436 lines
16 KiB
HTML
436 lines
16 KiB
HTML
<!DOCTYPE html>
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<html class="mcss">
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<head>
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<meta http-equiv="Content-type" content="text/html;charset=UTF-8">
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<link rel="stylesheet" href="ZGUI.css">
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<link rel="stylesheet" href="https://www.w3schools.com/w3css/4/w3.css">
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<script src="TrimSPlib.js"></script>
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<script src="TrimSPelec.js"></script>
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<script src="myplots.js"></script>
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<script type="text/javascript">
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const ipcRenderer = require('electron').ipcRenderer;
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const fs = require('fs');
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const exec = require('child_process').execSync;
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const remote = require('electron').remote;
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</script>
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<title>Trim.SP</title>
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</head>
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<body onresize="resizePl()" onload="adjust_table();adjust_scans();">
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<table style="width: 100%;">
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<tr><td>
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<div class="col-full">
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<div class="tab">
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<button class="tablinks" onclick="openTab(event,'Layers')" id="btnLayers">Layers</button>
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<button class="tablinks" onclick="openTab(event,'Scans')" id="btnScans">Scans</button>
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<button class="tablinks" onclick="openTab(event,'Plots')" id="btnPlots">Plots</button>
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<button class="tablinks" onclick="openTab(event,'Other')" id="btnOther">Other Parameters</button>
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</div>
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<div id="Layers" class="tabcontent">
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<table style="width: 100%;">
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<tr>
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<td style="vertical-align: top;">
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<table cellpadding="5">
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<tr>
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<td><label>File name prefix:</label></td>
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<td>
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<input name="fileNamePrefix" id="fileNamePrefix" type="text" style="width:70%" value="SrTiO3"/>
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<input name="trimPath" id="trimPath" type="text" style="width:70%;visibility:hidden;"/>
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</td>
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</tr>
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<tr>
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<td><label>Save folder:</label></td>
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<td>
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<input type="text" style="width:70%" id="workPath" name="workPath" readonly/>
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<input type="button" value="Browse"
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id="browseFolde" onclick="ipcRenderer.send('browseFolder');">
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</td>
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</tr>
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<td><label>Number of Layers:</label></td>
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<td><input name="numLayer" id="numLayer" type="number" size="3" step="1" min="1" max="100" value="1" onchange="adjust_table()"></td>
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</tr>
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<tr><td colspan="2">
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<table id="LTable" border="2" cellpadding="10">
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<tr><td><b>Layer #</b></td><td><b>Composition</b></td><td><b>Density [g/cm<sup>3</sup>]</b></td><td><b>Thickness [Å]</b></td></tr>
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</table>
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</td></tr>
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</table>
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</td>
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<td style="vertical-align: top;">
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<table cellpadding="5">
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<tr><td collspan="2"><b>Projectile parameters</b></td></tr>
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<tr><td>Projectile</td>
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<td><select name="ProjType" id="ProjType" onchange="ProjSmartDefaults()" onload="ProjSmartDefaults()">
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<option selected="selected" value="muon">muon</option>
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<option value="lithium-8">lithium-8</option>
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<option value="boron-12">boron-12</option>
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<option value="magnesium-31">magnesium-31</option>
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<option value="H">H</option>
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<option value="He">He</option>
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</select>
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</td>
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</tr>
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<tr><td>Number of projectiles</td>
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<td><input name="numberProj" id="numberProj" type="text" size="7" value="1000" onchange="//ProjNumberLimit()"></td>
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</tr>
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<tr><td>Starting depth [Å]</td><td><input name="z0" id="z0" type="text" size="7" value="0"></td></tr>
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<tr><td>Depth increment [Å]</td><td><input name="dz" id="dz" type="text" size="7" value="20"></td></tr>
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<tr><td>Energy [eV]</td><td><input name="valEnergy" id="valEnergy" type="text" size="7" value="2000"></td></tr>
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<tr><td>Energy sigma [eV]</td><td><input name="sigEnergy" id="sigEnergy" type="text" size="7" value="450"></td></tr>
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<tr><td>Angle [deg]</td><td><input name="valAngle" id="valAngle" type="text" size="7" value="0"></td></tr>
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<tr><td>Angle sigma [deg]</td><td><input name="sigAngle" id="sigAngle" type="text" size="7" value="15"></td></tr>
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<tr><td>Random seed</td><td><input name="ranSeed" id="ranSeed" type="text" size="7" value="78741"></td></tr>
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<tr><td><button onclick="document.getElementById('btnPlots').click();tester();">Start</button></td><td></td></tr>
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</table>
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</td>
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</tr>
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</table>
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</div>
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<div id="Scans" class="tabcontent">
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<input type="checkbox" name="scanSeq" id="scanSeq" onChange="adjust_scans();"> Enable scan on
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<select name="scanType" id="scanType" onchange="adjust_scans();">
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<option value="scanLoop">Loop</option>
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<option value="scanVals">Set of values</option>
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</select>
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<div id="ScansLine" style="visibility: hidden;">
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<br>Set of values: <input name="scanList" id="scanList" type="text" value="1000">
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Corresponding depth increment: <input name="scanListdz" id="scanListdz" type="text" value="">
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</div>
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<table id="ScansTable" style="width: 100%;visibility: hidden;">
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<tr>
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<td colspan="3">Scan parameter
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<select name="comboScan" id="comboScan" onchange="">
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<option value="EScan">Energy [eV]</option>
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<option value="SigEScan">Energy sigma [eV]</option>
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<option value="AngleScan">Angle [deg]</option>
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<option value="SigAngleScan">Angle sigma [deg]</option>
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<option value="NProjScan">Number of projectiles</option>
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<option value="dScan">Thickness of layer # 1</option>
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</select>
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</td>
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</tr>
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<tr>
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<td>
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<!input type="radio" name="ScanType" value="Loop" checked onChange="">
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<!input type="radio" name="ScanType" value="ScanList" onChange="">
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From: <input name="scanFrom" id="scanFrom" type="text" value="1000">
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</td>
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<td>
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Step: <input name="scanStep" id="scanStep" type="text" value="2000">
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</td>
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<td>
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To: <input name="scanTo" id="scanTo" type="text" value="14000">
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</td>
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</tr>
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</table>
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</div>
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<div id="Plots" class="tabcontent">
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<table style="width: 100%;">
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<tr>
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<td align="center"><div id="plotRge"><!-- Plotly chart will be drawn inside this DIV --></div></td>
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<td align="center"><div id="plotFrac"><!-- Plotly chart will be drawn inside this DIV --></div></td>
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</tr>
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</table>
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</div>
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<div id="Other" class="tabcontent">
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<table cellpadding="5">
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<tr>
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<td>
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<details>
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<summary>EF</summary>
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Cutoff energy of projectiles (in eV);
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must be greater than zero.
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Used for low projectile energies (< 1000 eV) and ESB = 0.
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EF should be of the order of ~0.2 eV,
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but not above SBE (for sputtering data).
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With increasing projectile energy,
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EF can be increased to save computing time.
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</details>
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</td>
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<td>
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<input name="parEF" id="parEF" type="number" size="7" step="0.1" value="0.5">
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</td>
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<td>
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<details>
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<summary>KK0</summary>
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Maximum order of weak (simultaneous) collisions between projectile and target atoms:
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<ol>
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<li value="0">No weak collisions included.</li>
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<li value="1">???</li>
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<li value="2">Sufficient for most calculations.</li>
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<li value="3">Only useful for very heavy particles; increases computing time.</li>
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<li value="4">Only useful for very heavy particles; increases computing time.</li>
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</ol>
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</details>
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</td>
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<td>
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<input name="parKK0" id="parKK0" type="number" step="1" min="0" max="4" value="2">
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</td>
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</tr>
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<tr>
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<td>
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<details>
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<summary>ESB</summary>
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Surface binding energy for projectiles (in eV).
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This value is zero for the noble gases,
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but ESB should be larger than zero if the projectile is an active
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chemically species.
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ESB = SBE for self-sputtering calculations.
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</details>
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</td>
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<td>
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<input name="parESB" id="parESB" type="number" size="7" step="0.1" value="0.0">
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</td>
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<td>
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<details>
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<summary>KK0R</summary>
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Maximum order of weak (simultaneous) collisions between target atoms:
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<ol>
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<li value="0">No weak collisions included.</li>
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<li value="1">???</li>
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<li value="2">Sufficient for most calculations.</li>
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<li value="3">Only useful for very heavy particles; increases computing time.</li>
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<li value="4">Only useful for very heavy particles; increases computing time.</li>
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</ol>
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</details>
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</td>
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<td>
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<input name="parKK0R" id="parKK0R" type="number" step="1" min="0" max="4" value="2">
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</td>
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</tr>
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<tr>
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<td>
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<details>
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<summary>SHEATH</summary>
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Sheath potential (in eV);
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typically 3 * kT (i.e., 3 * |projectile energy|).
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</details>
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</td>
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<td>
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<input name="parSHEATH" id="parSHEATH" type="number" size="7" step="0.1" value="0.0">
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</td>
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<td>
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<details>
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<summary>KDEE1</summary>
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Inelastic energy loss model for projectiles:
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<ol>
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<li value="1">Nonlocal (Lindhard-Scharff).</li>
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<li value="2">Local (Oen-Robinson).</li>
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<li value="3">
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Equipartition of local and nonlocal models (i.e., options 1 & 2).
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</li>
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<li value="4">
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Nonlocal (Anderson-Ziegler tables for hydrogen);
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must be used for hydrogen-like projectile with energies > 10 keV.
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</li>
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<li value="5">
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Nonlocal (Ziegler tables for helium);
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must be used for helium-like projectiles with energies > 50 keV.
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</li>
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</ol>
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Note: options 1, 2, and 3 can only be used at energies below the stopping power maximum.
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</details>
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</td>
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<td>
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<input name="parKDEE1" id="parKDEE1" type="number" step="1" min="1" max="5" value="4">
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</td>
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</tr>
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<tr>
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<td>
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<details>
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<summary>ERC</summary>
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Recoil cutoff energy (in eV);
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usually equal to the surface binding energy.
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</details>
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</td>
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<td>
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<input name="parERC" id="parERC" type="number" size="7" step="0.1" value="0.0">
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</td>
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<td>
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<details>
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<summary>KDEE2</summary>
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Inelastic energy loss for target atoms:
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<ol>
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<li value="1">Nonlocal (Lindhard-Scharff).</li>
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<li value="2">Local (Oen-Robinson).</li>
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<li value="3">
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Equipartition of local and nonlocal models (i.e., options 1 & 2).
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</li>
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</ol>
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Note: options 1, 2, and 3 can only be used at energies below the stopping power maximum.
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</details>
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</td>
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<td>
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<input name="parKDEE2" id="parKDEE2" type="number" step="1" min="1" max="3" value="3">
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</td>
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</tr>
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<tr>
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<td>
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<details>
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<summary>RD</summary>
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Depth (in Å) to which recoils are followed.
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RD = 50 is usually sufficient for sputtering
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(if the projectile energy is not too high).
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Use RD = 100 * CW (i.e., the depth increment)
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for following the full collision cascade.
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</details>
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</td>
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<td>
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<input name="parRD" id="parRD" type="number" size="7" step="0.1" value="50.0">
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</td>
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<td>
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<details>
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<summary>IPOT</summary>
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Interaction potential between projectile and target atoms:
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<ol>
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<li value="1">Krypton-Carbon (Kr-C) potential.</li>
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<li value="2">Molière potential.</li>
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<li value="3">Ziegler-Biersack-Littmark (ZBL) potential.</li>
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</ol>
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</details>
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</td>
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<td>
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<input name="parIPOT" id="parIPOT" type="number" step="1" min="1" max="3" value="2">
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</td>
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</tr>
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<tr>
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<td>
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<details>
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<summary>CA</summary>
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Correction factor to the Firsov screening length for
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collisions between projectile and target atoms
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(only used in the application of the Molière potential);
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usually on the order of ~1.0.
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</details>
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</td>
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<td>
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<input name="parCA" id="parCA" type="number" size="7" step="0.1" value="1.0">
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</td>
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<td>
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<details>
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<summary>IPOTR</summary>
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Interaction potential between target atoms:
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<ol>
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<li value="1">Krypton-Carbon (Kr-C) potential.</li>
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<li value="2">Molière potential.</li>
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<li value="3">Ziegler-Biersack-Littmark (ZBL) potential.</li>
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</ol>
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</details>
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</td>
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<td>
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<input name="parIPOTR" id="parIPOTR" type="number" step="1" min="0" max="3" value="1">
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</td>
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</tr>
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<tr>
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<td></td>
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<td></td>
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<td>
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<details>
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<summary>IRL</summary>
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Collision recoils:
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<ol>
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<li value="0">
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No recoils are generated (i.e., no sputtering effects);
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used to speed up the calculation if only projectile ranges are of interest.
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</li>
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<li value="1">Calculate collision recoils.</li>
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</ol>
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</details>
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</td>
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<td>
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<input name="parIRL" id="parIRL" type="number" step="1" min="0" max="1" value="0">
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</td>
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</tr>
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</table>
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<p>
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For further details see:
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</p>
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<p>
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W. Eckstein, <i>Computer Simulation of Ion-Solid Interactions</i>,<br>
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Springer Series in Materials Science, Vol. 10 (Springer-Verlag, Berlin, 1991).<br>
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<a href="https://doi.org/10.1007/978-3-642-73513-4">
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https://doi.org/10.1007/978-3-642-73513-4
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</a>
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</p>
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</div>
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</div>
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</td></tr>
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<!tr>
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<!td>
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<!progress id="myBar" max=100 min=0><!/progress>
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<!/td>
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<!/tr>
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</table>
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</body>
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<script>
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document.getElementById("trimPath").value = remote.getGlobal('path');
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// Catch calls for open file
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ipcRenderer.on('openFile', function(event, filename) {
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console.log('Open file '+filename);
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fs.readFile(filename.toString(), function read(err, data) {
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if (err) {
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throw err;
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}
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setValues(data);
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});
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});
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let workPath = document.getElementById("workPath");
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// If empty or undefined use local folder as default
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if (workPath.value == '' || workPath.value == undefined ) {
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// workPath.value = process.cwd();
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workPath.value = '/tmp';
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//app.setPath('temp',process.cwd());
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}
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// Catch calls for selectfolder
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ipcRenderer.on('selectFolder', function(event, foldername) {
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if (foldername.length != 0) {
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document.getElementById("workPath").value = foldername[0];
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// Change process directory
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process.chdir(foldername[0]);
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}
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console.log("currentdir",process.cwd());
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});
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// Catch calls for save as
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ipcRenderer.on('saveFile', function(event, filename) {
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// If filename is empty use default value
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if (filename == '') {filename='TrimSP.cfg';}
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// Get values from all fields and prepare config file
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let trimSPcfg=prep_cfg(0);
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// Save file to filename
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console.log('Save file to '+filename);
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try { fs.writeFileSync(filename, trimSPcfg, 'utf-8'); }
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catch(e) { alert('Failed to save the file !'); }
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});
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// Catch calls for plotProf
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ipcRenderer.on('plotProf', function(event, filename) {
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console.log("filename="+filename);
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plotProfiles(filename);
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});
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// Catch calls for plotFrac
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ipcRenderer.on('plotFrac', function(event, filename) {
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console.log("filename="+filename);
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plotFractions(filename);
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});
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// Catch calls for plotMean
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ipcRenderer.on('plotMean', function(event, filename) {
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console.log("filename="+filename);
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plotMean(filename);
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});
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// Catch clicks for Browse button
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ipcRenderer.on('browseFolder', function(event, foldername) {
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if (foldername.length != 0) {
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document.getElementById("workPath").value = foldername[0];
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// Change process directory
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process.chdir(foldername[0]);
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}
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});
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// Get the element with id="defaultOpen" and click on it
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document.getElementById("btnLayers").click();
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|
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</script>
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</html>
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