update of doku for the dks6 branch.

doc/html/.buildinfo

@@ -1,4 +0,0 @@
-# Sphinx build info version 1
-# This file hashes the configuration used when building these files. When it is not found, a full rebuild will be done.
-config: 3b34bde782d0a2e964b32bc698e5a292
-tags: 645f666f9bcd5a90fca523b33c5a78b7

doc/html/_downloads/Makefile.TMyLibrary

@@ -0,0 +1,60 @@
+#---------------------------------------------------
+# get compilation flags from root-config
+
+ROOTCFLAGS    = $(shell $(ROOTSYS)/bin/root-config --cflags)
+
+#---------------------------------------------------
+
+OS            = LINUX
+CXX           = g++
+CXXFLAGS      = -O3 -Wall -Wno-trigraphs -fPIC
+LOCALINCLUDE  = .
+ROOTINCLUDE   = $(ROOTSYS)/include
+INCLUDES      = -I$(LOCALINCLUDE) -I$(ROOTINCLUDE)
+LD            = g++
+LDFLAGS       =
+SOFLAGS       = -O -shared
+
+# the output from the root-config script:
+CXXFLAGS      += $(ROOTCFLAGS)
+LDFLAGS       +=
+
+# some definitions: headers (used to generate *Dict* stuff), sources, objects,...
+OBJS =
+OBJS += TMyFunction.o TMyLibraryDict.o
+
+SHLIB = libTMyLibrary.so
+
+# make the shared lib:
+#
+all:  $(SHLIB)
+
+$(SHLIB): $(OBJS)
+	@echo "---> Building shared library $(SHLIB) ..."
+	/bin/rm -f $(SHLIB)
+	$(LD) $(OBJS) $(SOFLAGS) -o $(SHLIB)
+	@echo "done"
+
+# clean up: remove all object file (and core files)
+# semicolon needed to tell make there is no source
+# for this target!
+#
+clean:; 	@rm -f $(OBJS) *Dict* core*
+	@echo "---> removing $(OBJS)"
+
+#
+$(OBJS): %.o: %.cpp
+	$(CXX) $(INCLUDES) $(CXXFLAGS) -c $<
+
+# Generate the ROOT CINT dictionary
+
+TMyLibraryDict.cpp: TMyFunction.h TMyLibraryLinkDef.h
+	@echo "Generating dictionary $@..."
+	rootcint -f $@ -c -p -I$(ROOTINCLUDE) $^
+
+install: all
+	@echo "Installing shared lib: libTApproximation.so"
+ifeq ($(OS),LINUX)
+	cp -pv $(SHLIB) $(ROOTSYS)/lib
+	cp -pv $(LOCALINCLUDE)/*.h $(ROOTSYS)/include
+endif

doc/html/_static/haiku.css

@@ -0,0 +1,371 @@
+/*
+ * haiku.css_t
+ * ~~~~~~~~~~~
+ *
+ * Sphinx stylesheet -- haiku theme.
+ *
+ * Adapted from http://haiku-os.org/docs/Haiku-doc.css.
+ * Original copyright message:
+ *
+ *     Copyright 2008-2009, Haiku. All rights reserved.
+ *     Distributed under the terms of the MIT License.
+ *
+ *     Authors:
+ *              Francois Revol <revol@free.fr>
+ *              Stephan Assmus <superstippi@gmx.de>
+ *              Braden Ewing <brewin@gmail.com>
+ *              Humdinger <humdingerb@gmail.com>
+ *
+ * :copyright: Copyright 2007-2014 by the Sphinx team, see AUTHORS.
+ * :license: BSD, see LICENSE for details.
+ *
+ */
+
+@import url("basic.css");
+
+html {
+    margin: 0px;
+    padding: 0px;
+    background: #FFF url(bg-page.png) top left repeat-x;
+}
+
+body {
+    line-height: 1.5;
+    margin: auto;
+    padding: 0px;
+    font-family: "DejaVu Sans", Arial, Helvetica, sans-serif;
+    min-width: 59em;
+    max-width: 70em;
+    color: #333333;
+}
+
+div.footer {
+    padding: 8px;
+    font-size: 11px;
+    text-align: center;
+    letter-spacing: 0.5px;
+}
+
+/* link colors and text decoration */
+
+a:link {
+    font-weight: bold;
+    text-decoration: none;
+    color: #dc3c01;
+}
+
+a:visited {
+    font-weight: bold;
+    text-decoration: none;
+    color: #892601;
+}
+
+a:hover, a:active {
+    text-decoration: underline;
+    color: #ff4500;
+}
+
+/* Some headers act as anchors, don't give them a hover effect */
+
+h1 a:hover, a:active {
+    text-decoration: none;
+    color: #0c3762;
+}
+
+h2 a:hover, a:active {
+    text-decoration: none;
+    color: #0c3762;
+}
+
+h3 a:hover, a:active {
+    text-decoration: none;
+    color: #0c3762;
+}
+
+h4 a:hover, a:active {
+    text-decoration: none;
+    color: #0c3762;
+}
+
+a.headerlink {
+    color: #a7ce38;
+    padding-left: 5px;
+}
+
+a.headerlink:hover {
+    color: #a7ce38;
+}
+
+/* basic text elements */
+
+div.content {
+    margin-top: 20px;
+    margin-left: 40px;
+    margin-right: 40px;
+    margin-bottom: 50px;
+    font-size: 0.9em;
+}
+
+/* heading and navigation */
+
+div.header {
+    position: relative;
+    left: 0px;
+    top: 0px;
+    height: 85px;
+    /* background: #eeeeee; */
+    padding: 0 40px;
+}
+div.header h1 {
+    font-size: 1.6em;
+    font-weight: normal;
+    letter-spacing: 1px;
+    color: #0c3762;
+    border: 0;
+    margin: 0;
+    padding-top: 15px;
+}
+div.header h1 a {
+    font-weight: normal;
+    color: #0c3762;
+}
+div.header h2 {
+    font-size: 1.3em;
+    font-weight: normal;
+    letter-spacing: 1px;
+    text-transform: uppercase;
+    color: #aaa;
+    border: 0;
+    margin-top: -3px;
+    padding: 0;
+}
+
+div.header img.rightlogo {
+    float: right;
+}
+
+
+div.title {
+    font-size: 1.3em;
+    font-weight: bold;
+    color: #0c3762;
+    border-bottom: dotted thin #e0e0e0;
+    margin-bottom: 25px;
+}
+div.topnav {
+    /* background: #e0e0e0; */
+}
+div.topnav p {
+    margin-top: 0;
+    margin-left: 40px;
+    margin-right: 40px;
+    margin-bottom: 0px;
+    text-align: right;
+    font-size: 0.8em;
+}
+div.bottomnav {
+    background: #eeeeee;
+}
+div.bottomnav p {
+    margin-right: 40px;
+    text-align: right;
+    font-size: 0.8em;
+}
+
+a.uplink {
+    font-weight: normal;
+}
+
+
+/* contents box */
+
+table.index {
+    margin: 0px 0px 30px 30px;
+    padding: 1px;
+    border-width: 1px;
+    border-style: dotted;
+    border-color: #e0e0e0;
+}
+table.index tr.heading {
+    background-color: #e0e0e0;
+    text-align: center;
+    font-weight: bold;
+    font-size: 1.1em;
+}
+table.index tr.index {
+    background-color: #eeeeee;
+}
+table.index td {
+    padding: 5px 20px;
+}
+
+table.index a:link, table.index a:visited {
+    font-weight: normal;
+    text-decoration: none;
+    color: #dc3c01;
+}
+table.index a:hover, table.index a:active {
+    text-decoration: underline;
+    color: #ff4500;
+}
+
+
+/* Haiku User Guide styles and layout */
+
+/* Rounded corner boxes */
+/* Common declarations */
+div.admonition {
+    -webkit-border-radius: 10px;
+    -khtml-border-radius: 10px;
+    -moz-border-radius: 10px;
+    border-radius: 10px;
+    border-style: dotted;
+    border-width: thin;
+    border-color: #dcdcdc;
+    padding: 10px 15px 10px 15px;
+    margin-bottom: 15px;
+    margin-top: 15px;
+}
+div.note {
+    padding: 10px 15px 10px 80px;
+    background: #e4ffde url(alert_info_32.png) 15px 15px no-repeat;
+    min-height: 42px;
+}
+div.warning {
+    padding: 10px 15px 10px 80px;
+    background: #fffbc6 url(alert_warning_32.png) 15px 15px no-repeat;
+    min-height: 42px;
+}
+div.seealso {
+    background: #e4ffde;
+}
+
+/* More layout and styles */
+h1 {
+    font-size: 1.3em;
+    font-weight: bold;
+    color: #0c3762;
+    border-bottom: dotted thin #e0e0e0;
+    margin-top: 30px;
+}
+
+h2 {
+    font-size: 1.2em;
+    font-weight: normal;
+    color: #0c3762;
+    border-bottom: dotted thin #e0e0e0;
+    margin-top: 30px;
+}
+
+h3 {
+    font-size: 1.1em;
+    font-weight: normal;
+    color: #0c3762;
+    margin-top: 30px;
+}
+
+h4 {
+    font-size: 1.0em;
+    font-weight: normal;
+    color: #0c3762;
+    margin-top: 30px;
+}
+
+p {
+    text-align: justify;
+}
+
+p.last {
+    margin-bottom: 0;
+}
+
+ol {
+    padding-left: 20px;
+}
+
+ul {
+    padding-left: 5px;
+    margin-top: 3px;
+}
+
+li {
+    line-height: 1.3;
+}
+
+div.content ul > li {
+    -moz-background-clip:border;
+    -moz-background-inline-policy:continuous;
+    -moz-background-origin:padding;
+    background: transparent url(bullet_orange.png) no-repeat scroll left 0.45em;
+    list-style-image: none;
+    list-style-type: none;
+    padding: 0 0 0 1.666em;
+    margin-bottom: 3px;
+}
+
+td {
+    vertical-align: top;
+}
+
+tt {
+    background-color: #e2e2e2;
+    font-size: 1.0em;
+    font-family: monospace;
+}
+
+pre {
+    border-color: #0c3762;
+    border-style: dotted;
+    border-width: thin;
+    margin: 0 0 12px 0;
+    padding: 0.8em;
+    background-color: #f0f0f0;
+}
+
+hr {
+    border-top: 1px solid #ccc;
+    border-bottom: 0;
+    border-right: 0;
+    border-left: 0;
+    margin-bottom: 10px;
+    margin-top: 20px;
+}
+
+/* printer only pretty stuff */
+@media print {
+    .noprint {
+        display: none;
+    }
+    /* for acronyms we want their definitions inlined at print time */
+    acronym[title]:after {
+        font-size: small;
+        content: " (" attr(title) ")";
+        font-style: italic;
+    }
+    /* and not have mozilla dotted underline */
+    acronym {
+        border: none;
+    }
+    div.topnav, div.bottomnav, div.header, table.index {
+        display: none;
+    }
+    div.content {
+        margin: 0px;
+        padding: 0px;
+    }
+    html {
+        background: #FFF;
+    }
+}
+
+.viewcode-back {
+    font-family: "DejaVu Sans", Arial, Helvetica, sans-serif;
+}
+
+div.viewcode-block:target {
+    background-color: #f4debf;
+    border-top: 1px solid #ac9;
+    border-bottom: 1px solid #ac9;
+    margin: -1px -10px;
+    padding: 0 12px;
+}

doc/html/_static/websupport.js

@@ -0,0 +1,808 @@
+/*
+ * websupport.js
+ * ~~~~~~~~~~~~~
+ *
+ * sphinx.websupport utilties for all documentation.
+ *
+ * :copyright: Copyright 2007-2014 by the Sphinx team, see AUTHORS.
+ * :license: BSD, see LICENSE for details.
+ *
+ */
+
+(function($) {
+  $.fn.autogrow = function() {
+    return this.each(function() {
+    var textarea = this;
+
+    $.fn.autogrow.resize(textarea);
+
+    $(textarea)
+      .focus(function() {
+        textarea.interval = setInterval(function() {
+          $.fn.autogrow.resize(textarea);
+        }, 500);
+      })
+      .blur(function() {
+        clearInterval(textarea.interval);
+      });
+    });
+  };
+
+  $.fn.autogrow.resize = function(textarea) {
+    var lineHeight = parseInt($(textarea).css('line-height'), 10);
+    var lines = textarea.value.split('\n');
+    var columns = textarea.cols;
+    var lineCount = 0;
+    $.each(lines, function() {
+      lineCount += Math.ceil(this.length / columns) || 1;
+    });
+    var height = lineHeight * (lineCount + 1);
+    $(textarea).css('height', height);
+  };
+})(jQuery);
+
+(function($) {
+  var comp, by;
+
+  function init() {
+    initEvents();
+    initComparator();
+  }
+
+  function initEvents() {
+    $('a.comment-close').live("click", function(event) {
+      event.preventDefault();
+      hide($(this).attr('id').substring(2));
+    });
+    $('a.vote').live("click", function(event) {
+      event.preventDefault();
+      handleVote($(this));
+    });
+    $('a.reply').live("click", function(event) {
+      event.preventDefault();
+      openReply($(this).attr('id').substring(2));
+    });
+    $('a.close-reply').live("click", function(event) {
+      event.preventDefault();
+      closeReply($(this).attr('id').substring(2));
+    });
+    $('a.sort-option').live("click", function(event) {
+      event.preventDefault();
+      handleReSort($(this));
+    });
+    $('a.show-proposal').live("click", function(event) {
+      event.preventDefault();
+      showProposal($(this).attr('id').substring(2));
+    });
+    $('a.hide-proposal').live("click", function(event) {
+      event.preventDefault();
+      hideProposal($(this).attr('id').substring(2));
+    });
+    $('a.show-propose-change').live("click", function(event) {
+      event.preventDefault();
+      showProposeChange($(this).attr('id').substring(2));
+    });
+    $('a.hide-propose-change').live("click", function(event) {
+      event.preventDefault();
+      hideProposeChange($(this).attr('id').substring(2));
+    });
+    $('a.accept-comment').live("click", function(event) {
+      event.preventDefault();
+      acceptComment($(this).attr('id').substring(2));
+    });
+    $('a.delete-comment').live("click", function(event) {
+      event.preventDefault();
+      deleteComment($(this).attr('id').substring(2));
+    });
+    $('a.comment-markup').live("click", function(event) {
+      event.preventDefault();
+      toggleCommentMarkupBox($(this).attr('id').substring(2));
+    });
+  }
+
+  /**
+   * Set comp, which is a comparator function used for sorting and
+   * inserting comments into the list.
+   */
+  function setComparator() {
+    // If the first three letters are "asc", sort in ascending order
+    // and remove the prefix.
+    if (by.substring(0,3) == 'asc') {
+      var i = by.substring(3);
+      comp = function(a, b) { return a[i] - b[i]; };
+    } else {
+      // Otherwise sort in descending order.
+      comp = function(a, b) { return b[by] - a[by]; };
+    }
+
+    // Reset link styles and format the selected sort option.
+    $('a.sel').attr('href', '#').removeClass('sel');
+    $('a.by' + by).removeAttr('href').addClass('sel');
+  }
+
+  /**
+   * Create a comp function. If the user has preferences stored in
+   * the sortBy cookie, use those, otherwise use the default.
+   */
+  function initComparator() {
+    by = 'rating'; // Default to sort by rating.
+    // If the sortBy cookie is set, use that instead.
+    if (document.cookie.length > 0) {
+      var start = document.cookie.indexOf('sortBy=');
+      if (start != -1) {
+        start = start + 7;
+        var end = document.cookie.indexOf(";", start);
+        if (end == -1) {
+          end = document.cookie.length;
+          by = unescape(document.cookie.substring(start, end));
+        }
+      }
+    }
+    setComparator();
+  }
+
+  /**
+   * Show a comment div.
+   */
+  function show(id) {
+    $('#ao' + id).hide();
+    $('#ah' + id).show();
+    var context = $.extend({id: id}, opts);
+    var popup = $(renderTemplate(popupTemplate, context)).hide();
+    popup.find('textarea[name="proposal"]').hide();
+    popup.find('a.by' + by).addClass('sel');
+    var form = popup.find('#cf' + id);
+    form.submit(function(event) {
+      event.preventDefault();
+      addComment(form);
+    });
+    $('#s' + id).after(popup);
+    popup.slideDown('fast', function() {
+      getComments(id);
+    });
+  }
+
+  /**
+   * Hide a comment div.
+   */
+  function hide(id) {
+    $('#ah' + id).hide();
+    $('#ao' + id).show();
+    var div = $('#sc' + id);
+    div.slideUp('fast', function() {
+      div.remove();
+    });
+  }
+
+  /**
+   * Perform an ajax request to get comments for a node
+   * and insert the comments into the comments tree.
+   */
+  function getComments(id) {
+    $.ajax({
+     type: 'GET',
+     url: opts.getCommentsURL,
+     data: {node: id},
+     success: function(data, textStatus, request) {
+       var ul = $('#cl' + id);
+       var speed = 100;
+       $('#cf' + id)
+         .find('textarea[name="proposal"]')
+         .data('source', data.source);
+
+       if (data.comments.length === 0) {
+         ul.html('<li>No comments yet.</li>');
+         ul.data('empty', true);
+       } else {
+         // If there are comments, sort them and put them in the list.
+         var comments = sortComments(data.comments);
+         speed = data.comments.length * 100;
+         appendComments(comments, ul);
+         ul.data('empty', false);
+       }
+       $('#cn' + id).slideUp(speed + 200);
+       ul.slideDown(speed);
+     },
+     error: function(request, textStatus, error) {
+       showError('Oops, there was a problem retrieving the comments.');
+     },
+     dataType: 'json'
+    });
+  }
+
+  /**
+   * Add a comment via ajax and insert the comment into the comment tree.
+   */
+  function addComment(form) {
+    var node_id = form.find('input[name="node"]').val();
+    var parent_id = form.find('input[name="parent"]').val();
+    var text = form.find('textarea[name="comment"]').val();
+    var proposal = form.find('textarea[name="proposal"]').val();
+
+    if (text == '') {
+      showError('Please enter a comment.');
+      return;
+    }
+
+    // Disable the form that is being submitted.
+    form.find('textarea,input').attr('disabled', 'disabled');
+
+    // Send the comment to the server.
+    $.ajax({
+      type: "POST",
+      url: opts.addCommentURL,
+      dataType: 'json',
+      data: {
+        node: node_id,
+        parent: parent_id,
+        text: text,
+        proposal: proposal
+      },
+      success: function(data, textStatus, error) {
+        // Reset the form.
+        if (node_id) {
+          hideProposeChange(node_id);
+        }
+        form.find('textarea')
+          .val('')
+          .add(form.find('input'))
+          .removeAttr('disabled');
+	var ul = $('#cl' + (node_id || parent_id));
+        if (ul.data('empty')) {
+          $(ul).empty();
+          ul.data('empty', false);
+        }
+        insertComment(data.comment);
+        var ao = $('#ao' + node_id);
+        ao.find('img').attr({'src': opts.commentBrightImage});
+        if (node_id) {
+          // if this was a "root" comment, remove the commenting box
+          // (the user can get it back by reopening the comment popup)
+          $('#ca' + node_id).slideUp();
+        }
+      },
+      error: function(request, textStatus, error) {
+        form.find('textarea,input').removeAttr('disabled');
+        showError('Oops, there was a problem adding the comment.');
+      }
+    });
+  }
+
+  /**
+   * Recursively append comments to the main comment list and children
+   * lists, creating the comment tree.
+   */
+  function appendComments(comments, ul) {
+    $.each(comments, function() {
+      var div = createCommentDiv(this);
+      ul.append($(document.createElement('li')).html(div));
+      appendComments(this.children, div.find('ul.comment-children'));
+      // To avoid stagnating data, don't store the comments children in data.
+      this.children = null;
+      div.data('comment', this);
+    });
+  }
+
+  /**
+   * After adding a new comment, it must be inserted in the correct
+   * location in the comment tree.
+   */
+  function insertComment(comment) {
+    var div = createCommentDiv(comment);
+
+    // To avoid stagnating data, don't store the comments children in data.
+    comment.children = null;
+    div.data('comment', comment);
+
+    var ul = $('#cl' + (comment.node || comment.parent));
+    var siblings = getChildren(ul);
+
+    var li = $(document.createElement('li'));
+    li.hide();
+
+    // Determine where in the parents children list to insert this comment.
+    for(i=0; i < siblings.length; i++) {
+      if (comp(comment, siblings[i]) <= 0) {
+        $('#cd' + siblings[i].id)
+          .parent()
+          .before(li.html(div));
+        li.slideDown('fast');
+        return;
+      }
+    }
+
+    // If we get here, this comment rates lower than all the others,
+    // or it is the only comment in the list.
+    ul.append(li.html(div));
+    li.slideDown('fast');
+  }
+
+  function acceptComment(id) {
+    $.ajax({
+      type: 'POST',
+      url: opts.acceptCommentURL,
+      data: {id: id},
+      success: function(data, textStatus, request) {
+        $('#cm' + id).fadeOut('fast');
+        $('#cd' + id).removeClass('moderate');
+      },
+      error: function(request, textStatus, error) {
+        showError('Oops, there was a problem accepting the comment.');
+      }
+    });
+  }
+
+  function deleteComment(id) {
+    $.ajax({
+      type: 'POST',
+      url: opts.deleteCommentURL,
+      data: {id: id},
+      success: function(data, textStatus, request) {
+        var div = $('#cd' + id);
+        if (data == 'delete') {
+          // Moderator mode: remove the comment and all children immediately
+          div.slideUp('fast', function() {
+            div.remove();
+          });
+          return;
+        }
+        // User mode: only mark the comment as deleted
+        div
+          .find('span.user-id:first')
+          .text('[deleted]').end()
+          .find('div.comment-text:first')
+          .text('[deleted]').end()
+          .find('#cm' + id + ', #dc' + id + ', #ac' + id + ', #rc' + id +
+                ', #sp' + id + ', #hp' + id + ', #cr' + id + ', #rl' + id)
+          .remove();
+        var comment = div.data('comment');
+        comment.username = '[deleted]';
+        comment.text = '[deleted]';
+        div.data('comment', comment);
+      },
+      error: function(request, textStatus, error) {
+        showError('Oops, there was a problem deleting the comment.');
+      }
+    });
+  }
+
+  function showProposal(id) {
+    $('#sp' + id).hide();
+    $('#hp' + id).show();
+    $('#pr' + id).slideDown('fast');
+  }
+
+  function hideProposal(id) {
+    $('#hp' + id).hide();
+    $('#sp' + id).show();
+    $('#pr' + id).slideUp('fast');
+  }
+
+  function showProposeChange(id) {
+    $('#pc' + id).hide();
+    $('#hc' + id).show();
+    var textarea = $('#pt' + id);
+    textarea.val(textarea.data('source'));
+    $.fn.autogrow.resize(textarea[0]);
+    textarea.slideDown('fast');
+  }
+
+  function hideProposeChange(id) {
+    $('#hc' + id).hide();
+    $('#pc' + id).show();
+    var textarea = $('#pt' + id);
+    textarea.val('').removeAttr('disabled');
+    textarea.slideUp('fast');
+  }
+
+  function toggleCommentMarkupBox(id) {
+    $('#mb' + id).toggle();
+  }
+
+  /** Handle when the user clicks on a sort by link. */
+  function handleReSort(link) {
+    var classes = link.attr('class').split(/\s+/);
+    for (var i=0; i<classes.length; i++) {
+      if (classes[i] != 'sort-option') {
+	by = classes[i].substring(2);
+      }
+    }
+    setComparator();
+    // Save/update the sortBy cookie.
+    var expiration = new Date();
+    expiration.setDate(expiration.getDate() + 365);
+    document.cookie= 'sortBy=' + escape(by) +
+                     ';expires=' + expiration.toUTCString();
+    $('ul.comment-ul').each(function(index, ul) {
+      var comments = getChildren($(ul), true);
+      comments = sortComments(comments);
+      appendComments(comments, $(ul).empty());
+    });
+  }
+
+  /**
+   * Function to process a vote when a user clicks an arrow.
+   */
+  function handleVote(link) {
+    if (!opts.voting) {
+      showError("You'll need to login to vote.");
+      return;
+    }
+
+    var id = link.attr('id');
+    if (!id) {
+      // Didn't click on one of the voting arrows.
+      return;
+    }
+    // If it is an unvote, the new vote value is 0,
+    // Otherwise it's 1 for an upvote, or -1 for a downvote.
+    var value = 0;
+    if (id.charAt(1) != 'u') {
+      value = id.charAt(0) == 'u' ? 1 : -1;
+    }
+    // The data to be sent to the server.
+    var d = {
+      comment_id: id.substring(2),
+      value: value
+    };
+
+    // Swap the vote and unvote links.
+    link.hide();
+    $('#' + id.charAt(0) + (id.charAt(1) == 'u' ? 'v' : 'u') + d.comment_id)
+      .show();
+
+    // The div the comment is displayed in.
+    var div = $('div#cd' + d.comment_id);
+    var data = div.data('comment');
+
+    // If this is not an unvote, and the other vote arrow has
+    // already been pressed, unpress it.
+    if ((d.value !== 0) && (data.vote === d.value * -1)) {
+      $('#' + (d.value == 1 ? 'd' : 'u') + 'u' + d.comment_id).hide();
+      $('#' + (d.value == 1 ? 'd' : 'u') + 'v' + d.comment_id).show();
+    }
+
+    // Update the comments rating in the local data.
+    data.rating += (data.vote === 0) ? d.value : (d.value - data.vote);
+    data.vote = d.value;
+    div.data('comment', data);
+
+    // Change the rating text.
+    div.find('.rating:first')
+      .text(data.rating + ' point' + (data.rating == 1 ? '' : 's'));
+
+    // Send the vote information to the server.
+    $.ajax({
+      type: "POST",
+      url: opts.processVoteURL,
+      data: d,
+      error: function(request, textStatus, error) {
+        showError('Oops, there was a problem casting that vote.');
+      }
+    });
+  }
+
+  /**
+   * Open a reply form used to reply to an existing comment.
+   */
+  function openReply(id) {
+    // Swap out the reply link for the hide link
+    $('#rl' + id).hide();
+    $('#cr' + id).show();
+
+    // Add the reply li to the children ul.
+    var div = $(renderTemplate(replyTemplate, {id: id})).hide();
+    $('#cl' + id)
+      .prepend(div)
+      // Setup the submit handler for the reply form.
+      .find('#rf' + id)
+      .submit(function(event) {
+        event.preventDefault();
+        addComment($('#rf' + id));
+        closeReply(id);
+      })
+      .find('input[type=button]')
+      .click(function() {
+        closeReply(id);
+      });
+    div.slideDown('fast', function() {
+      $('#rf' + id).find('textarea').focus();
+    });
+  }
+
+  /**
+   * Close the reply form opened with openReply.
+   */
+  function closeReply(id) {
+    // Remove the reply div from the DOM.
+    $('#rd' + id).slideUp('fast', function() {
+      $(this).remove();
+    });
+
+    // Swap out the hide link for the reply link
+    $('#cr' + id).hide();
+    $('#rl' + id).show();
+  }
+
+  /**
+   * Recursively sort a tree of comments using the comp comparator.
+   */
+  function sortComments(comments) {
+    comments.sort(comp);
+    $.each(comments, function() {
+      this.children = sortComments(this.children);
+    });
+    return comments;
+  }
+
+  /**
+   * Get the children comments from a ul. If recursive is true,
+   * recursively include childrens' children.
+   */
+  function getChildren(ul, recursive) {
+    var children = [];
+    ul.children().children("[id^='cd']")
+      .each(function() {
+        var comment = $(this).data('comment');
+        if (recursive)
+          comment.children = getChildren($(this).find('#cl' + comment.id), true);
+        children.push(comment);
+      });
+    return children;
+  }
+
+  /** Create a div to display a comment in. */
+  function createCommentDiv(comment) {
+    if (!comment.displayed && !opts.moderator) {
+      return $('<div class="moderate">Thank you!  Your comment will show up '
+               + 'once it is has been approved by a moderator.</div>');
+    }
+    // Prettify the comment rating.
+    comment.pretty_rating = comment.rating + ' point' +
+      (comment.rating == 1 ? '' : 's');
+    // Make a class (for displaying not yet moderated comments differently)
+    comment.css_class = comment.displayed ? '' : ' moderate';
+    // Create a div for this comment.
+    var context = $.extend({}, opts, comment);
+    var div = $(renderTemplate(commentTemplate, context));
+
+    // If the user has voted on this comment, highlight the correct arrow.
+    if (comment.vote) {
+      var direction = (comment.vote == 1) ? 'u' : 'd';
+      div.find('#' + direction + 'v' + comment.id).hide();
+      div.find('#' + direction + 'u' + comment.id).show();
+    }
+
+    if (opts.moderator || comment.text != '[deleted]') {
+      div.find('a.reply').show();
+      if (comment.proposal_diff)
+        div.find('#sp' + comment.id).show();
+      if (opts.moderator && !comment.displayed)
+        div.find('#cm' + comment.id).show();
+      if (opts.moderator || (opts.username == comment.username))
+        div.find('#dc' + comment.id).show();
+    }
+    return div;
+  }
+
+  /**
+   * A simple template renderer. Placeholders such as <%id%> are replaced
+   * by context['id'] with items being escaped. Placeholders such as <#id#>
+   * are not escaped.
+   */
+  function renderTemplate(template, context) {
+    var esc = $(document.createElement('div'));
+
+    function handle(ph, escape) {
+      var cur = context;
+      $.each(ph.split('.'), function() {
+        cur = cur[this];
+      });
+      return escape ? esc.text(cur || "").html() : cur;
+    }
+
+    return template.replace(/<([%#])([\w\.]*)\1>/g, function() {
+      return handle(arguments[2], arguments[1] == '%' ? true : false);
+    });
+  }
+
+  /** Flash an error message briefly. */
+  function showError(message) {
+    $(document.createElement('div')).attr({'class': 'popup-error'})
+      .append($(document.createElement('div'))
+               .attr({'class': 'error-message'}).text(message))
+      .appendTo('body')
+      .fadeIn("slow")
+      .delay(2000)
+      .fadeOut("slow");
+  }
+
+  /** Add a link the user uses to open the comments popup. */
+  $.fn.comment = function() {
+    return this.each(function() {
+      var id = $(this).attr('id').substring(1);
+      var count = COMMENT_METADATA[id];
+      var title = count + ' comment' + (count == 1 ? '' : 's');
+      var image = count > 0 ? opts.commentBrightImage : opts.commentImage;
+      var addcls = count == 0 ? ' nocomment' : '';
+      $(this)
+        .append(
+          $(document.createElement('a')).attr({
+            href: '#',
+            'class': 'sphinx-comment-open' + addcls,
+            id: 'ao' + id
+          })
+            .append($(document.createElement('img')).attr({
+              src: image,
+              alt: 'comment',
+              title: title
+            }))
+            .click(function(event) {
+              event.preventDefault();
+              show($(this).attr('id').substring(2));
+            })
+        )
+        .append(
+          $(document.createElement('a')).attr({
+            href: '#',
+            'class': 'sphinx-comment-close hidden',
+            id: 'ah' + id
+          })
+            .append($(document.createElement('img')).attr({
+              src: opts.closeCommentImage,
+              alt: 'close',
+              title: 'close'
+            }))
+            .click(function(event) {
+              event.preventDefault();
+              hide($(this).attr('id').substring(2));
+            })
+        );
+    });
+  };
+
+  var opts = {
+    processVoteURL: '/_process_vote',
+    addCommentURL: '/_add_comment',
+    getCommentsURL: '/_get_comments',
+    acceptCommentURL: '/_accept_comment',
+    deleteCommentURL: '/_delete_comment',
+    commentImage: '/static/_static/comment.png',
+    closeCommentImage: '/static/_static/comment-close.png',
+    loadingImage: '/static/_static/ajax-loader.gif',
+    commentBrightImage: '/static/_static/comment-bright.png',
+    upArrow: '/static/_static/up.png',
+    downArrow: '/static/_static/down.png',
+    upArrowPressed: '/static/_static/up-pressed.png',
+    downArrowPressed: '/static/_static/down-pressed.png',
+    voting: false,
+    moderator: false
+  };
+
+  if (typeof COMMENT_OPTIONS != "undefined") {
+    opts = jQuery.extend(opts, COMMENT_OPTIONS);
+  }
+
+  var popupTemplate = '\
+    <div class="sphinx-comments" id="sc<%id%>">\
+      <p class="sort-options">\
+        Sort by:\
+        <a href="#" class="sort-option byrating">best rated</a>\
+        <a href="#" class="sort-option byascage">newest</a>\
+        <a href="#" class="sort-option byage">oldest</a>\
+      </p>\
+      <div class="comment-header">Comments</div>\
+      <div class="comment-loading" id="cn<%id%>">\
+        loading comments... <img src="<%loadingImage%>" alt="" /></div>\
+      <ul id="cl<%id%>" class="comment-ul"></ul>\
+      <div id="ca<%id%>">\
+      <p class="add-a-comment">Add a comment\
+        (<a href="#" class="comment-markup" id="ab<%id%>">markup</a>):</p>\
+      <div class="comment-markup-box" id="mb<%id%>">\
+        reStructured text markup: <i>*emph*</i>, <b>**strong**</b>, \
+        <tt>``code``</tt>, \
+        code blocks: <tt>::</tt> and an indented block after blank line</div>\
+      <form method="post" id="cf<%id%>" class="comment-form" action="">\
+        <textarea name="comment" cols="80"></textarea>\
+        <p class="propose-button">\
+          <a href="#" id="pc<%id%>" class="show-propose-change">\
+            Propose a change &#9657;\
+          </a>\
+          <a href="#" id="hc<%id%>" class="hide-propose-change">\
+            Propose a change &#9663;\
+          </a>\
+        </p>\
+        <textarea name="proposal" id="pt<%id%>" cols="80"\
+                  spellcheck="false"></textarea>\
+        <input type="submit" value="Add comment" />\
+        <input type="hidden" name="node" value="<%id%>" />\
+        <input type="hidden" name="parent" value="" />\
+      </form>\
+      </div>\
+    </div>';
+
+  var commentTemplate = '\
+    <div id="cd<%id%>" class="sphinx-comment<%css_class%>">\
+      <div class="vote">\
+        <div class="arrow">\
+          <a href="#" id="uv<%id%>" class="vote" title="vote up">\
+            <img src="<%upArrow%>" />\
+          </a>\
+          <a href="#" id="uu<%id%>" class="un vote" title="vote up">\
+            <img src="<%upArrowPressed%>" />\
+          </a>\
+        </div>\
+        <div class="arrow">\
+          <a href="#" id="dv<%id%>" class="vote" title="vote down">\
+            <img src="<%downArrow%>" id="da<%id%>" />\
+          </a>\
+          <a href="#" id="du<%id%>" class="un vote" title="vote down">\
+            <img src="<%downArrowPressed%>" />\
+          </a>\
+        </div>\
+      </div>\
+      <div class="comment-content">\
+        <p class="tagline comment">\
+          <span class="user-id"><%username%></span>\
+          <span class="rating"><%pretty_rating%></span>\
+          <span class="delta"><%time.delta%></span>\
+        </p>\
+        <div class="comment-text comment"><#text#></div>\
+        <p class="comment-opts comment">\
+          <a href="#" class="reply hidden" id="rl<%id%>">reply &#9657;</a>\
+          <a href="#" class="close-reply" id="cr<%id%>">reply &#9663;</a>\
+          <a href="#" id="sp<%id%>" class="show-proposal">proposal &#9657;</a>\
+          <a href="#" id="hp<%id%>" class="hide-proposal">proposal &#9663;</a>\
+          <a href="#" id="dc<%id%>" class="delete-comment hidden">delete</a>\
+          <span id="cm<%id%>" class="moderation hidden">\
+            <a href="#" id="ac<%id%>" class="accept-comment">accept</a>\
+          </span>\
+        </p>\
+        <pre class="proposal" id="pr<%id%>">\
+<#proposal_diff#>\
+        </pre>\
+          <ul class="comment-children" id="cl<%id%>"></ul>\
+        </div>\
+        <div class="clearleft"></div>\
+      </div>\
+    </div>';
+
+  var replyTemplate = '\
+    <li>\
+      <div class="reply-div" id="rd<%id%>">\
+        <form id="rf<%id%>">\
+          <textarea name="comment" cols="80"></textarea>\
+          <input type="submit" value="Add reply" />\
+          <input type="button" value="Cancel" />\
+          <input type="hidden" name="parent" value="<%id%>" />\
+          <input type="hidden" name="node" value="" />\
+        </form>\
+      </div>\
+    </li>';
+
+  $(document).ready(function() {
+    init();
+  });
+})(jQuery);
+
+$(document).ready(function() {
+  // add comment anchors for all paragraphs that are commentable
+  $('.sphinx-has-comment').comment();
+
+  // highlight search words in search results
+  $("div.context").each(function() {
+    var params = $.getQueryParameters();
+    var terms = (params.q) ? params.q[0].split(/\s+/) : [];
+    var result = $(this);
+    $.each(terms, function() {
+      result.highlightText(this.toLowerCase(), 'highlighted');
+    });
+  });
+
+  // directly open comment window if requested
+  var anchor = document.location.hash;
+  if (anchor.substring(0, 9) == '#comment-') {
+    $('#ao' + anchor.substring(9)).click();
+    document.location.hash = '#s' + anchor.substring(9);
+  }
+});

doc/html/acknowledgement.html

@@ -6,15 +6,15 @@
   <head>
     <meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
     
-    <title>Acknowledgements &mdash; musrfit 1.7.4 documentation</title>
+    <title>Acknowledgements &mdash; musrfit 1.7.6 documentation</title>
     
-    <link rel="stylesheet" href="_static/nature.css" type="text/css" />
+    <link rel="stylesheet" href="_static/haiku.css" type="text/css" />
     <link rel="stylesheet" href="_static/pygments.css" type="text/css" />
     
     <script type="text/javascript">
       var DOCUMENTATION_OPTIONS = {
         URL_ROOT:    './',
-        VERSION:     '1.7.4',
+        VERSION:     '1.7.6',
         COLLAPSE_INDEX: false,
         FILE_SUFFIX: '.html',
         HAS_SOURCE:  true
@@ -24,32 +24,29 @@
     <script type="text/javascript" src="_static/underscore.js"></script>
     <script type="text/javascript" src="_static/doctools.js"></script>
     <script type="text/javascript" src="http://cdn.mathjax.org/mathjax/latest/MathJax.js?config=TeX-AMS-MML_HTMLorMML"></script>
-    <link rel="top" title="musrfit 1.7.4 documentation" href="index.html" />
+    <link rel="top" title="musrfit 1.7.6 documentation" href="index.html" />
     <link rel="next" title="Bugtracking" href="bugtracking.html" />
     <link rel="prev" title="MusrRoot - an Extensible Open File Format for μSR" href="musr-root.html" /> 
   </head>
   <body>
-    <div class="related">
+      <div class="header"><h1 class="heading"><a href="index.html">
-      <h3>Navigation</h3>
+          <span>musrfit 1.7.6 documentation</span></a></h1>
-      <ul>
+        <h2 class="heading"><span>Acknowledgements</span></h2>
-        <li class="right" style="margin-right: 10px">
+      </div>
-          <a href="genindex.html" title="General Index"
+      <div class="topnav">
-             accesskey="I">index</a></li>
+      
-        <li class="right" >
+        <p>
-          <a href="bugtracking.html" title="Bugtracking"
+        «&#160;&#160;<a href="musr-root.html">MusrRoot - an Extensible Open File Format for μSR</a>
-             accesskey="N">next</a> |</li>
+        &#160;&#160;::&#160;&#160;
-        <li class="right" >
+        <a class="uplink" href="index.html">Contents</a>
-          <a href="musr-root.html" title="MusrRoot - an Extensible Open File Format for μSR"
+        &#160;&#160;::&#160;&#160;
-             accesskey="P">previous</a> |</li>
+        <a href="bugtracking.html">Bugtracking</a>&#160;&#160;»
-        <li><a href="index.html">musrfit 1.7.4 documentation</a> &raquo;</li> 
+        </p>
-      </ul>
-    </div>  
 
-    <div class="document">
+      </div>
-      <div class="documentwrapper">
+      <div class="content">
-        <div class="bodywrapper">
+        
-          <div class="body">
+        
-            
   <div class="section" id="acknowledgements">
 <span id="acknowledgment"></span><span id="index-0"></span><h1>Acknowledgements<a class="headerlink" href="#acknowledgements" title="Permalink to this headline">¶</a></h1>
 <dl class="docutils">
@@ -67,57 +64,22 @@ extremely competent way to deal with his projects as well as to deal with the ch
 </div>
 
 
-          </div>
-        </div>
       </div>
-      <div class="sphinxsidebar">
+      <div class="bottomnav">
-        <div class="sphinxsidebarwrapper">
+      
-  <h4>Previous topic</h4>
+        <p>
-  <p class="topless"><a href="musr-root.html"
+        «&#160;&#160;<a href="musr-root.html">MusrRoot - an Extensible Open File Format for μSR</a>
-                        title="previous chapter">MusrRoot - an Extensible Open File Format for μSR</a></p>
+        &#160;&#160;::&#160;&#160;
-  <h4>Next topic</h4>
+        <a class="uplink" href="index.html">Contents</a>
-  <p class="topless"><a href="bugtracking.html"
+        &#160;&#160;::&#160;&#160;
-                        title="next chapter">Bugtracking</a></p>
+        <a href="bugtracking.html">Bugtracking</a>&#160;&#160;»
-  <h3>This Page</h3>
+        </p>
-  <ul class="this-page-menu">
+
-    <li><a href="_sources/acknowledgement.txt"
-           rel="nofollow">Show Source</a></li>
-  </ul>
-<div id="searchbox" style="display: none">
-  <h3>Quick search</h3>
-    <form class="search" action="search.html" method="get">
-      <input type="text" name="q" />
-      <input type="submit" value="Go" />
-      <input type="hidden" name="check_keywords" value="yes" />
-      <input type="hidden" name="area" value="default" />
-    </form>
-    <p class="searchtip" style="font-size: 90%">
-    Enter search terms or a module, class or function name.
-    </p>
-</div>
-<script type="text/javascript">$('#searchbox').show(0);</script>
-        </div>
       </div>
-      <div class="clearer"></div>
+
-    </div>
-    <div class="related">
-      <h3>Navigation</h3>
-      <ul>
-        <li class="right" style="margin-right: 10px">
-          <a href="genindex.html" title="General Index"
-             >index</a></li>
-        <li class="right" >
-          <a href="bugtracking.html" title="Bugtracking"
-             >next</a> |</li>
-        <li class="right" >
-          <a href="musr-root.html" title="MusrRoot - an Extensible Open File Format for μSR"
-             >previous</a> |</li>
-        <li><a href="index.html">musrfit 1.7.4 documentation</a> &raquo;</li> 
-      </ul>
-    </div>
     <div class="footer">
         &copy; Copyright 2021, Andreas Suter.
-      Last updated on Aug 06, 2021.
+      Last updated on Oct 06, 2021.
       Created using <a href="http://sphinx-doc.org/">Sphinx</a> 1.2.3.
     </div>
   </body>

doc/html/any2many.html

@@ -6,15 +6,15 @@
   <head>
     <meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
     
-    <title>any2many - a Universal μSR-file-format converter &mdash; musrfit 1.7.4 documentation</title>
+    <title>any2many - a Universal μSR-file-format converter &mdash; musrfit 1.7.6 documentation</title>
     
-    <link rel="stylesheet" href="_static/nature.css" type="text/css" />
+    <link rel="stylesheet" href="_static/haiku.css" type="text/css" />
     <link rel="stylesheet" href="_static/pygments.css" type="text/css" />
     
     <script type="text/javascript">
       var DOCUMENTATION_OPTIONS = {
         URL_ROOT:    './',
-        VERSION:     '1.7.4',
+        VERSION:     '1.7.6',
         COLLAPSE_INDEX: false,
         FILE_SUFFIX: '.html',
         HAS_SOURCE:  true
@@ -24,32 +24,29 @@
     <script type="text/javascript" src="_static/underscore.js"></script>
     <script type="text/javascript" src="_static/doctools.js"></script>
     <script type="text/javascript" src="http://cdn.mathjax.org/mathjax/latest/MathJax.js?config=TeX-AMS-MML_HTMLorMML"></script>
-    <link rel="top" title="musrfit 1.7.4 documentation" href="index.html" />
+    <link rel="top" title="musrfit 1.7.6 documentation" href="index.html" />
     <link rel="next" title="MusrRoot - an Extensible Open File Format for μSR" href="musr-root.html" />
     <link rel="prev" title="msr2data - A Program for Automatically Processing Multiple musrfit msr Files" href="msr2data.html" /> 
   </head>
   <body>
-    <div class="related">
+      <div class="header"><h1 class="heading"><a href="index.html">
-      <h3>Navigation</h3>
+          <span>musrfit 1.7.6 documentation</span></a></h1>
-      <ul>
+        <h2 class="heading"><span>any2many - a Universal μSR-file-format converter</span></h2>
-        <li class="right" style="margin-right: 10px">
+      </div>
-          <a href="genindex.html" title="General Index"
+      <div class="topnav">
-             accesskey="I">index</a></li>
+      
-        <li class="right" >
+        <p>
-          <a href="musr-root.html" title="MusrRoot - an Extensible Open File Format for μSR"
+        «&#160;&#160;<a href="msr2data.html">msr2data - A Program for Automatically Processing Multiple <tt class="docutils literal"><span class="pre">musrfit</span></tt> msr Files</a>
-             accesskey="N">next</a> |</li>
+        &#160;&#160;::&#160;&#160;
-        <li class="right" >
+        <a class="uplink" href="index.html">Contents</a>
-          <a href="msr2data.html" title="msr2data - A Program for Automatically Processing Multiple musrfit msr Files"
+        &#160;&#160;::&#160;&#160;
-             accesskey="P">previous</a> |</li>
+        <a href="musr-root.html">MusrRoot - an Extensible Open File Format for μSR</a>&#160;&#160;»
-        <li><a href="index.html">musrfit 1.7.4 documentation</a> &raquo;</li> 
+        </p>
-      </ul>
-    </div>  
 
-    <div class="document">
+      </div>
-      <div class="documentwrapper">
+      <div class="content">
-        <div class="bodywrapper">
+        
-          <div class="body">
+        
-            
   <div class="section" id="any2many-a-universal-mgrsr-file-format-converter">
 <span id="index-0"></span><h1>any2many - a Universal μSR-file-format converter<a class="headerlink" href="#any2many-a-universal-mgrsr-file-format-converter" title="Permalink to this headline">¶</a></h1>
 <p><tt class="docutils literal"><span class="pre">any2many</span></tt> allows to convert most μSR-file-formats from one to the other.
@@ -57,57 +54,22 @@ For a detailed description see <a class="reference internal" href="user-manual.h
 </div>
 
 
-          </div>
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-      <div class="sphinxsidebar">
+      <div class="bottomnav">
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+      
-  <h4>Previous topic</h4>
+        <p>
-  <p class="topless"><a href="msr2data.html"
+        «&#160;&#160;<a href="msr2data.html">msr2data - A Program for Automatically Processing Multiple <tt class="docutils literal"><span class="pre">musrfit</span></tt> msr Files</a>
-                        title="previous chapter">msr2data - A Program for Automatically Processing Multiple <tt class="docutils literal"><span class="pre">musrfit</span></tt> msr Files</a></p>
+        &#160;&#160;::&#160;&#160;
-  <h4>Next topic</h4>
+        <a class="uplink" href="index.html">Contents</a>
-  <p class="topless"><a href="musr-root.html"
+        &#160;&#160;::&#160;&#160;
-                        title="next chapter">MusrRoot - an Extensible Open File Format for μSR</a></p>
+        <a href="musr-root.html">MusrRoot - an Extensible Open File Format for μSR</a>&#160;&#160;»
-  <h3>This Page</h3>
+        </p>
-  <ul class="this-page-menu">
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-           rel="nofollow">Show Source</a></li>
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-             >next</a> |</li>
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-             >previous</a> |</li>
-        <li><a href="index.html">musrfit 1.7.4 documentation</a> &raquo;</li> 
-      </ul>
-    </div>
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-      Last updated on Aug 06, 2021.
+      Last updated on Oct 06, 2021.
       Created using <a href="http://sphinx-doc.org/">Sphinx</a> 1.2.3.
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   </body>

doc/html/bugtracking.html

@@ -6,15 +6,15 @@
   <head>
     <meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
     
-    <title>Bugtracking &mdash; musrfit 1.7.4 documentation</title>
+    <title>Bugtracking &mdash; musrfit 1.7.6 documentation</title>
     
-    <link rel="stylesheet" href="_static/nature.css" type="text/css" />
+    <link rel="stylesheet" href="_static/haiku.css" type="text/css" />
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     <script type="text/javascript">
       var DOCUMENTATION_OPTIONS = {
         URL_ROOT:    './',
-        VERSION:     '1.7.4',
+        VERSION:     '1.7.6',
         COLLAPSE_INDEX: false,
         FILE_SUFFIX: '.html',
         HAS_SOURCE:  true
@@ -24,28 +24,26 @@
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     <script type="text/javascript" src="http://cdn.mathjax.org/mathjax/latest/MathJax.js?config=TeX-AMS-MML_HTMLorMML"></script>
-    <link rel="top" title="musrfit 1.7.4 documentation" href="index.html" />
+    <link rel="top" title="musrfit 1.7.6 documentation" href="index.html" />
     <link rel="prev" title="Acknowledgements" href="acknowledgement.html" /> 
   </head>
   <body>
-    <div class="related">
+      <div class="header"><h1 class="heading"><a href="index.html">
-      <h3>Navigation</h3>
+          <span>musrfit 1.7.6 documentation</span></a></h1>
-      <ul>
+        <h2 class="heading"><span>Bugtracking</span></h2>
-        <li class="right" style="margin-right: 10px">
+      </div>
-          <a href="genindex.html" title="General Index"
+      <div class="topnav">
-             accesskey="I">index</a></li>
+      
-        <li class="right" >
+        <p>
-          <a href="acknowledgement.html" title="Acknowledgements"
+        «&#160;&#160;<a href="acknowledgement.html">Acknowledgements</a>
-             accesskey="P">previous</a> |</li>
+        &#160;&#160;::&#160;&#160;
-        <li><a href="index.html">musrfit 1.7.4 documentation</a> &raquo;</li> 
+        <a class="uplink" href="index.html">Contents</a>
-      </ul>
+        </p>
-    </div>  
 
-    <div class="document">
+      </div>
-      <div class="documentwrapper">
+      <div class="content">
-        <div class="bodywrapper">
+        
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+        
-            
   <div class="section" id="bugtracking">
 <span id="index-0"></span><span id="id1"></span><h1>Bugtracking<a class="headerlink" href="#bugtracking" title="Permalink to this headline">¶</a></h1>
 <p>For reporting bugs or requesting new features and improvements please use
@@ -54,51 +52,20 @@ or send an e-mail to A. Suter at PSI.</p>
 </div>
 
 
-          </div>
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       </div>
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+      <div class="bottomnav">
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+      
-  <h4>Previous topic</h4>
+        <p>
-  <p class="topless"><a href="acknowledgement.html"
+        «&#160;&#160;<a href="acknowledgement.html">Acknowledgements</a>
-                        title="previous chapter">Acknowledgements</a></p>
+        &#160;&#160;::&#160;&#160;
-  <h3>This Page</h3>
+        <a class="uplink" href="index.html">Contents</a>
-  <ul class="this-page-menu">
+        </p>
-    <li><a href="_sources/bugtracking.txt"
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-      Last updated on Aug 06, 2021.
+      Last updated on Oct 06, 2021.
       Created using <a href="http://sphinx-doc.org/">Sphinx</a> 1.2.3.
     </div>
   </body>

doc/html/cite.html

@@ -6,15 +6,15 @@
   <head>
     <meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
     
-    <title>How to Cite musrfit? &mdash; musrfit 1.7.4 documentation</title>
+    <title>How to Cite musrfit? &mdash; musrfit 1.7.6 documentation</title>
     
-    <link rel="stylesheet" href="_static/nature.css" type="text/css" />
+    <link rel="stylesheet" href="_static/haiku.css" type="text/css" />
     <link rel="stylesheet" href="_static/pygments.css" type="text/css" />
     
     <script type="text/javascript">
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-        VERSION:     '1.7.4',
+        VERSION:     '1.7.6',
         COLLAPSE_INDEX: false,
         FILE_SUFFIX: '.html',
         HAS_SOURCE:  true
@@ -24,32 +24,29 @@
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     <script type="text/javascript" src="_static/doctools.js"></script>
     <script type="text/javascript" src="http://cdn.mathjax.org/mathjax/latest/MathJax.js?config=TeX-AMS-MML_HTMLorMML"></script>
-    <link rel="top" title="musrfit 1.7.4 documentation" href="index.html" />
+    <link rel="top" title="musrfit 1.7.6 documentation" href="index.html" />
     <link rel="next" title="Tutorial for musrfit" href="tutorial.html" />
     <link rel="prev" title="Welcome to the musrfit documentation!" href="index.html" /> 
   </head>
   <body>
-    <div class="related">
+      <div class="header"><h1 class="heading"><a href="index.html">
-      <h3>Navigation</h3>
+          <span>musrfit 1.7.6 documentation</span></a></h1>
-      <ul>
+        <h2 class="heading"><span>How to Cite musrfit?</span></h2>
-        <li class="right" style="margin-right: 10px">
+      </div>
-          <a href="genindex.html" title="General Index"
+      <div class="topnav">
-             accesskey="I">index</a></li>
+      
-        <li class="right" >
+        <p>
-          <a href="tutorial.html" title="Tutorial for musrfit"
+        «&#160;&#160;<a href="index.html">Welcome to the musrfit documentation!</a>
-             accesskey="N">next</a> |</li>
+        &#160;&#160;::&#160;&#160;
-        <li class="right" >
+        <a class="uplink" href="index.html">Contents</a>
-          <a href="index.html" title="Welcome to the musrfit documentation!"
+        &#160;&#160;::&#160;&#160;
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+        <a href="tutorial.html">Tutorial for <tt class="docutils literal"><span class="pre">musrfit</span></tt></a>&#160;&#160;»
-        <li><a href="index.html">musrfit 1.7.4 documentation</a> &raquo;</li> 
+        </p>
-      </ul>
-    </div>  
 
-    <div class="document">
+      </div>
-      <div class="documentwrapper">
+      <div class="content">
-        <div class="bodywrapper">
+        
-          <div class="body">
+        
-            
   <div class="section" id="how-to-cite-musrfit">
 <span id="cite"></span><span id="index-0"></span><h1>How to Cite <tt class="docutils literal"><span class="pre">musrfit</span></tt>?<a class="headerlink" href="#how-to-cite-musrfit" title="Permalink to this headline">¶</a></h1>
 <p>Since quite some effort is going into the development and maintenance of the <tt class="docutils literal"><span class="pre">musrfit</span></tt> package, you should at least acknowledge it in your publication if you have used it to analyze your data. Even better of course is to cite it properly by the reference given beneath</p>
@@ -69,57 +66,22 @@
 </div>
 
 
-          </div>
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-      <div class="sphinxsidebar">
+      <div class="bottomnav">
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-  <h4>Previous topic</h4>
+        <p>
-  <p class="topless"><a href="index.html"
+        «&#160;&#160;<a href="index.html">Welcome to the musrfit documentation!</a>
-                        title="previous chapter">Welcome to the musrfit documentation!</a></p>
+        &#160;&#160;::&#160;&#160;
-  <h4>Next topic</h4>
+        <a class="uplink" href="index.html">Contents</a>
-  <p class="topless"><a href="tutorial.html"
+        &#160;&#160;::&#160;&#160;
-                        title="next chapter">Tutorial for <tt class="docutils literal"><span class="pre">musrfit</span></tt></a></p>
+        <a href="tutorial.html">Tutorial for <tt class="docutils literal"><span class="pre">musrfit</span></tt></a>&#160;&#160;»
-  <h3>This Page</h3>
+        </p>
-  <ul class="this-page-menu">
+
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-           rel="nofollow">Show Source</a></li>
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         &copy; Copyright 2021, Andreas Suter.
-      Last updated on Aug 06, 2021.
+      Last updated on Oct 06, 2021.
       Created using <a href="http://sphinx-doc.org/">Sphinx</a> 1.2.3.
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   </body>

doc/html/genindex.html

@@ -7,15 +7,15 @@
   <head>
     <meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
     
-    <title>Index &mdash; musrfit 1.7.4 documentation</title>
+    <title>Index &mdash; musrfit 1.7.6 documentation</title>
     
-    <link rel="stylesheet" href="_static/nature.css" type="text/css" />
+    <link rel="stylesheet" href="_static/haiku.css" type="text/css" />
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     <script type="text/javascript">
       var DOCUMENTATION_OPTIONS = {
         URL_ROOT:    './',
-        VERSION:     '1.7.4',
+        VERSION:     '1.7.6',
         COLLAPSE_INDEX: false,
         FILE_SUFFIX: '.html',
         HAS_SOURCE:  true
@@ -25,24 +25,23 @@
     <script type="text/javascript" src="_static/underscore.js"></script>
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     <script type="text/javascript" src="http://cdn.mathjax.org/mathjax/latest/MathJax.js?config=TeX-AMS-MML_HTMLorMML"></script>
-    <link rel="top" title="musrfit 1.7.4 documentation" href="index.html" /> 
+    <link rel="top" title="musrfit 1.7.6 documentation" href="index.html" /> 
   </head>
   <body>
-    <div class="related">
+      <div class="header"><h1 class="heading"><a href="index.html">
-      <h3>Navigation</h3>
+          <span>musrfit 1.7.6 documentation</span></a></h1>
-      <ul>
+        <h2 class="heading"><span>Index</span></h2>
-        <li class="right" style="margin-right: 10px">
+      </div>
-          <a href="#" title="General Index"
+      <div class="topnav">
-             accesskey="I">index</a></li>
+      
-        <li><a href="index.html">musrfit 1.7.4 documentation</a> &raquo;</li> 
+        <p>
-      </ul>
+        <a class="uplink" href="index.html">Contents</a>
-    </div>  
+        </p>
 
-    <div class="document">
+      </div>
-      <div class="documentwrapper">
+      <div class="content">
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+        
-          <div class="body">
+        
-            
 
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@@ -963,43 +962,18 @@
 
 
 
-          </div>
-        </div>
       </div>
-      <div class="sphinxsidebar">
+      <div class="bottomnav">
-        <div class="sphinxsidebarwrapper">
+      
+        <p>
+        <a class="uplink" href="index.html">Contents</a>
+        </p>
 
-   
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-    Enter search terms or a module, class or function name.
-    </p>
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-<script type="text/javascript">$('#searchbox').show(0);</script>
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+
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-      <ul>
-        <li class="right" style="margin-right: 10px">
-          <a href="#" title="General Index"
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-      </ul>
-    </div>
     <div class="footer">
         &copy; Copyright 2021, Andreas Suter.
-      Last updated on Aug 10, 2021.
+      Last updated on Oct 06, 2021.
       Created using <a href="http://sphinx-doc.org/">Sphinx</a> 1.2.3.
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   </body>

doc/html/index.html

@@ -6,15 +6,15 @@
   <head>
     <meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
     
-    <title>Welcome to the musrfit documentation! &mdash; musrfit 1.7.4 documentation</title>
+    <title>Welcome to the musrfit documentation! &mdash; musrfit 1.7.6 documentation</title>
     
-    <link rel="stylesheet" href="_static/nature.css" type="text/css" />
+    <link rel="stylesheet" href="_static/haiku.css" type="text/css" />
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     <script type="text/javascript">
       var DOCUMENTATION_OPTIONS = {
         URL_ROOT:    './',
-        VERSION:     '1.7.4',
+        VERSION:     '1.7.6',
         COLLAPSE_INDEX: false,
         FILE_SUFFIX: '.html',
         HAS_SOURCE:  true
@@ -24,28 +24,26 @@
     <script type="text/javascript" src="_static/underscore.js"></script>
     <script type="text/javascript" src="_static/doctools.js"></script>
     <script type="text/javascript" src="http://cdn.mathjax.org/mathjax/latest/MathJax.js?config=TeX-AMS-MML_HTMLorMML"></script>
-    <link rel="top" title="musrfit 1.7.4 documentation" href="#" />
+    <link rel="top" title="musrfit 1.7.6 documentation" href="#" />
     <link rel="next" title="How to Cite musrfit?" href="cite.html" /> 
   </head>
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+      <div class="header"><h1 class="heading"><a href="#">
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+          <span>musrfit 1.7.6 documentation</span></a></h1>
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+        <h2 class="heading"><span>Welcome to the musrfit documentation!</span></h2>
-        <li class="right" style="margin-right: 10px">
+      </div>
-          <a href="genindex.html" title="General Index"
+      <div class="topnav">
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+      
-        <li class="right" >
+        <p>
-          <a href="cite.html" title="How to Cite musrfit?"
+        <a class="uplink" href="#">Contents</a>
-             accesskey="N">next</a> |</li>
+        &#160;&#160;::&#160;&#160;
-        <li><a href="#">musrfit 1.7.4 documentation</a> &raquo;</li> 
+        <a href="cite.html">How to Cite <tt class="docutils literal"><span class="pre">musrfit</span></tt>?</a>&#160;&#160;»
-      </ul>
+        </p>
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+      </div>
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   <div class="section" id="welcome-to-the-musrfit-documentation">
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 <div class="toctree-wrapper compound">
@@ -135,57 +133,20 @@
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-      <div class="sphinxsidebar">
+      <div class="bottomnav">
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+        <p>
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+        <a class="uplink" href="#">Contents</a>
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@@ -6,15 +6,15 @@
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-    <title>msr2data - A Program for Automatically Processing Multiple musrfit msr Files &mdash; musrfit 1.7.4 documentation</title>
+    <title>msr2data - A Program for Automatically Processing Multiple musrfit msr Files &mdash; musrfit 1.7.6 documentation</title>
     
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   <div class="section" id="msr2data-a-program-for-automatically-processing-multiple-musrfit-msr-files">
 <span id="msr2data"></span><span id="index-0"></span><h1>msr2data - A Program for Automatically Processing Multiple <tt class="docutils literal"><span class="pre">musrfit</span></tt> msr Files<a class="headerlink" href="#msr2data-a-program-for-automatically-processing-multiple-musrfit-msr-files" title="Permalink to this headline">¶</a></h1>
 <p><tt class="docutils literal"><span class="pre">msr2data</span></tt> (originally written by B. M. Wojek) is a program implemented in <tt class="docutils literal"><span class="pre">C++</span></tt>. Its purpose is
@@ -369,77 +366,22 @@ fit serves as template for the second and so on. The template field stays empty
 </div>
 
 
-          </div>
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+      <div class="bottomnav">
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-  <h3><a href="index.html">Table Of Contents</a></h3>
+        <p>
-  <ul>
+        «&#160;&#160;<a href="mupp.html">mupp - μSR Parameter Plotter</a>
-<li><a class="reference internal" href="#">msr2data - A Program for Automatically Processing Multiple <tt class="docutils literal"><span class="pre">musrfit</span></tt> msr Files</a><ul>
+        &#160;&#160;::&#160;&#160;
-<li><a class="reference internal" href="#basic-types-of-usage">Basic Types of Usage</a><ul>
+        <a class="uplink" href="index.html">Contents</a>
-<li><a class="reference internal" href="#run-list-file-structure">Run List File Structure</a></li>
+        &#160;&#160;::&#160;&#160;
-</ul>
+        <a href="any2many.html">any2many - a Universal μSR-file-format converter</a>&#160;&#160;»
-</li>
+        </p>
-<li><a class="reference internal" href="#optional-parameters">Optional Parameters</a></li>
-<li><a class="reference internal" href="#the-global-mode">The Global Mode</a><ul>
-<li><a class="reference internal" href="#file-generation">File Generation</a></li>
-<li><a class="reference internal" href="#parameter-extraction">Parameter Extraction</a></li>
-<li><a class="reference internal" href="#the-extended-global-mode">The Extended Global Mode</a></li>
-</ul>
-</li>
-<li><a class="reference internal" href="#known-limitations">Known Limitations</a></li>
-<li><a class="reference internal" href="#the-graphical-user-interface-for-msr2data-provided-by-musredit">The Graphical User Interface for msr2data Provided by musredit</a></li>
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@@ -6,15 +6,15 @@
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-    <title>mupp - μSR Parameter Plotter &mdash; musrfit 1.7.4 documentation</title>
+    <title>mupp - μSR Parameter Plotter &mdash; musrfit 1.7.6 documentation</title>
     
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@@ -24,32 +24,29 @@
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+        <h2 class="heading"><span>mupp - μSR Parameter Plotter</span></h2>
-        <li class="right" style="margin-right: 10px">
+      </div>
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+      <div class="topnav">
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+        &#160;&#160;::&#160;&#160;
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   <div class="section" id="mupp-mgrsr-parameter-plotter">
 <span id="mupp"></span><span id="index-0"></span><h1>mupp - μSR Parameter Plotter<a class="headerlink" href="#mupp-mgrsr-parameter-plotter" title="Permalink to this headline">¶</a></h1>
 <p><tt class="docutils literal"><span class="pre">mupp</span></tt> is a little helper program which allows to quickly plot a collection of msr-file parameters,
@@ -266,70 +263,22 @@ SCRIPT COMMANDS:
 </div>
 
 
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+      <div class="bottomnav">
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+        «&#160;&#160;<a href="musredit.html"><tt class="docutils literal"><span class="pre">musredit</span></tt>: the GUI Based Interface to <tt class="docutils literal"><span class="pre">musrfit</span></tt></a>
-<li><a class="reference internal" href="#">mupp - μSR Parameter Plotter</a><ul>
+        &#160;&#160;::&#160;&#160;
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+        <a class="uplink" href="index.html">Contents</a>
-<li><a class="reference internal" href="#define-variable-dialog">Define Variable Dialog</a></li>
+        &#160;&#160;::&#160;&#160;
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+        <a href="msr2data.html">msr2data - A Program for Automatically Processing Multiple <tt class="docutils literal"><span class="pre">musrfit</span></tt> msr Files</a>&#160;&#160;»
-</li>
+        </p>
-<li><a class="reference internal" href="#the-scripting-interface">The Scripting Interface</a></li>
-<li><a class="reference internal" href="#the-usage-summary">The Usage Summary</a></li>
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doc/html/musr-root.html

@@ -6,15 +6,15 @@
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-    <title>MusrRoot - an Extensible Open File Format for μSR &mdash; musrfit 1.7.4 documentation</title>
+    <title>MusrRoot - an Extensible Open File Format for μSR &mdash; musrfit 1.7.6 documentation</title>
     
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         HAS_SOURCE:  true
@@ -24,32 +24,29 @@
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+    <link rel="top" title="musrfit 1.7.6 documentation" href="index.html" />
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+        <h2 class="heading"><span>MusrRoot - an Extensible Open File Format for μSR</span></h2>
-        <li class="right" style="margin-right: 10px">
+      </div>
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+      <div class="topnav">
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+        «&#160;&#160;<a href="any2many.html">any2many - a Universal μSR-file-format converter</a>
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+        <a class="uplink" href="index.html">Contents</a>
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+        <a href="acknowledgement.html">Acknowledgements</a>&#160;&#160;»
-        <li><a href="index.html">musrfit 1.7.4 documentation</a> &raquo;</li> 
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   <div class="section" id="musrroot-an-extensible-open-file-format-for-mgrsr">
 <span id="musrroot"></span><span id="index-0"></span><h1>MusrRoot - an Extensible Open File Format for μSR<a class="headerlink" href="#musrroot-an-extensible-open-file-format-for-mgrsr" title="Permalink to this headline">¶</a></h1>
 <p>Until 2011 different μSR file formats were used within PSI. The bulk-μSR instruments were
@@ -847,88 +844,22 @@ the entry has been added. The last token, <tt class="docutils literal"><span cla
 </div>
 
 
-          </div>
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+      <div class="bottomnav">
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+        <p>
-  <ul>
+        «&#160;&#160;<a href="any2many.html">any2many - a Universal μSR-file-format converter</a>
-<li><a class="reference internal" href="#">MusrRoot - an Extensible Open File Format for μSR</a><ul>
+        &#160;&#160;::&#160;&#160;
-<li><a class="reference internal" href="#some-basics-concerning-root-files">Some Basics Concerning ROOT Files</a></li>
+        <a class="uplink" href="index.html">Contents</a>
-<li><a class="reference internal" href="#id1">MusrRoot an Extensible Open File Format for μSR</a><ul>
+        &#160;&#160;::&#160;&#160;
-<li><a class="reference internal" href="#run-information-contained-in-runheader">Run Information Contained in <tt class="docutils literal"><span class="pre">RunHeader</span></tt></a><ul>
+        <a href="acknowledgement.html">Acknowledgements</a>&#160;&#160;»
-<li><a class="reference internal" href="#runinfo-overview"><tt class="docutils literal"><span class="pre">RunInfo</span></tt> Overview</a></li>
+        </p>
-</ul>
-</li>
-</ul>
-</li>
-<li><a class="reference internal" href="#tmusrrunheader-concept">TMusrRunHeader Concept</a><ul>
-<li><a class="reference internal" href="#user-interface-for-musrroot-run-header">User Interface for MusrRoot Run Header</a><ul>
-<li><a class="reference internal" href="#writing-a-musrroot-run-header">Writing a MusrRoot Run Header</a></li>
-<li><a class="reference internal" href="#reading-a-musrroot-run-header">Reading a MusrRoot Run Header</a></li>
-</ul>
-</li>
-<li><a class="reference internal" href="#validation-of-a-musrroot-file">Validation of a MusrRoot File</a></li>
-</ul>
-</li>
-<li><a class="reference internal" href="#runinfo-required">RunInfo (Required)</a></li>
-<li><a class="reference internal" href="#detectorinfo-required">DetectorInfo (Required)</a></li>
-<li><a class="reference internal" href="#sampleenvironmentinfo-required">SampleEnvironmentInfo (Required)</a></li>
-<li><a class="reference internal" href="#magneticfieldenvironmentinfo-required">MagneticFieldEnvironmentInfo (Required)</a></li>
-<li><a class="reference internal" href="#beamlineinfo-required">BeamlineInfo (Required)</a></li>
-<li><a class="reference internal" href="#exhaustive-musrroot-tree-including-everything-required">Exhaustive MusrRoot Tree Including Everything Required</a></li>
-<li><a class="reference internal" href="#tmusrrunphysicalquantity-possible-representations">TMusrRunPhysicalQuantity - Possible Representations</a></li>
-</ul>
-</li>
-</ul>
 
-  <h4>Previous topic</h4>
-  <p class="topless"><a href="any2many.html"
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-                        title="next chapter">Acknowledgements</a></p>
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+      Last updated on Oct 06, 2021.
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doc/html/musredit.html

@@ -6,15 +6,15 @@
   <head>
     <meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
     
-    <title>musredit: the GUI Based Interface to musrfit &mdash; musrfit 1.7.4 documentation</title>
+    <title>musredit: the GUI Based Interface to musrfit &mdash; musrfit 1.7.6 documentation</title>
     
-    <link rel="stylesheet" href="_static/nature.css" type="text/css" />
+    <link rel="stylesheet" href="_static/haiku.css" type="text/css" />
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       var DOCUMENTATION_OPTIONS = {
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-        VERSION:     '1.7.4',
+        VERSION:     '1.7.6',
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         FILE_SUFFIX: '.html',
         HAS_SOURCE:  true
@@ -24,32 +24,29 @@
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-    <link rel="top" title="musrfit 1.7.4 documentation" href="index.html" />
+    <link rel="top" title="musrfit 1.7.6 documentation" href="index.html" />
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+      <div class="header"><h1 class="heading"><a href="index.html">
-      <h3>Navigation</h3>
+          <span>musrfit 1.7.6 documentation</span></a></h1>
-      <ul>
+        <h2 class="heading"><span>musredit: the GUI Based Interface to musrfit</span></h2>
-        <li class="right" style="margin-right: 10px">
+      </div>
-          <a href="genindex.html" title="General Index"
+      <div class="topnav">
-             accesskey="I">index</a></li>
+      
-        <li class="right" >
+        <p>
-          <a href="mupp.html" title="mupp - μSR Parameter Plotter"
+        «&#160;&#160;<a href="setup-dks.html">Setting up <tt class="docutils literal"><span class="pre">musrfit</span></tt> / <tt class="docutils literal"><span class="pre">DKS</span></tt>: High Speed Fitting with GPU&#8217;s</a>
-             accesskey="N">next</a> |</li>
+        &#160;&#160;::&#160;&#160;
-        <li class="right" >
+        <a class="uplink" href="index.html">Contents</a>
-          <a href="setup-dks.html" title="Setting up musrfit / DKS: High Speed Fitting with GPU’s"
+        &#160;&#160;::&#160;&#160;
-             accesskey="P">previous</a> |</li>
+        <a href="mupp.html">mupp - μSR Parameter Plotter</a>&#160;&#160;»
-        <li><a href="index.html">musrfit 1.7.4 documentation</a> &raquo;</li> 
+        </p>
-      </ul>
-    </div>  
 
-    <div class="document">
+      </div>
-      <div class="documentwrapper">
+      <div class="content">
-        <div class="bodywrapper">
+        
-          <div class="body">
+        
-            
   <div class="section" id="musredit-the-gui-based-interface-to-musrfit">
 <span id="musredit-sec"></span><span id="index-0"></span><h1><tt class="docutils literal"><span class="pre">musredit</span></tt>: the GUI Based Interface to <tt class="docutils literal"><span class="pre">musrfit</span></tt><a class="headerlink" href="#musredit-the-gui-based-interface-to-musrfit" title="Permalink to this headline">¶</a></h1>
 <div class="section" id="introduction">
@@ -480,82 +477,22 @@ the corresponding fit parameter value, except the phases where the step will be
 </div>
 
 
-          </div>
-        </div>
       </div>
-      <div class="sphinxsidebar">
+      <div class="bottomnav">
-        <div class="sphinxsidebarwrapper">
+      
-  <h3><a href="index.html">Table Of Contents</a></h3>
+        <p>
-  <ul>
+        «&#160;&#160;<a href="setup-dks.html">Setting up <tt class="docutils literal"><span class="pre">musrfit</span></tt> / <tt class="docutils literal"><span class="pre">DKS</span></tt>: High Speed Fitting with GPU&#8217;s</a>
-<li><a class="reference internal" href="#"><tt class="docutils literal"><span class="pre">musredit</span></tt>: the GUI Based Interface to <tt class="docutils literal"><span class="pre">musrfit</span></tt></a><ul>
+        &#160;&#160;::&#160;&#160;
-<li><a class="reference internal" href="#introduction">Introduction</a></li>
+        <a class="uplink" href="index.html">Contents</a>
-<li><a class="reference internal" href="#available-executable-configuration-files-and-their-basic-usage">Available Executable, Configuration Files and their Basic Usage</a><ul>
+        &#160;&#160;::&#160;&#160;
-<li><a class="reference internal" href="#musredit-musrgui">musredit (musrgui)</a></li>
+        <a href="mupp.html">mupp - μSR Parameter Plotter</a>&#160;&#160;»
-<li><a class="reference internal" href="#musredit-startup-xml">musredit_startup.xml</a></li>
+        </p>
-</ul>
-</li>
-<li><a class="reference internal" href="#musredit-features">musredit Features</a></li>
-<li><a class="reference internal" href="#id1">musrWiz</a><ul>
-<li><a class="reference internal" href="#musrwiz-introduction">musrWiz-Introduction</a></li>
-<li><a class="reference internal" href="#musrwiz-theory">musrWiz - Theory</a></li>
-<li><a class="reference internal" href="#musrwiz-functions">musrWiz - Functions</a></li>
-<li><a class="reference internal" href="#musrwiz-maps">musrWiz - Maps</a></li>
-<li><a class="reference internal" href="#musrwiz-fit-parameters">musrWiz - Fit Parameters</a></li>
-<li><a class="reference internal" href="#musrwiz-fit-info">musrWiz - Fit Info</a></li>
-<li><a class="reference internal" href="#musrwiz-create">musrWiz - Create</a></li>
-</ul>
-</li>
-<li><a class="reference internal" href="#musrstep">musrStep</a></li>
-</ul>
-</li>
-</ul>
 
-  <h4>Previous topic</h4>
-  <p class="topless"><a href="setup-dks.html"
-                        title="previous chapter">Setting up <tt class="docutils literal"><span class="pre">musrfit</span></tt> / <tt class="docutils literal"><span class="pre">DKS</span></tt>: High Speed Fitting with GPU&#8217;s</a></p>
-  <h4>Next topic</h4>
-  <p class="topless"><a href="mupp.html"
-                        title="next chapter">mupp - μSR Parameter Plotter</a></p>
-  <h3>This Page</h3>
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-             >next</a> |</li>
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-      Last updated on Aug 06, 2021.
+      Last updated on Oct 06, 2021.
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doc/html/search.html

@@ -6,15 +6,15 @@
   <head>
     <meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
     
-    <title>Search &mdash; musrfit 1.7.4 documentation</title>
+    <title>Search &mdash; musrfit 1.7.6 documentation</title>
     
-    <link rel="stylesheet" href="_static/nature.css" type="text/css" />
+    <link rel="stylesheet" href="_static/haiku.css" type="text/css" />
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-        VERSION:     '1.7.4',
+        VERSION:     '1.7.6',
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         HAS_SOURCE:  true
@@ -25,7 +25,7 @@
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     <script type="text/javascript" src="_static/searchtools.js"></script>
-    <link rel="top" title="musrfit 1.7.4 documentation" href="index.html" />
+    <link rel="top" title="musrfit 1.7.6 documentation" href="index.html" />
   <script type="text/javascript">
     jQuery(function() { Search.loadIndex("searchindex.js"); });
   </script>
@@ -35,21 +35,20 @@
 
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   <body>
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+      <div class="header"><h1 class="heading"><a href="index.html">
-      <h3>Navigation</h3>
+          <span>musrfit 1.7.6 documentation</span></a></h1>
-      <ul>
+        <h2 class="heading"><span>Search</span></h2>
-        <li class="right" style="margin-right: 10px">
+      </div>
-          <a href="genindex.html" title="General Index"
+      <div class="topnav">
-             accesskey="I">index</a></li>
+      
-        <li><a href="index.html">musrfit 1.7.4 documentation</a> &raquo;</li> 
+        <p>
-      </ul>
+        <a class="uplink" href="index.html">Contents</a>
-    </div>  
+        </p>
 
-    <div class="document">
+      </div>
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+        
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   <div id="fallback" class="admonition warning">
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@@ -74,27 +73,18 @@
   
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-      <div class="sphinxsidebar">
+      <div class="bottomnav">
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+        <p>
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+
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-      <ul>
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-          <a href="genindex.html" title="General Index"
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-      </ul>
-    </div>
     <div class="footer">
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-      Last updated on Aug 10, 2021.
+      Last updated on Oct 06, 2021.
       Created using <a href="http://sphinx-doc.org/">Sphinx</a> 1.2.3.
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   </body>

doc/html/setup-dks.html

@@ -6,15 +6,15 @@
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     <meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
     
-    <title>Setting up musrfit / DKS: High Speed Fitting with GPU’s &mdash; musrfit 1.7.4 documentation</title>
+    <title>Setting up musrfit / DKS: High Speed Fitting with GPU’s &mdash; musrfit 1.7.6 documentation</title>
     
-    <link rel="stylesheet" href="_static/nature.css" type="text/css" />
+    <link rel="stylesheet" href="_static/haiku.css" type="text/css" />
     <link rel="stylesheet" href="_static/pygments.css" type="text/css" />
     
     <script type="text/javascript">
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-        VERSION:     '1.7.4',
+        VERSION:     '1.7.6',
         COLLAPSE_INDEX: false,
         FILE_SUFFIX: '.html',
         HAS_SOURCE:  true
@@ -24,32 +24,29 @@
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-    <link rel="top" title="musrfit 1.7.4 documentation" href="index.html" />
+    <link rel="top" title="musrfit 1.7.6 documentation" href="index.html" />
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+      <div class="header"><h1 class="heading"><a href="index.html">
-      <h3>Navigation</h3>
+          <span>musrfit 1.7.6 documentation</span></a></h1>
-      <ul>
+        <h2 class="heading"><span>Setting up musrfit / DKS: High Speed Fitting with GPU’s</span></h2>
-        <li class="right" style="margin-right: 10px">
+      </div>
-          <a href="genindex.html" title="General Index"
+      <div class="topnav">
-             accesskey="I">index</a></li>
+      
-        <li class="right" >
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+        «&#160;&#160;<a href="setup-standard.html">Setting up <tt class="docutils literal"><span class="pre">musrfit</span></tt> on Different Platforms</a>
-             accesskey="N">next</a> |</li>
+        &#160;&#160;::&#160;&#160;
-        <li class="right" >
+        <a class="uplink" href="index.html">Contents</a>
-          <a href="setup-standard.html" title="Setting up musrfit on Different Platforms"
+        &#160;&#160;::&#160;&#160;
-             accesskey="P">previous</a> |</li>
+        <a href="musredit.html"><tt class="docutils literal"><span class="pre">musredit</span></tt>: the GUI Based Interface to <tt class="docutils literal"><span class="pre">musrfit</span></tt></a>&#160;&#160;»
-        <li><a href="index.html">musrfit 1.7.4 documentation</a> &raquo;</li> 
+        </p>
-      </ul>
-    </div>  
 
-    <div class="document">
+      </div>
-      <div class="documentwrapper">
+      <div class="content">
-        <div class="bodywrapper">
+        
-          <div class="body">
+        
-            
   <div class="section" id="setting-up-musrfit-dks-high-speed-fitting-with-gpu-s">
 <span id="setup-dks"></span><span id="index-0"></span><h1>Setting up <tt class="docutils literal"><span class="pre">musrfit</span></tt> / <tt class="docutils literal"><span class="pre">DKS</span></tt>: High Speed Fitting with GPU&#8217;s<a class="headerlink" href="#setting-up-musrfit-dks-high-speed-fitting-with-gpu-s" title="Permalink to this headline">¶</a></h1>
 <p>In the years 2016/2017 we explored ways to speed up current fitting frameworks, especially <tt class="docutils literal"><span class="pre">musrfit.</span></tt>
@@ -255,78 +252,22 @@ The only thing you need <tt class="docutils literal"><span class="pre">DKS</span
 </div>
 
 
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+      <div class="bottomnav">
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+      
-  <h3><a href="index.html">Table Of Contents</a></h3>
+        <p>
-  <ul>
+        «&#160;&#160;<a href="setup-standard.html">Setting up <tt class="docutils literal"><span class="pre">musrfit</span></tt> on Different Platforms</a>
-<li><a class="reference internal" href="#">Setting up <tt class="docutils literal"><span class="pre">musrfit</span></tt> / <tt class="docutils literal"><span class="pre">DKS</span></tt>: High Speed Fitting with GPU&#8217;s</a><ul>
+        &#160;&#160;::&#160;&#160;
-<li><a class="reference internal" href="#setting-up-musrfit-dks-for-a-tesla-k40c-nvidia">Setting up <tt class="docutils literal"><span class="pre">musrfit/DKS</span></tt> for a Tesla K40c (NVIDIA)</a><ul>
+        <a class="uplink" href="index.html">Contents</a>
-<li><a class="reference internal" href="#driver-installation-for-the-tesla-k40c">Driver Installation for the Tesla K40c</a></li>
+        &#160;&#160;::&#160;&#160;
-<li><a class="reference internal" href="#installation-of-cuda">Installation of CUDA</a></li>
+        <a href="musredit.html"><tt class="docutils literal"><span class="pre">musredit</span></tt>: the GUI Based Interface to <tt class="docutils literal"><span class="pre">musrfit</span></tt></a>&#160;&#160;»
-<li><a class="reference internal" href="#installation-of-dks">Installation of DKS</a></li>
+        </p>
-<li><a class="reference internal" href="#installation-of-musrfit-for-dks">Installation of musrfit for DKS</a></li>
-</ul>
-</li>
-<li><a class="reference internal" href="#setting-up-musrfit-dks-for-a-amd-graphic-card-radeon-r9-390x">Setting up <tt class="docutils literal"><span class="pre">musrfit/DKS</span></tt> for a AMD Graphic Card (Radeon R9 390X)</a><ul>
-<li><a class="reference internal" href="#driver-installation-for-an-amd-graphic-card-e-g-radeon-r9-390x">Driver Installation for an AMD Graphic Card, <em>e.g.</em> Radeon R9 390X</a></li>
-<li><a class="reference internal" href="#amd-app-software-development-kit-sdk-to-enable-opencl-support">AMD APP Software Development Kit (SDK) to enable <tt class="docutils literal"><span class="pre">OpenCL</span></tt> support</a></li>
-<li><a class="reference internal" href="#installation-of-dks-and-musrfit">Installation of DKS and musrfit</a></li>
-</ul>
-</li>
-<li><a class="reference internal" href="#setting-up-musrfit-dks-for-macos-for-opencl-support">Setting up <tt class="docutils literal"><span class="pre">musrfit/DKS</span></tt> for macOS for OpenCL support</a></li>
-</ul>
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-  <h4>Previous topic</h4>
-  <p class="topless"><a href="setup-standard.html"
-                        title="previous chapter">Setting up <tt class="docutils literal"><span class="pre">musrfit</span></tt> on Different Platforms</a></p>
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-                        title="next chapter"><tt class="docutils literal"><span class="pre">musredit</span></tt>: the GUI Based Interface to <tt class="docutils literal"><span class="pre">musrfit</span></tt></a></p>
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@@ -6,15 +6,15 @@
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-    <title>Setting up musrfit on Different Platforms &mdash; musrfit 1.7.4 documentation</title>
+    <title>Setting up musrfit on Different Platforms &mdash; musrfit 1.7.6 documentation</title>
     
-    <link rel="stylesheet" href="_static/nature.css" type="text/css" />
+    <link rel="stylesheet" href="_static/haiku.css" type="text/css" />
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+        VERSION:     '1.7.6',
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         HAS_SOURCE:  true
@@ -24,32 +24,29 @@
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+    <link rel="top" title="musrfit 1.7.6 documentation" href="index.html" />
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+      <div class="header"><h1 class="heading"><a href="index.html">
-      <h3>Navigation</h3>
+          <span>musrfit 1.7.6 documentation</span></a></h1>
-      <ul>
+        <h2 class="heading"><span>Setting up musrfit on Different Platforms</span></h2>
-        <li class="right" style="margin-right: 10px">
+      </div>
-          <a href="genindex.html" title="General Index"
+      <div class="topnav">
-             accesskey="I">index</a></li>
+      
-        <li class="right" >
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+        &#160;&#160;::&#160;&#160;
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+        <a class="uplink" href="index.html">Contents</a>
-          <a href="user-libs.html" title="Documentation of user libs (user functions)"
+        &#160;&#160;::&#160;&#160;
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+        <a href="setup-dks.html">Setting up <tt class="docutils literal"><span class="pre">musrfit</span></tt> / <tt class="docutils literal"><span class="pre">DKS</span></tt>: High Speed Fitting with GPU&#8217;s</a>&#160;&#160;»
-        <li><a href="index.html">musrfit 1.7.4 documentation</a> &raquo;</li> 
+        </p>
-      </ul>
-    </div>  
 
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+      </div>
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+      <div class="content">
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   <div class="section" id="setting-up-musrfit-on-different-platforms">
 <span id="musrfit-setup"></span><span id="index-0"></span><h1>Setting up <tt class="docutils literal"><span class="pre">musrfit</span></tt> on Different Platforms<a class="headerlink" href="#setting-up-musrfit-on-different-platforms" title="Permalink to this headline">¶</a></h1>
 <div class="section" id="supported-operating-systems-and-software-requirements">
@@ -1192,123 +1189,22 @@ $ musrview test-histo-ROOT-NPP.msr
 </div>
 
 
-          </div>
-        </div>
       </div>
-      <div class="sphinxsidebar">
+      <div class="bottomnav">
-        <div class="sphinxsidebarwrapper">
+      
-  <h3><a href="index.html">Table Of Contents</a></h3>
+        <p>
-  <ul>
+        «&#160;&#160;<a href="user-libs.html">Documentation of user libs (user functions)</a>
-<li><a class="reference internal" href="#">Setting up <tt class="docutils literal"><span class="pre">musrfit</span></tt> on Different Platforms</a><ul>
+        &#160;&#160;::&#160;&#160;
-<li><a class="reference internal" href="#supported-operating-systems-and-software-requirements">Supported Operating Systems and Software Requirements</a></li>
+        <a class="uplink" href="index.html">Contents</a>
-<li><a class="reference internal" href="#os-restrictions">OS Restrictions</a></li>
+        &#160;&#160;::&#160;&#160;
-<li><a class="reference internal" href="#gnu-linux">GNU/Linux</a><ul>
+        <a href="setup-dks.html">Setting up <tt class="docutils literal"><span class="pre">musrfit</span></tt> / <tt class="docutils literal"><span class="pre">DKS</span></tt>: High Speed Fitting with GPU&#8217;s</a>&#160;&#160;»
-<li><a class="reference internal" href="#requirements">Requirements</a><ul>
+        </p>
-<li><a class="reference internal" href="#everything-but-root-and-nexus">Everything but ROOT and NeXus</a></li>
-<li><a class="reference internal" href="#installation-of-nexus-requirements-optional">Installation of NeXus requirements (optional)</a></li>
-<li><a class="reference internal" href="#index-16">ROOT</a></li>
-</ul>
-</li>
-<li><a class="reference internal" href="#musrfit">musrfit</a><ul>
-<li><a class="reference internal" href="#musrfit-build-with-cmake">musrfit build with cmake</a></li>
-<li><a class="reference internal" href="#musrfit-last-step-of-the-installation">musrfit last step of the installation</a></li>
-</ul>
-</li>
-<li><a class="reference internal" href="#musredit">musredit</a></li>
-<li><a class="reference internal" href="#musrgui-deprecated">musrgui (deprecated)</a></li>
-<li><a class="reference internal" href="#check-the-installation">Check the installation</a></li>
-</ul>
-</li>
-<li><a class="reference internal" href="#ms-windows">MS Windows</a><ul>
-<li><a class="reference internal" href="#id5">Requirements</a><ul>
-<li><a class="reference internal" href="#setting-up-cygwin">Setting up Cygwin</a></li>
-<li><a class="reference internal" href="#id6">Everything but ROOT and NeXus</a></li>
-<li><a class="reference internal" href="#index-22">Installation of NeXus requirements (optional)</a></li>
-<li><a class="reference internal" href="#index-23">ROOT</a></li>
-</ul>
-</li>
-<li><a class="reference internal" href="#index-24">musrfit</a><ul>
-<li><a class="reference internal" href="#index-25">musrfit build with cmake</a></li>
-</ul>
-</li>
-<li><a class="reference internal" href="#index-26">musredit</a></li>
-<li><a class="reference internal" href="#musrgui-depreciated">musrgui (depreciated)</a></li>
-<li><a class="reference internal" href="#id12">Check the installation</a></li>
-<li><a class="reference internal" href="#potential-problems">Potential Problems</a></li>
-</ul>
-</li>
-<li><a class="reference internal" href="#mac-os-x-macos">Mac OS X / macOS</a><ul>
-<li><a class="reference internal" href="#requirements-macports">Requirements (MacPorts)</a><ul>
-<li><a class="reference internal" href="#index-28">Installation of NeXus requirements (optional)</a></li>
-<li><a class="reference internal" href="#index-29">ROOT</a></li>
-<li><a class="reference internal" href="#notes-on-macos-catalina">Notes on macOS Catalina</a></li>
-</ul>
-</li>
-<li><a class="reference internal" href="#requirements-fink">Requirements (Fink)</a><ul>
-<li><a class="reference internal" href="#index-31">Installation of NeXus requirements (optional)</a></li>
-<li><a class="reference internal" href="#index-32">ROOT</a></li>
-</ul>
-</li>
-<li><a class="reference internal" href="#index-33">musrfit</a><ul>
-<li><a class="reference internal" href="#index-34">musrfit build with cmake</a></li>
-<li><a class="reference internal" href="#id25">musrfit last step of the installation</a></li>
-</ul>
-</li>
-<li><a class="reference internal" href="#index-35">musredit</a></li>
-<li><a class="reference internal" href="#musrgui-obsolete">musrgui (obsolete)</a></li>
-<li><a class="reference internal" href="#id27">Check the installation</a></li>
-</ul>
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-</li>
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@@ -6,15 +6,15 @@
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     <meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
     
-    <title>Tutorial for musrfit &mdash; musrfit 1.7.4 documentation</title>
+    <title>Tutorial for musrfit &mdash; musrfit 1.7.6 documentation</title>
     
-    <link rel="stylesheet" href="_static/nature.css" type="text/css" />
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+        VERSION:     '1.7.6',
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         HAS_SOURCE:  true
@@ -24,32 +24,29 @@
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+    <link rel="top" title="musrfit 1.7.6 documentation" href="index.html" />
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+          <span>musrfit 1.7.6 documentation</span></a></h1>
-      <ul>
+        <h2 class="heading"><span>Tutorial for musrfit</span></h2>
-        <li class="right" style="margin-right: 10px">
+      </div>
-          <a href="genindex.html" title="General Index"
+      <div class="topnav">
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+      
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+        «&#160;&#160;<a href="cite.html">How to Cite <tt class="docutils literal"><span class="pre">musrfit</span></tt>?</a>
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+        </p>
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 <span id="index-0"></span><h1>Tutorial for <tt class="docutils literal"><span class="pre">musrfit</span></tt><a class="headerlink" href="#tutorial-for-musrfit" title="Permalink to this headline">¶</a></h1>
 <div class="section" id="single-histogram-fit-tutorial">
@@ -381,74 +378,22 @@ For a complete description please refer to the manuals of <a class="reference in
 </div>
 
 
-          </div>
-        </div>
       </div>
-      <div class="sphinxsidebar">
+      <div class="bottomnav">
-        <div class="sphinxsidebarwrapper">
+      
-  <h3><a href="index.html">Table Of Contents</a></h3>
+        <p>
-  <ul>
+        «&#160;&#160;<a href="cite.html">How to Cite <tt class="docutils literal"><span class="pre">musrfit</span></tt>?</a>
-<li><a class="reference internal" href="#">Tutorial for <tt class="docutils literal"><span class="pre">musrfit</span></tt></a><ul>
+        &#160;&#160;::&#160;&#160;
-<li><a class="reference internal" href="#single-histogram-fit-tutorial">Single-histogram-fit tutorial</a><ul>
+        <a class="uplink" href="index.html">Contents</a>
-<li><a class="reference internal" href="#the-msr-file">The msr file</a></li>
+        &#160;&#160;::&#160;&#160;
-<li><a class="reference internal" href="#determine-t0-and-the-data-range-using-musrt0">Determine t0 and the data range using musrt0</a></li>
+        <a href="user-manual.html">User manual</a>&#160;&#160;»
-<li><a class="reference internal" href="#fit-the-model-to-the-data-using-musrfit">Fit the model to the data using <tt class="docutils literal"><span class="pre">musrfit</span></tt></a></li>
+        </p>
-<li><a class="reference internal" href="#view-the-data-and-the-fit-using-musrview">View the data and the fit using <tt class="docutils literal"><span class="pre">musrview</span></tt></a></li>
-<li><a class="reference internal" href="#process-multiple-msr-files-using-msr2data">Process multiple msr files using <tt class="docutils literal"><span class="pre">msr2data</span></tt></a></li>
-<li><a class="reference internal" href="#further-reading">Further reading</a></li>
-</ul>
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doc/html/user-libs.html

@@ -6,15 +6,15 @@
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     <meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
     
-    <title>Documentation of user libs (user functions) &mdash; musrfit 1.7.4 documentation</title>
+    <title>Documentation of user libs (user functions) &mdash; musrfit 1.7.6 documentation</title>
     
-    <link rel="stylesheet" href="_static/nature.css" type="text/css" />
+    <link rel="stylesheet" href="_static/haiku.css" type="text/css" />
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+        VERSION:     '1.7.6',
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         HAS_SOURCE:  true
@@ -24,32 +24,29 @@
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+    <link rel="top" title="musrfit 1.7.6 documentation" href="index.html" />
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+        <h2 class="heading"><span>Documentation of user libs (user functions)</span></h2>
-        <li class="right" style="margin-right: 10px">
+      </div>
-          <a href="genindex.html" title="General Index"
+      <div class="topnav">
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+        </p>
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   <div class="section" id="documentation-of-user-libs-user-functions">
 <span id="user-libs"></span><span id="index-0"></span><h1>Documentation of user libs (user functions)<a class="headerlink" href="#documentation-of-user-libs-user-functions" title="Permalink to this headline">¶</a></h1>
 <div class="section" id="meissner-profiles-vortex-lattice-related-functions-bmw-libs">
@@ -600,74 +597,22 @@ K(m)&amp;=\int_0^{\pi/2}\frac{\mathrm d\varphi}{\sqrt{1-m^2\sin^2{\varphi}}},\en
 </div>
 
 
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-  <h3><a href="index.html">Table Of Contents</a></h3>
+        <p>
-  <ul>
+        «&#160;&#160;<a href="user-manual.html">User manual</a>
-<li><a class="reference internal" href="#">Documentation of user libs (user functions)</a><ul>
+        &#160;&#160;::&#160;&#160;
-<li><a class="reference internal" href="#meissner-profiles-vortex-lattice-related-functions-bmw-libs">Meissner-Profiles / Vortex-Lattice related functions (BMW libs)</a><ul>
+        <a class="uplink" href="index.html">Contents</a>
-<li><a class="reference internal" href="#libfitpofb">libFitPofB</a></li>
+        &#160;&#160;::&#160;&#160;
-</ul>
+        <a href="setup-standard.html">Setting up <tt class="docutils literal"><span class="pre">musrfit</span></tt> on Different Platforms</a>&#160;&#160;»
-</li>
+        </p>
-<li><a class="reference internal" href="#nonlocal-superconductivity-related-meissner-screening-functions-as-libs">Nonlocal superconductivity related Meissner screening functions (AS libs)</a></li>
-<li><a class="reference internal" href="#functions-to-analyze-bgr-nmr-data-bnmr-libs">Functions to analyze β-NMR data (BNMR libs)</a><ul>
-<li><a class="reference internal" href="#libbnmr">libBNMR</a></li>
-<li><a class="reference internal" href="#liblineprofile">libLineProfile</a></li>
-</ul>
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@@ -6,15 +6,15 @@
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   <div class="section" id="user-manual">
 <span id="index-0"></span><span id="id1"></span><h1>User manual<a class="headerlink" href="#user-manual" title="Permalink to this headline">¶</a></h1>
 <div class="section" id="introduction">
@@ -65,23 +62,28 @@
 <dl class="docutils">
 <dt><strong>&lt;msr-file&gt;</strong></dt>
 <dd>filename of the msr input file defining all the details needed for performing a fit to a specified set of data. This is the only mandatory parameter.</dd>
-<dt><strong>-k, - -keep-mn2-output</strong></dt>
+<dt><strong>-k, &#8211;keep-mn2-output</strong></dt>
 <dd>selects the option for keeping the output of <tt class="docutils literal"><span class="pre">MINUIT2</span></tt> including the correlation coefficients between different parameters and renaming the files <tt class="docutils literal"><span class="pre">MINUIT2.OUTPUT</span></tt> and <tt class="docutils literal"><span class="pre">MINUIT2.root</span></tt> to <tt class="docutils literal"><span class="pre">&lt;msr_file_without_extension&gt;-mn2.output</span></tt> and <tt class="docutils literal"><span class="pre">&lt;msr_file_without_extension&gt;-mn2.root</span></tt>, respectively, <em>e.g.</em> <tt class="docutils literal"><span class="pre">&lt;msr_file&gt;</span></tt> = <tt class="docutils literal"><span class="pre">8472.msr</span></tt> will result in <tt class="docutils literal"><span class="pre">8472-mn2.output</span></tt>, <tt class="docutils literal"><span class="pre">8472-mn2.root</span></tt>.</dd>
-<dt><strong>-c, - -chisq-only</strong></dt>
+<dt><strong>-c, &#8211;chisq-only</strong></dt>
 <dd>Instead of fitting the model, <tt class="docutils literal"><span class="pre">musrfit</span></tt> calculates <span class="math">\(\chi^2\)</span> or max. log-likelihood, maxLH, only once and sends the result to the standard output if called with this option. This is <em>e.g.</em> useful for the adjustment of the initial values of the fit parameters.</dd>
-<dt><strong>-t, - -title-from-data-file</strong></dt>
+<dt><strong>-t, &#8211;title-from-data-file</strong></dt>
 <dd>If this option is given <tt class="docutils literal"><span class="pre">musrfit</span></tt> will replace the title in the <tt class="docutils literal"><span class="pre">&lt;msr_file&gt;</span></tt> by the run title in the data file of the first run appearing in a RUN block. In case there is no run title in the data file no substitution is done.</dd>
-<dt><strong>-e, - -estimateN0</strong></dt>
+<dt><strong>-e, &#8211;estimateN0</strong></dt>
 <dd>estimate <span class="math">\(N_0\)</span> for single histogram fits.</dd>
-<dt><strong>-p, - -per-run-block-chisq</strong></dt>
+<dt><strong>-p, &#8211;per-run-block-chisq</strong></dt>
 <dd>will write per run block chisq/maxLH into the msr-file.</dd>
-<dt><strong>- -dump &lt;type&gt;</strong></dt>
+<dt><strong>-n, &#8211;no-of-cores-avail</strong></dt>
+<dd>print out how many cores are available (only vaild for OpenMP)</dd>
+<dt><strong>-u, &#8211;use-no-of-threads &lt;number&gt;</strong></dt>
+<dd>&lt;number&gt;: number of threads to be used (OpenMP). Needs to be &lt;= max. number of cores.
+If OpenMP is enable, the maximal number of cores is used, if it is not limited by this option.</dd>
+<dt><strong>&#8211;dump &lt;type&gt;</strong></dt>
 <dd>is writing a data file with the fit data and the theory; &lt;type&gt; can be ascii (data in columns) or root (data in ROOT histograms).</dd>
-<dt><strong>- -timeout &lt;timeout_tag&gt;</strong></dt>
+<dt><strong>&#8211;timeout &lt;timeout_tag&gt;</strong></dt>
 <dd>overwrites the predefined timeout of 3600 sec. &lt;timeout_tag&gt; <span class="math">\(\leq\)</span> 0 means the timeout facility is not enabled. &lt;timeout_tag&gt; &gt; 0, <em>e.g.</em> <tt class="docutils literal"><span class="pre">nn</span></tt> will set the timeout to <tt class="docutils literal"><span class="pre">nn</span></tt> (sec). If during a fit this timeout is reached, <tt class="docutils literal"><span class="pre">musrfit</span></tt> will terminate. This is used to prevent orphan <tt class="docutils literal"><span class="pre">musrfit</span></tt> processes to jam the system.</dd>
-<dt><strong>- -help</strong></dt>
+<dt><strong>&#8211;help</strong></dt>
 <dd>displays a small help notice in the shell explaining the basic usage of the program.</dd>
-<dt><strong>- -version</strong></dt>
+<dt><strong>&#8211;version</strong></dt>
 <dd>prints the version number of <tt class="docutils literal"><span class="pre">musrfit</span></tt></dd>
 </dl>
 <p>If called with a msr input file, <em>e.g.</em></p>
@@ -101,22 +103,22 @@
 <dl class="docutils">
 <dt><strong>&lt;msr_file&gt;</strong></dt>
 <dd>name of the msr input or output file to be displayed. This is the only mandatory parameter.</dd>
-<dt><strong>- -help</strong></dt>
+<dt><strong>&#8211;help</strong></dt>
 <dd>displays a small help notice in the shell explaining the basic usage of the program.</dd>
-<dt><strong>- -version</strong></dt>
+<dt><strong>&#8211;version</strong></dt>
 <dd>prints the version number of <tt class="docutils literal"><span class="pre">musrview</span></tt>.</dd>
-<dt><strong>-f, - -fourier</strong></dt>
+<dt><strong>-f, &#8211;fourier</strong></dt>
 <dd>will directly present the Fourier transform of the &lt;msr_file&gt; with Fourier options as defined in the &lt;msr_file&gt;.</dd>
-<dt><strong>-a, - -avg</strong></dt>
+<dt><strong>-a, &#8211;avg</strong></dt>
 <dd>will directly present the averaged data/Fourier of the &lt;msr_file&gt;.</dd>
-<dt><strong>-1, - -one_to_one</strong></dt>
+<dt><strong>-1, &#8211;one_to_one</strong></dt>
 <dd>calculate the theory points <em>only</em> at the data points.</dd>
-<dt><strong>- -&lt;graphic_format_extension&gt;</strong></dt>
+<dt><strong>&#8211;&lt;graphic_format_extension&gt;</strong></dt>
 <dd>will produce a graphics output file without starting a ROOT session. The filename is based on the name of the &lt;msr_file&gt;, <em>e.g.</em> 8472.msr will result in 8472_0.png.
 Supported values for <tt class="docutils literal"><span class="pre">&lt;graphic_format_extension&gt;</span></tt> are <em>eps</em>, <em>pdf</em>, <em>gif</em>, <em>jpg</em>, <em>png</em>, <em>svg</em>, <em>xpm</em>, and, <em>root</em>.</dd>
-<dt><strong>- -ascii</strong></dt>
+<dt><strong>&#8211;ascii</strong></dt>
 <dd>will generate an ascii dump of the data and theory as plotted.</dd>
-<dt><strong>- -timeout &lt;timeout&gt;</strong></dt>
+<dt><strong>&#8211;timeout &lt;timeout&gt;</strong></dt>
 <dd>&lt;timeout&gt; given in seconds after which <tt class="docutils literal"><span class="pre">musrview</span></tt> terminates. If &lt;timeout&gt; <span class="math">\(\leq\)</span> 0, no timeout will take place. Default for &lt;timeout&gt; is 0.</dd>
 </dl>
 <p>If called with a msr file and the <tt class="docutils literal"><span class="pre">--&lt;graphic_format_extension&gt;</span></tt> option, <em>e.g.</em></p>
@@ -175,55 +177,55 @@ Supported values for <tt class="docutils literal"><span class="pre">&lt;graphic_
 <dd><dl class="first last docutils">
 <dt><strong>&lt;msr_files&gt;</strong></dt>
 <dd>msr-file name(s). These msr-files are used for the Fourier transform. It can be a list of msr-files, <em>e.g.</em> <tt class="docutils literal"><span class="pre">musrFT</span> <span class="pre">3110.msr</span> <span class="pre">3111.msr</span></tt></dd>
-<dt><strong>-df, - -data-file &lt;data-file&gt;</strong></dt>
+<dt><strong>-df, &#8211;data-file &lt;data-file&gt;</strong></dt>
 <dd>This allows to feed only μSR data file(s) to perform the Fourier transform. Since the extended &lt;msr-file&gt; information are missing, they will need to be provided by to options, or <tt class="docutils literal"><span class="pre">musrFT</span></tt> tries to guess, based on <a class="reference internal" href="#musrfit-startup"><em>musrfit_startup.xml</em></a> settings.</dd>
 </dl>
 </dd>
 <dt><strong>Options</strong></dt>
 <dd><dl class="first last docutils">
-<dt><strong>- -help</strong></dt>
+<dt><strong>&#8211;help</strong></dt>
 <dd>display a help and exit.</dd>
-<dt><strong>- -version</strong></dt>
+<dt><strong>&#8211;version</strong></dt>
 <dd>output version information and exit.</dd>
-<dt><strong>-g, - -graphic-format &lt;graphic-format-extension&gt;</strong></dt>
+<dt><strong>-g, &#8211;graphic-format &lt;graphic-format-extension&gt;</strong></dt>
 <dd>will produce a graphic-output-file without starting a root session. The name is based either on the &lt;msr-file&gt; or the &lt;data-file&gt;, <em>e.g.</em> <tt class="docutils literal"><span class="pre">3310.msr</span> <span class="pre">-&gt;</span> <span class="pre">3310_0.png</span></tt>. Supported graphic-format-extension: <em>eps</em>, <em>pdf</em>, <em>gif</em>, <em>jpg</em>, <em>png</em>, <em>svg</em>, <em>xpm</em>, and <em>root</em>.</dd>
-<dt><strong>- -dump &lt;fln&gt;</strong></dt>
+<dt><strong>&#8211;dump &lt;fln&gt;</strong></dt>
 <dd>rather than starting a root session and showing Fourier graphs of the data, it will output the Fourier data in an ascii file &lt;fln&gt;.</dd>
-<dt><strong>-br, - -background-range &lt;start&gt; &lt;end&gt;</strong></dt>
+<dt><strong>-br, &#8211;background-range &lt;start&gt; &lt;end&gt;</strong></dt>
 <dd>background interval used to estimate the background to be subtracted before the Fourier transform. &lt;start&gt;, &lt;end&gt; to be given in bins.</dd>
-<dt><strong>-bg, - -background</strong></dt>
+<dt><strong>-bg, &#8211;background</strong></dt>
 <dd>gives the background explicit for each histogram.</dd>
-<dt><strong>-fo, - -fourier-option &lt;fopt&gt;</strong></dt>
+<dt><strong>-fo, &#8211;fourier-option &lt;fopt&gt;</strong></dt>
 <dd>&lt;fopt&gt; can be &#8216;<em>real</em>&#8216;, &#8216;<em>imag</em>&#8216;, &#8216;<em>real+imag</em>&#8216;, &#8216;<em>power</em>&#8216;, or &#8216;<em>phase</em>&#8216;. If this is not defined (neither on the command line nor in the <a class="reference internal" href="#musrfit-startup"><em>musrfit_startup.xml</em></a>) &#8216;<em>power</em>&#8216; will be used.</dd>
-<dt><strong>-ap, - -apodization &lt;val&gt;</strong></dt>
+<dt><strong>-ap, &#8211;apodization &lt;val&gt;</strong></dt>
 <dd>&lt;val&gt; can be either &#8216;<em>none</em>&#8216;, &#8216;<em>weak</em>&#8216;, &#8216;<em>medium</em>&#8216;, &#8216;<em>strong</em>&#8216;. Default will be &#8216;<em>none</em>&#8216;.</dd>
-<dt><strong>-fp, - -fourier-power &lt;N&gt;</strong></dt>
+<dt><strong>-fp, &#8211;fourier-power &lt;N&gt;</strong></dt>
 <dd>&lt;N&gt; being the Fourier power, i.e. <tt class="docutils literal"><span class="pre">2^&lt;N&gt;</span></tt> used for zero padding. Default is -1, i.e. <em>no</em> zero padding will be performed.</dd>
-<dt><strong>-u, - -units &lt;units&gt;</strong></dt>
+<dt><strong>-u, &#8211;units &lt;units&gt;</strong></dt>
 <dd>&lt;units&gt; is used to define the abscissa of the Fourier transform. One may choose between the fields (<em>Gauss</em>) or (<em>Tesla</em>), the frequency (<em>MHz</em>), and the angular-frequency domain (<em>Mc/s</em>). Default will be &#8216;<em>MHz</em>&#8216;.</dd>
-<dt><strong>-ph, - -phase &lt;val&gt;</strong></dt>
+<dt><strong>-ph, &#8211;phase &lt;val&gt;</strong></dt>
 <dd>defines the initial phase &lt;val&gt;. This only is of concern for &#8216;<em>real</em>&#8216;, &#8216;<em>imag</em>&#8216;, and &#8216;<em>real+imag</em>&#8216;. Default will be 0.0.</dd>
-<dt><strong>-fr, - -fourier-range &lt;start&gt; &lt;end&gt;</strong></dt>
+<dt><strong>-fr, &#8211;fourier-range &lt;start&gt; &lt;end&gt;</strong></dt>
 <dd>Fourier range. &lt;start&gt;, &lt;end&gt; are interpreted in the units given. Default will be -1.0 for both which means, take the full Fourier range.</dd>
-<dt><strong>-tr, - -time-range &lt;start&gt; &lt;end&gt;</strong></dt>
+<dt><strong>-tr, &#8211;time-range &lt;start&gt; &lt;end&gt;</strong></dt>
 <dd>time domain range to be used for Fourier transform. &lt;start&gt;, &lt;end&gt; are to be given in (μs). If nothing is provided, the full time range found in the data file(s) will be used.</dd>
-<dt><strong>- -histo &lt;list&gt;</strong></dt>
+<dt><strong>&#8211;histo &lt;list&gt;</strong></dt>
 <dd>give the &lt;list&gt; of histograms to be used for the Fourier transform. <em>E.g.</em> <tt class="docutils literal"><span class="pre">musrFT</span> <span class="pre">-df</span> <span class="pre">lem15_his_01234.root</span> <span class="pre">--histo</span> <span class="pre">1</span> <span class="pre">3</span></tt>, will only be needed together with the option <tt class="docutils literal"><span class="pre">--data-file</span></tt>. If multiple data files are given, &lt;list&gt; will apply to all data-files given. If <tt class="docutils literal"><span class="pre">--histo</span></tt> is not given, <em>all</em> histos of a data file will be used. &lt;list&gt; can be anything like: 2 3 6, or 2-17, or 1-6 9, etc.</dd>
-<dt><strong>-a, - -average</strong></dt>
+<dt><strong>-a, &#8211;average</strong></dt>
 <dd>show the average of all <strong>ALL</strong> Fourier transformed data.</dd>
-<dt><strong>-ad, - -average-per-data-set</strong></dt>
+<dt><strong>-ad, &#8211;average-per-data-set</strong></dt>
 <dd>show the average of <strong>per-data-set</strong> Fourier transformed data.</dd>
 <dt><strong>- -t0 &lt;list&gt;</strong></dt>
 <dd>A list of t0&#8217;s can be provided. This in conjunction with <tt class="docutils literal"><span class="pre">--data-file</span></tt> and <tt class="docutils literal"><span class="pre">--fourier-option</span> <span class="pre">real</span></tt> allows to get the proper initial phase if t0&#8217;s are known. If a single t0 for multiple histos is given, it is assume, that this t0 is common to <em>all</em> histos. Example: <tt class="docutils literal"><span class="pre">musrFT</span> <span class="pre">-df</span> <span class="pre">lem15_his_01234.root</span> <span class="pre">-fo</span> <span class="pre">real</span> <span class="pre">--t0</span> <span class="pre">2750</span> <span class="pre">--histo</span> <span class="pre">1</span> <span class="pre">3</span></tt>.</dd>
-<dt><strong>-pa, - -packing &lt;N&gt;</strong></dt>
+<dt><strong>-pa, &#8211;packing &lt;N&gt;</strong></dt>
 <dd>if &lt;N&gt; (an integer), the time domain data will first be packed/rebinned by &lt;N&gt;.</dd>
-<dt><strong>- -title &lt;title&gt;</strong></dt>
+<dt><strong>&#8211;title &lt;title&gt;</strong></dt>
 <dd>give a global title for the plot.</dd>
-<dt><strong>- -create-msr-file &lt;fln&gt;</strong></dt>
+<dt><strong>&#8211;create-msr-file &lt;fln&gt;</strong></dt>
 <dd>creates a msr-file based on the command line options provided. This will help on the way to a full fitting model.</dd>
-<dt><strong>-lc, - -lifetimecorrection &lt;fudge&gt;</strong></dt>
+<dt><strong>-lc, &#8211;lifetimecorrection &lt;fudge&gt;</strong></dt>
 <dd>try to eliminate the muon life time decay. Only makes sense for low transverse fields. &lt;fudge&gt; is a tweaking factor (scaling factor for the estimated t0) and should be kept around 1.0.</dd>
-<dt><strong>- -timeout &lt;timeout&gt;</strong></dt>
+<dt><strong>&#8211;timeout &lt;timeout&gt;</strong></dt>
 <dd>&lt;timeout&gt; given in seconds after which <tt class="docutils literal"><span class="pre">musrFT</span></tt> terminates. If &lt;timeout&gt; <span class="math">\(\leq\)</span> 0, no timeout will take place. Default &lt;timeout&gt; is 3600 sec.</dd>
 </dl>
 </dd>
@@ -277,13 +279,13 @@ Supported values for <tt class="docutils literal"><span class="pre">&lt;graphic_
 <dl class="docutils">
 <dt><strong>&lt;msr_file&gt;</strong></dt>
 <dd>name of an msr file.</dd>
-<dt><strong>-g, - -getT0FromPromptPeak [&lt;firstGoodBinOffset&gt;]</strong></dt>
+<dt><strong>-g, &#8211;getT0FromPromptPeak [&lt;firstGoodBinOffset&gt;]</strong></dt>
 <dd>tries to estimate t0 from the prompt peak (maximum entry) in each histogram and writes the corresponding values to the t0 lines in the <a class="reference internal" href="#msr-run-block"><em>RUN blocks</em></a> of the msr file. If an optional number &lt;firstGoodBinOffset&gt; is given, the lower limit of the data range will be set to t0 + &lt;firstGoodBinOffset&gt;.</dd>
-<dt><strong>- -timeout &lt;timeout&gt;</strong></dt>
+<dt><strong>&#8211;timeout &lt;timeout&gt;</strong></dt>
 <dd>&lt;timeout&gt; given in seconds after which musrview terminates. If &lt;timeout&gt; <span class="math">\(\leq\)</span> 0, no timeout will take place. Default for &lt;timeout&gt; is 0.</dd>
-<dt><strong>- -help</strong></dt>
+<dt><strong>&#8211;help</strong></dt>
 <dd>displays a small help notice in the shell explaining the basic usage of the program.</dd>
-<dt><strong>- -version</strong></dt>
+<dt><strong>&#8211;version</strong></dt>
 <dd>prints the version number of musrt0.</dd>
 </dl>
 <p>The interactive mode of <tt class="docutils literal"><span class="pre">musrt0</span></tt> is started if the program is called with a sole msr-file argument, <em>e.g.</em></p>
@@ -327,7 +329,7 @@ Supported values for <tt class="docutils literal"><span class="pre">&lt;graphic_
 <dd>input WKM msr file (mandatory first parameter).</dd>
 <dt><strong>&lt;msr_file_out&gt;</strong></dt>
 <dd>converted output musrfit msr file (mandatory second parameter).</dd>
-<dt><strong>- -help</strong></dt>
+<dt><strong>&#8211;help</strong></dt>
 <dd>displays a small help notice in the shell explaining the basic usage of the program.</dd>
 </dl>
 <p>A typical example then looks like:</p>
@@ -410,13 +412,13 @@ Supported values for <tt class="docutils literal"><span class="pre">&lt;graphic_
 <span id="index-9"></span><h3>dump_header<a class="headerlink" href="#dump-header" title="Permalink to this headline">¶</a></h3>
 <p><tt class="docutils literal"><span class="pre">dump_header</span></tt> is a little program which tries to read a μSR data file and sends the relevant information (required header info, start of the histos, etc.) to the standard output. Currently the following μSR data file formats are supported: <em>MusrROOT</em>, <em>ROOT</em> (old LEM format), <em>PSI-BIN</em>, <em>PSI-MDU</em>, <em>NeXus</em> (IDF1 and IDF2), <em>MUD</em>, and <em>WKM</em>.</p>
 <dl class="docutils">
-<dt><strong>-rn, - -runNo &lt;runNo&gt;</strong></dt>
+<dt><strong>-rn, &#8211;runNo &lt;runNo&gt;</strong></dt>
 <dd>run number of the header to be dumped.</dd>
-<dt><strong>-fn, - -fileName &lt;fileName&gt;</strong></dt>
+<dt><strong>-fn, &#8211;fileName &lt;fileName&gt;</strong></dt>
 <dd>muSR data file name.</dd>
-<dt><strong>-ff, - -fileFormat &lt;fileFormat&gt;</strong></dt>
+<dt><strong>-ff, &#8211;fileFormat &lt;fileFormat&gt;</strong></dt>
 <dd>where &lt;fileFormat&gt; is one of the above listed ones.</dd>
-<dt><strong>-y, - -year &lt;year&gt;</strong></dt>
+<dt><strong>-y, &#8211;year &lt;year&gt;</strong></dt>
 <dd>&lt;year&gt; has to be a 4 digit value, <em>e.g.</em> 2005, if provided it is used to generate the file name for the given &lt;runNo&gt;, otherwise the current year is used. If a file name is given, this option has no effect.</dd>
 <dt><strong>-s, &#8211;summary</strong></dt>
 <dd>this option is used for LE-μSR data sets only. It will, additionally to the header information, print the summary file content.</dd>
@@ -2601,107 +2603,22 @@ here:</p>
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+        «&#160;&#160;<a href="tutorial.html">Tutorial for <tt class="docutils literal"><span class="pre">musrfit</span></tt></a>
-<li><a class="reference internal" href="#">User manual</a><ul>
+        &#160;&#160;::&#160;&#160;
-<li><a class="reference internal" href="#introduction">Introduction</a></li>
+        <a class="uplink" href="index.html">Contents</a>
-<li><a class="reference internal" href="#available-executables-configuration-files-and-their-basic-usage">Available Executables, Configuration Files and their Basic Usage</a><ul>
+        &#160;&#160;::&#160;&#160;
-<li><a class="reference internal" href="#musrfit">musrfit</a></li>
+        <a href="user-libs.html">Documentation of user libs (user functions)</a>&#160;&#160;»
-<li><a class="reference internal" href="#musrview">musrview</a></li>
+        </p>
-<li><a class="reference internal" href="#musrft">musrFT</a></li>
-<li><a class="reference internal" href="#musrt0">musrt0</a></li>
-<li><a class="reference internal" href="#msr2msr">msr2msr</a></li>
-<li><a class="reference internal" href="#msr2data">msr2data</a></li>
-<li><a class="reference internal" href="#any2many">any2many</a></li>
-<li><a class="reference internal" href="#dump-header">dump_header</a></li>
-<li><a class="reference internal" href="#musrfit-startup-xml">musrfit_startup.xml</a></li>
-</ul>
-</li>
-<li><a class="reference internal" href="#description-of-the-msr-file-format">Description of the msr File Format</a><ul>
-<li><a class="reference internal" href="#the-title">The Title</a></li>
-<li><a class="reference internal" href="#the-fitparameter-block">The FITPARAMETER Block</a></li>
-<li><a class="reference internal" href="#the-theory-block">The THEORY Block</a></li>
-<li><a class="reference internal" href="#the-functions-block">The FUNCTIONS Block</a></li>
-<li><a class="reference internal" href="#the-global-block">The GLOBAL Block</a></li>
-<li><a class="reference internal" href="#the-run-block">The RUN Block</a></li>
-<li><a class="reference internal" href="#the-commands-block">The COMMANDS Block</a></li>
-<li><a class="reference internal" href="#the-fourier-block">The FOURIER Block</a></li>
-<li><a class="reference internal" href="#the-plot-block">The PLOT Block</a></li>
-<li><a class="reference internal" href="#the-statistic-block">The STATISTIC Block</a></li>
-</ul>
-</li>
-<li><a class="reference internal" href="#fit-types">Fit Types</a><ul>
-<li><a class="reference internal" href="#single-histogram-fit-fit-type-0">Single Histogram Fit (fit type 0)</a></li>
-<li><a class="reference internal" href="#single-histogram-rrf-fit-fit-type-1">Single Histogram RRF Fit (fit type 1)</a></li>
-<li><a class="reference internal" href="#asymmetry-fit-fit-type-2">Asymmetry Fit (fit type 2)</a></li>
-<li><a class="reference internal" href="#asymmetry-rrf-fit-fit-type-3">Asymmetry RRF Fit (fit type 3)</a></li>
-<li><a class="reference internal" href="#negative-muon-mgrsr-fit-fit-type-4">Negative Muon μSR Fit (fit type 4)</a></li>
-<li><a class="reference internal" href="#beta-nmr-asymmetry-fit-fit-type-5">beta-NMR Asymmetry Fit (fit type 5)</a></li>
-<li><a class="reference internal" href="#non-mgrsr-fit-fit-type-8">Non-μSR Fit (fit type 8)</a></li>
-</ul>
-</li>
-<li><a class="reference internal" href="#id38">User Functions</a><ul>
-<li><a class="reference internal" href="#user-function-without-global-user-function-object-access">User Function without global user-function-object access</a></li>
-<li><a class="reference internal" href="#user-function-with-global-user-function-object-access">User Function with global user-function-object access</a></li>
-<li><a class="reference internal" href="#rge-file-handler-for-low-energy-mgrsr">rge-file handler for Low-Energy μSR</a></li>
-</ul>
-</li>
-<li><a class="reference internal" href="#technical-description-of-the-musrfit-framework">Technical Description of the musrfit framework</a></li>
-</ul>
-</li>
-</ul>
 
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