LMU/musrfit
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Author SHA1 Message Date
suter_a 38d4ec1806 read 'Sample Orientation' from ROOT file, since it might be needed by any2many. 2025-03-18 12:51:40 +01:00
suter_a 4231d26604 make sure that the 'selected' object is present. 2025-02-24 20:22:20 +01:00
suter_a a28650f017 this is a workaround which should prevent that the key event is executed if a text/latex is written into the canvas. 2025-02-17 17:53:39 +01:00
suter_a 9a23c4f241 fix of a copy/paste error. 2025-02-15 10:41:02 +01:00
suter_a 5f7f79e46d header of exported data adopted for easier read in with pandas. 2025-02-14 09:06:55 +01:00
suter_a 4a20d805dd updated the copyright info. 2025-01-30 11:15:42 +01:00
suter_a 10cfe3f863 Merge branch 'root6' of https://git.psi.ch/nemu/musrfit into root6 2025-01-29 08:05:29 +01:00
suter_a 0828d1b8d4 proper handling of comments and descriptions in the RUN block. 2025-01-29 08:04:48 +01:00
suter_a 75785d2c0e add switch to enable/disable HDF4 support for NeXus. 2025-01-28 21:40:58 +01:00
suter_a e4b84b12df make sure that 'ASCII', 'DAT', and 'DB' is rejected from musrFT. 2025-01-27 18:00:32 +01:00
suter_a 124a31386c add a new tag PMUSR_UNSUPPORTED_FEATURE 2025-01-27 17:58:42 +01:00
suter_a ebdb0feb7f path-run-name in RUN block of the msr-file can now handle spaces. v1.9.7 2025-01-18 13:35:08 +01:00
ext-mcfadd_randsuter_a e67d92fc05 Merged in mnstrategy (pull request #19) 
Explicit passing of MnStrategy during minimizer initialization

Approved-by: Suter Andreas
 2025-01-10 10:00:30 +00:00
ext-mcfadd_r ead1674b13 Explicit passing of MnStrategy during minimizer initialization 
This patch fixes compilation errors that arise with recent ROOT versions (e.g., 6.34.02),
which require a ROOT::Minuit2::MnStrategy object to be passed when initializing the
ROOT::Minuit2::MnX (X = Migrad, Simplex, Minimize) minimizers (i.e., instead of the integer
representing the "strategy").
 2025-01-09 11:38:33 -08:00
suter_a fd22884ce8 slightly re-ordered the default files for mupp in the open dialog. 2024-12-16 07:41:24 +01:00
suter_a 20dd08fbef changed default ROOT color kGreen to kGreen+2. 2024-12-14 14:54:17 +01:00
suter_a 3e66760c26 adopted for custom button handling qt5. 2024-12-11 14:06:32 +01:00
suter_a d6bcdf52b8 adopted for custom button handling. 2024-12-11 13:58:11 +01:00
suter_a 30bd2b2876 added missing enum tag. 2024-12-11 09:36:57 +01:00
suter_a 9f8f89db6d make the theme handling in musredit more flexible. At the same time adopted some part to more modern c++. 2024-12-11 09:25:28 +01:00
suter_a 458913ca31 update of the ChangeLog 2024-12-03 18:13:02 +01:00
suter_a 5c3accc6ed added jump to block feature. v1.9.6 2024-12-02 20:05:50 +01:00
suter_a 6f8b0a2341 center edit widget for find. This gives a better user experience. 2024-12-02 17:06:02 +01:00
suter_a 4febdb42b4 make sure that for non-muSR data errors are not = 0. Will set it to 1, and issue a warning. This prevents chisq to crash. 2024-10-14 12:22:25 +02:00
suter_a ae95a5dc1c implemented unary operator for metaData in functions. 2024-10-11 16:34:49 +02:00
suter_a c3f531e0d5 fixed a bug for out-of-repo build to generate git-info. 2024-10-11 08:19:54 +02:00
suter_a 0b61130e28 adopted OpenMP handling for libZFRelaxation. 2024-09-23 09:41:20 +02:00
suter_a d1cd63dcb0 fixed a bug in the mupp gui refresh of a collection. 2024-09-21 13:02:31 +02:00
suter_a 7838901fbe make sure that the run template number has at least 4 digits before proceeding. 2024-09-17 16:27:04 +02:00
suter_a 00b012d0dd Merge https://bitbucket.org/muonspin/musrfit into root6 2024-09-12 09:29:03 +02:00
ext-mcfadd_randsuter_a d2984d8923 Merged in avg (pull request #18) 
fix batch mode averaged output

Approved-by: Andreas Suter
 2024-09-12 07:28:15 +00:00
ext-mcfadd_r 58889614e5 fix batch mode averaged output 
closes issue #63
 2024-09-10 13:52:30 -07:00
suter_a c9fc373862 improved dat-file reading for mupp. 2024-07-02 09:26:44 +02:00
suter_a ebefcf7af9 updated the docu. 2024-06-24 09:44:07 +02:00
suter_a 64d3b6192b added the option to write the content of the MINUIT2.OUTPUT ascii file as yaml. This extends the previous commit from Ryan M.L. McFadden. v1.9.5 2024-06-18 11:16:15 +02:00
suter_a 6bcb26f9d5 Merge branch 'root6' of https://bitbucket.org/muonspin/musrfit into root6 2024-06-18 08:19:01 +02:00
ext-mcfadd_randsuter_a 6b865efd3b Merged in ignore (pull request #17) 
ignore all files generated from an in-repo build

Approved-by: Andreas Suter
 2024-06-18 06:18:56 +00:00
ext-mcfadd_randsuter_a caccfb175a Merged in yaml (pull request #16) 
write the fit results to an easy-to-read/parse yaml file

Approved-by: Andreas Suter
 2024-06-18 06:18:31 +00:00
ext-mcfadd_randsuter_a 1845b5c176 Merged in segfault (pull request #15) 
fix segfault

Approved-by: Andreas Suter
 2024-06-18 06:18:14 +00:00
ext-mcfadd_r 8821112927 ignore all files generated from an in-repo build 2024-06-17 13:07:06 -03:00
ext-mcfadd_r 833171c712 write the fit results to an easy-to-read/parse yaml file 
This patch adds routines for writing a comprehensive set of fit results (i.e., parameter values, parabolic errors, asymmetric errors, covariances, correlation coefficients, etc.) for an individual `.msr` file to an easy-to-read/parse `.yaml` file.

The main motivation for the code addition is to provide users with easy access to the fit's covariance matrix without the need for "extra" manual effort (e.g., parsing the contents of `MINUIT2.OUTPUT` or `MINUIT2.root`). The other fit quantities are also included for completeness.

Reading/accessing the output is trivial using, for example, the PyYAML Python library (https://github.com/yaml/pyyaml):

```python
import yaml

with open("2125_tf_histo.yaml", "r") as fh:
	results = yaml.load(fh, Loader=yaml.SafeLoader)

cov = results["covariance"]["Field_1"]["Sigma_1"]
```

Note: the naming conventions chosen for the blocks in the `.yaml` output closely follow those used by the iminuit Python library (https://github.com/scikit-hep/iminuit).
 2024-06-17 12:51:04 -03:00
ext-mcfadd_r 61749b91c4 fix segfault 
This patch provides a memory-safe alternative to the changes introduced in commit 418adfde67, which causes a segfault when the "batch mode" flag is required (i.e., for ascii/graphic export).

Note: the program name (i.e., argv[0]) has been added the list arguments passed to ROOT's TApplication. This ensures that the TApplication name matches that of the program (see https://github.com/root-project/root/blob/542b98b2ccca760fd83117b750b89d81b8e9b926/core/base/src/TApplication.cxx#L179-L180).
 2024-06-17 10:52:14 -03:00
suter_a 3d92e2eefb add CPU info to the configure process. 2024-06-09 17:45:02 +02:00
suter_a b71dce9291 remove more accidently added file. 2024-06-08 16:39:57 +02:00
suter_a 1aa4ce0a99 remove accidentely added file. 2024-06-08 16:36:54 +02:00
suter_a 425ed02e22 update of the docu. 2024-06-08 09:23:36 +02:00
suter_a a36abfc461 updated version info, due to the macOS OpenMP support. 2024-06-08 09:17:05 +02:00
suter_a ccaba41868 modernize the way how to check/deal with OpenMP. This helps also on the macOS side. v1.9.4 2024-06-07 12:44:59 +02:00
suter_a 418adfde67 propagate only necessary root flags to TApplication. 2024-06-06 10:06:50 +02:00
suter_a 66df43c663 moved mupp examples form the mupp source destination to doc/examples. 2024-04-26 15:54:44 +02:00