Hans-Nikolai Viessmann
bde174b726
refactor CSCS and Meg content add merlin6 quick start update merlin6 nomachine docs give the userdoc its own color scheme we use the Materials default one refactored slurm general docs merlin6 add merlin6 JB docs add software support m6 docs add all files to nav vibed changes #1 add missing pages further vibing #2 vibe #3 further fixes
2.2 KiB
2.2 KiB
title, keywords, last_updated, summary, sidebar, permalink
| title | keywords | last_updated | summary | sidebar | permalink |
|---|---|---|---|---|---|
| Slurm Examples | slurm example, template, examples, templates, running jobs, sbatch, single core based jobs, HT, multithread, no-multithread, mpi, openmp, packed jobs, hands-on, array jobs, gpu | 24 Mai 2023 | This document shows different template examples for running jobs in the Merlin cluster. | merlin7_sidebar | /merlin7/slurm-examples.html |
Single core based job examples
#!/bin/bash
#SBATCH --partition=hourly # Using 'hourly' will grant higher priority
#SBATCH --ntasks-per-core=2 # Request the max ntasks be invoked on each core
#SBATCH --hint=multithread # Use extra threads with in-core multi-threading
#SBATCH --time=00:30:00 # Define max time job will run
#SBATCH --output=myscript.out # Define your output file
#SBATCH --error=myscript.err # Define your error file
module purge
module load $MODULE_NAME # where $MODULE_NAME is a software in PModules
srun $MYEXEC # where $MYEXEC is a path to your binary file
Multi-core based jobs example
Pure MPI
#!/bin/bash
#SBATCH --job-name=purempi
#SBATCH --partition=daily # Using 'daily' will grant higher priority
#SBATCH --time=24:00:00 # Define max time job will run
#SBATCH --output=%x-%j.out # Define your output file
#SBATCH --error=%x-%j.err # Define your error file
#SBATCH --exclusive
#SBATCH --nodes=1
#SBATCH --ntasks=128
#SBATCH --hint=nomultithread
##SBATCH --cpus-per-task=1
module purge
module load $MODULE_NAME # where $MODULE_NAME is a software in PModules
srun $MYEXEC # where $MYEXEC is a path to your binary file
Hybrid
#!/bin/bash
#SBATCH --job-name=hybrid
#SBATCH --partition=daily # Using 'daily' will grant higher priority
#SBATCH --time=24:00:00 # Define max time job will run
#SBATCH --output=%x-%j.out # Define your output file
#SBATCH --error=%x-%j.err # Define your error file
#SBATCH --exclusive
#SBATCH --nodes=1
#SBATCH --ntasks=128
#SBATCH --hint=multithread
#SBATCH --cpus-per-task=2
module purge
module load $MODULE_NAME # where $MODULE_NAME is a software in PModules
srun $MYEXEC # where $MYEXEC is a path to your binary file