High Performance Computing and Emerging Technologies Group

cryosparc_master (latest)

Published 2025-04-22 14:46:24 +02:00 by viessm_h

Installation

docker pull gitea.psi.ch/hpce/cryosparc_master:latest
sha256:2cd8d7377325adeeedf4475a783bb3f0d59b07576fdbc3726eaffd8afba9ea43

Image Layers

ARG RELEASE
ARG LAUNCHPAD_BUILD_ARCH
LABEL org.opencontainers.image.ref.name=ubuntu
LABEL org.opencontainers.image.version=22.04
ADD file:0ad2ee2cfb186802f49c9bf4148674d1c6fc201f83478ec01ffaa7086d491323 in /
CMD ["/bin/bash"]
ENV NVARCH=x86_64
ENV NVIDIA_REQUIRE_CUDA=cuda>=11.8 brand=tesla,driver>=450,driver<451 brand=tesla,driver>=470,driver<471 brand=unknown,driver>=470,driver<471 brand=nvidia,driver>=470,driver<471 brand=nvidiartx,driver>=470,driver<471 brand=geforce,driver>=470,driver<471 brand=geforcertx,driver>=470,driver<471 brand=quadro,driver>=470,driver<471 brand=quadrortx,driver>=470,driver<471 brand=titan,driver>=470,driver<471 brand=titanrtx,driver>=470,driver<471 brand=tesla,driver>=510,driver<511 brand=unknown,driver>=510,driver<511 brand=nvidia,driver>=510,driver<511 brand=nvidiartx,driver>=510,driver<511 brand=geforce,driver>=510,driver<511 brand=geforcertx,driver>=510,driver<511 brand=quadro,driver>=510,driver<511 brand=quadrortx,driver>=510,driver<511 brand=titan,driver>=510,driver<511 brand=titanrtx,driver>=510,driver<511 brand=tesla,driver>=515,driver<516 brand=unknown,driver>=515,driver<516 brand=nvidia,driver>=515,driver<516 brand=nvidiartx,driver>=515,driver<516 brand=geforce,driver>=515,driver<516 brand=geforcertx,driver>=515,driver<516 brand=quadro,driver>=515,driver<516 brand=quadrortx,driver>=515,driver<516 brand=titan,driver>=515,driver<516 brand=titanrtx,driver>=515,driver<516
ENV NV_CUDA_CUDART_VERSION=11.8.89-1
ENV NV_CUDA_COMPAT_PACKAGE=cuda-compat-11-8
ARG TARGETARCH
LABEL maintainer=NVIDIA CORPORATION <cudatools@nvidia.com>
RUN |1 TARGETARCH=amd64 /bin/sh -c apt-get update && apt-get install -y --no-install-recommends gnupg2 curl ca-certificates && curl -fsSLO https://developer.download.nvidia.com/compute/cuda/repos/ubuntu2204/${NVARCH}/cuda-keyring_1.0-1_all.deb && dpkg -i cuda-keyring_1.0-1_all.deb && apt-get purge --autoremove -y curl && rm -rf /var/lib/apt/lists/* # buildkit
ENV CUDA_VERSION=11.8.0
RUN |1 TARGETARCH=amd64 /bin/sh -c apt-get update && apt-get install -y --no-install-recommends cuda-cudart-11-8=${NV_CUDA_CUDART_VERSION} ${NV_CUDA_COMPAT_PACKAGE} && rm -rf /var/lib/apt/lists/* # buildkit
RUN |1 TARGETARCH=amd64 /bin/sh -c echo "/usr/local/nvidia/lib" >> /etc/ld.so.conf.d/nvidia.conf && echo "/usr/local/nvidia/lib64" >> /etc/ld.so.conf.d/nvidia.conf # buildkit
ENV PATH=/usr/local/nvidia/bin:/usr/local/cuda/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
ENV LD_LIBRARY_PATH=/usr/local/nvidia/lib:/usr/local/nvidia/lib64
COPY NGC-DL-CONTAINER-LICENSE / # buildkit
ENV NVIDIA_VISIBLE_DEVICES=all
ENV NVIDIA_DRIVER_CAPABILITIES=compute,utility
ENV NV_CUDA_LIB_VERSION=11.8.0-1
ENV NV_NVTX_VERSION=11.8.86-1
ENV NV_LIBNPP_VERSION=11.8.0.86-1
ENV NV_LIBNPP_PACKAGE=libnpp-11-8=11.8.0.86-1
ENV NV_LIBCUSPARSE_VERSION=11.7.5.86-1
ENV NV_LIBCUBLAS_PACKAGE_NAME=libcublas-11-8
ENV NV_LIBCUBLAS_VERSION=11.11.3.6-1
ENV NV_LIBCUBLAS_PACKAGE=libcublas-11-8=11.11.3.6-1
ENV NV_LIBNCCL_PACKAGE_NAME=libnccl2
ENV NV_LIBNCCL_PACKAGE_VERSION=2.15.5-1
ENV NCCL_VERSION=2.15.5-1
ENV NV_LIBNCCL_PACKAGE=libnccl2=2.15.5-1+cuda11.8
ARG TARGETARCH
LABEL maintainer=NVIDIA CORPORATION <cudatools@nvidia.com>
RUN |1 TARGETARCH=amd64 /bin/sh -c apt-get update && apt-get install -y --no-install-recommends cuda-libraries-11-8=${NV_CUDA_LIB_VERSION} ${NV_LIBNPP_PACKAGE} cuda-nvtx-11-8=${NV_NVTX_VERSION} libcusparse-11-8=${NV_LIBCUSPARSE_VERSION} ${NV_LIBCUBLAS_PACKAGE} ${NV_LIBNCCL_PACKAGE} && rm -rf /var/lib/apt/lists/* # buildkit
RUN |1 TARGETARCH=amd64 /bin/sh -c apt-mark hold ${NV_LIBCUBLAS_PACKAGE_NAME} ${NV_LIBNCCL_PACKAGE_NAME} # buildkit
COPY entrypoint.d/ /opt/nvidia/entrypoint.d/ # buildkit
COPY nvidia_entrypoint.sh /opt/nvidia/ # buildkit
ENV NVIDIA_PRODUCT_NAME=CUDA
ENTRYPOINT ["/opt/nvidia/nvidia_entrypoint.sh"]
ENV NV_CUDA_LIB_VERSION=11.8.0-1
ENV NV_CUDA_CUDART_DEV_VERSION=11.8.89-1
ENV NV_NVML_DEV_VERSION=11.8.86-1
ENV NV_LIBCUSPARSE_DEV_VERSION=11.7.5.86-1
ENV NV_LIBNPP_DEV_VERSION=11.8.0.86-1
ENV NV_LIBNPP_DEV_PACKAGE=libnpp-dev-11-8=11.8.0.86-1
ENV NV_LIBCUBLAS_DEV_VERSION=11.11.3.6-1
ENV NV_LIBCUBLAS_DEV_PACKAGE_NAME=libcublas-dev-11-8
ENV NV_LIBCUBLAS_DEV_PACKAGE=libcublas-dev-11-8=11.11.3.6-1
ENV NV_CUDA_NSIGHT_COMPUTE_VERSION=11.8.0-1
ENV NV_CUDA_NSIGHT_COMPUTE_DEV_PACKAGE=cuda-nsight-compute-11-8=11.8.0-1
ENV NV_NVPROF_VERSION=11.8.87-1
ENV NV_NVPROF_DEV_PACKAGE=cuda-nvprof-11-8=11.8.87-1
ENV NV_LIBNCCL_DEV_PACKAGE_NAME=libnccl-dev
ENV NV_LIBNCCL_DEV_PACKAGE_VERSION=2.15.5-1
ENV NCCL_VERSION=2.15.5-1
ENV NV_LIBNCCL_DEV_PACKAGE=libnccl-dev=2.15.5-1+cuda11.8
ARG TARGETARCH
LABEL maintainer=NVIDIA CORPORATION <cudatools@nvidia.com>
RUN |1 TARGETARCH=amd64 /bin/sh -c apt-get update && apt-get install -y --no-install-recommends cuda-cudart-dev-11-8=${NV_CUDA_CUDART_DEV_VERSION} cuda-command-line-tools-11-8=${NV_CUDA_LIB_VERSION} cuda-minimal-build-11-8=${NV_CUDA_LIB_VERSION} cuda-libraries-dev-11-8=${NV_CUDA_LIB_VERSION} cuda-nvml-dev-11-8=${NV_NVML_DEV_VERSION} ${NV_NVPROF_DEV_PACKAGE} ${NV_LIBNPP_DEV_PACKAGE} libcusparse-dev-11-8=${NV_LIBCUSPARSE_DEV_VERSION} ${NV_LIBCUBLAS_DEV_PACKAGE} ${NV_LIBNCCL_DEV_PACKAGE} ${NV_CUDA_NSIGHT_COMPUTE_DEV_PACKAGE} && rm -rf /var/lib/apt/lists/* # buildkit
RUN |1 TARGETARCH=amd64 /bin/sh -c apt-mark hold ${NV_LIBCUBLAS_DEV_PACKAGE_NAME} ${NV_LIBNCCL_DEV_PACKAGE_NAME} # buildkit
ENV LIBRARY_PATH=/usr/local/cuda/lib64/stubs
STOPSIGNAL SIGRTMIN+3
ENV DEBIAN_FRONTEND=noninteractive
ENV container=docker
ARG MUNGEUSER=983
ARG MUNGEGROUP=983
ARG SLURMUSER=120
ARG SLURMGROUP=120
|4 MUNGEGROUP=983 MUNGEUSER=983 SLURMGROUP=120 SLURMUSER=120 /bin/sh -c groupadd -f -g $SLURMGROUP slurm && useradd -m -c "SLURM workload manager" -d /var/lib/slurm -u $SLURMUSER -g slurm -s /bin/bash slurm
|4 MUNGEGROUP=983 MUNGEUSER=983 SLURMGROUP=120 SLURMUSER=120 /bin/sh -c apt-get update && apt-get install -y --no-install-recommends zip unzip python2 python3 python3-dev python3-setuptools python3-pip libtiff5 netbase ed curl iputils-ping sudo net-tools openssh-server jq slurmd nodejs systemd sssd sssd-kcm krb5-user && rm -rf /var/lib/apt/lists/*
|4 MUNGEGROUP=983 MUNGEUSER=983 SLURMGROUP=120 SLURMUSER=120 /bin/sh -c groupmod -o -g $MUNGEGROUP munge && usermod -c "MUNGE Uid 'N' Gid Emporium" -d /var/lib/munge -u $MUNGEUSER -g munge -s /sbin/nologin munge && mkdir -p /var/log/munge && chown -R munge:$MUNGEGROUP /etc/munge /var/log/munge
ENV CRYOSPARC_ROOT_DIR=/app
|4 MUNGEGROUP=983 MUNGEUSER=983 SLURMGROUP=120 SLURMUSER=120 /bin/sh -c mkdir -p ${CRYOSPARC_ROOT_DIR}
WORKDIR /app
ARG CRYOSPARC_VERSION=4.2.1
ENV CRYOSPARC_VERSION=4.2.1
ENV CRYOSPARC_MASTER_DIR=/app/cryosparc_master
COPY dir:cae635f0c02f06373e4fe45953201cffc369c6c7adfcf6de8a01000209e84977 in /app/cryosparc_master
|4 MUNGEGROUP=983 MUNGEUSER=983 SLURMGROUP=120 SLURMUSER=120 /bin/sh -c cd ${CRYOSPARC_MASTER_DIR} && bash ./install.sh --license b9f868da-d09a-11e8-a402-83ec7580ac8e --hostname cryosparc-0.cryosparc-svc.cryosparc.svc.morgana --yes --allowroot --port 45000 && mkdir run
COPY --chown=root:rootfile:d317617a3104306a32b08495082babcb8c704ef592426d6bc6606f1f7614125b in /usr/lib/systemd/system/
COPY --chown=root:rootfile:2a8755af6d75e4d230e05c4eeb9d1ce313452532076d8444f01aec43de820850 in /usr/lib/systemd/system/
COPY --chown=120:120file:13c49394e5fea216bc7063d6375e54210590795d698b0e1dc1852d13243fd634 in /etc/default/slurmd
COPY --chown=root:rootfile:be91bb19fdd1c103d2c1325da33255ef83e54f43b23366d50271a469db26dac9 in /etc/ldap/ldap.conf
|4 MUNGEGROUP=983 MUNGEUSER=983 SLURMGROUP=120 SLURMUSER=120 /bin/sh -c mkdir /etc/systemd/system/slurmd.service.d/ && echo "[Unit]\nConditionPathExists=" > /etc/systemd/system/slurmd.service.d/overrides.conf
COPY --chown=munge:983file:e9382854f26713b5425f4ee10c2a601ff46dc2b6d218c2186f57261233f8b3e0 in /etc/munge/munge.key
|4 MUNGEGROUP=983 MUNGEUSER=983 SLURMGROUP=120 SLURMUSER=120 /bin/sh -c systemctl enable munge.service journal-out.service slurmd.service cryosparc_master.service
|4 MUNGEGROUP=983 MUNGEUSER=983 SLURMGROUP=120 SLURMUSER=120 /bin/sh -c systemctl set-default multi-user.target
CMD ["/usr/lib/systemd/systemd" "--system"]
EXPOSE 45000
EXPOSE 636

Labels

Key Value
maintainer NVIDIA CORPORATION <cudatools@nvidia.com>
org.opencontainers.image.ref.name ubuntu
org.opencontainers.image.version 22.04
Details
Container
2025-04-22 14:46:24 +02:00
0
OCI / Docker
linux/amd64
5.0 GiB
Versions (1) View all
latest 2025-04-22