFTW3_INCLUDE)
#as35 add_imported_library(${FFTW3_LIBRARY} ${FFTW3_INCLUDE})
#as35 if (FFTW3_OMP_LIBRARY AND FFTW3_INCLUDE)
#as35 add_imported_library(${FFTW3_OMP_LIBRARY} ${FFTW3_INCLUDE})
#as35 elseif (FFTW3_THREAD_LIBRARY AND FFTW3_INCLUDE)
#as35 add_imported_library(${FFTW3_THRED_LIBRARY} ${FFTW3_INCLUDE})
#as35 elseif (FFTW3L_LIBRARY AND FFTW3_INCLUDE)
#as35 add_imported_library(${FFTW3L_LIBRARY} ${FFTW3_INCLUDE})
#as35 elseif (FFTW3L_OMP_LIBRARY AND FFTW3_INCLUDE)
#as35 add_imported_library(${FFTW3L_OMP_LIBRARY} ${FFTW3_INCLUDE})
#as35 elseif (FFTW3L_THREAD_LIBRARY AND FFTW3_INCLUDE)
#as35 add_imported_library(${FFTW3L_THRED_LIBRARY} ${FFTW3_INCLUDE})
#as35 elseif (FFTW3F_LIBRARY AND FFTW3_INCLUDE)
#as35 add_imported_library(${FFTW3F_LIBRARY} ${FFTW3_INCLUDE})
#as35 elseif (FFTW3F_OMP_LIBRARY AND FFTW3_INCLUDE)
#as35 add_imported_library(${FFTW3F_OMP_LIBRARY} ${FFTW3_INCLUDE})
#as35 elseif (FFTW3F_THREAD_LIBRARY AND FFTW3_INCLUDE)
#as35 add_imported_library(${FFTW3F_THRED_LIBRARY} ${FFTW3_INCLUDE})
#as35 elseif (FFTW3Q_LIBRARY AND FFTW3_INCLUDE)
#as35 add_imported_library(${FFTW3Q_LIBRARY} ${FFTW3_INCLUDE})
#as35 elseif (FFTW3Q_OMP_LIBRARY AND FFTW3_INCLUDE)
#as35 add_imported_library(${FFTW3Q_OMP_LIBRARY} ${FFTW3_INCLUDE})
#as35 elseif (FFTW3Q_THREAD_LIBRARY AND FFTW3_INCLUDE)
#as35 add_imported_library(${FFTW3Q_THRED_LIBRARY} ${FFTW3_INCLUDE})
#as35 endif()
#as35 return()
#as35 endif()
find_path(FFTW3_INCLUDE NAMES fftw3.h
HINTS "/usr/include" "/opt/local/include" "/app/include"
)
find_library(FFTW3_LIBRARY fftw3)
find_library(FFTW3_OMP_LIBRARY fftw3_omp)
find_library(FFTW3_THREAD_LIBRARY fftw3_threads)
find_library(FFTW3L_LIBRARY fftw3l)
find_library(FFTW3L_OMP_LIBRARY fftw3l_omp)
find_library(FFTW3L_THREAD_LIBRARY fftw3l_threads)
find_library(FFTW3F_LIBRARY fftw3f)
find_library(FFTW3F_OMP_LIBRARY fftw3f_omp)
find_library(FFTW3F_THREAD_LIBRARY fftw3f_threads)
find_library(FFTW3Q_LIBRARY fftw3q)
find_library(FFTW3Q_OMP_LIBRARY fftw3q_omp)
find_library(FFTW3Q_THREAD_LIBRARY fftw3q_threads)
# handle the QUIETLY and REQUIRED arguments and set FFTW3_FOUND to TRUE if
# all listed variables are TRUE
include(${CMAKE_ROOT}/Modules/FindPackageHandleStandardArgs.cmake)
# FFTW3
find_package_handle_standard_args(FFTW3
DEFAULT_MSG FFTW3_LIBRARY FFTW3_INCLUDE
)
if (FFTW3_FOUND)
add_imported_library("FFTW3" "${FFTW3_LIBRARY}" "${FFTW3_INCLUDE}")
endif()
# FFTW3_OMP
find_package_handle_standard_args(FFTW3_OMP
REQUIRED_VARS FFTW3_OMP_LIBRARY FFTW3_INCLUDE
HANDLE_COMPONENTS
NAME_MISMATCHED
)
if (FFTW3_OMP_FOUND)
add_imported_library("FFTW3_OMP" "${FFTW3_OMP_LIBRARY}" "${FFTW3_INCLUDE}")
endif()
# FFTW3_THREAD
find_package_handle_standard_args(FFTW3_THREAD
REQUIRED_VARS FFTW3_THREAD_LIBRARY FFTW3_INCLUDE
HANDLE_COMPONENTS
NAME_MISMATCHED
)
if (FFTW3_THREAD_FOUND)
add_imported_library("FFTW3_THREAD" "${FFTW3_THREAD_LIBRARY}" "${FFTW3_INCLUDE}")
endif()
# FFTW3L
find_package_handle_standard_args(FFTW3L
REQUIRED_VARS FFTW3L_LIBRARY FFTW3_INCLUDE
HANDLE_COMPONENTS
NAME_MISMATCHED
)
if (FFTW3L_FOUND)
add_imported_library("FFTW3L" "${FFTW3L_LIBRARY}" "${FFTW3_INCLUDE}")
endif()
# FFTW3L_OMP
find_package_handle_standard_args(FFTW3L_OMP
REQUIRED_VARS FFTW3L_OMP_LIBRARY FFTW3_INCLUDE
HANDLE_COMPONENTS
NAME_MISMATCHED
)
if (FFTW3L_OMP_FOUND)
add_imported_library("FFTW3L_OMP" "${FFTW3L_OMP_LIBRARY}" "${FFTW3_INCLUDE}")
endif()
# FFTW3L_THREAD
find_package_handle_standard_args(FFTW3L_THREAD
REQUIRED_VARS FFTW3L_THREAD_LIBRARY FFTW3_INCLUDE
HANDLE_COMPONENTS
NAME_MISMATCHED
)
if (FFTW3L_THREAD_FOUND)
add_imported_library("FFTW3L_THREAD" "${FFTW3L_THREAD_LIBRARY}" "${FFTW3_INCLUDE}")
endif()
# FFTW3F
find_package_handle_standard_args(FFTW3F
REQUIRED_VARS FFTW3F_LIBRARY FFTW3_INCLUDE
HANDLE_COMPONENTS
NAME_MISMATCHED
)
if (FFTW3F_FOUND)
add_imported_library("FFTW3F" "${FFTW3F_LIBRARY}" "${FFTW3_INCLUDE}")
endif()
# FFTW3F_OMP
find_package_handle_standard_args(FFTW3F_OMP
REQUIRED_VARS FFTW3F_OMP_LIBRARY FFTW3_INCLUDE
HANDLE_COMPONENTS
NAME_MISMATCHED
)
if (FFTW3F_OMP_FOUND)
add_imported_library("FFTW3F_OMP" "${FFTW3F_OMP_LIBRARY}" "${FFTW3_INCLUDE}")
endif()
# FFTW3F_THREAD
find_package_handle_standard_args(FFTW3F_THREAD
REQUIRED_VARS FFTW3F_THREAD_LIBRARY FFTW3_INCLUDE
HANDLE_COMPONENTS
NAME_MISMATCHED
)
if (FFTW3F_THREAD_FOUND)
add_imported_library("FFTW3F_THREAD" "${FFTW3F_THREAD_LIBRARY}" "${FFTW3_INCLUDE}")
endif()
# FFTW3Q
find_package_handle_standard_args(FFTW3Q
REQUIRED_VARS FFTW3Q_LIBRARY FFTW3_INCLUDE
HANDLE_COMPONENTS
NAME_MISMATCHED
)
if (FFTW3Q_FOUND)
add_imported_library("FFTW3Q" "${FFTW3Q_LIBRARY}" "${FFTW3_INCLUDE}")
endif()
# FFTW3Q_OMP
find_package_handle_standard_args(FFTW3Q_OMP
REQUIRED_VARS FFTW3Q_OMP_LIBRARY FFTW3_INCLUDE
HANDLE_COMPONENTS
NAME_MISMATCHED
)
if (FFTW3Q_OMP_FOUND)
add_imported_library("FFTW3Q_OMP" "${FFTW3Q_OMP_LIBRARY}" "${FFTW3_INCLUDE}")
endif()
# FFTW3Q_THREAD
find_package_handle_standard_args(FFTW3Q_THREAD
REQUIRED_VARS FFTW3Q_THREAD_LIBRARY FFTW3_INCLUDE
HANDLE_COMPONENTS
NAME_MISMATCHED
)
if (FFTW3Q_THREAD_FOUND)
add_imported_library("FFTW3Q_THREAD" "${FFTW3Q_THREAD_LIBRARY}" "${FFTW3_INCLUDE}")
endif()
pkg_check_modules(FFTW fftw3 QUIET)
if (FFTW3_FOUND)
message("-- Found FFTW3: ${FFTW3_INCLUDE}, Version: ${FFTW_VERSION}")
endif (FFTW3_FOUND)

View File

@ -1,97 +0,0 @@
## Process this file with cmake
#=============================================================================
# NeXus - Neutron & X-ray Common Data Format
#
# CMakeLists for building the NeXus library and applications.
#
# Copyright (C) 2011 Stephen Rankin
#
# This library is free software; you can redistribute it and/or modify it
# under the terms of the GNU Lesser General Public License as published by the
# Free Software Foundation; either version 2 of the License, or (at your
# option) any later version.
#
# This library is distributed in the hope that it will be useful, but WITHOUT
# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
# FITNESS FOR A PARTICULAR PURPOSE. See the GNU Lesser General Public License
# for more details.
#
# You should have received a copy of the GNU Lesser General Public License
# along with this library; if not, write to the Free Software Foundation,
# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
#
# For further information, see <http://www.nexusformat.org>
#
#
#=============================================================================
#------------------------------------------------------------------------------
# find the runtime binaries of the HDF4 library
#------------------------------------------------------------------------------
find_library(HDF4_DF_LIBRARY NAMES df hdf
HINTS ENV HDF4_ROOT
PATH_SUFFIXES hdf)
if(HDF4_DF_LIBRARY MATCHES HDF4_DF_LIBRARY-NOTFOUND)
message(FATAL_ERROR "Could not find HDF4 DF library!")
else()
get_filename_component(HDF4_LIBRARY_DIRS ${HDF4_DF_LIBRARY} PATH)
message(STATUS "Found HDF4 DF library: ${HDF4_DF_LIBRARY}")
message(STATUS "HDF4 libary path: ${HDF4_LIBRARY_DIRS}")
endif()
find_library(HDF4_MFHDF_LIBRARY NAMES mfhdf
HINTS ENV HDF4_ROOT
PATH_SUFFIXES hdf)
if(HDF4_MFHDF_LIBRARY MATCHES HDF4_MFHDF_LIBRARY-NOTFOUND)
message(FATAL_ERROR "Could not find HDF5 MFHDF library!")
else()
message(STATUS "Found HDF4 MFHDF library: ${HDF4_MFHDF_LIBRARY}")
endif()
#------------------------------------------------------------------------------
# find the HDF4 header file
#------------------------------------------------------------------------------
find_path(HDF4_INCLUDE_DIRS mfhdf.h
HINTS ENV HDF4_ROOT
PATH_SUFFIXES hdf)
if(HDF4_INCLUDE_DIRS MATCHES HDF4_INCLUDE_DIRS-NOTFOUND)
message(FATAL_ERROR "Could not find HDF4 header files")
else()
message(STATUS "Found HDF4 header files in: ${HDF4_INCLUDE_DIRS}")
endif()
#------------------------------------------------------------------------------
# search for additional packages required to link against HDF4
#------------------------------------------------------------------------------
find_package(JPEG REQUIRED)
#------------------------------------------------------------------------------
# add libraries to the link list for NAPI
#------------------------------------------------------------------------------
get_filename_component(LIB_EXT ${HDF4_DF_LIBRARY} EXT)
if(LIB_EXT MATCHES .a)
message(STATUS "HDF4 DF library is static")
list(APPEND NAPI_LINK_LIBS "-Wl,-whole-archive" ${HDF4_DF_LIBRARY} "-Wl,-no-whole-archive")
else()
list(APPEND NAPI_LINK_LIBS ${HDF4_DF_LIBRARY})
endif()
get_filename_component(LIB_EXT ${HDF4_MFHDF_LIBRARY} EXT)
if(LIB_EXT MATCHES .a)
message(STATUS "HDF4 MFHDF library is static")
list(APPEND NAPI_LINK_LIBS "-Wl,-whole-archive" ${HDF4_MFHDF_LIBRARY} "-Wl,-no-whole-archive")
else()
list(APPEND NAPI_LINK_LIBS ${HDF4_MFHDF_LIBRARY})
endif()
list(APPEND NAPI_LINK_LIBS jpeg)
include_directories ( SYSTEM ${HDF4_INCLUDE_DIRS} )
link_directories(${HDF4_LIBRARY_DIRS})

View File

@ -1,34 +0,0 @@
# - find MXML
# find the MXML lib and includes
# This module defines
# LIBMXML_INCLUDE_DIR, where to find mxml.h
# LIBMXML_LIBRARY, library to link against
# LIBMXML_FOUND, if false, do not try to use the MXML lib
find_path(LIBMXML_INCLUDE_DIR mxml.h
HINT "/usr/include"
)
# find position of mxml.h from the end
string(FIND "${LIBMXML_INCLUDE_DIR}" "/mxml.h" pos REVERSE)
# truncate the string
string(SUBSTRING "${LIBMXML_INCLUDE_DIR}" 0 ${pos} substr)
set(LIBMXML_INCLUDE_DIR ${substr})
unset(substr)
find_library(LIBMXML_LIBRARY mxml)
# get version string
# currently do not know from where to get it automatically
# handle the QUIETLY and REQUIRED arguments and set LIBMXML_FOUND to TRUE if
# all listed variables are TRUE
include(${CMAKE_ROOT}/Modules/FindPackageHandleStandardArgs.cmake)
FIND_PACKAGE_HANDLE_STANDARD_ARGS(MXML
REQUIRED_VARS LIBMXML_LIBRARY LIBMXML_INCLUDE_DIR)
if (NOT LIBMXML_FOUND)
unset(LIBMXML_LIBRARY)
endif()
mark_as_advanced(LIBMXML_INCLUDE_DIR LIBMXML_LIBRARY)

View File

@ -1,45 +0,0 @@
# - Find NeXus library
# Find the native NEXUS includes and library
# This module defines
# NEXUS_INCLUDE_DIR, where to find NeXus.h, etc.
# NEXUS_LIBRARY, library to link against to use NEXUS
# NEXUS_FOUND, if false, do not try to use NEXUS.
find_path(NEXUS_INCLUDE_DIR napi.h
HINTS "/usr/local/include" "/opt/nexus/include" "/usr/local/include/nexus"
)
# find position of napi.h from the end
string(FIND "${NEXUS_INCLUDE_DIR}" "/napi.h" pos REVERSE)
# truncate the string
string(SUBSTRING "${NEXUS_INCLUDE_DIR}" 0 ${pos} substr)
set(NEXUS_INCLUDE_DIR ${substr})
unset(substr)
find_library(NEXUS_LIBRARY NeXus
HINTS "/usr/lib" "/usr/lib64" "/usr/local/lib" "/usr/local/lib64" "/opt/nexus/lib")
# get version string
if (NEXUS_INCLUDE_DIR AND EXISTS ${NEXUS_INCLUDE_DIR}/napi.h)
file(STRINGS "${NEXUS_INCLUDE_DIR}/napi.h" NEXUS_version_str
REGEX "^#define[\t ]+NEXUS_VERSION[\t ].*")
string(REGEX REPLACE "^#define[\t ]+NEXUS_VERSION[\t ]+\"([^\"]*).*"
"\\1" NEXUS_VERSION_STRING "${NEXUS_version_str}")
unset(NEXUS_version_str)
endif()
# handle the QUIETLY and REQUIRED arguments and set NEXUS_FOUND to TRUE if
# all listed variables are TRUE
include(${CMAKE_ROOT}/Modules/FindPackageHandleStandardArgs.cmake)
FIND_PACKAGE_HANDLE_STANDARD_ARGS(NEXUS
REQUIRED_VARS NEXUS_LIBRARY NEXUS_INCLUDE_DIR
VERSION_VAR NEXUS_VERSION_STRING)
if (NOT NEXUS_FOUND)
unset(NEXUS_LIBRARY)
endif()
mark_as_advanced(NEXUS_INCLUDE_DIR NEXUS_LIBRARY)

View File

@ -1,69 +0,0 @@
// config.h
#define PACKAGE_VERSION "@PROJECT_VERSION@"
#define ROOT_VERSION_USED "@ROOT_VERSION@"
#define BUILD_TYPE "@CMAKE_BUILD_TYPE@"
// define to 1 if minor ROOT6 version is >= 24
#define ROOT_GRTEQ_24 @ROOT_GRTEQ_24@
// define to 1 if you have <alloca.h> and it should be used
#cmakedefine HAVE_ALLOCA_H 1
// Define to 1 if you have the <dlfcn.h> header file.
#cmakedefine HAVE_DLFCN_H 1
// Define to 1 if you have the `erf' function.
#cmakedefine HAVE_ERF 1
// Define to 1 if you have the `getloadavg' function.
#cmakedefine HAVE_GETLOADAVG 1
// Define to 1 if gomp is available */
#cmakedefine HAVE_GOMP 1
// Define to 1 if you have the <inttypes.h> header file.
#cmakedefine HAVE_INTTYPES_H 1
// Define to 1 if the type `long double' works and has more range or precision than `double'.
#cmakedefine HAVE_LONG_DOUBLE 1
// Define to 1 if the type `long double' works and has more range or precision than `double'.
#cmakedefine HAVE_LONG_DOUBLE_WIDER 1
// Define to 1 if fftw3f_threads are available
#cmakedefine HAVE_LIBFFTW3F_THREADS 1
// Define to 1 if fftw3_threads are available
#cmakedefine HAVE_LIBFFTW3_THREADS 1
// Define to 1 if you have the <memory.h> header file.
#cmakedefine HAVE_MEMORY_H 1
// Define to 1 if you have the `powl' function.
#cmakedefine HAVE_POWL 1
// Define to 1 if you have the `shmget' function.
#cmakedefine HAVE_SHMGET 1
// Define to 1 if you have the <stdint.h> header file.
#cmakedefine HAVE_STDINT_H 1
// Define to 1 if you have the <stdlib.h> header file.
#cmakedefine HAVE_STDLIB_H 1
// Define to 1 if you have the <string.h> header file.
#cmakedefine HAVE_STRING_H 1
// Define to 1 if you have the <strings.h> header file.
#cmakedefine HAVE_STRINGS_H 1
// Define to 1 if you have the <sys/stat.h> header file.
#cmakedefine HAVE_SYS_STAT_H 1
// Define to 1 if you have the <sys/types.h> header file.
#cmakedefine HAVE_SYS_TYPES_H 1
// Define to 1 if you have the <unistd.h> header file.
#cmakedefine HAVE_UNISTD_H 1

View File

@ -1,30 +0,0 @@
# configure_musrfit_version_file.cmake.in:
set(SRC_DIR "@CMAKE_SOURCE_DIR@")
set(BIN_DIR "@CMAKE_CURRENT_BINARY_DIR@")
# Set variables
set(CMAKE_INSTALL_PREFIX "@CMAKE_INSTALL_PREFIX@")
set(MUSRFIT_VERSION "@MUSRFIT_VERSION@")
# Get the current working branch
execute_process(
COMMAND git rev-parse --abbrev-ref HEAD
WORKING_DIRECTORY ${CMAKE_SOURCE_DIR}
OUTPUT_VARIABLE GIT_BRANCH
OUTPUT_STRIP_TRAILING_WHITESPACE
)
# Get the latest abbreviated commit hash of the working branch
execute_process(
COMMAND git log -1 --pretty="%h, %ci"
WORKING_DIRECTORY ${CMAKE_SOURCE_DIR}
OUTPUT_VARIABLE GIT_CURRENT_SHA1
OUTPUT_STRIP_TRAILING_WHITESPACE
)
configure_file(
${SRC_DIR}/cmake/git-revision.h.in
${BIN_DIR}/git-revision.h
@ONLY
)
# EOF

View File

@ -1,8 +0,0 @@
#ifndef GIT_VERSION_H
#define GIT_VERSION_H
#define GIT_BRANCH "@GIT_BRANCH@"
#define GIT_CURRENT_SHA1 @GIT_CURRENT_SHA1@
#endif // GIT_VERSION_H

View File

@ -1,4 +0,0 @@
//--- This file is generated by cmake -----------------------------------------
#define MUSRFIT_PREFIX "@CMAKE_INSTALL_PREFIX@"
#define MUSRFIT_DOC_DIR "@CMAKE_INSTALL_PREFIX@/share/doc/musrfit"

View File

@ -1,101 +0,0 @@
Name: musrfit-root6
Version: 1.4
Release: 1%{?dist}
Summary: musrfit - muSR data analysis package
License: GPLv2
URL: http://lmu.web.psi.ch/musrfit/user/html/index.html
Source0: https://gitlab.psi.ch/nemu/musrfit/repository/%{name}-%{version}.tar.gz
BuildRequires: cmake
BuildRequires: libtool
BuildRequires: gcc
BuildRequires: make
BuildRequires: hdf-devel hdf5-devel
BuildRequires: mxml-devel
BuildRequires: fftw3-devel
BuildRequires: boost-devel
BuildRequires: gsl-devel
BuildRequires: libxml2-devel
BuildRequires: root
BuildRequires: root-io-xml
BuildRequires: root-mathmore
BuildRequires: root-minuit2
BuildRequires: qt5-qtbase-devel qt5-qtsvg-devel qt5-qtwebkit-devel
BuildRequires: nexus
Requires: hdf hdf5
Requires: mxml
Requires: fftw3
Requires: gsl
Requires: boost-devel
Requires: libxml2
Requires: root
Requires: root-io-xml
Requires: root-mathmore
Requires: root-minuit2
Requires: qt5-qtbase qt5-qtsvg qt5-qtwebkit
Requires: nexus
%description
This is a data analysis package to analyze time differential muSR and beta-NMR data. Currently it allows the following things:
- setting up most commonly used fitting functions for muSR and beta-NMR
- fitting data, including global fits
- showing the fit results and the residuals
- showing the Fourier transform of the data
- extracting easily the fitting parameters to be used in other programs (gnuplot, qtiplot/origin, ...)
- allows to generate fitting input files for follow-up runs
- allows to generate global fitting input files based on a single run template
- allows to implement more sophisticated user functions (e.g. GL vortex lattice, Meissner screening including low-energy muon stopping profiles)
Currently supported platforms:
- Linux
- Mac OS X
- Windows - not really, only for the very brave ones
%prep
%setup -q -n %{name}-%{version}
%build
##æs35 ./autogen.sh
# DOCDIR is needed to be set here. BMWlibs still makes troubles
%cmake -DASlibs=1 -DBMWlbis=1 -Dnexus=1 DOCDIR=$RPM_BUILD_ROOT/usr/share/doc/musrfit
%cmake --build ./ --clean-first -- -j8
##æs35 %configure --enable-ASlibs --enable-BMWlibs --enable-NeXus DOCDIR=$RPM_BUILD_ROOT/usr/share/doc/musrfit
##æs35 %make_build
%install
# INSTALL_ROOT is needed for Qt applications
rm -rf $RPM_BUILD_ROOT
%make_install INSTALL_ROOT=%{buildroot}
%files
%_prefix/bin/any2many
%_prefix/bin/dump_header
%_prefix/bin/msr2data
%_prefix/bin/msr2msr
%_prefix/bin/mupp
%_prefix/bin/mupp_plot
%_prefix/bin/musredit
%_prefix/bin/musrfit
%_prefix/bin/musrFT
%_prefix/bin/musrRootValidation
%_prefix/bin/musrStep
%_prefix/bin/musrt0
%_prefix/bin/musrview
%_prefix/bin/musrWiz
%_prefix/bin/write_musrRoot_runHeader
%_prefix/include/*
%_prefix/lib64/*
%license COPYING
%doc %_prefix/share/doc/musrfit
%changelog
* Thu Dec 20 2018 Andreas Suter <andreas.suter@psi.ch> - 1.4-1
- adopted to cmake
* Wed Oct 25 2017 Andreas Suter <andreas.suter@psi.ch> - 1.2-1
- first spec file for musrfit-root6

View File

@ -1,12 +0,0 @@
#!/bin/bash
echo " >> musrfit post install script started ..."
# test if nemu-x86_64.conf does not exist
if [ ! -f "/etc/ld.so.conf.d/nemu-x86_64.conf" ]
then
echo "/usr/local/lib" >> /etc/ld.so.conf.d/nemu-x86_64.conf
echo "/usr/local/lib64" >> /etc/ld.so.conf.d/nemu-x86_64.conf
fi
/sbin/ldconfig

View File

@ -1,5 +0,0 @@
#!/bin/bash
echo " >> musrfit post uninstall script started ..."
/sbin/ldconfig

View File

@ -1 +0,0 @@
Welcome to the musrfit package

1602
configure.ac Normal file

File diff suppressed because it is too large Load Diff

BIN
doc/.DS_Store vendored

Binary file not shown.

BIN
doc/examples/.DS_Store vendored

Binary file not shown.

Binary file not shown.

View File

@ -1,14 +1,13 @@
<?xml version="1.0" encoding="UTF-8"?>
<nonlocal xmlns="http://nemu.web.psi.ch/musrfit/nonlocal">
<comment>
nonlocal_startup.xml
$Id: nonlocal_startup.xml 4047 2009-07-02 13:36:18Z nemu $
</comment>
<nonlocal_par>
<fourier_points>262144</fourier_points>
</nonlocal_par>
<trim_sp>
<data_path>./profiles/</data_path>
<rge_fln_pre>Sn_E</rge_fln_pre>
<trim_sp_part>
<data_path>profiles/Sn_E</data_path>
<energy_list>
<energy>1000</energy>
<energy>2000</energy>
@ -23,5 +22,5 @@
<energy>25000</energy>
<energy>27300</energy>
</energy_list>
</trim_sp>
</trim_sp_part>
</nonlocal>

View File

@ -4,21 +4,21 @@ FITPARAMETER
# Nr. Name Value Step Pos_Error Boundaries
1 one 1 0 none
2 zero 0 0 none
3 Asy 0.2235 -0.0065 0.0072 0 0.33
4 energy 22000 0 none
3 Asy 0.2235 -0.0066 0.0072 0 0.33
4 energy 22 0 none
5 redTemp 0.8683 0 none
6 thickness 5000 0 none
7 ell 12000 0 none
8 xi 94 0 none
9 lambdaL 52.5 -1.3 1.2
9 lambdaL 52.5 -1.4 1.2
10 Bext 47.11 0 none
11 deadLayer 0.0004 0.0037 none 0 none
11 deadLayer 0.00052 -0.00052 6.89563 0 none
12 RateSmear 0.418 -0.015 0.015
13 N0_L 301.6 -1.1 1.2
14 Bkg_L 24.441 -0.092 0.092
13 N0_L 301.61 0.62 none
14 Bkg_L 24.442 0.076 none
15 Phase_L 42.0 -2.2 2.2
16 Alpha_LR 1.0613 -0.0066 0.0064
17 Bkg_R 27.646 -0.089 0.090
16 Alpha_LR 1.0614 -0.0066 0.0064
17 Bkg_R 27.646 -0.090 0.090
18 RelPhase_R 154.4 -1.1 1.1
###############################################################
@ -37,6 +37,7 @@ RUN data/lem10_his_0825 MUE4 PSI ROOT-NPP (name beamline institute data-file-f
fittype 0 (single histogram fit)
norm 13
backgr.fit 14
lifetimecorrection
map 1 2 0 0 0 0 0 0 0 0
forward 1
data 3289 65000
@ -48,6 +49,7 @@ RUN data/lem10_his_0825 MUE4 PSI ROOT-NPP (name beamline institute data-file-f
fittype 0 (single histogram fit)
norm fun1
backgr.fit 17
lifetimecorrection
map 16 18 0 0 0 0 0 0 0 0
forward 3
data 3289 65000
@ -67,27 +69,23 @@ SAVE
###############################################################
PLOT 0 (single histo plot)
lifetimecorrection
runs 1 2
range 0 9 -0.3 0.3
view_packing 500
###############################################################
FOURIER
units Gauss # units either 'Gauss', 'Tesla', 'MHz', or 'Mc/s'
units Gauss # units either 'Gauss', 'MHz', or 'Mc/s'
fourier_power 10
apodization STRONG # NONE, WEAK, MEDIUM, STRONG
plot POWER # REAL, IMAG, REAL_AND_IMAG, POWER, PHASE, PHASE_OPT_REAL
plot POWER # REAL, IMAG, REAL_AND_IMAG, POWER, PHASE
phase 8.5
#range_for_phase_correction 50.0 70.0
range 0 200
range 0.0 200.0
###############################################################
STATISTIC --- 2021-03-30 15:04:30
maxLH = 415.6, NDF = 358, maxLH/NDF = 1.160942
expected maxLH = 418.1, NDF = 358, expected maxLH/NDF = 1.168011
run block 1: (NDF/red.maxLH/red.maxLH_e) = (177/1.072511/1.087460)
run block 2: (NDF/red.maxLH/red.maxLH_e) = (175/1.290186/1.289528)
STATISTIC --- 2014-11-05 12:34:54
maxLH = 415.6, NDF = 358, maxLH/NDF = 1.160933

View File

@ -2,23 +2,23 @@ LSCO x=0.195 single
###############################################################
FITPARAMETER
# No Name Value Step Pos_Error Boundaries
1 phase 10.34 0.21 none
2 field 112.82363 0.00033 none
3 lambda 170.4570 0.0022 none 1 none
1 phase 8.09 0.30 none
2 field 107.08786 0.00052 none
3 lambda 195.5703 0.0029 none 1 none
4 xi 4 0 none 0 10
5 asym1 0.19219 -0.00079 0.00079 0 0.3
6 rate1 0.7955 0.0043 none
5 asym1 0.1980 0.0011 none 0 0.3
6 rate1 0.7697 0.0063 none
7 asymBg 0 0 none 0 0.3
8 rateBg 0 0 none 0 none
9 N01 3313.6 1.2 none 0 none
10 bg1 68.54 0.21 none 0 none
11 N02 3575.9 1.2 none 0 none
12 bg2 69.82 0.22 none 0 none
13 relphase 181.46 0.29 none 150 210
9 N01 3311.3 1.7 none 0 none
10 bg1 68.70 0.30 none 0 none
11 N02 3577.8 1.7 none 0 none
12 bg2 69.62 0.31 none 0 none
13 relphase 181.63 0.41 none 150 210
14 zero 0 0 none
15 relasy 1.0365 0.0051 none
15 relasy 1.0325 0.0075 none
16 one 1 0 none
###############################################################
@ -38,52 +38,53 @@ fun2 = par1 + map1
fun3 = par5 * map2
fun4 = par7 * map2
###############################################################
GLOBAL
fittype 0 (single histogram fit)
fit 0 8
packing 30
###############################################################
RUN data/deltat_pta_gps_3093 PIM3 PSI PSI-BIN (name beamline institute data-file-format)
fittype 0 (single histogram fit)
map 14 16 0 0 0 0 0 0 0 0
forward 3
norm 9
lifetimecorrection
backgr.fit 10
t0 125.0
data 128 8001
fit 0 8
packing 30
RUN data/deltat_pta_gps_3093 PIM3 PSI PSI-BIN (name beamline institute data-file-format)
fittype 0 (single histogram fit)
map 13 15 0 0 0 0 0 0 0 0
forward 4
norm 11
lifetimecorrection
backgr.fit 12
t0 124.0
data 127 8000
fit 0 8
packing 30
###############################################################
COMMANDS
MAX_LIKELIHOOD
MINIMIZE
MINOS
#MIGRAD
HESSE
#MINOS
SAVE
###############################################################
FOURIER
units Gauss # units either 'Gauss', 'Tesla', 'MHz', or 'Mc/s'
units Gauss # units either 'Gauss', 'MHz', or 'Mc/s'
fourier_power 9
apodization NONE # NONE, WEAK, MEDIUM, STRONG
plot POWER # REAL, IMAG, REAL_AND_IMAG, POWER, PHASE, PHASE_OPT_REAL
plot POWER # REAL, IMAG, REAL_AND_IMAG, POWER, PHASE
phase par1
range 0 500
###############################################################
PLOT 0 (single histo plot)
lifetimecorrection
runs 1 2
range 0 4 -0.25 0.25
###############################################################
STATISTIC --- 2021-02-26 14:54:47
maxLH = 1497.5, NDF = 415, maxLH/NDF = 3.608471
STATISTIC --- 2013-05-03 09:08:20
chisq = 1200.8, NDF = 415, chisq/NDF = 2.893391

View File

@ -4,19 +4,19 @@ FITPARAMETER
# No Name Value Step Pos_Error Boundaries
1 field 94.717 0 none
2 deadlayer 10.5 0 none
3 lambda 115.98 -0.65 0.63
3 lambda 115.96 -0.92 0.88
# E = 22keV
4 phase22 25.4956 0 none
5 asym22 0.1047 -0.0021 0.0021 0 0.3
6 rate22 0.558 -0.023 0.023
7 NormL22 752.98 -0.61 0.61
8 BGL22 51.114 -0.094 0.094
9 NormR22 545.95 -0.54 0.54
10 BGR22 38.634 -0.082 0.082
11 relasyR22 1.068 -0.027 0.027 0.2 2
12 relphaR22 162.8 -1.1 1.1 110 210
5 asym22 0.1047 -0.0029 0.0030 0 0.3
6 rate22 0.559 -0.032 0.033
7 NormL22 753.00 -0.86 0.87
8 BGL22 51.08 -0.13 0.13
9 NormR22 545.93 -0.77 0.76
10 BGR22 38.60 -0.11 0.12
11 relasyR22 1.068 -0.038 0.039 0.2 2
12 relphaR22 162.8 -1.5 1.5 110 210
13 energy22 22 0 none
14 one 1 0 none
@ -35,48 +35,53 @@ fun2 = map1 + map5
fun3 = par1 * gamma_mu
###############################################################
GLOBAL
RUN data/lem09_his_0916 MUE4 PSI ROOT-NPP (name beamline institute data-file-format)
fittype 0 (single histogram fit)
norm 7
backgr.fit 8
lifetimecorrection
map 4 5 6 14 15 13 0 0 0 0
forward 1
background 65000 66500
data 3419 63000
t0 3419.0
fit 0.15 10
packing 150
RUN data/lem09_his_0916 MUE4 PSI ROOT-NPP (name beamline institute data-file-format)
fittype 0 (single histogram fit)
norm 9
backgr.fit 10
lifetimecorrection
map 4 5 6 11 12 13 0 0 0 0
forward 3
background 65000 66500
data 3419 63000
t0 3419.0
fit 0.15 10
packing 150
###############################################################
RUN data/lem09_his_0916 MUE4 PSI ROOT-NPP (name beamline institute data-file-format)
norm 7
backgr.fit 8
map 4 5 6 14 15 13 0 0 0 0
forward 1
RUN data/lem09_his_0916 MUE4 PSI ROOT-NPP (name beamline institute data-file-format)
norm 9
backgr.fit 10
map 4 5 6 11 12 13 0 0 0 0
forward 3
###############################################################
COMMANDS
MAX_LIKELIHOOD
#MAX_LIKELIHOOD
MINIMIZE
MINOS
SAVE
###############################################################
FOURIER
units Gauss # units either 'Gauss', 'Tesla', 'MHz', or 'Mc/s'
units Gauss # units either 'Gauss', 'MHz', or 'Mc/s'
fourier_power 10
apodization WEAK # NONE, WEAK, MEDIUM, STRONG
plot POWER # REAL, IMAG, REAL_AND_IMAG, POWER, PHASE, PHASE_OPT_REAL
plot POWER # REAL, IMAG, REAL_AND_IMAG, POWER, PHASE
phase par4
range 0 200
###############################################################
PLOT 0 (single histo plot)
lifetimecorrection
runs 1 2
runs 1 2
range 0 4 -0.25 0.25
###############################################################
STATISTIC --- 2021-02-26 14:50:08
maxLH = 695.5, NDF = 663, maxLH/NDF = 1.049008
STATISTIC --- 2013-11-12 10:25:11
chisq = 696.9, NDF = 663, chisq/NDF = 1.051076

View File

@ -1,53 +0,0 @@
LaAlO3, SLR, 30G, 150K, Bias=23 kV, Ix=0A, Iy=+3A, aligned, beam on=1s
###############################################################
FITPARAMETER
###############################################################
# No Name Value Err Min Max
1 Alpha 1 0 none
2 Asy 0.05992 0.00063 none 0 0.2
3 T 1 0 none
4 Rlx 1.143 0.023 none 0 100
###############################################################
THEORY
###############################################################
asymmetry 2
userFcn libBNMR ExpRlx 3 4
###############################################################
RUN 045674 BNMR TRIUMF MUD (name beamline institute data-file-format)
fittype 5 (beta-NMR fit)
alpha 1
forward 3 5
backward 4 6
data 11 910 11 910
background 1 9 1 9 # estimated bkg: 8.0000 / 9.6250
t0 10.0 10.0 10.0 10.0
map 0 0 0 0 0 0 0 0 0 0
fit 0.2 9
packing 5
###############################################################
COMMANDS
MINIMIZE
HESSE
SAVE
###############################################################
PLOT 5 (beta-NMR asymmetry plot)
runs 1
use_fit_ranges
view_packing 10
###############################################################
FOURIER
units MHz # units either 'Gauss', 'Tesla', 'MHz', or 'Mc/s'
fourier_power 12
apodization STRONG # NONE, WEAK, MEDIUM, STRONG
plot POWER # REAL, IMAG, REAL_AND_IMAG, POWER, PHASE, PHASE_OPT_REAL
phase 8
#range FRQMIN FRQMAX
###############################################################
STATISTIC --- 2019-05-03 17:06:29
chisq = 419.1, NDF = 173, chisq/NDF = 2.422357

View File

@ -1,73 +0,0 @@
LaAlO3, SLR, 30G, 150K, Bias=23 kV, Ix=0A, Iy=+3A, aligned, beam on=1s
###############################################################
FITPARAMETER
###############################################################
# No Name Value Err Min Max
1 Alpha 1.11589 0.00037 none
2 Asy 0.1121 0.0094 none 0 0.2
3 T 1 0 none
4 Rlx 4.12 0.87 none 0 15000
5 Beta 0.434 0.031 none 0.3 2
6 One 1 0 none
7 FlHel -1.048 0.023 none -2 0
###############################################################
THEORY
###############################################################
asymmetry fun1
userFcn libBNMR SExpRlx 3 4 5
###############################################################
FUNCTIONS
###############################################################
fun1 = 0.5 * map1 * map2
###############################################################
RUN 045674 BNMR TRIUMF MUD (name beamline institute data-file-format)
fittype 2 (asymmetry fit)
alpha 1
forward 3
backward 4
data 11 1000 11 1000
background 1 9 1 9 # estimated bkg: 8.0000 / 9.6250
t0 10.0 10.0
map 2 6 0 0 0 0 0 0 0 0
fit 0.2 9
packing 5
RUN 045674 BNMR TRIUMF MUD (name beamline institute data-file-format)
fittype 2 (asymmetry fit)
alpha 1
forward 5
backward 6
data 11 1000 11 1000
background 1 9 1 9 # estimated bkg: 11.6250 / 15.6250
t0 10.0 10.0
map 2 7 0 0 0 0 0 0 0 0
fit 0.2 9
packing 5
###############################################################
COMMANDS
MINIMIZE
HESSE
SAVE
###############################################################
PLOT 2 (asymmetry plot)
runs 1 2
use_fit_ranges
view_packing 10
###############################################################
FOURIER
units MHz # units either 'Gauss', 'Tesla', 'MHz', or 'Mc/s'
fourier_power 12
apodization STRONG # NONE, WEAK, MEDIUM, STRONG
plot POWER # REAL, IMAG, REAL_AND_IMAG, POWER, PHASE, PHASE_OPT_REAL
phase 8
#range FRQMIN FRQMAX
###############################################################
STATISTIC --- 2019-05-01 11:29:06
chisq = 358.6, NDF = 345, chisq/NDF = 1.039300

View File

@ -1,54 +0,0 @@
LaAlO3, SLR, 30G, 150K, Bias=23 kV, Ix=0A, Iy=+3A, aligned, beam on=1s
###############################################################
FITPARAMETER
###############################################################
# No Name Value Err Min Max
1 Alpha 0.9 1.0 none
2 Asy 0.115 0.012 none 0 0.2
3 T 1 0 none
4 Rlx 4.16 0.88 none 0 100
5 Beta 0.433 0.031 none 0.3 2
###############################################################
THEORY
###############################################################
asymmetry 2
userFcn libBNMR SExpRlx 3 4 5
###############################################################
RUN 045674 BNMR TRIUMF MUD (name beamline institute data-file-format)
fittype 5 (beta-NMR fit)
alpha 1
forward 3 5
backward 4 6
data 11 910 11 910
background 1 9 1 9 # estimated bkg: 8.0000 / 9.6250
t0 10.0 10.0 10.0 10.0
map 0 0 0 0 0 0 0 0 0 0
fit 0.2 9
packing 5
###############################################################
COMMANDS
MINIMIZE
HESSE
SAVE
###############################################################
PLOT 5 (beta-NMR asymmetry plot)
runs 1
use_fit_ranges
view_packing 10
###############################################################
FOURIER
units MHz # units either 'Gauss', 'Tesla', 'MHz', or 'Mc/s'
fourier_power 12
apodization STRONG # NONE, WEAK, MEDIUM, STRONG
plot POWER # REAL, IMAG, REAL_AND_IMAG, POWER, PHASE, PHASE_OPT_REAL
phase 8
#range FRQMIN FRQMAX
###############################################################
STATISTIC --- 2019-05-03 17:07:01
chisq = 210.2, NDF = 171, chisq/NDF = 1.229344

Binary file not shown.

View File

@ -1,57 +0,0 @@
n/a
###############################################################
FITPARAMETER
# Nr. Name Value Step Pos_Error Boundaries
1 f1 0.1531 0.0078 none
2 f2 0.04051 0.00021 none
3 f3 0.00447 0.00054 none
4 x1 39.7 6.4 none
5 x2 103.8 4.8 none
###############################################################
THEORY
userFcn libPDepthProfile PDepthProfile 1 2 3 4 5
###############################################################
RUN data/1300Ar_PECVD_Escan_260K_5G_withDiaFrac MUE4 PSI DAT (name beamline institute data-file-format)
fittype 8 (non muSR fit)
map 0 0 0 0 0 0 0 0 0 0
xy-data dataE AsymCorrected
fit 1 25
packing 1
###############################################################
COMMANDS
MINIMIZE
#HESSE
MINOS
SAVE
###############################################################
PLOT 8 (non muSR plot)
runs 1
range 0 25
###############################################################
STATISTIC --- 2023-02-16 15:19:15
chisq = 28.6, NDF = 10, chisq/NDF = 2.856386

View File

@ -1,57 +0,0 @@
n/a
###############################################################
FITPARAMETER
# Nr. Name Value Step Pos_Error Boundaries
1 f1 0.379 -0.014 0.014
2 f2 0.1866 -0.0034 0.0034
3 f3 0.0201 -0.0024 0.0024
4 x1 55.9 1.1 none
5 x2 103.80 0.19 none
###############################################################
THEORY
userFcn libPDepthProfile PDepthProfile 1 2 3 4 5
###############################################################
RUN data/1300Ar_PECVD_Escan_260K_5G_withDiaFrac MUE4 PSI DAT (name beamline institute data-file-format)
fittype 8 (non muSR fit)
map 0 0 0 0 0 0 0 0 0 0
xy-data dataE DiaFrac
fit 1 25
packing 1
###############################################################
COMMANDS
MINIMIZE
#HESSE
MINOS
SAVE
###############################################################
PLOT 8 (non muSR plot)
runs 1
range 0 25
###############################################################
STATISTIC --- 2023-02-16 15:20:11
chisq = 28.3, NDF = 10, chisq/NDF = 2.831612

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@ -1,55 +0,0 @@
DEPTH PARTICLES
5. 1085
15. 2257
25. 2936
35. 3431
45. 3826
55. 4232
65. 4472
75. 4777
85. 4907
95. 5151
105. 5117
115. 5205
125. 5038
135. 4803
145. 4568
155. 4366
165. 3973
175. 3570
185. 3174
195. 2766
205. 2294
215. 1932
225. 1520
235. 1279
245. 950
255. 737
265. 503
275. 374
285. 243
295. 181
305. 126
315. 75
325. 45
335. 27
345. 15
355. 8
365. 2
375. 2
385. 0
395. 0
405. 0
415. 0
425. 0
435. 0
445. 0
455. 0
465. 0
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535. 0

View File

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DEPTH PARTICLES
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15. 12
25. 20
35. 19
45. 23
55. 38
65. 23
75. 29
85. 33
95. 34
105. 33
115. 48
125. 38
135. 64
145. 47
155. 60
165. 48
175. 58
185. 65
195. 83
205. 80
215. 72
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235. 84
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255. 108
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305. 163
315. 153
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1005. 307
1015. 165
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1045. 5
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1075. 0
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1105. 0
1115. 0
1125. 0
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1145. 0
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1265. 0

View File

@ -1,137 +0,0 @@
DEPTH PARTICLES
5. 5
15. 5
25. 15
35. 15
45. 28
55. 23
65. 23
75. 27
85. 21
95. 37
105. 24
115. 29
125. 28
135. 44
145. 48
155. 46
165. 44
175. 45
185. 50
195. 53
205. 48
215. 59
225. 67
235. 51
245. 73
255. 85
265. 67
275. 79
285. 73
295. 95
305. 84
315. 88
325. 101
335. 107
345. 100
355. 126
365. 144
375. 120
385. 171
395. 146
405. 147
415. 175
425. 184
435. 205
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455. 238
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705. 1264
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805. 2346
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1025. 1345
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View File

@ -1,144 +0,0 @@
DEPTH PARTICLES
5. 1
15. 13
25. 11
35. 8
45. 18
55. 13
65. 12
75. 14
85. 16
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105. 23
115. 24
125. 28
135. 29
145. 29
155. 35
165. 25
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185. 37
195. 37
205. 30
215. 40
225. 52
235. 47
245. 49
255. 60
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275. 54
285. 51
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305. 60
315. 69
325. 62
335. 71
345. 48
355. 98
365. 97
375. 105
385. 91
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415. 112
425. 134
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455. 132
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475. 170
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535. 262
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555. 320
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View File

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DEPTH PARTICLES
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125. 15
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View File

@ -1,160 +0,0 @@
DEPTH PARTICLES
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15. 0
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135. 8
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155. 22
165. 20
175. 16
185. 23
195. 23
205. 23
215. 26
225. 25
235. 28
245. 37
255. 26
265. 27
275. 39
285. 51
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View File

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dataT dataTErr dataB dataE dataTr dataRALRAR dataRATRAB dataSpinRot Asym_Mu Asym_MuPosErr Asym_MuNegErr Lambda_Mu Lambda_MuPosErr Lambda_MuNegErr freq_Mu1 freq_Mu1PosErr freq_Mu1NegErr Asym_muon Asym_muonPosErr Asym_muonNegErr Sigma_muon Sigma_muonPosErr Sigma_muonNegErr field fieldPosErr fieldNegErr ph_LR ph_LRPosErr ph_LRNegErr Alpha_LR Alpha_LRPosErr Alpha_LRNegErr relph_TB relph_TBPosErr relph_TBNegErr relph_TB_Mu relph_TB_MuPosErr relph_TB_MuNegErr Alpha_TB Alpha_TBPosErr Alpha_TBNegErr Zero ZeroPosErr ZeroNegErr freqMu2 freqMu2PosErr freqMu2NegErr Asym_MuSiO2 Asym_MuSiO2PosErr Asym_MuSiO2NegErr Lambda_MuSiO2 Lambda_MuSiO2PosErr Lambda_MuSiO2NegErr freqMuSiO2 freqMuSiO2PosErr freqMuSiO2NegErr CHISQ NDF CHISQred RUN AsymCorrected AsymCorrectedErr AsymAg DiaFrac DiaFracErr
260.0000 0.0060 4.4400 6.9980 16.4946 -0.0100 -0.0090 -10.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 9.2100 0.0000 0.0000 0.0730 0.0012 0.0011 0.1359 0.0079 0.0080 7.0900 0.0270 0.0310 363.4600 0.8000 0.7800 1.0099 0.0019 0.0019 -90.0000 0.0000 0.0000 90.0000 0.0000 0.0000 0.9959 0.0017 0.0017 0.0000 0.0000 0.0000 10.8000 0.0000 0.0000 0.0813 0.0102 0.0090 2.1300 0.3700 0.3200 0.0000 0.0000 0.0000 2320.3999 2224.0000 1.0433 3817.0000 0.0565 0.0012 0.2019 0.2797 0.0059
260.0000 0.0050 4.4500 8.9961 16.4946 -0.0100 -0.0090 -10.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 9.2100 0.0000 0.0000 0.0608 0.0011 0.0011 0.1190 0.0097 0.0100 7.1670 0.0110 0.0120 359.4000 0.7900 0.7900 1.0072 0.0018 0.0018 -90.0000 0.0000 0.0000 90.0000 0.0000 0.0000 0.9898 0.0016 0.0016 0.0000 0.0000 0.0000 10.8000 0.0000 0.0000 0.0765 0.0058 0.0055 1.1400 0.1400 0.1300 0.0000 0.0000 0.0000 2366.3999 2224.0000 1.0640 3818.0000 0.0462 0.0011 0.2110 0.2190 0.0052
260.0000 0.0060 4.4510 9.9949 16.4946 -0.0100 -0.0090 -10.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 9.2100 0.0000 0.0000 0.0586 0.0011 0.0011 0.1100 0.0110 0.0110 7.1628 0.0096 0.0101 358.3500 0.8000 0.8000 1.0097 0.0018 0.0018 -90.0000 0.0000 0.0000 90.0000 0.0000 0.0000 0.9877 0.0016 0.0016 0.0000 0.0000 0.0000 10.8000 0.0000 0.0000 0.0781 0.0054 0.0051 1.1600 0.1200 0.1100 0.0000 0.0000 0.0000 2404.7000 2224.0000 1.0812 3819.0000 0.0445 0.0011 0.2139 0.2080 0.0051
260.0000 0.0050 4.4480 10.9940 16.4946 -0.0100 -0.0090 -10.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 9.2100 0.0000 0.0000 0.0565 0.0011 0.0011 0.1060 0.0110 0.0110 7.0730 0.0200 0.0210 358.7500 0.9000 0.9000 1.0121 0.0018 0.0018 -90.0000 0.0000 0.0000 90.0000 0.0000 0.0000 0.9882 0.0016 0.0016 0.0000 0.0000 0.0000 10.8000 0.0000 0.0000 0.0910 0.0081 0.0075 1.9600 0.2400 0.2100 0.0000 0.0000 0.0000 2387.1001 2224.0000 1.0733 3820.0000 0.0427 0.0011 0.2161 0.1977 0.0051
260.0000 0.0050 4.4500 11.9930 16.4946 -0.0090 -0.0090 -10.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 9.2100 0.0000 0.0000 0.0548 0.0011 0.0011 0.1210 0.0100 0.0110 7.1610 0.0140 0.0160 358.4900 0.8800 0.8700 1.0151 0.0018 0.0018 -90.0000 0.0000 0.0000 90.0000 0.0000 0.0000 0.9912 0.0016 0.0016 0.0000 0.0000 0.0000 10.8000 0.0000 0.0000 0.0470 0.0053 0.0048 1.0500 0.2000 0.1600 0.0000 0.0000 0.0000 2299.3000 2224.0000 1.0339 3821.0000 0.0412 0.0011 0.2178 0.1893 0.0051
260.0000 0.0060 4.4500 12.9921 16.4946 -0.0090 -0.0090 -10.0000 0.0237 0.0039 0.0037 0.7300 0.1600 0.1400 0.0000 0.0000 0.0000 0.0432 0.0013 0.0013 0.1090 0.0150 0.0160 6.6470 0.0520 0.0520 362.9000 1.5000 1.5000 1.0200 0.0022 0.0022 -90.0000 0.0000 0.0000 90.0000 0.0000 0.0000 0.9875 0.0018 0.0018 0.0000 0.0000 0.0000 9.9840 0.0260 0.0270 0.0650 0.0180 0.0140 3.5200 0.9800 0.7700 0.0000 0.0000 0.0000 2256.7000 2221.0000 1.0161 3822.0000 0.0298 0.0013 0.2191 0.1358 0.0059
260.0000 0.0050 4.4520 13.9909 16.4946 -0.0100 -0.0090 -10.0000 0.0320 0.0058 0.0049 2.0300 0.6100 0.4500 9.1330 0.0770 0.0820 0.0375 0.0011 0.0010 0.0950 0.0170 0.0190 7.5000 0.0000 0.0000 -5.9000 1.1000 1.1000 1.0125 0.0017 0.0017 -90.0000 0.0000 0.0000 90.0000 0.0000 0.0000 0.9840 0.0015 0.0015 0.0000 0.0000 0.0000 9.9900 0.0530 0.0610 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 2252.0000 2223.0000 1.0130 3823.0000 0.0241 0.0011 0.2200 0.1097 0.0050
260.0000 0.0050 4.4500 14.9898 16.4946 -0.0100 -0.0090 -10.0000 0.0550 0.0160 0.0110 4.2000 1.6000 1.0000 9.1090 0.0940 0.1010 0.0329 0.0011 0.0011 0.1240 0.0170 0.0180 7.5000 0.0000 0.0000 -4.6000 1.4000 1.3000 1.0149 0.0017 0.0017 -90.0000 0.0000 0.0000 90.0000 0.0000 0.0000 0.9859 0.0015 0.0015 0.0000 0.0000 0.0000 10.1400 0.1000 0.1300 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 2219.8000 2223.0000 0.9986 3824.0000 0.0196 0.0011 0.2208 0.0888 0.0050
260.0000 0.0060 4.4500 15.9972 16.4946 -0.0100 -0.0090 -10.0000 0.0240 0.0050 0.0040 1.6400 0.5900 0.3800 9.0870 0.0610 0.0620 0.0293 0.0011 0.0011 0.1460 0.0190 0.0200 7.5000 0.0000 0.0000 -8.4000 1.6000 1.6000 1.0168 0.0019 0.0018 -90.0000 0.0000 0.0000 90.0000 0.0000 0.0000 0.9807 0.0015 0.0015 0.0000 0.0000 0.0000 10.0240 0.0520 0.0600 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 2290.2000 2223.0000 1.0302 3825.0000 0.0160 0.0011 0.2214 0.0724 0.0050
260.0000 0.0060 4.4600 16.9959 16.4946 -0.0100 -0.0090 -10.0000 0.0455 0.0110 0.0081 2.8000 1.0000 0.7200 0.0000 0.0000 0.0000 0.0212 0.0011 0.0011 0.0770 0.0320 0.0500 7.5000 0.0000 0.0000 -12.3000 2.2000 2.2000 1.0182 0.0019 0.0018 -90.0000 0.0000 0.0000 90.0000 0.0000 0.0000 0.9827 0.0014 0.0014 0.0000 0.0000 0.0000 9.2480 0.0670 0.0590 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 2312.0000 2224.0000 1.0396 3826.0000 0.0080 0.0011 0.2218 0.0359 0.0050
260.0000 0.0060 4.4590 17.9950 16.4946 -0.0090 -0.0090 -10.0000 0.0850 0.0250 0.0190 7.0000 1.7000 1.4000 0.0000 0.0000 0.0000 0.0194 0.0013 0.0012 0.0950 0.0320 0.0420 6.9900 0.3200 0.3400 355.5000 5.2000 5.0000 1.0173 0.0019 0.0019 -90.0000 0.0000 0.0000 90.0000 0.0000 0.0000 0.9846 0.0023 0.0021 0.0000 0.0000 0.0000 9.5800 0.1700 0.1700 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 2096.3999 2223.0000 0.9431 3827.0000 0.0062 0.0013 0.2221 0.0278 0.0059
260.0000 0.0060 4.4600 18.9939 16.4946 -0.0100 -0.0090 -10.0000 0.0540 0.0250 0.0160 5.3000 2.4000 1.7000 0.0000 0.0000 0.0000 0.0205 0.0020 0.0017 0.1080 0.0400 0.0490 6.6700 0.4100 0.4500 358.4000 6.6000 6.3000 1.0209 0.0027 0.0025 -90.0000 0.0000 0.0000 90.0000 0.0000 0.0000 0.9832 0.0033 0.0028 0.0000 0.0000 0.0000 9.1400 0.2100 0.1900 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 2133.8000 2223.0000 0.9599 3828.0000 0.0073 0.0020 0.2224 0.0327 0.0090
260.0000 0.0040 4.4500 19.9932 16.4946 -0.0100 -0.0090 -10.0000 0.0920 0.0550 0.0330 8.7000 3.5000 2.9000 0.0000 0.0000 0.0000 0.0173 0.0014 0.0014 0.1050 0.0420 0.0570 7.1600 0.0000 0.0000 -9.5000 3.4000 3.4000 1.0189 0.0024 0.0023 -90.0000 0.0000 0.0000 90.0000 0.0000 0.0000 0.9887 0.0018 0.0018 0.0000 0.0000 0.0000 9.3800 0.2100 0.2000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 2261.3999 2224.0000 1.0168 3829.0000 0.0041 0.0014 0.2226 0.0184 0.0063
260.0000 0.0040 4.4500 20.9920 16.4946 -0.0090 -0.0090 -10.0000 0.0292 0.0101 0.0076 2.0900 0.9000 0.6500 9.0670 0.0830 0.0790 0.0199 0.0015 0.0014 0.1640 0.0380 0.0370 7.1600 0.0000 0.0000 -12.2000 2.7000 2.7000 1.0147 0.0024 0.0022 -90.0000 0.0000 0.0000 90.0000 0.0000 0.0000 0.9891 0.0018 0.0018 0.0000 0.0000 0.0000 10.8640 0.0700 0.0610 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 2157.5000 2223.0000 0.9705 3830.0000 0.0067 0.0015 0.2228 0.0300 0.0067
260.0000 0.0060 4.4490 21.9912 16.4946 -0.0090 -0.0090 -10.0000 0.0364 0.0094 0.0090 2.7000 0.8300 0.8000 9.1320 0.0840 0.0800 0.0193 0.0014 0.0013 0.1550 0.0350 0.0350 7.1600 0.0000 0.0000 -7.6000 2.7000 2.7000 1.0140 0.0022 0.0021 -90.0000 0.0000 0.0000 90.0000 0.0000 0.0000 0.9907 0.0017 0.0017 0.0000 0.0000 0.0000 10.8540 0.0830 0.1010 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 2162.2000 2223.0000 0.9726 3831.0000 0.0061 0.0014 0.2229 0.0273 0.0063

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<?xml version="1.0" encoding="UTF-8"?>
<depthProf xmlns="http://nemu.web.psi.ch/musrfit/depthProf">
<comment>
TrimSp information
</comment>
<trim_sp>
<data_path>./TRIMSP/</data_path>
<rge_fln_pre>SiC_1300x_52nm_48nm_E</rge_fln_pre>
<energy_vect start="1000" stop="22000" step="1000"/>
</trim_sp>
</depthProf>

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@ -1,57 +0,0 @@
n/a
###############################################################
FITPARAMETER
# Nr. Name Value Step Pos_Error Boundaries
1 f1 0.4157 0.0029 none 0 1
2 f2 0.22821 0.00058 none 0 1
3 f3 0.02658 0.00045 none 0 1
4 x1 42.3 1.0 none
5 x2 99.5008 0.0029 none
###############################################################
THEORY
userFcn libPDepthProfile PDepthProfile 1 2 3 4 5
###############################################################
RUN data/1300x_PECVD_Escan_260K_100G_withDiaFrac MUE4 PSI DAT (name beamline institute data-file-format)
fittype 8 (non muSR fit)
map 0 0 0 0 0 0 0 0 0 0
xy-data dataE DiaFrac
fit 1 22
packing 1
###############################################################
COMMANDS
MINIMIZE
#HESSE
MINOS
SAVE
###############################################################
PLOT 8 (non muSR plot)
runs 1
range 2.5 22
###############################################################
STATISTIC --- 2023-01-31 11:22:41
chisq = 122.1, NDF = 14, chisq/NDF = 8.723769

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@ -1,57 +0,0 @@
n/a
###############################################################
FITPARAMETER
# Nr. Name Value Step Pos_Error Boundaries
1 f1 0.07038 0.00053 none
2 f2 0.03252 0.00055 none -0.5 1
3 x1 86.7 10.8 none
###############################################################
THEORY
userFcn libPDepthProfile PDepthProfile 1 2 3
###############################################################
RUN data/1300x_PECVD_Escan_260K_5G_noDiaFrac MUE4 PSI DAT (name beamline institute data-file-format)
fittype 8 (non muSR fit)
map 0 0 0 0 0 0 0 0 0 0
xy-data dataE Asym_muon
fit 1 22
packing 1
###############################################################
COMMANDS
MINIMIZE
#HESSE
MINOS
SAVE
###############################################################
PLOT 8 (non muSR plot)
runs 1
range 0 22
###############################################################
STATISTIC --- 2023-02-16 15:29:27
chisq = 42.1, NDF = 6, chisq/NDF = 7.024748

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@ -1,20 +0,0 @@
dataT dataTErr dataB dataE dataTr dataRALRAR dataRATRAB dataSpinRot Asy AsyPosErr AsyNegErr Sigma SigmaPosErr SigmaNegErr Ph PhPosErr PhNegErr Field FieldPosErr FieldNegErr RelPh_L RelPh_LPosErr RelPh_LNegErr N0_L N0_LPosErr N0_LNegErr N_bkg_L N_bkg_LPosErr N_bkg_LNegErr RelPh_T RelPh_TPosErr RelPh_TNegErr N0_T N0_TPosErr N0_TNegErr N_bkg_T N_bkg_TPosErr N_bkg_TNegErr RelPh_R RelPh_RPosErr RelPh_RNegErr alpha_LR alpha_LRPosErr alpha_LRNegErr N_bkg_R N_bkg_RPosErr N_bkg_RNegErr RelPh_B RelPh_BPosErr RelPh_BNegErr alpha_TB alpha_TBPosErr alpha_TBNegErr N_bkg_B N_bkg_BPosErr N_bkg_BNegErr maxLH NDF maxLHred RUN AsymCorrected AsymCorrectedErr AsymAg DiaFrac DiaFracErr
259.9980 0.0050 99.4870 21.9908 16.4943 -0.0090 -0.0090 -10.0000 0.0189 0.0009 0.0009 0.2110 0.0370 0.0380 6.9000 3.3000 3.3000 102.0700 0.3500 0.3600 0.0000 0.0000 0.0000 307.1100 0.3400 0.3500 6.4110 0.0520 0.0520 -90.0000 0.0000 0.0000 318.1600 0.3500 0.3400 6.6130 0.0520 0.0530 180.0000 0.0000 0.0000 0.9960 0.0016 0.0016 6.6640 0.0530 0.0520 90.0000 0.0000 0.0000 0.9709 0.0015 0.0015 6.4340 0.0520 0.0520 3626.0000 3648.0000 0.9940 1768.0000 0.0056 0.0009 0.2229 0.0253 0.0041
260.0010 0.0050 99.4860 20.9917 16.4944 -0.0100 -0.0090 -10.0000 0.0173 0.0008 0.0008 0.1150 0.0380 0.0480 14.6000 3.3000 3.3000 101.5700 0.2900 0.2900 0.0000 0.0000 0.0000 307.7100 0.3400 0.3400 6.2450 0.0520 0.0520 -90.0000 0.0000 0.0000 319.7600 0.3500 0.3500 6.4440 0.0530 0.0530 180.0000 0.0000 0.0000 0.9888 0.0016 0.0016 6.6200 0.0520 0.0520 90.0000 0.0000 0.0000 0.9675 0.0015 0.0015 6.2600 0.0520 0.0520 3534.0000 3648.0000 0.9688 1769.0000 0.0041 0.0008 0.2228 0.0186 0.0036
259.9990 0.0040 99.4850 19.9929 16.4944 -0.0090 -0.0090 -10.0000 0.0189 0.0008 0.0008 0.1850 0.0310 0.0320 12.8000 3.2000 3.2000 101.5500 0.3300 0.3300 0.0000 0.0000 0.0000 307.4900 0.3400 0.3400 6.1700 0.0520 0.0510 -90.0000 0.0000 0.0000 318.8100 0.3500 0.3500 6.4530 0.0520 0.0530 180.0000 0.0000 0.0000 0.9956 0.0016 0.0016 6.5020 0.0520 0.0520 90.0000 0.0000 0.0000 0.9658 0.0015 0.0015 6.3610 0.0520 0.0520 3714.3000 3648.0000 1.0182 1770.0000 0.0057 0.0008 0.2226 0.0257 0.0038
260.0000 0.0040 99.4800 18.9936 16.4944 -0.0090 -0.0090 -10.0000 0.0224 0.0009 0.0009 0.1440 0.0310 0.0350 11.3000 2.5000 2.5000 101.4700 0.2400 0.2400 0.0000 0.0000 0.0000 309.8000 0.3400 0.3400 6.1220 0.0520 0.0520 -90.0000 0.0000 0.0000 320.2200 0.3500 0.3500 6.4730 0.0530 0.0530 180.0000 0.0000 0.0000 0.9840 0.0016 0.0015 6.5210 0.0520 0.0520 90.0000 0.0000 0.0000 0.9671 0.0015 0.0015 6.3290 0.0520 0.0520 3693.7000 3648.0000 1.0125 1771.0000 0.0091 0.0009 0.2224 0.0411 0.0038
260.0000 0.0040 99.4840 17.9948 16.4944 -0.0090 -0.0090 -10.0000 0.0227 0.0008 0.0008 0.1160 0.0280 0.0330 7.8000 2.6000 2.6000 101.5600 0.2300 0.2300 0.0000 0.0000 0.0000 309.8600 0.3400 0.3400 6.2460 0.0520 0.0520 -90.0000 0.0000 0.0000 318.6400 0.3500 0.3500 6.5590 0.0530 0.0530 180.0000 0.0000 0.0000 0.9908 0.0016 0.0016 6.5410 0.0520 0.0520 90.0000 0.0000 0.0000 0.9674 0.0015 0.0015 6.2850 0.0520 0.0520 3799.8999 3648.0000 1.0416 1772.0000 0.0094 0.0008 0.2221 0.0425 0.0036
259.9990 0.0030 99.4800 16.9956 16.4944 -0.0090 -0.0090 -10.0000 0.0245 0.0008 0.0008 0.0550 0.0350 0.0550 9.7000 2.3000 2.3000 101.5300 0.1900 0.1900 0.0000 0.0000 0.0000 310.9500 0.3400 0.3400 6.1020 0.0520 0.0520 -90.0000 0.0000 0.0000 319.5300 0.3500 0.3500 6.3210 0.0530 0.0520 180.0000 0.0000 0.0000 0.9998 0.0016 0.0016 6.5870 0.0530 0.0520 90.0000 0.0000 0.0000 0.9641 0.0015 0.0015 6.2840 0.0520 0.0520 3579.0000 3648.0000 0.9811 1773.0000 0.0112 0.0008 0.2218 0.0507 0.0034
260.0010 0.0050 99.4830 15.9969 16.4944 -0.0090 -0.0100 -10.0000 0.0270 0.0008 0.0008 0.0940 0.0250 0.0310 18.5000 2.1000 2.1000 101.0900 0.1800 0.1800 0.0000 0.0000 0.0000 310.8400 0.3400 0.3400 6.1600 0.0520 0.0520 -90.0000 0.0000 0.0000 319.8000 0.3500 0.3500 6.4640 0.0530 0.0530 180.0000 0.0000 0.0000 0.9856 0.0016 0.0015 6.6430 0.0520 0.0520 90.0000 0.0000 0.0000 0.9620 0.0015 0.0015 6.2280 0.0520 0.0520 3668.1001 3648.0000 1.0055 1774.0000 0.0138 0.0008 0.2214 0.0622 0.0035
260.0000 0.0050 99.4800 14.9896 16.4944 -0.0090 -0.0100 -10.0000 0.0321 0.0008 0.0008 0.1090 0.0210 0.0240 21.3000 1.8000 1.8000 100.6400 0.1500 0.1600 0.0000 0.0000 0.0000 310.5100 0.3400 0.3400 6.0220 0.0520 0.0510 -90.0000 0.0000 0.0000 320.0000 0.3500 0.3500 6.3740 0.0520 0.0530 180.0000 0.0000 0.0000 0.9995 0.0016 0.0016 6.5310 0.0520 0.0520 90.0000 0.0000 0.0000 0.9638 0.0015 0.0015 6.2240 0.0520 0.0520 3688.7000 3648.0000 1.0112 1775.0000 0.0188 0.0008 0.2208 0.0852 0.0036
259.9990 0.0070 99.4840 13.9908 16.4944 -0.0100 -0.0100 -10.0000 0.0378 0.0008 0.0008 0.1390 0.0160 0.0170 13.9000 1.6000 1.6000 101.2900 0.1500 0.1500 0.0000 0.0000 0.0000 309.9200 0.3400 0.3500 6.2450 0.0520 0.0520 -90.0000 0.0000 0.0000 319.7900 0.3500 0.3500 6.3790 0.0520 0.0530 180.0000 0.0000 0.0000 1.0024 0.0016 0.0016 6.5540 0.0520 0.0520 90.0000 0.0000 0.0000 0.9592 0.0015 0.0015 6.2040 0.0520 0.0510 3584.0000 3648.0000 0.9825 1776.0000 0.0244 0.0008 0.2200 0.1109 0.0036
260.0010 0.0070 99.4800 12.9921 16.4944 -0.0090 -0.0100 -10.0000 0.0438 0.0008 0.0008 0.1140 0.0140 0.0150 11.7000 1.3000 1.3000 101.6000 0.1200 0.1200 0.0000 0.0000 0.0000 312.5200 0.3400 0.3500 6.1510 0.0520 0.0520 -90.0000 0.0000 0.0000 320.1200 0.3500 0.3400 6.3970 0.0520 0.0530 180.0000 0.0000 0.0000 0.9942 0.0016 0.0015 6.4640 0.0520 0.0520 90.0000 0.0000 0.0000 0.9622 0.0015 0.0015 6.1950 0.0520 0.0520 3427.6001 3648.0000 0.9396 1777.0000 0.0303 0.0008 0.2191 0.1385 0.0036
259.9980 0.0050 99.4800 11.9928 16.4945 -0.0090 -0.0090 -10.0000 0.0517 0.0008 0.0008 0.0930 0.0140 0.0160 14.3000 1.1000 1.1000 101.3650 0.0930 0.0930 0.0000 0.0000 0.0000 311.7100 0.3400 0.3500 6.0330 0.0520 0.0510 -90.0000 0.0000 0.0000 318.4700 0.3500 0.3400 6.3530 0.0520 0.0530 180.0000 0.0000 0.0000 0.9945 0.0016 0.0015 6.6250 0.0530 0.0520 90.0000 0.0000 0.0000 0.9632 0.0015 0.0015 6.0950 0.0520 0.0510 3576.7000 3648.0000 0.9805 1778.0000 0.0381 0.0008 0.2178 0.1751 0.0036
260.0020 0.0070 99.4760 10.9941 16.4945 -0.0100 -0.0090 -10.0000 0.0588 0.0008 0.0008 0.1200 0.0110 0.0110 15.0300 0.9900 0.9900 101.3480 0.0880 0.0880 0.0000 0.0000 0.0000 310.9300 0.3400 0.3400 6.2370 0.0520 0.0520 -90.0000 0.0000 0.0000 318.9400 0.3500 0.3400 6.3220 0.0520 0.0530 180.0000 0.0000 0.0000 0.9972 0.0016 0.0016 6.5920 0.0520 0.0520 90.0000 0.0000 0.0000 0.9630 0.0015 0.0015 6.1340 0.0520 0.0520 3697.3999 3648.0000 1.0135 1779.0000 0.0451 0.0008 0.2161 0.2085 0.0037
259.9990 0.0040 99.4780 9.9949 16.4944 -0.0090 -0.0090 -10.0000 0.0637 0.0008 0.0008 0.0840 0.0120 0.0130 18.0300 0.9000 0.8900 101.1790 0.0750 0.0760 0.0000 0.0000 0.0000 309.4700 0.3400 0.3400 6.1330 0.0520 0.0510 -90.0000 0.0000 0.0000 319.3200 0.3500 0.3500 6.2810 0.0520 0.0530 180.0000 0.0000 0.0000 1.0038 0.0016 0.0016 6.6150 0.0520 0.0530 90.0000 0.0000 0.0000 0.9603 0.0015 0.0015 6.0590 0.0520 0.0510 3728.6001 3648.0000 1.0221 1780.0000 0.0497 0.0008 0.2139 0.2321 0.0036
260.0010 0.0060 99.4820 8.9960 16.4945 -0.0090 -0.0090 -10.0000 0.0665 0.0008 0.0008 0.1030 0.0100 0.0110 18.6200 0.8600 0.8600 101.2670 0.0740 0.0740 0.0000 0.0000 0.0000 310.4800 0.3400 0.3500 5.9660 0.0520 0.0510 -90.0000 0.0000 0.0000 318.5100 0.3500 0.3400 6.3040 0.0520 0.0530 180.0000 0.0000 0.0000 0.9986 0.0016 0.0015 6.6620 0.0520 0.0530 90.0000 0.0000 0.0000 0.9627 0.0015 0.0015 6.1230 0.0520 0.0510 3587.3000 3648.0000 0.9834 1781.0000 0.0519 0.0008 0.2110 0.2462 0.0037
259.9990 0.0090 99.4800 6.9982 16.4945 -0.0090 -0.0090 -10.0000 0.0715 0.0008 0.0008 0.1211 0.0086 0.0091 17.1600 0.8200 0.8200 101.1230 0.0720 0.0730 0.0000 0.0000 0.0000 313.3200 0.3400 0.3500 5.9760 0.0520 0.0520 -90.0000 0.0000 0.0000 320.7800 0.3500 0.3500 6.2370 0.0520 0.0530 180.0000 0.0000 0.0000 0.9914 0.0016 0.0015 6.5660 0.0520 0.0520 90.0000 0.0000 0.0000 0.9568 0.0015 0.0015 6.0440 0.0520 0.0510 3532.3000 3648.0000 0.9683 1782.0000 0.0549 0.0008 0.2019 0.2721 0.0039
260.0010 0.0070 99.4800 5.0084 11.9989 -0.0080 -0.0080 -10.0000 0.0687 0.0008 0.0008 0.1333 0.0090 0.0093 19.4000 0.8400 0.8400 101.1300 0.0760 0.0760 0.0000 0.0000 0.0000 312.8000 0.3400 0.3500 5.6030 0.0510 0.0510 -90.0000 0.0000 0.0000 315.9700 0.3500 0.3400 5.8100 0.0510 0.0520 180.0000 0.0000 0.0000 1.0046 0.0016 0.0015 6.1330 0.0520 0.0520 90.0000 0.0000 0.0000 0.9559 0.0015 0.0015 5.5120 0.0510 0.0500 3703.7000 3648.0000 1.0153 1786.0000 0.0564 0.0008 0.1714 0.3291 0.0047
259.9990 0.0040 99.4800 4.0095 11.9989 -0.0080 -0.0080 -10.0000 0.0726 0.0008 0.0008 0.1520 0.0079 0.0080 18.6900 0.8300 0.8300 101.2350 0.0780 0.0780 0.0000 0.0000 0.0000 305.7300 0.3400 0.3400 5.5080 0.0510 0.0500 -90.0000 0.0000 0.0000 317.1300 0.3500 0.3400 5.8440 0.0520 0.0520 180.0000 0.0000 0.0000 1.0351 0.0016 0.0016 6.3320 0.0520 0.0520 90.0000 0.0000 0.0000 0.9532 0.0015 0.0015 5.7120 0.0510 0.0510 3675.3999 3648.0000 1.0075 1785.0000 0.0582 0.0008 0.1632 0.3564 0.0049
260.0000 0.0060 99.4800 3.0103 11.9989 -0.0080 -0.0080 -10.0000 0.0790 0.0008 0.0008 0.1489 0.0072 0.0073 18.9800 0.7500 0.7500 101.2100 0.0700 0.0700 0.0000 0.0000 0.0000 305.8800 0.3300 0.3400 4.7740 0.0500 0.0490 -90.0000 0.0000 0.0000 321.4400 0.3500 0.3400 5.1770 0.0510 0.0510 180.0000 0.0000 0.0000 1.0492 0.0016 0.0016 5.5870 0.0520 0.0510 90.0000 0.0000 0.0000 0.9542 0.0015 0.0015 4.9270 0.0500 0.0500 3820.3000 3648.0000 1.0472 1784.0000 0.0596 0.0008 0.1505 0.3960 0.0052
260.0010 0.0050 99.4800 2.0117 11.9990 -0.0080 -0.0080 -10.0000 0.0876 0.0008 0.0008 0.1596 0.0066 0.0068 20.6200 0.6800 0.6800 100.8890 0.0650 0.0650 0.0000 0.0000 0.0000 303.6100 0.3400 0.3400 5.4660 0.0510 0.0500 -90.0000 0.0000 0.0000 318.3500 0.3500 0.3400 5.7660 0.0510 0.0520 180.0000 0.0000 0.0000 1.0639 0.0017 0.0016 6.2660 0.0530 0.0530 90.0000 0.0000 0.0000 0.9477 0.0015 0.0015 5.6210 0.0510 0.0500 3815.1001 3648.0000 1.0458 1783.0000 0.0568 0.0008 0.1291 0.4397 0.0063

View File

@ -1,10 +0,0 @@
dataT dataTErr dataB dataE dataTr dataRALRAR dataRATRAB dataSpinRot Asym_Mu Asym_MuPosErr Asym_MuNegErr Lambda_Mu Lambda_MuPosErr Lambda_MuNegErr freq_Mu1 freq_Mu1PosErr freq_Mu1NegErr Asym_muon Asym_muonPosErr Asym_muonNegErr Sigma_muon Sigma_muonPosErr Sigma_muonNegErr field fieldPosErr fieldNegErr ph_LR ph_LRPosErr ph_LRNegErr Alpha_LR Alpha_LRPosErr Alpha_LRNegErr relph_TB relph_TBPosErr relph_TBNegErr relph_TB_Mu relph_TB_MuPosErr relph_TB_MuNegErr Alpha_TB Alpha_TBPosErr Alpha_TBNegErr Zero ZeroPosErr ZeroNegErr freqMu2 freqMu2PosErr freqMu2NegErr Asym_MuSiO2 Asym_MuSiO2PosErr Asym_MuSiO2NegErr Lambda_MuSiO2 Lambda_MuSiO2PosErr Lambda_MuSiO2NegErr freqMuSiO2 freqMuSiO2PosErr freqMuSiO2NegErr CHISQ NDF CHISQred RUN
259.999 0.006 4.48 21.9909 16.4945 -0.009 -0.009 -10 0.055 0.064 -0.021 7.2 5.8 -2.7 8.858 0.075 0.084 0.0282 0.0016 -0.0015 0.108 0.025 -0.028 6.03 0.17 0.18 -11.5 2.9 -2.9 0.9996 0.0026 -0.0025 -90 0 0 90 0 0 1.0013 0.0024 -0.0023 0 0 0 10.314 0.094 0.11 0 0 0 0 0 0 0 0 0 8745.7 8897 0.982994 1793
260 0.009 4.48 19.9929 16.4945 -0.009 -0.009 -10 0.037 0.02 -0.011 4.7 2.9 -1.5 8.858 0.075 0.084 0.0306 0.0019 -0.0017 0.137 0.027 -0.028 6.03 0.17 0.18 -11 3 -2.9 1.0026 0.0033 -0.003 -90 0 0 90 0 0 1.0027 0.0025 -0.0024 0 0 0 10.314 0.094 0.11 0 0 0 0 0 0 0 0 0 8745.7 8897 0.982994 1794
260 0.006 4.473 17.9949 16.4945 -0.009 -0.01 -10 0.046 0.017 -0.01 4.7 2 -1.2 8.858 0.075 0.084 0.0341 0.0018 -0.0017 0.212 0.022 -0.02 6.03 0.17 0.18 -13.3 2.4 -2.4 1.0115 0.0031 -0.0029 -90 0 0 90 0 0 0.9954 0.0021 -0.0021 0 0 0 10.314 0.094 0.11 0 0 0 0 0 0 0 0 0 8745.7 8897 0.982994 1795
260 0.007 4.475 15.997 16.4945 -0.009 -0.01 -10 0.0455 0.0104 -0.0083 3.7 1 -0.76 8.858 0.075 0.084 0.036 0.0019 -0.0018 0.21 0.023 -0.022 6.03 0.17 0.18 -6.1 2.4 -2.3 1.0039 0.0033 -0.0031 -90 0 0 90 0 0 1.0009 0.0022 -0.0021 0 0 0 10.314 0.094 0.11 0 0 0 0 0 0 0 0 0 8745.7 8897 0.982994 1796
260 0.007 4.476 13.9907 16.4945 -0.01 -0.01 -10 0.0258 0.0126 0.0087 2 1.4 0.87 10.16 0.12 0.1 0.0404 0.0039 0.0032 0.181 0.032 0.03 6.05 0.41 0.46 -0.6 4.5 4.4 0.9992 0.0061 0.0047 -90 0 0 90 0 0 1.0043 0.0052 0.0047 0 0 0 8.91 0.1 0.165 0 0 0 0 0 0 0 0 0 2038.1 2222 0.9172 1797
260 0.007 4.479 11.9929 16.4945 -0.009 -0.009 -10 0 0 0 0 0 0 9.2 9.9 9.9 0.0499 0.0008 0.0008 0.1606 0.0092 0.0092 7.0309 0.0077 0.0077 -7.81 0.57 0.57 0.995 0.0015 0.0015 -90 0 0 90 0 0 0.9879 0.0009 0.0009 0 0 0 -77.1 33.7 33.7 0.053 0.013 0.013 1.63 0.53 0.53 0 0 0 2197.2 2222 0.9888 1798
260 0.008 4.477 9.995 16.4945 -0.009 -0.009 -10 0 0 0 0 0 0 8.4 2.1 8.4 0.0589 0.0011 0.0011 0.119 0.01 0.01 7.004 0.013 0.014 -5 0.83 0.83 0.989 0.0018 0.0018 -90 0 0 90 0 0 0.9878 0.0016 0.0016 0 0 0 9.2 1.4 1.4 0.0855 0.0073 0.0067 1.53 0.2 0.17 0 0 0 2299.1001 2222 1.0347 1799
260 0.006 4.472 8.9961 16.4945 -0.01 -0.009 -10 0 0 0 0 0 0 10.214 0 0 0.0701 0.0011 0.001 0.0972 0.0091 0.0097 7.327 0.011 0.011 -3.59 0.67 0.67 0.9619 0.0017 0.0017 -90 0 0 90 0 0 0.988 0.0016 0.0016 0 0 0 6.764 0 0 0.0732 0.0055 0.0052 1.25 0.14 0.13 0 0 0 2343.2 2224 1.0536 1788
260 0.006 4.468 6.9983 16.4945 -0.01 -0.009 -10 0 0 0 0 0 0 10.214 0 0 0.0708 0.0011 0.0011 0.106 0.0086 0.009 7.295 0.016 0.017 -0.84 0.69 0.69 0.9535 0.0017 0.0017 -90 0 0 90 0 0 0.9884 0.0016 0.0016 0 0 0 6.764 0 0 0.0681 0.0064 0.0059 1.6 0.2 0.18 0 0 0 2271.8 2224 1.0215 1787

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@ -1,11 +0,0 @@
<?xml version="1.0" encoding="UTF-8"?>
<depthProf xmlns="http://nemu.web.psi.ch/musrfit/depthProf">
<comment>
TrimSp information
</comment>
<trim_sp>
<data_path>./TRIMSP/</data_path>
<rge_fln_pre>SiC_1300x_52nm_48nm_E</rge_fln_pre>
<energy_vect start="1000" stop="22000" step="1000"/>
</trim_sp>
</depthProf>

View File

@ -1,55 +0,0 @@
n/a
###############################################################
FITPARAMETER
# Nr. Name Value Step Pos_Error Boundaries
1 f1 0.11295 -0.00071 0.00071 0 1
2 f2 0.06790 -0.00078 0.00078
3 x1 107.83 0.17 none
###############################################################
THEORY
userFcn libPDepthProfile PDepthProfile 1 2 3
###############################################################
RUN data/Si10_260K_Escan_100GTF_withDiaFrac MUE4 PSI DAT (name beamline institute data-file-format)
fittype 8 (non muSR fit)
map 0 0 0 0 0 0 0 0 0 0
xy-data dataE Asy
fit 5 22
packing 1
###############################################################
COMMANDS
MINIMIZE
#HESSE
MINOS
SAVE
###############################################################
PLOT 8 (non muSR plot)
runs 1
range 5 25
###############################################################
STATISTIC --- 2023-02-16 15:35:37
chisq = 18.8, NDF = 8, chisq/NDF = 2.354740

View File

@ -1,55 +0,0 @@
n/a
###############################################################
FITPARAMETER
# Nr. Name Value Step Pos_Error Boundaries
1 f1 0.49635 0.00035 none 0 1
2 f2 0.26714 0.00057 none
3 x1 107.4 3.3 none
###############################################################
THEORY
userFcn libPDepthProfile PDepthProfile 1 2 3
###############################################################
RUN data/Si10_260K_Escan_100GTF_withDiaFrac MUE4 PSI DAT (name beamline institute data-file-format)
fittype 8 (non muSR fit)
map 0 0 0 0 0 0 0 0 0 0
xy-data dataE DiaFrac
fit 5 22
packing 1
###############################################################
COMMANDS
MINIMIZE
#HESSE
MINOS
SAVE
###############################################################
PLOT 8 (non muSR plot)
runs 1
range 0 25
###############################################################
STATISTIC --- 2023-02-16 15:47:33
chisq = 13.2, NDF = 8, chisq/NDF = 1.645757

View File

@ -1,54 +0,0 @@
DEPTH PARTICLES
5. 99
15. 225
25. 275
35. 306
45. 345
55. 396
65. 419
75. 480
85. 478
95. 478
105. 510
115. 501
125. 505
135. 487
145. 456
155. 425
165. 389
175. 400
185. 330
195. 299
205. 252
215. 218
225. 191
235. 144
245. 112
255. 84
265. 76
275. 53
285. 36
295. 25
305. 24
315. 11
325. 6
335. 4
345. 3
355. 0
365. 0
375. 1
385. 0
395. 0
405. 0
415. 0
425. 0
435. 0
445. 0
455. 0
465. 0
475. 0
485. 0
495. 0
505. 0
515. 0
525. 0

View File

@ -1,135 +0,0 @@
DEPTH PARTICLES
5. 1
15. 2
25. 2
35. 0
45. 1
55. 0
65. 3
75. 3
85. 4
95. 7
105. 5
115. 4
125. 2
135. 3
145. 3
155. 7
165. 9
175. 4
185. 7
195. 4
205. 5
215. 9
225. 5
235. 8
245. 6
255. 6
265. 7
275. 13
285. 11
295. 12
305. 15
315. 10
325. 11
335. 13
345. 18
355. 16
365. 13
375. 21
385. 21
395. 21
405. 18
415. 18
425. 20
435. 18
445. 25
455. 25
465. 28
475. 38
485. 32
495. 38
505. 33
515. 47
525. 33
535. 36
545. 67
555. 52
565. 49
575. 59
585. 69
595. 88
605. 73
615. 85
625. 84
635. 92
645. 81
655. 102
665. 129
675. 132
685. 131
695. 137
705. 143
715. 153
725. 166
735. 157
745. 193
755. 210
765. 203
775. 205
785. 208
795. 241
805. 249
815. 227
825. 255
835. 278
845. 277
855. 267
865. 303
875. 297
885. 267
895. 316
905. 325
915. 303
925. 283
935. 257
945. 296
955. 254
965. 212
975. 221
985. 167
995. 178
1005. 145
1015. 145
1025. 98
1035. 71
1045. 76
1055. 45
1065. 37
1075. 26
1085. 12
1095. 12
1105. 3
1115. 4
1125. 1
1135. 1
1145. 0
1155. 1
1165. 0
1175. 0
1185. 0
1195. 0
1205. 0
1215. 0
1225. 0
1235. 0
1245. 0
1255. 0
1265. 0
1275. 0
1285. 0
1295. 0
1305. 0
1315. 0
1325. 0
1335. 0

View File

@ -1,144 +0,0 @@
DEPTH PARTICLES
5. 1
15. 4
25. 1
35. 2
45. 3
55. 2
65. 2
75. 5
85. 3
95. 4
105. 1
115. 1
125. 1
135. 3
145. 3
155. 3
165. 4
175. 6
185. 5
195. 4
205. 3
215. 1
225. 3
235. 7
245. 6
255. 8
265. 7
275. 7
285. 5
295. 3
305. 11
315. 11
325. 6
335. 8
345. 15
355. 15
365. 13
375. 10
385. 11
395. 17
405. 18
415. 17
425. 14
435. 19
445. 15
455. 17
465. 17
475. 22
485. 18
495. 31
505. 27
515. 33
525. 30
535. 33
545. 21
555. 31
565. 43
575. 38
585. 36
595. 26
605. 56
615. 46
625. 55
635. 63
645. 66
655. 68
665. 72
675. 68
685. 89
695. 99
705. 93
715. 99
725. 105
735. 113
745. 116
755. 117
765. 126
775. 130
785. 135
795. 163
805. 133
815. 179
825. 183
835. 187
845. 172
855. 224
865. 227
875. 245
885. 277
895. 268
905. 266
915. 269
925. 285
935. 249
945. 294
955. 241
965. 310
975. 279
985. 298
995. 297
1005. 245
1015. 283
1025. 222
1035. 247
1045. 204
1055. 214
1065. 235
1075. 189
1085. 146
1095. 128
1105. 96
1115. 77
1125. 56
1135. 57
1145. 27
1155. 17
1165. 12
1175. 5
1185. 5
1195. 3
1205. 1
1215. 0
1225. 0
1235. 0
1245. 0
1255. 0
1265. 0
1275. 0
1285. 0
1295. 0
1305. 0
1315. 0
1325. 0
1335. 0
1345. 0
1355. 0
1365. 0
1375. 0
1385. 0
1395. 0
1405. 0
1415. 0
1425. 0

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