773 Commits

Author SHA1 Message Date
dbfeeddf3f Remove automake support
Since the cmake tool chain is now stable, the automake tool chain is removed from musrfit.
This makes documentation and code less cluttered.
2019-03-08 12:50:41 +01:00
Zaher Salman
dcfa461537 Merged master into beta-NMR 2019-02-19 08:43:38 +01:00
Zaher Salman
414165bc90 Merged muonspin/musrfit:root6 into master 2019-02-19 08:42:19 +01:00
3cb950277f cmake/cpack root dictionary issue fixed.
In order that package assembly works, the code needs to be relocatble
and any hints linking it to the original source need to be absent.
The changes here do exactely this. For rootcling the '-inlineInputHeader'
option is needed, otherwise the dictionary wants to load the header
file from the source destination which of course will fail when installing
the package on a machine without the source.
2019-02-01 16:05:24 +01:00
Zaher Salman
7307406d05 Merged master into beta-NMR 2019-01-25 13:06:05 +01:00
Zaher Salman
592b0cfc42 Merged muonspin/musrfit:root6 into master 2019-01-22 09:26:02 +01:00
c7e35dfdff Make so far undocumented functions ifgk and ifll public and at the same time properly normalize them. 2019-01-18 10:35:26 +01:00
Zaher Salman
d1cf374354 Merged master into beta-NMR 2018-12-18 10:01:28 +01:00
Zaher Salman
e0eaa3efb5 Merged muonspin/musrfit:root6 into master 2018-12-12 17:26:44 +01:00
c6766864d9 AddT0 offset bug
Up to now there has been an addT0 offset bug which resulted to the following situation.
Since the offset was wrong by '1', for the first addt0 the t0 of the file was used
instead of the one given in the msr-file. If these t0's are substantially different, the
adding of the runs was quite off, resulting in strong distortions at very early times.
Pant Amba Datt pointed towards this bug which is fixed now.
2018-12-11 13:59:58 +01:00
Zaher Salman
8a7e96a8f7 Merged muonspin/musrfit:root6 into master 2018-11-30 08:51:19 +01:00
7361dc6f70 Fourier relative phase: bug fix
The reference phase for real Fourier was accidentely counted twice.
2018-11-29 10:56:37 +01:00
Zaher Salman
42bb8a49b7 Merged muonspin/musrfit:root6 into master 2018-11-15 10:08:36 +01:00
71f8f78b63 set reference phase index in the case of a phase vector 2018-11-13 08:39:26 +01:00
3c55a72475 allow to define the phase parameter lists in the Fourier block with a reference phase parameter. This means all the other phase parameters are then relative to this reference phase parameter. This is often used when analysing LEM data. 2018-11-12 20:35:10 +01:00
Zaher Salman
acdfa60870 Merged muonspin/musrfit:root6 into master 2018-10-29 09:21:29 +01:00
476e2b49d6 make sure that enough relevant digits of the parameters are exported to the db/dat-file. 2018-10-26 14:26:04 +02:00
Zaher Salman
e702049b50 Merged muonspin/musrfit:root6 into master 2018-10-24 16:27:04 +02:00
nemu
e34228da08 added missing header. 2018-10-24 11:34:14 +02:00
34dd954613 increased the export precision. This is a quick and dirty fix only. 2018-10-23 16:00:54 +02:00
Zaher Salman
d05a858e7e Merged muonspin/musrfit:root6 into master 2018-10-16 10:04:36 +02:00
5909d59f32 allow multiple Fourier phase parameters for phase shifted real Fourier. Autophasing still missing. 2018-10-15 16:09:17 +02:00
92d1f0145c Resolve conflict with Andreas' musrfit 2018-10-15 10:25:15 +02:00
nemu
2a848ed5f3 make sure that BOOST is found even if installed in any non-standard path. 2018-08-27 15:46:48 +02:00
Zaher Salman
e19289d0c3 Cleanup 2018-08-25 23:51:08 +02:00
Zaher Salman
8c2537efae Estimate alpha for beta-NMR asymmetry calculation from the ratio of B/F counts if no alpha line is given in the run block. 2018-08-25 23:06:57 +02:00
f81c6aa2bf Deal with missing alpha line for beta-NMR. 2018-08-24 17:42:23 +02:00
b5f5d26e9c Added estimation for the value of alpha from integrated counts. 2018-08-24 14:08:28 +02:00
dfea8334b7 Possible fix for alpha problem for beta-NMR asymmetry calculation. To be tested. 2018-08-24 13:03:28 +02:00
b8dc67fa1a Fix x-axis label bug (reported by Gerland Morris). 2018-08-21 10:32:57 +02:00
e9ec126d9e Beta-NMR helicity subtraction seems to work in the new class. Still needs debugging and tests. Some of the changes from Jonas were reverted since SExp does not work otherwise. 2018-08-20 17:51:39 +02:00
Zaher Salman
782451e825 Start substract asymmetry implementation. 2018-08-19 23:37:48 +02:00
Zaher Salman
e5c1450fc8 Fixed chisqr calculation bug in BNMR 2018-08-18 23:45:28 +02:00
758f338972 First working duplicate asymmetry class for beta-NMR. 2018-08-17 16:08:04 +02:00
Zaher Salman
b044d97a55 More work towards implementation of beta-NMR asymmetry calculation 2018-08-16 23:17:39 +02:00
Zaher Salman
4e54d9c0b9 First successful compilation of AsymmetryBNMR 2018-08-15 21:35:56 +02:00
Zaher Salman
e2a59af6e1 Start branch to develop full featured beta-NMR support 2018-08-15 20:35:06 +02:00
Zaher Salman
b56e5adce6 Merged muonspin/musrfit:root6 into master 2018-07-05 13:30:32 +02:00
55b5788506 added MODULE to root_generate_dictionary in order to get the proper name scheme. 2018-06-28 13:17:43 +02:00
Zaher Salman
0593f7c150 Merged muonspin/musrfit:root6 into master 2018-06-09 10:18:16 +02:00
4a881fad56 cleaned up signed/unsigned int issues. 2018-06-06 16:04:27 +02:00
a756a2def4 cmake: got rid of target_compile_options which are better controlled by the build type. 2018-06-06 12:59:18 +02:00
25b59ab473 slight performance increase. 2018-06-06 12:54:54 +02:00
57b7c52865 cmake: added -O2 which gives the performance improvement needed. 2018-06-05 07:59:24 +02:00
cd82c613aa added missing header files. 2018-06-04 09:34:10 +02:00
99e8eb9769 cmake: added library version information to the targets. 2018-06-02 12:41:13 +02:00
9bdb8ec2ec make sure that older cmake versions (<= 3.8) inject the right linker flags for OpenMP. 2018-05-07 13:02:22 +02:00
aa34efb0a8 add nonlocal sc support via cmake. 2018-05-05 21:02:48 +02:00
9bf47a2690 some first cmake tuning for macOS. 2018-05-05 16:47:11 +02:00
42086350e7 add FFTW3 path if not present in the standard search paths. This is needed for macOS with macport. 2018-05-05 12:37:52 +02:00