1 Commits

Author SHA1 Message Date
glavic_a 1415a39ff0 some modifications to add lipid models 2021-10-11 14:22:07 +02:00
35 changed files with 4409 additions and 1665 deletions
-1
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@@ -8,7 +8,6 @@ old
*.backup
.project
.settings
.idea
*.pyc
*.pyo
hosts
-9
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@@ -1,9 +0,0 @@
#!/bin/bash
# compress McStas hdf5 files to increase performance and save disk space
for fi in $*
do
echo $fi
h5repack -i $fi -o $fi.c -f /entry1/data/detector_list_p_x_y_t_L_sx_sy_sz/events:GZIP=5 -l /entry1/data/detector_list_p_x_y_t_L_sx_sy_sz/events:CHUNK=3072x8
mv $fi.c $fi
done
+1 -1
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@@ -8,7 +8,7 @@ import sys, os
from numpy import *
seterr(all='ignore')
import estia_help as eh
from aglib import mcstas_reader as mr
import mcstas_reader as mr
# Scaling factor of source monitor after normalizing by area to get to brilliance.
+422
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@@ -0,0 +1,422 @@
#-*- coding: utf-8 -*-
'''
Simple support library for reading, analyzing and plotting of McStas results
from the Estia instrument simulations.
Meant to be used from IPython Notebook or QtConsole, but can also be run stand alone.
'''
import os, sys
from numpy import *
try:
import h5py
except ImportError:
print "h5py not found, modern NeXuS format will not be readable."
try:
from IPython import display #@UnusedImport
from IPython.core.pylabtools import print_figure
from matplotlib.figure import Figure
from matplotlib.backends.backend_agg import FigureCanvasAgg
from matplotlib.colors import LogNorm
except ImportError:
# IPython and/or matplotlib not available, no interactive functionalities
display=None
MAX_EVTS_BATCH=50000
class McSim(object):
'''
Object representing complete simulation from McStas.
Supports either the old style McStas output with separate ASCII files
or HDF5 single file output.
Different monitors can be accessed as keys like in a dictionary. The data is only loaded when the monitor is first accessed.
'''
def __init__(self, path):
'''
Initialize the simulation. path should be the file name to either the NeXuS or the mccode.sim file.
'''
self._data={}
if path.endswith('.h5'):
self._init_hdf(path)
elif path.endswith('.sim'):
self._init_old(path)
else:
if os.path.exists(os.path.join(path,'mccode.h5')):
self._init_hdf(os.path.join(path,'mccode.h5'))
elif os.path.exists(os.path.join(path, 'mccode.sim')):
self._init_old(os.path.join(path, 'mccode.sim'))
else:
raise IOError, "Can't locate mccode.h5 of mccode.sim file in %s"%path
def _init_hdf(self, path):
self.hdf=h5py.File(path, 'r')
self.data_loader=DataLoaderHDF(self.hdf)
self.info=self.data_loader.info
def _init_old(self, path):
self.info=HeaderFile(path)
self.data_loader=DataLoaderOld(self.info, os.path.dirname(path))
def keys(self):
return self.info['data'].keys()
def monitors(self):
output=[]
for val in self.info['data'].values():
xy=(val['xvar'], val['yvar'])
if not xy in output:
output.append(xy)
output.sort()
return output
def plot(self, monitors=None):
graphs={}
for key, val in self.info['data'].items():
xy=(val['xvar'], val['yvar'])
if monitors is not None and xy!=monitors:
continue
data=self[key]
if xy in graphs:
graphs[xy].append(data)
else:
graphs[xy]=[data]
for xy, datasets in sorted(graphs.items()):
cols=min(len(datasets), 3)
rows=len(datasets)/3+1
fig=Figure(figsize=(12, 5*rows), dpi=300, facecolor='#FFFFFF')
FigureCanvasAgg(fig)
for i, data in enumerate(datasets):
ax=fig.add_subplot(rows, cols, i+1)
data.plot(ax=ax)
graphs[xy]=fig
if monitors is None:
return graphs
else:
return fig
def __getitem__(self, item):
if item in self._data:
return self._data[item]
elif item in self.keys():
data=self.data_loader.load_item(item)
self._data[item]=data
return data
else:
raise KeyError, "Can't find dataset %s"%item
class HeaderFile(object):
'''
Analyze McStas mccode.sim header files.
'''
_data=None
@property
def data(self):
return self._data['data']
def __init__(self, path):
self._data={}
data=open(path, 'r').read()
data_lines=data.splitlines()
if not data.startswith('McStas simulation description file'):
raise IOError, 'Not a valid McStas description file.'
self._data['start_time']=data_lines[1].split(':', 1)[1].strip()
self._data['program_name']=data_lines[2].split(':', 1)[1].strip()
self._data['data']=self.get_data(data)
def get_data(self, data):
output={}
start_idx=0
while start_idx<len(data):
start_idx=data.find('begin data', start_idx)
if start_idx==-1:
break
end_idx=data.find('end data', start_idx)
block=data[start_idx:end_idx].splitlines()[1:]
block_info={}
for bline in block:
item, value=bline.strip().split(':', 1)
block_info[item]=value.strip()
if item=='component':
output[value.strip()]=block_info
start_idx=end_idx
return output
def __getitem__(self, item):
return self._data[item]
class DataLoaderOld(object):
'''
Load and analyze a old style McStas format with a simulation and a set of data text files.
'''
def __init__(self, info, root):
self.info=info
self.root=root
def load_item(self, item):
item_info=self.info['data'][item]
if not item_info['type'].startswith('array_2d'):
return self.load_item_1d(item)
fname=os.path.join(self.root, item_info['filename'])
x_col=item_info['xvar']
y_col=item_info['yvar']
if x_col=='Li' and y_col=='p': # Detector_nD
cols=item_info['variables'].split()
data=loadtxt(fname, dtype={'names': cols, 'formats': ['f4']*len(cols)})
return TofData(data, item_info)
else:
raw=loadtxt(fname)
data=raw[:len(raw)/3]
return Dataset(data, item_info)
def load_item_1d(self, item):
item_info=self.info['data'][item]
fname=os.path.join(self.root, item_info['filename'])
raw=loadtxt(fname).T
data=raw[1]
errors=raw[2]
return Dataset1D(data, errors, item_info)
class DataLoaderHDF(object):
'''
Load and analyze a new style NeXuS file format.
'''
def __init__(self, hdf):
self.hdf=hdf['entry1']
self.info={}
self.info['data']={}
for item in self.hdf['data'].keys():
node=self.hdf['data/'+item]
info={}
for key, value in node.attrs.items():
info[key.strip()]=value.strip()
if info['filename'][-4:]=='.dat' or '_list.' in info['filename']:
self.info['data'][info['component']]=info
else:
self.info['data'][info['filename']]=info
info['datapath']='data/'+item
def load_item(self, item):
item_info=self.info['data'][item]
if not item_info['type'].startswith('array_2d'):
return self.load_item_1d(item)
node=self.hdf[item_info['datapath']]
x_col=item_info['xvar']
y_col=item_info['yvar']
if x_col=='Li' and y_col=='p': # Detector_nD
cols=item_info['variables'].split()
evds=node['events']
if len(evds)<=MAX_EVTS_BATCH:
data=evds.value.astype(float32).view(
dtype={'names': cols, 'formats': ['f4']*len(cols)}).flatten()
else:
ds=[]
sys.stdout.write('Reading large dataset:\n')
for i in range(len(evds)//MAX_EVTS_BATCH+1):
sys.stdout.write('\r%i/%i'%(i*MAX_EVTS_BATCH, len(evds)))
sys.stdout.flush()
ds.append(evds[i*MAX_EVTS_BATCH:(i+1)*MAX_EVTS_BATCH])
sys.stdout.write('\r%i/%i\n'%(len(evds), len(evds)))
data=vstack(ds).astype(float32).view(
dtype={'names': cols, 'formats': ['f4']*len(cols)}).flatten()
return TofData(data, item_info)
else:
data=node['data'].value.T
return Dataset(data, item_info)
def load_item_1d(self, item):
item_info=self.info['data'][item]
node=self.hdf[item_info['datapath']]
data=node['data'].value
errors=node['errors'].value
return Dataset1D(data, errors, item_info)
class Dataset1D(object):
'''
Representation of a standard McStas dataset of one variable.
'''
def __init__(self, data, errors, info):
self.data=data
self.errors=errors
self.info=info
def plot(self, log=False, ax=None):
if ax is None:
import pylab
ax=pylab.gca()
limits=map(float, self.info['xlimits'].split())
x=linspace(limits[0], limits[1], len(self.data))
ax.errorbar(x, self.data, yerr=self.errors)
if log:
ax.set_yscale('log')
else:
ax.set_yscale('linear')
ax.set_xlabel(self.info['xlabel'])
ax.set_ylabel(self.info['ylabel'])
ax.set_title(self.info['component'])
def _repr_png_(self):
'''
Image representation form ipython console/notebook.
'''
fig=Figure(figsize=(8, 5), dpi=300, facecolor='#FFFFFF')
FigureCanvasAgg(fig)
ax=fig.add_subplot(111)
self.plot(ax=ax)
return print_figure(fig, dpi=72)
class Dataset(object):
'''
Representation of a standard McStas dataset with 2D view.
'''
def __init__(self, data, info):
self.data=data
self.info=info
def plot(self, log=False, ax=None):
if ax is None:
import pylab
ax=pylab.gca()
limits=map(float, self.info['xylimits'].split())
if log:
ax.imshow(self.data, origin='lower', extent=limits, aspect='auto', norm=LogNorm())
else:
ax.imshow(self.data, origin='lower', extent=limits, aspect='auto')
ax.set_xlabel(self.info['xlabel'])
ax.set_ylabel(self.info['ylabel'])
ax.set_title(self.info['component'])
def _repr_png_(self):
'''
Image representation form ipython console/notebook.
'''
fig=Figure(figsize=(8, 5), dpi=300, facecolor='#FFFFFF')
FigureCanvasAgg(fig)
ax=fig.add_subplot(111)
self.plot(ax=ax)
return print_figure(fig, dpi=72)
class TofData(Dataset):
'''
Representation of a dataset collected with Monitor_nD
'''
def project1d(self, col, bins=50, fltr=None, newcols=None, norm=None):
'''
Generate binned data for arbitrary binning and columns.
The fltr argument can be a string with a filtering condition on the available columns.
Syntax for this filtering follows numpy array convetions like (x>5)&(abs(L)<0.3) would
be a valid statement.
newcols can be a list of (name, code) tuples, that calculate new columns from
existing ones, like newcols=[('q', '4*pi/L*sin(theta)')].
'''
columns=dict([(coli, self.data[coli]) for coli in self.data.dtype.names])
if newcols is not None:
for name, code in newcols:
columns[name]=eval(code, globals(), columns)
if norm is None:
w=self.data['p']
else:
w=eval(norm+'*p', globals(), columns)
if fltr is None:
I, x=histogram(columns[col], bins=bins, weights=w)
else:
if isinstance(fltr, basestring):
fltr=eval(fltr, globals(), columns)
I, x=histogram(columns[col][fltr], bins=bins, weights=w[fltr])
return x, I
def project2d(self, xcol, ycol, bins=50, fltr=None, newcols=None):
'''
Generate 2D binned data for arbitrary binning and columns.
The fltr argument can be a string with a filtering condition on the available columns.
Syntax for this filtering follows numpy array convetions like (x>5)&(abs(L)<0.3) would
be a valid statement.
newcols can be a list of (name, code) tuples, that calculate new columns from
existing ones, like newcols=[('q', '4*pi/L*sin(theta)')].
'''
columns=dict([(coli, self.data[coli]) for coli in self.data.dtype.names])
if newcols is not None:
for name, code in newcols:
columns[name]=eval(code, globals(), columns)
if fltr is None:
I, y, x=histogram2d(columns[ycol], columns[xcol],
bins=bins, weights=self.data['p'])
else:
if isinstance(fltr, basestring):
fltr=eval(fltr, globals(), columns)
I, y, x=histogram2d(columns[ycol][fltr], columns[xcol][fltr],
bins=bins, weights=columns['p'][fltr])
return x, y, I
def plot(self, xcol='x', ycol='y', log=False, ax=None, bins=50, fltr=None, newcols=None):
if ax is None:
import pylab
ax=pylab.gca()
x, y, I=self.project2d(xcol, ycol, bins=bins, fltr=fltr, newcols=newcols)
if log:
ax.pcolormesh(x, y, I, norm=LogNorm())
else:
ax.pcolormesh(x, y, I)
col_names=self.info['title'].split()
cols=self.info['variables'].split()
try:
ax.set_xlabel(xcol+'-'+col_names[cols.index(xcol)])
except ValueError:
ax.set_xlabel(xcol)
try:
ax.set_ylabel(ycol+'-'+col_names[cols.index(ycol)])
except ValueError:
ax.set_ylabel(ycol)
ax.set_title(self.info['component'])
def plot1d(self, col='x', log=False, ax=None, bins=50, fltr=None, newcols=None):
if ax is None:
import pylab
ax=pylab.gca()
x, I=self.project1d(col, bins=bins, fltr=fltr, newcols=newcols)
if log:
ax.semilogy((x[:-1]+x[1:])/2., I)
else:
ax.plot((x[:-1]+x[1:])/2., I)
col_names=self.info['title'].split()
cols=self.info['variables'].split()
try:
ax.set_xlabel(col+'-'+col_names[cols.index(col)])
except ValueError:
ax.set_xlabel(col)
ax.set_ylabel('Intensity')
ax.set_title(self.info['component'])
+42 -65
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@@ -53,8 +53,7 @@ DEFINE INSTRUMENT ESS_reflectometer_Estia
int operationmode = 0, double over_illumination = 0.0, double theta_resolution = 0.04,
double lambda_min = 3.75, double lambda_start = 3.0, double lambda_end = 12.0,
int enable_chopper = 0, int enable_gravity=0, int enable_windows=1,
int enable_polarizer = 0, int enable_analyzer = 0,
double pol1_start=0.3, double pol1_angle=1.66, double pol2_start=0.3, double pol2_angle=1.66,
int enable_polarizer = 0, int enable_analyzer = 0,
double source_power = 2,
double selene1_foot1y =0.0, double selene1_foot2y = 0.0
)
@@ -105,20 +104,12 @@ double velocity_max ; // m/s neutron velocity of lambda_min
double analyzer_max_height = 0.01; // Maximum sample height to be covered by te polarization analyzers
double analyzer_flipper_start = 0.4; // Distance from sample to analyzer flipper
double analyzer1_start = 0.65; // Distance to sample to start the first analyzer
double analyzer1_length = 1.3; // length of first analyzer
double analyzer2_start = 0.7; // Distance to sample to start the first analyzer
double analyzer2_length = 1.6; // length of first analyzer
double Theta1_analyzer1, Theta1_analyzer2, Theta2_analyzer1, Theta2_analyzer2, dist_ana_vfocus; // quantities calculated out of values above and 1.5 degree covered divergence
int p_int;
%}
USERVARS %{
int p_int; // a flag that gets incremented if a polarizer mirror scatters
%}
INITIALIZE
@@ -127,11 +118,11 @@ INITIALIZE
velocity_max= 3.956034E3 / lambda_min; // h/m_n over lambda - ((3.9..e-7m^2/s))/(1e-10m)
chopper_phase=360.0*(chopper_pos*chopper_freq/velocity_max+(pulse_zero-opening_time)*chopper_freq);
chopper_open = 98.0;
p_int=0;
/* print out some calculated parameter for checking purposes */
printf(" Chopper phase = %.1f deg\n", chopper_phase);
//printf(" Chopper open = %.1f deg\n", chopper_open);
printf(" Chopper open = %.1f deg\n", chopper_open);
dist_ana_vfocus=analyzer_max_height/2.0/tan(1.5*PI/360.0); // the virtual focus point infront of the actual sample focus where the beams furthest out meet
@@ -144,8 +135,8 @@ Theta2_analyzer2=atan((dist_ana_vfocus+analyzer2_start+analyzer2_length)/dist_an
selene1_center=(selene1_foot1+selene1_foot2)/2.;
selene1_shift=(selene1_foot1y+selene1_foot2y)/1000.0;
selene1_rot=atan((selene1_foot2y-selene1_foot1y)/(selene1_foot2-selene1_foot1)/1000.0)*180.0/PI;
//printf(" Selene 1 rotation = %.4f deg\n", selene1_rot);
//printf(" Selene 1 shift = %.1f mm\n", selene1_shift*1e3);
printf(" Selene 1 rotation = %.4f deg\n", selene1_rot);
printf(" Selene 1 shift = %.1f mm\n", selene1_shift*1e3);
%}
TRACE
@@ -211,7 +202,7 @@ COMPONENT moderator = ESS_butterfly(
sector = "E", beamline = 2, yheight = 0.03, cold_frac = 0.9,
focus_xw = E02_01_01_Cu_in_xmax-E02_01_01_Cu_in_xmin+0.002,
focus_yh = E02_01_01_Cu_in_yheight+0.002,
target_index=3, Lmin = lambda_start, Lmax = lambda_end,
target_index=4, Lmin = lambda_start, Lmax = lambda_end,
n_pulses = 1+enable_chopper, acc_power=source_power)
AT (0, 0, 0) RELATIVE origin
@@ -243,15 +234,6 @@ COMPONENT chopper = DiskChopper(radius=chopper_diameter/2.0, yheight=0.02,
AT (0, 0, chopper_pos-2*NBOA_c) RELATIVE arm_virtual_source_beam
COMPONENT vs_divergence_h = DivPos_monitor(nb=21, ndiv=41, filename="vs_hordiv",
xmin=-0.02, xmax=0.02, ymin=-0.02, ymax=0.02, maxdiv=2.0,
restore_neutron=1)
AT (0, 0, -0.5*sample_length-0.001) RELATIVE arm_selene1
COMPONENT vs_divergence_v = DivPos_monitor(nb=21, ndiv=41, filename="vs_verdiv",
xmin=-0.02, xmax=0.02, ymin=-0.02, ymax=0.02, maxdiv=2.0,
restore_neutron=1, vertical=1)
AT (0, 0, -0.5*sample_length-0.001) RELATIVE arm_selene1
/* The actual virtual source mask, two L-shaped absorbers (first top-right) */
COMPONENT virtual_source_TR = Slit(
@@ -300,8 +282,8 @@ COMPONENT ac_slit = Slit(
* Sample area *
***************/
COMPONENT tof_sample = Monitor_nD(
filename = "tof_sample", user1=p_int,
options = "x limits=[-0.025 0.025] bins=1000 y limits=[-0.025 0.025] bins=1000 xdiv limits=[-0.75 0.75] bins=150 ydiv limits=[-2.0 2.0] bins=400 time limits=[0 0.6] bins=6000 lambda limits=[0 35] bins=3500 sy limits=[-1 1] bins=2000 user1 list all",
filename = "tof_sample",
options = "x limits=[-0.025 0.025] bins=1000 y limits=[-0.025 0.025] bins=1000 xdiv limits=[-0.75 0.75] bins=150 ydiv limits=[-2.0 2.0] bins=400 time limits=[0 0.6] bins=6000 lambda limits=[0 35] bins=3500 list all",
xwidth=0.05, yheight = 0.05)
WHEN sample==4
AT (0, 0, 0) RELATIVE arm_sample_beam
@@ -348,68 +330,63 @@ COMPONENT si_sample = Mirror(
AT (0, 0, 0) RELATIVE arm_sample
ROTATED (0, 90, 0) RELATIVE arm_sample
/* Rotate spin 90 degrees*/
COMPONENT arm_hack = Arm()
AT (0, 0, 0) RELATIVE arm_sample
EXTEND %{
double tmp = sy;
sy = sx;
sx = -tmp;
%}
/* flipped arm detector to position analyzer correctly for beam path 1*/
COMPONENT arm_detector2 = Arm()
AT (0, 0, 0) RELATIVE arm_detector
ROTATED (0,0,180) RELATIVE arm_detector
/* Asymmetric lipid bilayer */
COMPONENT lipid_h20_sample = Mirror(
xwidth = sample_length, yheight = sample_height,
center = 1, transmit = 0,
reflect = "lipid_h2o.ref"
)
WHEN sample==4
AT (0, 0, 0) RELATIVE arm_sample
ROTATED (0, 90, 0) RELATIVE arm_sample
COMPONENT lipid_d20_sample = Mirror(
xwidth = sample_length, yheight = sample_height,
center = 1, transmit = 0,
reflect = "lipid_d2o.ref"
)
WHEN sample==5
AT (0, 0, 0) RELATIVE arm_sample
ROTATED (0, 90, 0) RELATIVE arm_sample
COMPONENT lipid_smw_sample = Mirror(
xwidth = sample_length, yheight = sample_height,
center = 1, transmit = 0,
reflect = "lipid_smw.ref"
)
WHEN sample==6
AT (0, 0, 0) RELATIVE arm_sample
ROTATED (0, 90, 0) RELATIVE arm_sample
COMPONENT arm_analyzer = Arm()
AT (0, 0, 0) RELATIVE arm_detector2
ROTATED (-selene_theta+(Theta1_analyzer1-Theta2_analyzer1)/2.0, 0, 0) RELATIVE arm_detector2
COMPONENT virtual_analyzer_flipper = Arm() // Gone -> Pol_SF_ideal(ny=1, xwidth=1, yheight=1, zdepth=0.001)
WHEN (enable_analyzer>2)
AT (0, 0, analyzer_flipper_start) RELATIVE arm_analyzer
ROTATED (0,0,0.0) RELATIVE arm_analyzer
EXTEND %{
if(INSTRUMENT_GETPAR(enable_analyzer)>2) sx *=-1;
%}
AT (0, 0, 0) RELATIVE arm_detector
ROTATED (-selene_theta+(Theta1_analyzer1-Theta2_analyzer1)/2.0, 0, 0) RELATIVE arm_detector
COMPONENT arm_analyzer2 = Arm()
AT (0, 0, 0) RELATIVE arm_detector2
ROTATED (-selene_theta+(Theta1_analyzer2-Theta2_analyzer2)/2.0, 0, 0) RELATIVE arm_detector2
AT (0, 0, 0) RELATIVE arm_detector
ROTATED (-selene_theta+(Theta1_analyzer2-Theta2_analyzer2)/2.0, 0, 0) RELATIVE arm_detector
/* polarization analyser */
COMPONENT analyzer1 = Polariser(enable_ref=1, d_substrate = 5e-4, reflect_d=0, reflect_u=0, lin=analyzer1_start, length=analyzer1_length,
COMPONENT analyzer1 = Polariser(nIncRefr=1, d_substrate = 5e-4, reflect_d=0, reflect_u=0, lin=analyzer1_start, length=analyzer1_length,
delta_theta=(Theta1_analyzer1+Theta2_analyzer1+0.05)*PI/180.0, h2=0.14, h1=0.05, abs_ref=0,
m_u=5.5, m_d=0.45, both_coated=0, alpha=2.3, W = 0.0014)
WHEN enable_analyzer
AT (0, 0.0, analyzer1_start) RELATIVE arm_analyzer
ROTATED (0,0,0.0) RELATIVE arm_analyzer
COMPONENT analyzer2 = Polariser(enable_ref=1, d_substrate = 5e-4, reflect_d=0, reflect_u=0, lin=analyzer2_start, length=analyzer2_length,
COMPONENT analyzer2 = Polariser(nIncRefr=1, d_substrate = 5e-4, reflect_d=0, reflect_u=0, lin=analyzer2_start, length=analyzer2_length,
delta_theta=(Theta1_analyzer2+Theta2_analyzer2+0.05)*PI/180.0, h2=0.2, h1=0.05, abs_out=0,
m_u=5.0, m_d=0.65, both_coated=1, alpha=2.3, W = 0.0014)
WHEN enable_analyzer==2
AT (0, 0.0, analyzer2_start) RELATIVE arm_analyzer2
ROTATED (0,0,0.0) RELATIVE arm_analyzer2
AT (0, 0.0, analyzer2_start) RELATIVE arm_analyzer
ROTATED (0,0,0.0) RELATIVE arm_analyzer
/* detector */
COMPONENT tof_detector = Monitor_nD(
filename = "tof_detector",
options = "x limits=[-0.25 0.25] bins=1000 y limits=[-0.5 0.5] bins=1000 time limits=[0 0.6] bins=6000 lambda limits=[0 35] bins=3500 sx sy sz user1, list all",
options = "x limits=[-0.25 0.25] bins=1000 y limits=[-0.5 0.5] bins=1000 time limits=[0 0.6] bins=6000 lambda limits=[0 35] bins=3500 sx limits=[-1 1] bins=1000 sy limits=[-1 1] bins=1000, list all",
xwidth = 0.5, yheight = 1.0)
WHEN sample!=4
AT (0, 0, detector_arm+0.00001) RELATIVE arm_detector
ROTATED (0, 0, 0) RELATIVE arm_detector
/***********************************************************************/
+17 -17
View File
@@ -144,7 +144,7 @@ COMPONENT NBOA_window=Al_window(thickness=NBOA_Al_entrance_length)
AT (0,0,NBOA_Al_entrance_start) RELATIVE ISCS
COMPONENT NBOA_side = Absorber(xmin=NBOA_side_x, xmax=NBOA_side_x+0.012,
COMPONENT NBOA_side = AbsorberFixed(xmin=NBOA_side_x, xmax=NBOA_side_x+0.012,
ymin=-0.2, ymax=0.2,
zmin=0.0, zmax=E02_01_01_Cu_length+E02_01_01_length+E02_01_02_length+E02_01_03_length)
AT (0, 0, E02_01_01_Cu_start) RELATIVE ISCS
@@ -181,7 +181,7 @@ COMPONENT NBOA_Cu_collimator=Guide_gravity(
* feeder neutron guide *
************************/
COMPONENT E02_01_011_wedge = Absorber(xmin=-0.1, xmax=0.0,
COMPONENT E02_01_011_wedge = AbsorberFixed(xmin=-0.1, xmax=0.0,
ymin=-E02_01_011_wh/2.0, ymax=E02_01_011_wh/2.0,
zmin=0.0, zmax=E02_01_01_length-0.5)
AT (0, 0, E02_01_01_start) RELATIVE ISCS
@@ -190,7 +190,7 @@ COMPONENT E02_01_011_wedge = Absorber(xmin=-0.1, xmax=0.0,
ALLOW_BACKPROP;
PROP_Z0;
%}
COMPONENT E02_01_012_wedge = Absorber(xmin=-0.1, xmax=0.0,
COMPONENT E02_01_012_wedge = AbsorberFixed(xmin=-0.1, xmax=0.0,
ymin=-E02_01_012_wh/2.0, ymax=E02_01_012_wh/2.0,
zmin=0.5-E02_01_01_Cu_length, zmax=E02_01_01_length)
AT (0, 0, E02_01_01_start) RELATIVE ISCS
@@ -210,7 +210,7 @@ COMPONENT E02_01_01 = Elliptic_guide_gravity(
enableGravity=enable_gravity)
AT (0, 0, E02_01_01_start) RELATIVE ISCS
COMPONENT E02_01_021_wedge = Absorber(xmin=-0.1, xmax=0.0,
COMPONENT E02_01_021_wedge = AbsorberFixed(xmin=-0.1, xmax=0.0,
ymin=-E02_01_021_wh/2.0, ymax=E02_01_021_wh/2.0,
zmin=0.0, zmax=E02_01_02_length/2.0)
AT (0, 0, E02_01_02_start) RELATIVE ISCS
@@ -219,7 +219,7 @@ COMPONENT E02_01_021_wedge = Absorber(xmin=-0.1, xmax=0.0,
ALLOW_BACKPROP;
PROP_Z0;
%}
COMPONENT E02_01_022_wedge = Absorber(xmin=-0.1, xmax=0.0,
COMPONENT E02_01_022_wedge = AbsorberFixed(xmin=-0.1, xmax=0.0,
ymin=-E02_01_022_wh/2.0, ymax=E02_01_022_wh/2.0,
zmin=E02_01_02_length/2.0, zmax=E02_01_02_length)
AT (0, 0, E02_01_02_start) RELATIVE ISCS
@@ -238,7 +238,7 @@ COMPONENT E02_01_02 = Elliptic_guide_gravity(
enableGravity=enable_gravity)
AT (0, 0, E02_01_02_start) RELATIVE ISCS
COMPONENT E02_01_031_wedge = Absorber(xmin=-0.1, xmax=0.0,
COMPONENT E02_01_031_wedge = AbsorberFixed(xmin=-0.1, xmax=0.0,
ymin=-E02_01_031_wh/2.0, ymax=E02_01_031_wh/2.0,
zmin=0.0, zmax=0.5)
AT (0, 0, E02_01_03_start) RELATIVE ISCS
@@ -247,7 +247,7 @@ COMPONENT E02_01_031_wedge = Absorber(xmin=-0.1, xmax=0.0,
ALLOW_BACKPROP;
PROP_Z0;
%}
COMPONENT E02_01_032_wedge = Absorber(xmin=-0.1, xmax=0.0,
COMPONENT E02_01_032_wedge = AbsorberFixed(xmin=-0.1, xmax=0.0,
ymin=-E02_01_032_wh/2.0, ymax=E02_01_032_wh/2.0,
zmin=0.5, zmax=1.0)
AT (0, 0, E02_01_03_start) RELATIVE ISCS
@@ -256,7 +256,7 @@ COMPONENT E02_01_032_wedge = Absorber(xmin=-0.1, xmax=0.0,
ALLOW_BACKPROP;
PROP_Z0;
%}
COMPONENT E02_01_033_wedge = Absorber(xmin=-0.1, xmax=0.0,
COMPONENT E02_01_033_wedge = AbsorberFixed(xmin=-0.1, xmax=0.0,
ymin=-E02_01_033_wh/2.0, ymax=E02_01_033_wh/2.0,
zmin=1.0, zmax=E02_01_03_length)
AT (0, 0, E02_01_03_start) RELATIVE ISCS
@@ -299,7 +299,7 @@ COMPONENT NFGA_Al_window_in=Al_window(
WHEN enable_windows
AT (0,0,NFGA_Al_start) RELATIVE ISCS
COMPONENT NFGA_side1 = Absorber(xmin=NFGA_side_x1, xmax=NFGA_side_x1+0.008,
COMPONENT NFGA_side1 = AbsorberFixed(xmin=NFGA_side_x1, xmax=NFGA_side_x1+0.008,
ymin=-0.2, ymax=0.2,
zmin=0.002, zmax=0.502)
AT (0, 0, E02_02_01_start-0.002) RELATIVE ISCS
@@ -309,7 +309,7 @@ COMPONENT NFGA_side1 = Absorber(xmin=NFGA_side_x1, xmax=NFGA_side_x1+0.008,
ALLOW_BACKPROP;
PROP_Z0;
%}
COMPONENT NFGA_side2 = Absorber(xmin=NFGA_side_x2, xmax=NFGA_side_x2+0.008,
COMPONENT NFGA_side2 = AbsorberFixed(xmin=NFGA_side_x2, xmax=NFGA_side_x2+0.008,
ymin=-0.2, ymax=0.2,
zmin=0.502, zmax=E02_02_01_length+E02_02_02_length+E02_02_03_length+0.002)
AT (0, 0, E02_02_01_start-0.002) RELATIVE ISCS
@@ -321,7 +321,7 @@ COMPONENT NFGA_side2 = Absorber(xmin=NFGA_side_x2, xmax=NFGA_side_x2+0.008,
%}
// in-bunker feeder segments
COMPONENT E02_02_011_wedge = Absorber(xmin=-0.1, xmax=0.0,
COMPONENT E02_02_011_wedge = AbsorberFixed(xmin=-0.1, xmax=0.0,
ymin=-E02_02_011_wh/2.0, ymax=E02_02_011_wh/2.0,
zmin=0.0, zmax=E02_02_01_length/2.0)
AT (0, 0, E02_02_01_start) RELATIVE ISCS
@@ -330,7 +330,7 @@ COMPONENT E02_02_011_wedge = Absorber(xmin=-0.1, xmax=0.0,
ALLOW_BACKPROP;
PROP_Z0;
%}
COMPONENT E02_02_012_wedge = Absorber(xmin=-0.1, xmax=0.0,
COMPONENT E02_02_012_wedge = AbsorberFixed(xmin=-0.1, xmax=0.0,
ymin=-E02_02_012_wh/2.0, ymax=E02_02_012_wh/2.0,
zmin=E02_02_01_length/2.0, zmax=E02_02_01_length)
AT (0, 0, E02_02_01_start) RELATIVE ISCS
@@ -349,7 +349,7 @@ COMPONENT E02_02_01 = Elliptic_guide_gravity(
enableGravity=enable_gravity)
AT (0, 0, E02_02_01_start) RELATIVE ISCS
COMPONENT E02_02_021_wedge = Absorber(xmin=-0.1, xmax=0.0,
COMPONENT E02_02_021_wedge = AbsorberFixed(xmin=-0.1, xmax=0.0,
ymin=-E02_02_021_wh/2.0, ymax=E02_02_021_wh/2.0,
zmin=0.0, zmax=E02_02_02_length/2.0)
AT (0, 0, E02_02_02_start) RELATIVE ISCS
@@ -358,7 +358,7 @@ COMPONENT E02_02_021_wedge = Absorber(xmin=-0.1, xmax=0.0,
ALLOW_BACKPROP;
PROP_Z0;
%}
COMPONENT E02_02_022_wedge = Absorber(xmin=-0.1, xmax=0.0,
COMPONENT E02_02_022_wedge = AbsorberFixed(xmin=-0.1, xmax=0.0,
ymin=-E02_02_022_wh/2.0, ymax=E02_02_022_wh/2.0,
zmin=E02_02_02_length/2.0, zmax=E02_02_02_length)
AT (0, 0, E02_02_02_start) RELATIVE ISCS
@@ -377,7 +377,7 @@ COMPONENT E02_02_02 = Elliptic_guide_gravity(
enableGravity=enable_gravity)
AT (0, 0, E02_02_02_start) RELATIVE ISCS
COMPONENT E02_02_031_wedge = Absorber(xmin=-0.1, xmax=0.0,
COMPONENT E02_02_031_wedge = AbsorberFixed(xmin=-0.1, xmax=0.0,
ymin=-E02_02_031_wh/2.0, ymax=E02_02_031_wh/2.0,
zmin=0.0, zmax=0.5)
AT (0, 0, E02_02_03_start) RELATIVE ISCS
@@ -386,7 +386,7 @@ COMPONENT E02_02_031_wedge = Absorber(xmin=-0.1, xmax=0.0,
ALLOW_BACKPROP;
PROP_Z0;
%}
COMPONENT E02_02_032_wedge = Absorber(xmin=-0.1, xmax=0.0,
COMPONENT E02_02_032_wedge = AbsorberFixed(xmin=-0.1, xmax=0.0,
ymin=-E02_02_032_wh/2.0, ymax=E02_02_032_wh/2.0,
zmin=0.5, zmax=1.0)
AT (0, 0, E02_02_03_start) RELATIVE ISCS
@@ -395,7 +395,7 @@ COMPONENT E02_02_032_wedge = Absorber(xmin=-0.1, xmax=0.0,
ALLOW_BACKPROP;
PROP_Z0;
%}
COMPONENT E02_02_033_wedge = Absorber(xmin=-0.1, xmax=0.0,
COMPONENT E02_02_033_wedge = AbsorberFixed(xmin=-0.1, xmax=0.0,
ymin=-E02_02_033_wh/2.0, ymax=E02_02_033_wh/2.0,
zmin=1.0, zmax=E02_02_03_length)
AT (0, 0, E02_02_03_start) RELATIVE ISCS
+21 -167
View File
@@ -28,80 +28,20 @@ DEFINE INSTRUMENT Estia_selene(int enable_gravity=0)
DECLARE
%{
// Polarizer parameters used for the detailed design
double pol1_xstart = 1.007; // [m] up-stream of focus point
double pol1_ystart = 0.0064; // [m] (relative to c-axis)
double pol1_xend = 0.365; // [m] up-stream of focus point
double pol1_yend = 0.013; // [m]
double pol1_gamma = 1.65; // [deg] optimal incident angle for beams passing through focus point
double pol1_m = 5.08;
double pol1_lin_xstart = 1.007; //[m]
double pol1_lin_ystart = 0.0064; //[m]
double pol1_lin_xend = 0.812; //[m]
double pol1_lin_yend = -0.0014; //[m]
double pol1_lin_m = 5.5;
double pol2_xstart = 1.286; // [m] up-stream of focus point
double pol2_ystart = 0.009; // [m] (relative to c-axis)
double pol2_xend = 0.500; // [m] up-stream of focus point
double pol2_yend = 0.0175; // [m]
double pol2_gamma = 1.70; // [deg] optimal incident angle for beams passing through focus point
double pol2_m = 5.08;
double pol2_lin_xstart = 1.286; //[m]
double pol2_lin_ystart = 0.009; //[m]
double pol2_lin_xend = 1.093; //[m]
double pol2_lin_yend = 0.0014; //[m]
double pol2_lin_m = 5.08;
double pol_hclose = 0.12; // [m] height of entrance
double pol_hfar = 0.12; // [m] height of exit
// parameters for polarizer component calculated from the above
double pol1_length, pol2_length, pol1_lin_length, pol2_lin_length;
double Theta_pol1, Theta_pol2, Theta_rot1, Theta_rot2;
double Theta1_pol1, Theta1_pol2, Theta2_pol1, Theta2_pol2;
double pol1_lin_rot, pol2_lin_rot;
double polarizer_max_width = 0.0015; // Maximum sample height to be covered by te polarization analyzers
double polarizer_start = 0.3; // Distance to sample to start the first analyzer
double polarizer_length = 0.6; // length of first analyzer
double Theta1_polarizer, Theta2_polarizer, dist_pol_vfocus; // quantities calculated out of values above and 1.5 degree covered divergence
%}
INITIALIZE
%{
dist_pol_vfocus=polarizer_max_width/2.0/tan(1.5*PI/360.0); // the virtual focus point infront of the actual sample focus where the beams furthest out meet
pol1_length = pol1_xstart-pol1_xend;
pol2_length = pol2_xstart-pol2_xend;
pol1_lin_length = pol1_lin_xstart-pol1_lin_xend;
pol2_lin_length = pol2_lin_xstart-pol2_lin_xend;
Theta1_pol1=atan2(pol1_ystart, pol1_xstart); // [rad] angle between c-axis and entrance point
Theta2_pol1=atan2(pol1_yend, pol1_xend); // [rad] angle between c-axis and exit point
Theta1_pol2=atan2(pol2_ystart, pol2_xstart); // [rad] angle between c-axis and entrance point
Theta2_pol2=atan2(pol2_yend, pol2_xend); // [rad] angle between c-axis and exit point
Theta_pol1=(Theta2_pol1-Theta1_pol1)*180.0/PI; // [deg] full covered divergence angle
Theta_pol2=(Theta2_pol2-Theta1_pol2)*180.0/PI; // [deg]
Theta_rot1=(Theta1_pol1+Theta2_pol1)/2.0*180.0/PI; // [deg] rotation of center of polarizer
Theta_rot2=(Theta1_pol2+Theta2_pol2)/2.0*180.0/PI; // [deg]
pol1_lin_rot=atan2(pol1_lin_ystart-pol1_lin_yend,
pol1_lin_xstart-pol1_lin_xend)*180.0/PI; // [deg] rotation angle of polarizer
pol2_lin_rot=atan2(pol2_lin_ystart-pol2_lin_yend,
pol2_lin_xstart-pol2_lin_xend)*180.0/PI; // [deg] rotation angle of polarizer
printf(" Polarizer 1 angle = %.2f deg\n", Theta_rot1);
printf(" Polarizer 1 divergence = %.2f deg\n", Theta_pol1);
printf(" Polarizer 1 distance = %.1f mm\n", pol1_xstart*1000.0);
printf(" Polarizer 1 length = %.1f mm\n", pol1_length*1000.0);
printf(" PolStraight 1 angle = %.2f deg\n", pol1_lin_rot);
printf(" Polarizer 2 angle = %.2f deg\n", Theta_rot1);
printf(" Polarizer 2 divergence = %.2f deg\n", Theta_pol2);
printf(" Polarizer 2 distance = %.1f mm\n", pol2_xstart*1000.0);
printf(" Polarizer 2 length = %.1f mm\n", pol2_length*1000.0);
printf(" PolStraight 2 angle = %.2f deg\n", pol2_lin_rot);
Theta1_polarizer=atan((dist_pol_vfocus+polarizer_start)/dist_pol_vfocus*polarizer_max_width/2.0/polarizer_start)*180.0/PI;
Theta2_polarizer=atan((dist_pol_vfocus+polarizer_start+polarizer_length)/dist_pol_vfocus*polarizer_max_width/2.0/(polarizer_start+polarizer_length))*180.0/PI;
%}
TRACE
@@ -127,112 +67,26 @@ REMOVABLE COMPONENT source = Moderator(radius = 0.001, focus_xw = selene_entry+0
/**************************************
* Middle focus between Selene guides *
**************************************/
COMPONENT arm_polref = Arm()
COMPONENT arm_polarizer = Arm()
AT (0, 0, 2*selene_c) RELATIVE arm_selene1
ROTATED (selene_theta, -selene_theta, 0) RELATIVE ISCS
COMPONENT arm_polarizer = Arm()
AT (0, 0, 2*selene_c) RELATIVE arm_selene1
ROTATED (0, 0, 0) RELATIVE arm_selene1
COMPONENT arm_pol1 = Arm()
AT (0, 0, 0) RELATIVE arm_polarizer
ROTATED (0, -Theta_rot1, 0) RELATIVE arm_polarizer
COMPONENT arm_pol2 = Arm()
AT (0, 0, 0) RELATIVE arm_polarizer
ROTATED (0, -Theta_rot2, 0) RELATIVE arm_polarizer
COMPONENT polarizer1 = Polariser(nIncRefr=1, d_substrate = 5e-4, reflect_d=0, reflect_u=0, lin=-(polarizer_start+polarizer_length), length=polarizer_length,
delta_theta=(Theta1_polarizer+Theta2_polarizer)*PI/180.0, h2=0.1, h1=0.05, abs_ref=1, m_u=4.0, m_d=0.65, both_coated=1, alpha=2.3, W = 0.0014)
WHEN enable_polarizer
AT (0, 0, -(polarizer_start+polarizer_length)) RELATIVE arm_polarizer
ROTATED (0,0,90.0) RELATIVE arm_polarizer
COMPONENT polarizer2_lin = Pol_mirror(zwidth = pol2_lin_length, yheight = pol_hfar, p_reflect=0,
rUpData="SNAG_m5p5_Tup.ref", rDownData="SNAG_m5p5_Tdown.ref")
WHEN (enable_polarizer>0)
AT ((pol2_lin_ystart+pol2_lin_yend)/2.0, 0, -(pol2_lin_xstart+pol2_lin_xend)/2.0) RELATIVE arm_polarizer
ROTATED (0,-pol2_lin_rot,0.0) RELATIVE arm_polarizer
GROUP polarizer2_set
EXTEND
%{
if (SCATTERED==2) {
p_int +=2;
}
%}
COMPONENT polarizer2 = Polariser(lin=-pol2_xstart, length=pol2_length,
enable_ref=1, abs_ref=1, abs_out=1, both_coated=1,
d_substrate = 5e-4, T_loss=4.0e3,
m_u=pol2_m, m_d=0.6, m_residual=0.55,
alpha=2.3, W = 0.0014, reflect_d=0, reflect_u=0,
delta_theta=Theta_pol2*PI/180.0,
h2=pol_hfar, h1=pol_hclose)
WHEN (enable_polarizer>0)
AT (0, 0, -pol2_xstart) RELATIVE arm_pol2
ROTATED (0,0,90.0) RELATIVE arm_pol2
GROUP polarizer2_set
EXTEND
%{
if (SCATTERED) {
ALLOW_BACKPROP;
PROP_Z0;
p_int +=1;
} else ABSORB;
%}
COMPONENT replacement_pol2_set = Slit(xwidth=0.2, yheight=0.2)
WHEN (enable_polarizer==0)
AT (0, 0, -0.2) RELATIVE arm_polarizer
GROUP polarizer2_set
COMPONENT polarizer1_lin = Pol_mirror(zwidth = pol1_lin_length, yheight = pol_hfar, p_reflect=0,
rUpData="SNAG_m5p5_Tup.ref", rDownData="SNAG_m5p5_Tdown.ref")
WHEN (enable_polarizer>0)
AT ((pol1_lin_ystart+pol1_lin_yend)/2.0, 0, -(pol1_lin_xstart+pol1_lin_xend)/2.0) RELATIVE arm_polarizer
ROTATED (0,-pol1_lin_rot,0.0) RELATIVE arm_polarizer
GROUP polarizer1_set
EXTEND
%{
if (SCATTERED==2) {
p_int +=8;
}
%}
COMPONENT polarizer1 = Polariser(lin=-pol1_xstart, length=pol1_length,
enable_ref=1, abs_ref=1, abs_out=1, both_coated=1,
d_substrate = 5e-4, T_loss=4.0e3,
m_u=pol1_m, m_d=0.6, m_residual=0.55,
alpha=2.3, W = 0.0014, reflect_d=0, reflect_u=0,
delta_theta=Theta_pol1*PI/180.0,
h2=pol_hfar, h1=pol_hclose)
WHEN (enable_polarizer>0)
AT (0, 0, -pol1_xstart) RELATIVE arm_pol1
ROTATED (0,0,90.0) RELATIVE arm_pol1
GROUP polarizer1_set
EXTEND
%{
if (SCATTERED) {
p_int +=4;
}
%}
COMPONENT replacement_pol1_set = Slit(xwidth=0.2, yheight=0.2)
WHEN (enable_polarizer==0)
AT (0, 0, -0.1) RELATIVE arm_polarizer
GROUP polarizer1_set
/* The proximal polariser comes next */
COMPONENT polarizer2 = Polariser(nIncRefr=1, d_substrate = 5e-4, reflect_d=0, reflect_u=0, lin=polarizer_start, length=polarizer_length,
delta_theta=(Theta1_polarizer+Theta2_polarizer)*PI/180.0, h2=0.1, h1=0.05, abs_ref=1, m_u=4.0, m_d=0.65, both_coated=1, alpha=2.3, W = 0.0014)
WHEN (enable_polarizer>1)
AT (0, 0, polarizer_start) RELATIVE arm_polarizer
ROTATED (0.0,0,90.0) RELATIVE arm_polarizer
COMPONENT mf_divergence_h = DivPos_monitor(nb=21, ndiv=41, filename="mf_hordiv",
xmin=-0.02, xmax=0.02, ymin=-0.02, ymax=0.02, maxdiv=2.0)
AT (0, 0, 0) RELATIVE arm_polarizer
COMPONENT mf_divergence_v = DivPos_monitor(nb=21, ndiv=41, filename="mf_verdiv",
xmin=-0.02, xmax=0.02, ymin=-0.02, ymax=0.02, maxdiv=2.0, vertical=1)
AT (0, 0, 0) RELATIVE arm_polarizer
COMPONENT virtual_flipper = Pol_SF_ideal(ny=1, xwidth=0.1, yheight=0.1, zdepth=0.001)
WHEN (enable_polarizer>2)
AT (0, 0, 0) RELATIVE arm_polarizer
FINALLY
+17 -17
View File
@@ -102,7 +102,7 @@ REMOVABLE COMPONENT source = Moderator(radius = 0.001, focus_xw = selene_entry+0
/* Absorber to cut direct view beam (Copper in CAD model) */
COMPONENT slit_before_selene_guide_1 = Slit(
xmin = 0, xmax = selene_entry+0.001,
ymin = -selene_entry-0.005, ymax = 0)
ymin = 0, ymax = selene_entry+0.005)
AT (0, 0, selene_distance-0.01) RELATIVE arm_selene1
COMPONENT block_before_selene_guide_1 = Absorber(
@@ -118,7 +118,7 @@ COMPONENT E02_03_01 = Elliptic_guide_gravity(
linyh = selene_distance, loutyh= selene_distance+14*selene_segment,
linxw = selene_distance, loutxw= selene_distance+14*selene_segment,
xwidth=selene_b*2, yheight=selene_b*2,
mright=0, mleft=scoating_01, mbottom=scoating_01, mtop=0,
mright=0, mleft=scoating_01, mtop=scoating_01, mbottom=0,
enableGravity=enable_gravity)
AT (0, 0, selene_distance) RELATIVE arm_selene1
@@ -127,7 +127,7 @@ COMPONENT E02_03_02 = Elliptic_guide_gravity(
linyh = selene_distance+1*selene_segment, loutyh= selene_distance+13*selene_segment,
linxw = selene_distance+1*selene_segment, loutxw= selene_distance+13*selene_segment,
xwidth=selene_b*2, yheight=selene_b*2,
mright=0, mleft=scoating_02, mbottom=scoating_02, mtop=0,
mright=0, mleft=scoating_02, mtop=scoating_02, mbottom=0,
enableGravity=enable_gravity)
AT (0, 0, selene_distance+1*selene_segment) RELATIVE arm_selene1
@@ -136,7 +136,7 @@ COMPONENT E02_03_03 = Elliptic_guide_gravity(
linyh = selene_distance+2*selene_segment, loutyh= selene_distance+12*selene_segment,
linxw = selene_distance+2*selene_segment, loutxw= selene_distance+12*selene_segment,
xwidth=selene_b*2, yheight=selene_b*2,
mright=0, mleft=scoating_03, mbottom=scoating_03, mtop=0,
mright=0, mleft=scoating_03, mtop=scoating_03, mbottom=0,
enableGravity=enable_gravity)
AT (0, 0, selene_distance+2*selene_segment) RELATIVE arm_selene1
@@ -145,7 +145,7 @@ COMPONENT E02_03_04 = Elliptic_guide_gravity(
linyh = selene_distance+3*selene_segment, loutyh= selene_distance+11*selene_segment,
linxw = selene_distance+3*selene_segment, loutxw= selene_distance+11*selene_segment,
xwidth=selene_b*2, yheight=selene_b*2,
mright=0, mleft=scoating_04, mbottom=scoating_04, mtop=0,
mright=0, mleft=scoating_04, mtop=scoating_04, mbottom=0,
enableGravity=enable_gravity)
AT (0, 0, selene_distance+3*selene_segment) RELATIVE arm_selene1
@@ -154,7 +154,7 @@ COMPONENT E02_03_05 = Elliptic_guide_gravity(
linyh = selene_distance+4*selene_segment, loutyh= selene_distance+10*selene_segment,
linxw = selene_distance+4*selene_segment, loutxw= selene_distance+10*selene_segment,
xwidth=selene_b*2, yheight=selene_b*2,
mright=0, mleft=scoating_05, mbottom=scoating_05, mtop=0,
mright=0, mleft=scoating_05, mtop=scoating_05, mbottom=0,
enableGravity=enable_gravity)
AT (0, 0, selene_distance+4*selene_segment) RELATIVE arm_selene1
@@ -163,7 +163,7 @@ COMPONENT E02_03_06 = Elliptic_guide_gravity(
linyh = selene_distance+5*selene_segment, loutyh= selene_distance+9*selene_segment,
linxw = selene_distance+5*selene_segment, loutxw= selene_distance+9*selene_segment,
xwidth=selene_b*2, yheight=selene_b*2,
mright=0, mleft=scoating_06, mbottom=scoating_06, mtop=0,
mright=0, mleft=scoating_06, mtop=scoating_06, mbottom=0,
enableGravity=enable_gravity)
AT (0, 0, selene_distance+5*selene_segment) RELATIVE arm_selene1
@@ -172,7 +172,7 @@ COMPONENT E02_03_07 = Elliptic_guide_gravity(
linyh = selene_distance+6*selene_segment, loutyh= selene_distance+8*selene_segment,
linxw = selene_distance+6*selene_segment, loutxw= selene_distance+8*selene_segment,
xwidth=selene_b*2, yheight=selene_b*2,
mright=0, mleft=scoating_07, mbottom=scoating_07, mtop=0,
mright=0, mleft=scoating_07, mtop=scoating_07, mbottom=0,
enableGravity=enable_gravity)
AT (0, 0, selene_distance+6*selene_segment) RELATIVE arm_selene1
@@ -181,7 +181,7 @@ COMPONENT E02_03_08 = Elliptic_guide_gravity(
linyh = selene_distance+7*selene_segment, loutyh= selene_distance+7*selene_segment,
linxw = selene_distance+7*selene_segment, loutxw= selene_distance+7*selene_segment,
xwidth=selene_b*2, yheight=selene_b*2,
mright=0, mleft=scoating_08, mbottom=scoating_08, mtop=0,
mright=0, mleft=scoating_08, mtop=scoating_08, mbottom=0,
enableGravity=enable_gravity)
AT (0, 0, selene_distance+7*selene_segment) RELATIVE arm_selene1
@@ -190,7 +190,7 @@ COMPONENT E02_03_09 = Elliptic_guide_gravity(
linyh = selene_distance+8*selene_segment, loutyh= selene_distance+6*selene_segment,
linxw = selene_distance+8*selene_segment, loutxw= selene_distance+6*selene_segment,
xwidth=selene_b*2, yheight=selene_b*2,
mright=0, mleft=scoating_09, mbottom=scoating_09, mtop=0,
mright=0, mleft=scoating_09, mtop=scoating_09, mbottom=0,
enableGravity=enable_gravity)
AT (0, 0, selene_distance+8*selene_segment) RELATIVE arm_selene1
@@ -199,7 +199,7 @@ COMPONENT E02_03_10 = Elliptic_guide_gravity(
linyh = selene_distance+9*selene_segment, loutyh= selene_distance+5*selene_segment,
linxw = selene_distance+9*selene_segment, loutxw= selene_distance+5*selene_segment,
xwidth=selene_b*2, yheight=selene_b*2,
mright=0, mleft=scoating_10, mbottom=scoating_10, mtop=0,
mright=0, mleft=scoating_10, mtop=scoating_10, mbottom=0,
enableGravity=enable_gravity)
AT (0, 0, selene_distance+9*selene_segment) RELATIVE arm_selene1
@@ -208,7 +208,7 @@ COMPONENT E02_03_11 = Elliptic_guide_gravity(
linyh = selene_distance+10*selene_segment, loutyh= selene_distance+4*selene_segment,
linxw = selene_distance+10*selene_segment, loutxw= selene_distance+4*selene_segment,
xwidth=selene_b*2, yheight=selene_b*2,
mright=0, mleft=scoating_11, mbottom=scoating_11, mtop=0,
mright=0, mleft=scoating_11, mtop=scoating_11, mbottom=0,
enableGravity=enable_gravity)
AT (0, 0, selene_distance+10*selene_segment) RELATIVE arm_selene1
@@ -217,7 +217,7 @@ COMPONENT E02_03_12 = Elliptic_guide_gravity(
linyh = selene_distance+11*selene_segment, loutyh= selene_distance+3*selene_segment,
linxw = selene_distance+11*selene_segment, loutxw= selene_distance+3*selene_segment,
xwidth=selene_b*2, yheight=selene_b*2,
mright=0, mleft=scoating_12, mbottom=scoating_12, mtop=0,
mright=0, mleft=scoating_12, mtop=scoating_12, mbottom=0,
enableGravity=enable_gravity)
AT (0, 0, selene_distance+11*selene_segment) RELATIVE arm_selene1
@@ -226,7 +226,7 @@ COMPONENT E02_03_13 = Elliptic_guide_gravity(
linyh = selene_distance+12*selene_segment, loutyh= selene_distance+2*selene_segment,
linxw = selene_distance+12*selene_segment, loutxw= selene_distance+2*selene_segment,
xwidth=selene_b*2, yheight=selene_b*2,
mright=0, mleft=scoating_13, mbottom=scoating_13, mtop=0,
mright=0, mleft=scoating_13, mtop=scoating_13, mbottom=0,
enableGravity=enable_gravity)
AT (0, 0, selene_distance+12*selene_segment) RELATIVE arm_selene1
@@ -235,7 +235,7 @@ COMPONENT E02_03_14 = Elliptic_guide_gravity(
linyh = selene_distance+13*selene_segment, loutyh= selene_distance+1*selene_segment,
linxw = selene_distance+13*selene_segment, loutxw= selene_distance+1*selene_segment,
xwidth=selene_b*2, yheight=selene_b*2,
mright=0, mleft=scoating_14, mbottom=scoating_14, mtop=0,
mright=0, mleft=scoating_14, mtop=scoating_14, mbottom=0,
enableGravity=enable_gravity)
AT (0, 0, selene_distance+13*selene_segment) RELATIVE arm_selene1
@@ -244,14 +244,14 @@ COMPONENT E02_03_15 = Elliptic_guide_gravity(
linyh = selene_distance+14*selene_segment, loutyh= selene_distance,
linxw = selene_distance+14*selene_segment, loutxw= selene_distance,
xwidth=selene_b*2, yheight=selene_b*2,
mright=0, mleft=scoating_15, mbottom=scoating_15, mtop=0,
mright=0, mleft=scoating_15, mtop=scoating_15, mbottom=0,
enableGravity=enable_gravity)
AT (0, 0, selene_distance+14*selene_segment) RELATIVE arm_selene1
/* Absorber to cut direct view beam (Copper in CAD model) */
COMPONENT slit_after_selene_guide_1 = Slit(
xmin = 0, xmax = selene_entry+0.005,
ymin = -selene_entry-0.005, ymax = 0)
ymin = 0, ymax = selene_entry+0.01)
AT (0, 0, 2*selene_c-selene_distance+0.001) RELATIVE arm_selene1
COMPONENT block_after_selene_guide_1 = Absorber(
+17 -17
View File
@@ -42,7 +42,7 @@ TRACE
/* Absorber to cut direct view beam (Bor-Al in CAD model) */
COMPONENT slit_before_selene_guide_2 = Slit(
xmin = -selene_entry-0.005, xmax=0,
ymin = 0, ymax = selene_entry+0.01)
ymin = -selene_entry-0.01, ymax = 0)
AT (0, 0, selene_distance-0.002) RELATIVE arm_selene2
COMPONENT block_before_selene_guide_2 = Absorber(
@@ -59,7 +59,7 @@ COMPONENT E02_04_01 = Elliptic_guide_gravity(
linyh = selene_distance, loutyh= selene_distance+14*selene_segment,
linxw = selene_distance, loutxw= selene_distance+14*selene_segment,
xwidth=selene_b*2, yheight=selene_b*2,
mright=scoating_15, mleft=0, mbottom=0, mtop=scoating_15,
mright=scoating_15, mleft=0, mtop=0, mbottom=scoating_15,
enableGravity=enable_gravity)
AT (0, 0, selene_distance) RELATIVE arm_selene2
@@ -68,7 +68,7 @@ COMPONENT E02_04_02 = Elliptic_guide_gravity(
linyh = selene_distance+1*selene_segment, loutyh= selene_distance+13*selene_segment,
linxw = selene_distance+1*selene_segment, loutxw= selene_distance+13*selene_segment,
xwidth=selene_b*2, yheight=selene_b*2,
mright=scoating_14, mleft=0, mbottom=0, mtop=scoating_14,
mright=scoating_14, mleft=0, mtop=0, mbottom=scoating_14,
enableGravity=enable_gravity)
AT (0, 0, selene_distance+1*selene_segment) RELATIVE arm_selene2
@@ -77,7 +77,7 @@ COMPONENT E02_04_03 = Elliptic_guide_gravity(
linyh = selene_distance+2*selene_segment, loutyh= selene_distance+12*selene_segment,
linxw = selene_distance+2*selene_segment, loutxw= selene_distance+12*selene_segment,
xwidth=selene_b*2, yheight=selene_b*2,
mright=scoating_13, mleft=0, mbottom=0, mtop=scoating_13,
mright=scoating_13, mleft=0, mtop=0, mbottom=scoating_13,
enableGravity=enable_gravity)
AT (0, 0, selene_distance+2*selene_segment) RELATIVE arm_selene2
@@ -86,7 +86,7 @@ COMPONENT E02_04_04 = Elliptic_guide_gravity(
linyh = selene_distance+3*selene_segment, loutyh= selene_distance+11*selene_segment,
linxw = selene_distance+3*selene_segment, loutxw= selene_distance+11*selene_segment,
xwidth=selene_b*2, yheight=selene_b*2,
mright=scoating_12, mleft=0, mbottom=0, mtop=scoating_12,
mright=scoating_12, mleft=0, mtop=0, mbottom=scoating_12,
enableGravity=enable_gravity)
AT (0, 0, selene_distance+3*selene_segment) RELATIVE arm_selene2
@@ -95,7 +95,7 @@ COMPONENT E02_04_05 = Elliptic_guide_gravity(
linyh = selene_distance+4*selene_segment, loutyh= selene_distance+10*selene_segment,
linxw = selene_distance+4*selene_segment, loutxw= selene_distance+10*selene_segment,
xwidth=selene_b*2, yheight=selene_b*2,
mright=scoating_11, mleft=0, mbottom=0, mtop=scoating_11,
mright=scoating_11, mleft=0, mtop=0, mbottom=scoating_11,
enableGravity=enable_gravity)
AT (0, 0, selene_distance+4*selene_segment) RELATIVE arm_selene2
@@ -104,7 +104,7 @@ COMPONENT E02_04_06 = Elliptic_guide_gravity(
linyh = selene_distance+5*selene_segment, loutyh= selene_distance+9*selene_segment,
linxw = selene_distance+5*selene_segment, loutxw= selene_distance+9*selene_segment,
xwidth=selene_b*2, yheight=selene_b*2,
mright=scoating_10, mleft=0, mbottom=0, mtop=scoating_10,
mright=scoating_10, mleft=0, mtop=0, mbottom=scoating_10,
enableGravity=enable_gravity)
AT (0, 0, selene_distance+5*selene_segment) RELATIVE arm_selene2
@@ -113,7 +113,7 @@ COMPONENT E02_04_07 = Elliptic_guide_gravity(
linyh = selene_distance+6*selene_segment, loutyh= selene_distance+8*selene_segment,
linxw = selene_distance+6*selene_segment, loutxw= selene_distance+8*selene_segment,
xwidth=selene_b*2, yheight=selene_b*2,
mright=scoating_09, mleft=0, mbottom=0, mtop=scoating_09,
mright=scoating_09, mleft=0, mtop=0, mbottom=scoating_09,
enableGravity=enable_gravity)
AT (0, 0, selene_distance+6*selene_segment) RELATIVE arm_selene2
@@ -122,7 +122,7 @@ COMPONENT E02_04_08 = Elliptic_guide_gravity(
linyh = selene_distance+7*selene_segment, loutyh= selene_distance+7*selene_segment,
linxw = selene_distance+7*selene_segment, loutxw= selene_distance+7*selene_segment,
xwidth=selene_b*2, yheight=selene_b*2,
mright=scoating_08, mleft=0, mbottom=0, mtop=scoating_08,
mright=scoating_08, mleft=0, mtop=0, mbottom=scoating_08,
enableGravity=enable_gravity)
AT (0, 0, selene_distance+7*selene_segment) RELATIVE arm_selene2
@@ -131,7 +131,7 @@ COMPONENT E02_04_09 = Elliptic_guide_gravity(
linyh = selene_distance+8*selene_segment, loutyh= selene_distance+6*selene_segment,
linxw = selene_distance+8*selene_segment, loutxw= selene_distance+6*selene_segment,
xwidth=selene_b*2, yheight=selene_b*2,
mright=scoating_07, mleft=0, mbottom=0, mtop=scoating_07,
mright=scoating_07, mleft=0, mtop=0, mbottom=scoating_07,
enableGravity=enable_gravity)
AT (0, 0, selene_distance+8*selene_segment) RELATIVE arm_selene2
@@ -140,7 +140,7 @@ COMPONENT E02_04_10 = Elliptic_guide_gravity(
linyh = selene_distance+9*selene_segment, loutyh= selene_distance+5*selene_segment,
linxw = selene_distance+9*selene_segment, loutxw= selene_distance+5*selene_segment,
xwidth=selene_b*2, yheight=selene_b*2,
mright=scoating_06, mleft=0, mbottom=0, mtop=scoating_06,
mright=scoating_06, mleft=0, mtop=0, mbottom=scoating_06,
enableGravity=enable_gravity)
AT (0, 0, selene_distance+9*selene_segment) RELATIVE arm_selene2
@@ -149,7 +149,7 @@ COMPONENT E02_04_11 = Elliptic_guide_gravity(
linyh = selene_distance+10*selene_segment, loutyh= selene_distance+4*selene_segment,
linxw = selene_distance+10*selene_segment, loutxw= selene_distance+4*selene_segment,
xwidth=selene_b*2, yheight=selene_b*2,
mright=scoating_05, mleft=0, mbottom=0, mtop=scoating_05,
mright=scoating_05, mleft=0, mtop=0, mbottom=scoating_05,
enableGravity=enable_gravity)
AT (0, 0, selene_distance+10*selene_segment) RELATIVE arm_selene2
@@ -158,7 +158,7 @@ COMPONENT E02_04_12 = Elliptic_guide_gravity(
linyh = selene_distance+11*selene_segment, loutyh= selene_distance+3*selene_segment,
linxw = selene_distance+11*selene_segment, loutxw= selene_distance+3*selene_segment,
xwidth=selene_b*2, yheight=selene_b*2,
mright=scoating_04, mleft=0, mbottom=0, mtop=scoating_04,
mright=scoating_04, mleft=0, mtop=0, mbottom=scoating_04,
enableGravity=enable_gravity)
AT (0, 0, selene_distance+11*selene_segment) RELATIVE arm_selene2
@@ -167,7 +167,7 @@ COMPONENT E02_04_13 = Elliptic_guide_gravity(
linyh = selene_distance+12*selene_segment, loutyh= selene_distance+2*selene_segment,
linxw = selene_distance+12*selene_segment, loutxw= selene_distance+2*selene_segment,
xwidth=selene_b*2, yheight=selene_b*2,
mright=scoating_03, mleft=0, mbottom=0, mtop=scoating_03,
mright=scoating_03, mleft=0, mtop=0, mbottom=scoating_03,
enableGravity=enable_gravity)
AT (0, 0, selene_distance+12*selene_segment) RELATIVE arm_selene2
@@ -176,7 +176,7 @@ COMPONENT E02_04_14 = Elliptic_guide_gravity(
linyh = selene_distance+13*selene_segment, loutyh= selene_distance+1*selene_segment,
linxw = selene_distance+13*selene_segment, loutxw= selene_distance+1*selene_segment,
xwidth=selene_b*2, yheight=selene_b*2,
mright=scoating_02, mleft=0, mbottom=0, mtop=scoating_02,
mright=scoating_02, mleft=0, mtop=0, mbottom=scoating_02,
enableGravity=enable_gravity)
AT (0, 0, selene_distance+13*selene_segment) RELATIVE arm_selene2
@@ -185,14 +185,14 @@ COMPONENT E02_04_15 = Elliptic_guide_gravity(
linyh = selene_distance+14*selene_segment, loutyh= selene_distance,
linxw = selene_distance+14*selene_segment, loutxw= selene_distance,
xwidth=selene_b*2, yheight=selene_b*2,
mright=scoating_01, mleft=0, mbottom=0, mtop=scoating_01,
mright=scoating_01, mleft=0, mtop=0, mbottom=scoating_01,
enableGravity=enable_gravity)
AT (0, 0, selene_distance+14*selene_segment) RELATIVE arm_selene2
/* Absorber to cut direct view beam (Bor-Al in CAD model) */
COMPONENT slit_after_selene_guide_2 = Slit(
xmin = -selene_entry-0.001, xmax=0, xmax = 0.0,
ymin = 0, ymax = selene_entry+0.01)
ymin = -selene_entry-0.005, ymax = 0)
AT (0, 0, 2*selene_c-selene_distance+0.001) RELATIVE arm_selene2
COMPONENT block_after_selene_guide_2 = Absorber(
+515 -697
View File
File diff suppressed because it is too large Load Diff
-58
View File
@@ -1,58 +0,0 @@
4.37173E-05 0.253838498
0.001967279 0.548126562
0.004240578 0.781912929
0.006513878 0.831781609
0.008656026 0.935568791
0.010841891 0.996046699
0.012984039 0.994254859
0.015038752 0.780745054
0.017443204 0.571166135
0.019497917 0.421992388
0.021771217 0.347878292
0.023913365 0.314863976
0.026317816 0.273648917
0.028241378 0.248910367
0.030514678 0.229613667
0.032700543 0.210315136
0.034711539 0.201079179
0.03711599 0.179153501
0.039301855 0.174572119
0.041444003 0.161570874
0.043629868 0.159330731
0.045772016 0.158627627
0.047957881 0.133760075
0.050231181 0.128230852
0.052373329 0.135460425
0.054559194 0.125901964
0.056701342 0.120064418
0.058974642 0.122922579
0.061160507 0.127084935
0.063171503 0.12641248
0.06548852 0.117637177
0.067630668 0.105706827
0.069903968 0.112415362
0.072089833 0.119429932
0.074231981 0.105676178
0.076417846 0.107716872
0.078428842 0.107129046
0.080833293 0.10262909
0.082888007 0.094164854
0.085161306 0.092239896
0.087303454 0.085655788
0.089620471 0.081615114
0.091631467 0.076984785
0.093817332 0.076157254
0.096090632 0.070972035
0.09823278 0.060551277
0.100287493 0.071366358
0.102691945 0.065426801
0.104834093 0.059045344
0.107019958 0.056229269
0.109162106 0.061290519
0.111347971 0.051160701
0.113490119 0.053836338
0.115763418 0.05839439
0.117949284 0.057514252
0.120091431 0.047536765
0.122364731 0.04877829
0.300000000 0.000000000
-58
View File
@@ -1,58 +0,0 @@
4.37173E-05 0.224586133
0.001967279 0.518057252
0.004240578 0.775672976
0.006513878 0.825879049
0.008656026 0.899985882
0.010841891 0.967789786
0.012984039 0.99196296
0.015038752 0.992909754
0.017443204 0.994177124
0.019497917 0.991424846
0.021771217 0.993887344
0.023913365 0.998648926
0.026317816 0.999361915
0.028241378 0.998678679
0.030514678 0.998109885
0.032700543 0.997772638
0.034711539 0.997392554
0.03711599 0.999600524
0.039301855 0.994779551
0.041444003 0.996274647
0.043629868 0.996149207
0.045772016 0.998305774
0.047957881 0.99658353
0.050231181 0.995950077
0.052373329 0.995563046
0.054559194 0.995479284
0.056701342 0.993347667
0.058974642 0.990508095
0.061160507 0.990476431
0.063171503 0.988754593
0.06548852 0.987959462
0.067630668 0.987058572
0.069903968 0.988939946
0.072089833 0.986821236
0.074231981 0.985149296
0.076417846 0.987362592
0.078428842 0.986507086
0.080833293 0.98295765
0.082888007 0.983313364
0.085161306 0.983817788
0.087303454 0.983554288
0.089620471 0.979763465
0.091631467 0.975348682
0.093817332 0.975887375
0.096090632 0.972236927
0.09823278 0.965515882
0.100287493 0.962852402
0.102691945 0.956266464
0.104834093 0.953509902
0.107019958 0.945236222
0.109162106 0.808306574
0.111347971 0.186001557
0.113490119 0.078929784
0.115763418 0.051976893
0.117949284 0.05338487
0.120091431 0.04844847
0.122364731 0.053399168
0.300000000 0.000000000
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+93
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@@ -0,0 +1,93 @@
/*******************************************************************************
*
* McStas, neutron ray-tracing package
* Copyright (C) 1997-2011, All rights reserved
* Risoe National Laboratory, Roskilde, Denmark
* Institut Laue Langevin, Grenoble, France
*
* Component: ScanningSlit
*
* %I
* Written by: Jochen Stahn, based on the Slip component by
* Kim Lefmann and Henrik M. Roennow
* Date: 15. 10. 2013
* Version: $Revision: 0.00 $
* Origin: PSI
* Release: McStas 1.12c
*
* moving rectangular slit with optional insignificance cut
*
* %D
* A simple rectangular slit, where the blades in x-direction move with time.
* No transmission around the slit is allowed.
* If cutting option is used, low-weight neutron rays are ABSORBED
*
* Example: FastSlit(height=0.1)
*
* %P
* INPUT PARAMETERS
*
* height: height of the opening in y, centered.
*
* Optional parameters:
* cut: Lower limit for allowed weight (1)
*
* %E
*******************************************************************************/
DEFINE COMPONENT ScanningSlit
DEFINITION PARAMETERS ()
SETTING PARAMETERS (xmin=0, xmax=0, ymin=0, ymax=0, height=0.1, dist=2.4, lmin=4, lmax=10, omeg=0, eps=1.25, reso=0.01, dthet=1.5, posi=33.7)
OUTPUT PARAMETERS ()
/* STATE PARAMETERS (x,y,z,vx,vy,vz,t,s1,s2,p) */
DECLARE
%{
double lact;
%}
INITIALIZE
%{
if (height > 0) { ymax=height/2; ymin=-ymax; }
lmax *= (1+reso/2) ;
lmin *= (1-reso/2) ;
eps *= PI/180 ;
omeg *= PI/180 ;
dthet *= PI/180;
%}
TRACE
%{
PROP_Z0;
lact = 3.956e3*t/posi ;
xmin = -dist * (1+reso/2)*( eps + 0.5*dthet - dthet*(lact-lmin)/(lmax-lmin) ) ;
xmax = -dist * (1-reso/2)*( eps + 0.5*dthet - dthet*(lact-lmin)/(lmax-lmin) ) ;
if ((x<xmin || x>xmax || y<ymin || y>ymax))
ABSORB;
else
SCATTER;
%}
MCDISPLAY
%{
magnify("xy");
double xw, yh;
xw = (xmax - xmin)/2.0;
yh = (ymax - ymin)/2.0;
multiline(3, xmin-xw, (double)ymax, 0.0,
(double)xmin, (double)ymax, 0.0,
(double)xmin, ymax+yh, 0.0);
multiline(3, xmax+xw, (double)ymax, 0.0,
(double)xmax, (double)ymax, 0.0,
(double)xmax, ymax+yh, 0.0);
multiline(3, xmin-xw, (double)ymin, 0.0,
(double)xmin, (double)ymin, 0.0,
(double)xmin, ymin-yh, 0.0);
multiline(3, xmax+xw, (double)ymin, 0.0,
(double)xmax, (double)ymin, 0.0,
(double)xmax, ymin-yh, 0.0);
%}
END
+145
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@@ -0,0 +1,145 @@
/*******************************************************************************
* McStas instrument definition URL=http://www.mcstas.org
*
* Instrument: Selene_geometry
*
* %Identification
* Written by: Artur Glavic (artur.glavic@psi.ch); Jochen Stahn (jochen.stahn@psi.ch); Christine Klauser (christine.klauser@psi.ch)
* Date: 01. 11. 2017
* Origin: PSI
* Release: McStas 2.4.1
* Version: 1.0
* %INSTRUMENT_SITE: Estia (E02)
*
* Estia is a vertical sample, focusing reflectometer for small sample
*
* %Description
* This is a test model to analyze the impact of the displacement of the two Selene guide
* mirrors to each other and the virtual source. With this it is possible to evaluate
* necessary engineering requirements for the guide carriers.
*
* %Parameters
* sample_length: [m] Size of sample in beam direction, also controls virtual source opening
* sample_height: [m] Size of sample in vertical direction, also controls virtual source opening
* omegaa: [deg] sample rotation omega
*
* %End
*******************************************************************************/
DEFINE INSTRUMENT Selene_geometry(double sample_length=0.01, double sample_height=0.01, omegaa=1.2,
double tx_1=0.0, double tz_1=0.0, double rz_1=0.0, double ry_1=0.0,
double tx_2=0.0, double tz_2=0.0, double rz_2=0.0, double ry_2=0.0
)
DECLARE
%{
%}
INITIALIZE
%{
%}
TRACE
COMPONENT origin = Progress_bar()
AT (0,0,0) ABSOLUTE
COMPONENT ISCS = Arm()
AT (0, 0, 0) RELATIVE origin
COMPONENT arm_selene1 = Arm()
AT (tx_1, 0, tz_1) RELATIVE ISCS
ROTATED (0, ry_1, rz_1) RELATIVE ISCS
COMPONENT arm_selene2 = Arm()
AT (tx_2, 0, 2*selene_c+tz_2) RELATIVE ISCS
ROTATED (0, ry_2, rz_2) RELATIVE ISCS
COMPONENT arm_virtual_source_beam = Arm()
AT (0, 0, 0) RELATIVE arm_selene1
ROTATED (0, 1.25, 0) RELATIVE ISCS
// Axes used for the virtual source masks, this depends on the sample angle to achieve the correct footprint
COMPONENT arm_virtual_source = Arm()
AT (0, 0, 0) RELATIVE arm_virtual_source_beam
ROTATED (0, omegaa, 0) RELATIVE arm_virtual_source_beam
COMPONENT source = Moderator(radius = 0.01, focus_xw = selene_entry+0.002, focus_yh = selene_entry+0.002,
target_index=3, Emin=0.75, Emax=6)
AT (0,0,-0.1) RELATIVE ISCS
ROTATED (-1.25, 1.25, 0) RELATIVE ISCS
/* The actual virtual source mask, two L-shaped absorbers (first top-right) */
COMPONENT virtual_source_TR = Slit(
xmin = 0.0, xmax = 1.0, ymin = -1.0, ymax = sample_height/2)
AT (0, 0, -0.5*sample_length) RELATIVE arm_virtual_source
/* The actual virtual source mask, two L-shaped absorbers (second bottom-left) */
COMPONENT virtual_source_BL = Slit(
xmin = -1.0, xmax = 0.0, ymin = -sample_height/2, ymax = 1.0)
AT (0, 0, 0.5*sample_length) RELATIVE arm_virtual_source
%include "Estia_selene.instr"
COMPONENT M_n3 = Monitor_nD(
filename = "M_n3",
options = "x limits=[-0.05 0.05] bins=1000 y limits=[-0.05 0.05] bins=1000 lambda limits=[0 35] bins=350",
xwidth = 0.5, yheight = 0.5)
AT (0, 0, 4*selene_c-0.01) RELATIVE ISCS
ROTATED (0, 1.25+omegaa, 0) RELATIVE ISCS
COMPONENT M_n2 = Monitor_nD(
filename = "M_n2",
options = "x limits=[-0.05 0.05] bins=1000 y limits=[-0.05 0.05] bins=1000 lambda limits=[0 35] bins=350",
xwidth = 0.5, yheight = 0.5)
AT (0, 0, 4*selene_c-0.005) RELATIVE ISCS
ROTATED (0, 1.25+omegaa, 0) RELATIVE ISCS
COMPONENT M_n1 = Monitor_nD(
filename = "M_n1",
options = "x limits=[-0.05 0.05] bins=1000 y limits=[-0.05 0.05] bins=1000 lambda limits=[0 35] bins=350",
xwidth = 0.5, yheight = 0.5)
AT (0, 0, 4*selene_c-0.0025) RELATIVE ISCS
ROTATED (0, 1.25+omegaa, 0) RELATIVE ISCS
COMPONENT M_0 = Monitor_nD(
filename = "M_0",
options = "x limits=[-0.05 0.05] bins=1000 y limits=[-0.05 0.05] bins=1000 lambda limits=[0 35] bins=350",
xwidth = 0.5, yheight = 0.5)
AT (0, 0, 4*selene_c) RELATIVE ISCS
ROTATED (0, 1.25+omegaa, 0) RELATIVE ISCS
COMPONENT MFP = Monitor_nD(
filename = "MFP",
options = "x limits=[-0.05 0.05] bins=1000 y limits=[-0.05 0.05] bins=1000 lambda limits=[0 35] bins=350",
xwidth = 0.5, yheight = 0.5)
AT (0, 0, 4*selene_c+0.0001) RELATIVE ISCS
ROTATED (0, 1.25+omegaa-90, 0) RELATIVE ISCS
COMPONENT M_p1 = Monitor_nD(
filename = "M_p1",
options = "x limits=[-0.05 0.05] bins=1000 y limits=[-0.05 0.05] bins=1000 lambda limits=[0 35] bins=350",
xwidth = 0.5, yheight = 0.5)
AT (0, 0, 4*selene_c+0.0025) RELATIVE ISCS
ROTATED (0, 1.25+omegaa, 0) RELATIVE ISCS
COMPONENT M_p2 = Monitor_nD(
filename = "M_p2",
options = "x limits=[-0.05 0.05] bins=1000 y limits=[-0.05 0.05] bins=1000 lambda limits=[0 35] bins=350",
xwidth = 0.5, yheight = 0.5)
AT (0, 0, 4*selene_c+0.005) RELATIVE ISCS
ROTATED (0, 1.25+omegaa, 0) RELATIVE ISCS
COMPONENT M_p3 = Monitor_nD(
filename = "M_p3",
options = "x limits=[-0.05 0.05] bins=1000 y limits=[-0.05 0.05] bins=1000 lambda limits=[0 35] bins=350",
xwidth = 0.5, yheight = 0.5)
AT (0, 0, 4*selene_c+0.01) RELATIVE ISCS
ROTATED (0, 1.25+omegaa, 0) RELATIVE ISCS
FINALLY
%{
%}
END
+2 -4
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@@ -1,6 +1,4 @@
#!/bin/bash
export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/afs/psi.ch/project/sinq/sl6-64/mcstas2.4/mcstas/2.4/libs
if [ Estia_baseline.instr -nt Estia_baseline.out ] || [ ! -f Estia_baseline.out ] \
|| [ Estia_feeder.instr -nt Estia_baseline.out ] \
@@ -8,6 +6,6 @@ if [ Estia_baseline.instr -nt Estia_baseline.out ] || [ ! -f Estia_baseline.out
|| [ Estia_mf.instr -nt Estia_baseline.out ] \
|| [ Estia_selene2.instr -nt Estia_baseline.out ]; then
rm Estia_baseline.c Estia_baseline.out
mcstas -o Estia_baseline.c Estia_baseline.instr --trace
mpicc -O2 -o Estia_baseline.out Estia_baseline.c -lm -DUSE_MPI -DUSE_NEXUS -lNeXus
mcstas -o Estia_baseline.c Estia_baseline.instr
mpicc -O3 -o Estia_baseline.out Estia_baseline.c -lm -DUSE_MPI
fi
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mcc05:72
mcc06:72
+1002
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+1002
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+102
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0.00 1.000
0.01 0.0099682
0.0149 0.0042479
0.0198 0.0022557
0.0247 0.0013447
0.0296 0.00086176
0.0345 0.000582
0.0394 0.0004107
0.0443 0.00030205
0.0492 0.00023151
0.0541 0.0001849
0.059 0.00015356
0.0639 0.00013197
0.0688 0.00011657
0.0737 0.00010502
0.0786 9.58E-05
0.0835 8.80E-05
0.0884 8.11E-05
0.0933 7.47E-05
0.0982 6.88E-05
0.1031 6.33E-05
0.108 5.82E-05
0.1129 5.35E-05
0.1178 4.94E-05
0.1227 4.57E-05
0.1276 4.24E-05
0.1325 3.96E-05
0.1374 3.71E-05
0.1423 3.48E-05
0.1472 3.27E-05
0.1521 3.08E-05
0.157 2.89E-05
0.1619 2.71E-05
0.1668 2.53E-05
0.1717 2.35E-05
0.1766 2.17E-05
0.1815 2.00E-05
0.1864 1.83E-05
0.1913 1.66E-05
0.1962 1.51E-05
0.2011 1.36E-05
0.206 1.22E-05
0.2109 1.08E-05
0.2158 9.61E-06
0.2207 8.46E-06
0.2256 7.39E-06
0.2305 6.39E-06
0.2354 5.46E-06
0.2403 4.61E-06
0.2452 3.84E-06
0.2501 3.16E-06
0.255 2.55E-06
0.2599 2.04E-06
0.2648 1.61E-06
0.2697 1.26E-06
0.2746 9.93E-07
0.2795 7.98E-07
0.2844 6.64E-07
0.2893 5.82E-07
0.2942 5.39E-07
0.2991 5.24E-07
0.304 5.28E-07
0.3089 5.41E-07
0.3138 5.58E-07
0.3187 5.73E-07
0.3236 5.83E-07
0.3285 5.88E-07
0.3334 5.88E-07
0.3383 5.84E-07
0.3432 5.77E-07
0.3481 5.69E-07
0.353 5.62E-07
0.3579 5.57E-07
0.3628 5.53E-07
0.3677 5.52E-07
0.3726 5.53E-07
0.3775 5.56E-07
0.3824 5.61E-07
0.3873 5.67E-07
0.3922 5.74E-07
0.3971 5.81E-07
0.402 5.89E-07
0.4069 5.96E-07
0.4118 6.04E-07
0.4167 6.12E-07
0.4216 6.19E-07
0.4265 6.27E-07
0.4314 6.35E-07
0.4363 6.43E-07
0.4412 6.50E-07
0.4461 6.58E-07
0.451 6.66E-07
0.4559 6.74E-07
0.4608 6.82E-07
0.4657 6.89E-07
0.4706 6.97E-07
0.4755 7.04E-07
0.4804 7.11E-07
0.4853 7.16E-07
0.4902 7.20E-07
0.4951 7.21E-07
0.5 7.23E-07
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#!/bin/bash
mcstas -o Estia_monitor.c Estia_monitor.instr
mpicc -O3 -o Estia_monitor.out Estia_monitor.c -lm -DUSE_MPI
mpirun -np 6 Estia_monitor.out --ncount=1e8 --dir=../results/monitor --gravitation enable_windows=1 lambda_start=1.0 lambda_end=35.0 direct_beam=0
mpirun -np 6 Estia_monitor.out --ncount=1e8 --dir=../results/monitor_ref --gravitation enable_windows=1 lambda_start=1.0 lambda_end=35.0 direct_beam=2
mpirun -np 6 Estia_monitor.out --ncount=1e8 --dir=../results/monitor_trans --gravitation enable_windows=1 lambda_start=1.0 lambda_end=35.0 direct_beam=1
mpirun -np 6 Estia_monitor.out --ncount=1e8 --dir=../results/monitor100 --gravitation enable_windows=1 lambda_start=1.0 lambda_end=35.0 direct_beam=0 foil_thickness=0.0001
mpirun -np 6 Estia_monitor.out --ncount=1e8 --dir=../results/monitor001 --gravitation enable_windows=1 lambda_start=1.0 lambda_end=35.0 direct_beam=0 foil_thickness=0.000001
+213
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#!/bin/bash
DEST=../results
ncount=2e7
use_cores=4
sample=4
omega=0.8
sample_length=0.01
sample_height=0.01
lambda_start=3.0
lambda_end=32.0
###################### Brilliance Transfer 10x10mm² and 1x1mm² VS ####################
if [ Estia_baseline.instr -nt Estia_baseline.out ]; then
rm Estia_baseline.c Estia_baseline.out
mcstas -o Estia_baseline.c Estia_baseline.instr
mpicc -O3 -o Estia_baseline.out Estia_baseline.c -lm -DUSE_MPI -DUSE_NEXUS -lNeXus
fi
#
# if [ Estia_baseline_ana1.instr -nt Estia_baseline_ana1.out ]; then
# rm Estia_baseline_ana1.c Estia_baseline_ana1.out
# mcstas -o Estia_baseline_ana1.c Estia_baseline_ana1.instr
# mpicc -O3 -o Estia_baseline_ana1.out Estia_baseline_ana1.c -lm -DUSE_MPI -DUSE_NEXUS -lNeXus
# fi
#
# if [ Estia_baseline_ana2.instr -nt Estia_baseline_ana2.out ]; then
# rm Estia_baseline_ana2.c Estia_baseline_ana2.out
# mcstas -o Estia_baseline_ana2.c Estia_baseline_ana2.instr
# mpicc -O3 -o Estia_baseline_ana2.out Estia_baseline_ana2.c -lm -DUSE_MPI -DUSE_NEXUS -lNeXus
# fi
###################### Reference and Ni-layer measurement 10x10mm² sample ####################
# ncount=1e10
sample_length=0.01
sample_height=0.01
lambda_start=3.5
lambda_end=30.0
sample=1
# omega=1.0
# DESTi=$DEST/pol_ref_10x10_10
# if [ -e "$DESTi" ]; then
# rm -r "$DESTi"
# fi
#
# mpirun -np $use_cores Estia_baseline.out \
# --dir="$DESTi" --ncount=$ncount --gravitation \
# omegaa=$omega operationmode=0 theta_resolution=0.04 over_illumination=0.000 \
# sample=$sample sample_length=$sample_length sample_height=$sample_height \
# lambda_start=$lambda_start lambda_end=$lambda_end enable_gravity=1 enable_chopper=0 enable_polarizer=0 enable_analyzer=0
#
# DESTi=$DEST/pol1_10x10_10
# if [ -e "$DESTi" ]; then
# rm -r "$DESTi"
# fi
#
# mpirun -np $use_cores Estia_baseline.out \
# --dir="$DESTi" --ncount=$ncount --gravitation \
# omegaa=$omega operationmode=0 theta_resolution=0.04 over_illumination=0.000 \
# sample=$sample sample_length=$sample_length sample_height=$sample_height \
# lambda_start=$lambda_start lambda_end=$lambda_end enable_gravity=1 enable_chopper=0 enable_polarizer=1 enable_analyzer=0
#
# DESTi=$DEST/pol2_10x10_10
# if [ -e "$DESTi" ]; then
# rm -r "$DESTi"
# fi
#
# mpirun -np $use_cores Estia_baseline.out \
# --dir="$DESTi" --ncount=$ncount --gravitation \
# omegaa=$omega operationmode=0 theta_resolution=0.04 over_illumination=0.000 \
# sample=$sample sample_length=$sample_length sample_height=$sample_height \
# lambda_start=$lambda_start lambda_end=$lambda_end enable_gravity=1 enable_chopper=0 enable_polarizer=2 enable_analyzer=0
# #
# omega=7.0
# DESTi=$DEST/pol1_10x10_70
# if [ -e "$DESTi" ]; then
# rm -r "$DESTi"
# fi
#
# mpirun -np $use_cores Estia_baseline.out \
# --dir="$DESTi" --ncount=$ncount --gravitation \
# omegaa=$omega operationmode=0 theta_resolution=0.04 over_illumination=0.000 \
# sample=$sample sample_length=$sample_length sample_height=$sample_height \
# lambda_start=$lambda_start lambda_end=$lambda_end enable_gravity=1 enable_chopper=0 enable_polarizer=1 enable_analyzer=0
#
# DESTi=$DEST/pol2_10x10_70
# if [ -e "$DESTi" ]; then
# rm -r "$DESTi"
# fi
#
# mpirun -np $use_cores Estia_baseline.out \
# --dir="$DESTi" --ncount=$ncount --gravitation \
# omegaa=$omega operationmode=0 theta_resolution=0.04 over_illumination=0.000 \
# sample=$sample sample_length=$sample_length sample_height=$sample_height \
# lambda_start=$lambda_start lambda_end=$lambda_end enable_gravity=1 enable_chopper=0 enable_polarizer=2 enable_analyzer=0
#
# ncount=1e8
omega=0.0
# DESTi=$DEST/pol1_10x50_70
# if [ -e "$DESTi" ]; then
# rm -r "$DESTi"
# fi
#
# mpirun -np $use_cores Estia_baseline.out \
# --dir="$DESTi" --ncount=$ncount --gravitation \
# omegaa=$omega operationmode=0 theta_resolution=0.04 over_illumination=0.0025 \
# sample=$sample sample_length=$sample_length sample_height=$sample_height \
# lambda_start=$lambda_start lambda_end=$lambda_end enable_gravity=1 enable_chopper=0 enable_polarizer=1 enable_analyzer=0
DESTi=$DEST/pol2_10x50_70
if [ -e "$DESTi" ]; then
rm -r "$DESTi"
fi
mpirun -np $use_cores Estia_baseline.out \
--dir="$DESTi" --ncount=$ncount --gravitation \
omegaa=$omega operationmode=0 theta_resolution=0.04 over_illumination=0.0025 \
sample=$sample sample_length=$sample_length sample_height=$sample_height \
lambda_start=$lambda_start lambda_end=$lambda_end enable_gravity=1 enable_chopper=0 enable_polarizer=2 enable_analyzer=0
#
# ncount=5e9
# sample_length=0.01
# omega=1.0
# sample_length=0.003
# DESTi=$DEST/pol_ref_3x10_10
# if [ -e "$DESTi" ]; then
# rm -r "$DESTi"
# fi
#
# mpirun -np $use_cores Estia_baseline.out \
# --dir="$DESTi" --ncount=$ncount --gravitation \
# omegaa=$omega operationmode=0 theta_resolution=0.04 over_illumination=0.000 \
# sample=$sample sample_length=$sample_length sample_height=$sample_height \
# lambda_start=$lambda_start lambda_end=$lambda_end enable_gravity=1 enable_chopper=0 enable_polarizer=0 enable_analyzer=0
#
# DESTi=$DEST/pol1_3x10_10
# if [ -e "$DESTi" ]; then
# rm -r "$DESTi"
# fi
#
# mpirun -np $use_cores Estia_baseline.out \
# --dir="$DESTi" --ncount=$ncount --gravitation \
# omegaa=$omega operationmode=0 theta_resolution=0.04 over_illumination=0.000 \
# sample=$sample sample_length=$sample_length sample_height=$sample_height \
# lambda_start=$lambda_start lambda_end=$lambda_end enable_gravity=1 enable_chopper=0 enable_polarizer=1 enable_analyzer=0
#
# DESTi=$DEST/pol2_3x10_10
# if [ -e "$DESTi" ]; then
# rm -r "$DESTi"
# fi
#
# mpirun -np $use_cores Estia_baseline.out \
# --dir="$DESTi" --ncount=$ncount --gravitation \
# omegaa=$omega operationmode=0 theta_resolution=0.04 over_illumination=0.000 \
# sample=$sample sample_length=$sample_length sample_height=$sample_height \
# lambda_start=$lambda_start lambda_end=$lambda_end enable_gravity=1 enable_chopper=0 enable_polarizer=2 enable_analyzer=0
#
#
# sample_height=0.01
# sample_length=0.01
# DESTi=$DEST/ana1_10x10_10
# if [ -e "$DESTi" ]; then
# rm -r "$DESTi"
# fi
#
# mpirun -np $use_cores Estia_baseline.out \
# --dir="$DESTi" --ncount=$ncount --gravitation \
# omegaa=$omega operationmode=0 theta_resolution=0.04 over_illumination=0.000 \
# sample=$sample sample_length=$sample_length sample_height=$sample_height \
# lambda_start=$lambda_start lambda_end=$lambda_end enable_gravity=1 enable_chopper=0 enable_polarizer=0 enable_analyzer=1
# sample_height=0.001
# DESTi=$DEST/ana1_10x1_10
# if [ -e "$DESTi" ]; then
# rm -r "$DESTi"
# fi
#
# mpirun -np $use_cores Estia_baseline_ana1.out \
# --dir="$DESTi" --ncount=$ncount --gravitation \
# omegaa=$omega operationmode=0 theta_resolution=0.04 over_illumination=0.000 \
# sample=$sample sample_length=$sample_length sample_height=$sample_height \
# lambda_start=$lambda_start lambda_end=$lambda_end enable_gravity=1 enable_chopper=0 enable_polarizer=0 enable_analyzer=1
#
# sample_height=0.01
# DESTi=$DEST/ana2_10x10_10
# if [ -e "$DESTi" ]; then
# rm -r "$DESTi"
# fi
#
# mpirun -np $use_cores Estia_baseline.out \
# --dir="$DESTi" --ncount=$ncount --gravitation \
# omegaa=$omega operationmode=0 theta_resolution=0.04 over_illumination=0.000 \
# sample=$sample sample_length=$sample_length sample_height=$sample_height \
# lambda_start=$lambda_start lambda_end=$lambda_end enable_gravity=1 enable_chopper=0 enable_polarizer=0 enable_analyzer=2
# sample_height=0.001
# DESTi=$DEST/ana2_10x1_10
# if [ -e "$DESTi" ]; then
# rm -r "$DESTi"
# fi
#
# mpirun -np $use_cores Estia_baseline_ana2.out \
# --dir="$DESTi" --ncount=$ncount --gravitation \
# omegaa=$omega operationmode=0 theta_resolution=0.04 over_illumination=0.000 \
# sample=$sample sample_length=$sample_length sample_height=$sample_height \
# lambda_start=$lambda_start lambda_end=$lambda_end enable_gravity=1 enable_chopper=0 enable_polarizer=0 enable_analyzer=2
###################### Reference and Ni-layer measurement 1x1mm² sample ####################
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#!/usr/bin/env python
#-*- coding: utf8 -*-
import sys, os
from subprocess import call
from numpy import *
from scipy.optimize import leastsq
CALL='/afs/psi.ch/project/sinq/sl6-64/bin/mpirun -np $SLURM_NPROCS Estia_baseline.out '
CALL=+'--dir=../results/selene_geo --ncount=1e9 '
CALL=+'omegaa=1.0 sample=4 sample_length=0.001 sample_height=0.01 '
CALL=+'lambda_start=2.5 lambda_end=15.0 enable_gravity=1 enable_chopper=1 '
CALL=+'lambda_min=3.75 selene1_foot1y=%.4f selene1_foot2y=%.4f '
def B(x,w):
# box function with full width w
return float32(abs(x)<=(w/2.))
def G(x,I0,x0,sigma):
# Gaussian with intensity I0, center x0 and standard deviation sigma
return I0*exp(-0.5*(x-x0)**2/sigma**2)
def Intensity(x, p):
I0, x0, sigma, w=p
return convolve(B(xc,w), G(xc, I0, x0, sigma), mode='same')
def Beam(x,I0,x0,sigma,w):
I=I0*where((x-x0)<(-w/2.), exp(-0.5*(x-x0+w/2.)**2/sigma**2),
where((x-x0)>(w/2.), exp(-0.5*(x-x0-w/2.)**2/sigma**2), 1.))
return I
def residuals(p, x, y):
I0, x0, sigma, w=p
return y-Beam(x, I0, x0, sigma, w)
def FWHM(pi):
rng=xc[where(Beam(xc, *pi)>=(pi[0]/2.))[0]]
return rng[-1]-rng[0]
x=linspace(-10.0005, 10.0005, 20001)
xc=(x[1:]+x[:-1])/2.
def analyze(fi):
sim=mr.McSim(fi)
det=sim['tof_sample']
ignore,y=det.project1d('x', bins=x/1000.)
p,res=leastsq(residuals, (y.max(), (xc*y).sum()/y.sum(), 0.01, 0.1), (xc, y))
return p,det
if __name__=='__main__':
pass
+86
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#!/bin/bash
DEST=../results
use_cores=6
###################### Compile model if necessary ####################
bash compile_if_neede.sh
######## Reference and Ni-layer conventional measurement 10x10mm² sample #############
ncount=1e10
sample_length=0.01
sample_height=0.01
lambda_start=3.25
lambda_min=3.75
lambda_end=12.75
sample=1
omega=1.0
DESTi=$DEST/tof_reference_10x10_10
if [ -e "$DESTi" ]; then
rm -r "$DESTi"
fi
mpirun -np $use_cores Estia_baseline.out \
--dir="$DESTi" --format=NeXuS --ncount=$ncount --gravitation \
omegaa=$omega operationmode=1 theta_resolution=0.01 over_illumination=0.0001 \
sample=$sample sample_length=$sample_length sample_height=$sample_height \
lambda_start=$lambda_start lambda_min=$lambda_min lambda_end=$lambda_end enable_gravity=1 enable_chopper=1
# Ni Sample
ncount=2e10
sample=2
omega=0.5
DESTi=$DEST/tof_nickle_10x10_05
if [ -e "$DESTi" ]; then
rm -r "$DESTi"
fi
mpirun -np $use_cores Estia_baseline.out \
--dir="$DESTi" --format=NeXuS --ncount=$ncount --gravitation \
omegaa=$omega operationmode=1 theta_resolution=0.03 over_illumination=0.0001 \
sample=$sample sample_length=$sample_length sample_height=$sample_height \
lambda_start=$lambda_start lambda_min=$lambda_min lambda_end=$lambda_end enable_gravity=1 enable_chopper=1
ncount=1e10
omega=1.2
DESTi=$DEST/tof_nickle_10x10_12
if [ -e "$DESTi" ]; then
rm -r "$DESTi"
fi
mpirun -np $use_cores Estia_baseline.out \
--dir="$DESTi" --format=NeXuS --ncount=$ncount --gravitation \
omegaa=$omega operationmode=1 theta_resolution=0.03 over_illumination=0.0001 \
sample=$sample sample_length=$sample_length sample_height=$sample_height \
lambda_start=$lambda_start lambda_min=$lambda_min lambda_end=$lambda_end enable_gravity=1 enable_chopper=1
ncount=5e9
omega=3.0
DESTi=$DEST/tof_nickle_10x10_30
if [ -e "$DESTi" ]; then
rm -r "$DESTi"
fi
mpirun -np $use_cores Estia_baseline.out \
--dir="$DESTi" --format=NeXuS --ncount=$ncount --gravitation \
omegaa=$omega operationmode=1 theta_resolution=0.03 over_illumination=0.0001 \
sample=$sample sample_length=$sample_length sample_height=$sample_height \
lambda_start=$lambda_start lambda_min=$lambda_min lambda_end=$lambda_end enable_gravity=1 enable_chopper=1
ncount=2e9
omega=7.5
DESTi=$DEST/tof_nickle_10x10_75
if [ -e "$DESTi" ]; then
rm -r "$DESTi"
fi
mpirun -np $use_cores Estia_baseline.out \
--dir="$DESTi" --format=NeXuS --ncount=$ncount --gravitation \
omegaa=$omega operationmode=1 theta_resolution=0.03 over_illumination=0.0001 \
sample=$sample sample_length=$sample_length sample_height=$sample_height \
lambda_start=$lambda_start lambda_min=$lambda_min lambda_end=$lambda_end enable_gravity=1 enable_chopper=1
###################### Reference and Ni-layer measurement 1x1mm² sample ####################
+46
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#!/bin/bash
DEST=../results
ncount=1e9
use_cores=6
sample=4
omega=0.8
sample_length=0.01
sample_height=0.01
lambda_start=3.0
lambda_end=32.0
bash compile_if_neede.sh
################# Reference and Ni-layer measurement 2 pulse skipping ####################
ncount=4e9
sample_length=0.01
sample_height=0.01
lambda_start=3.9
lambda_end=24.0
sample=1
omega=2.0
DESTi=$DEST/single_skip_reference
if [ -e "$DESTi" ]; then
rm -r "$DESTi"
fi
mpirun -np $use_cores Estia_baseline.out \
--dir="$DESTi" --format=NeXuS --ncount=$ncount --gravitation \
omegaa=$omega operationmode=0 theta_resolution=0.04 over_illumination=0.0002 \
sample=$sample sample_length=$sample_length sample_height=$sample_height \
lambda_start=$lambda_start lambda_end=$lambda_end enable_gravity=1 enable_chopper=3
sample=2
DESTi=$DEST/single_skip_nickle
if [ -e "$DESTi" ]; then
rm -r "$DESTi"
fi
mpirun -np $use_cores Estia_baseline.out \
--dir="$DESTi" --format=NeXuS --ncount=$ncount --gravitation \
omegaa=$omega operationmode=0 theta_resolution=0.04 over_illumination=0.0002 \
sample=$sample sample_length=$sample_length sample_height=$sample_height \
lambda_start=$lambda_start lambda_end=$lambda_end enable_gravity=1 enable_chopper=3
+119
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#!/bin/bash
DEST=../results
ncount=1e9
use_cores=6
sample=1
omega=15.0
sample_length=0.02
sample_height=0.01
lambda_start=3.5
lambda_min=5.0
lambda_end=15.5
frame_usage=0.92
###################### Brilliance Transfer 10x10mm² and 1x1mm² VS ####################
bash compile_if_neede.sh
###################### Reference and Ni-layer measurement 10x10mm² sample ####################
frame_usage=0.92
DESTi=$DEST/chopper_f1_092
if [ -e "$DESTi" ]; then
rm -r "$DESTi"
fi
mpirun -np $use_cores Estia_baseline.out \
--dir="$DESTi" --format=NeXuS --ncount=$ncount \
omegaa=$omega operationmode=0 theta_resolution=0.04 over_illumination=0.0001 \
sample=$sample sample_length=$sample_length sample_height=$sample_height \
lambda_start=$lambda_start lambda_end=$lambda_end enable_gravity=0 enable_chopper=1 \
frame_usage=$frame_usage lambda_min=$lambda_min
frame_usage=0.94
DESTi=$DEST/chopper_f1_094
if [ -e "$DESTi" ]; then
rm -r "$DESTi"
fi
mpirun -np $use_cores Estia_baseline.out \
--dir="$DESTi" --format=NeXuS --ncount=$ncount \
omegaa=$omega operationmode=0 theta_resolution=0.04 over_illumination=0.0001 \
sample=$sample sample_length=$sample_length sample_height=$sample_height \
lambda_start=$lambda_start lambda_end=$lambda_end enable_gravity=0 enable_chopper=1 \
frame_usage=$frame_usage lambda_min=$lambda_min
frame_usage=0.96
DESTi=$DEST/chopper_f1_096
if [ -e "$DESTi" ]; then
rm -r "$DESTi"
fi
mpirun -np $use_cores Estia_baseline.out \
--dir="$DESTi" --format=NeXuS --ncount=$ncount \
omegaa=$omega operationmode=0 theta_resolution=0.04 over_illumination=0.0001 \
sample=$sample sample_length=$sample_length sample_height=$sample_height \
lambda_start=$lambda_start lambda_end=$lambda_end enable_gravity=0 enable_chopper=1 \
frame_usage=$frame_usage lambda_min=$lambda_min
frame_usage=0.974
DESTi=$DEST/chopper_f1_097s
if [ -e "$DESTi" ]; then
rm -r "$DESTi"
fi
mpirun -np $use_cores Estia_baseline.out \
--dir="$DESTi" --format=NeXuS --ncount=$ncount \
omegaa=$omega operationmode=0 theta_resolution=0.04 over_illumination=0.0001 \
sample=$sample sample_length=$sample_length sample_height=$sample_height \
lambda_start=$lambda_start lambda_end=$lambda_end enable_gravity=0 enable_chopper=1 \
frame_usage=$frame_usage lambda_min=$lambda_min
frame_usage=0.98
DESTi=$DEST/chopper_f1_098
if [ -e "$DESTi" ]; then
rm -r "$DESTi"
fi
mpirun -np $use_cores Estia_baseline.out \
--dir="$DESTi" --format=NeXuS --ncount=$ncount \
omegaa=$omega operationmode=0 theta_resolution=0.04 over_illumination=0.0001 \
sample=$sample sample_length=$sample_length sample_height=$sample_height \
lambda_start=$lambda_start lambda_end=$lambda_end enable_gravity=0 enable_chopper=1 \
frame_usage=$frame_usage lambda_min=$lambda_min
frame_usage=0.99
DESTi=$DEST/chopper_f1_099
if [ -e "$DESTi" ]; then
rm -r "$DESTi"
fi
mpirun -np $use_cores Estia_baseline.out \
--dir="$DESTi" --format=NeXuS --ncount=$ncount \
omegaa=$omega operationmode=0 theta_resolution=0.04 over_illumination=0.0001 \
sample=$sample sample_length=$sample_length sample_height=$sample_height \
lambda_start=$lambda_start lambda_end=$lambda_end enable_gravity=0 enable_chopper=1 \
frame_usage=$frame_usage lambda_min=$lambda_min
frame_usage=0.98
lambda_start=2.75
lambda_min=3.75
lambda_end=12.75
DESTi=$DEST/chopper_f1_375A
if [ -e "$DESTi" ]; then
rm -r "$DESTi"
fi
mpirun -np $use_cores Estia_baseline.out \
--dir="$DESTi" --format=NeXuS --ncount=$ncount \
omegaa=$omega operationmode=0 theta_resolution=0.04 over_illumination=0.0001 \
sample=$sample sample_length=$sample_length sample_height=$sample_height \
lambda_start=$lambda_start lambda_end=$lambda_end enable_gravity=0 enable_chopper=1 \
frame_usage=$frame_usage lambda_min=$lambda_min
###################### Reference and Ni-layer measurement 1x1mm² sample ####################
+251
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#!/bin/tcsh
#SBATCH -J mcEstia
#SBATCH -N 6
#SBATCH --ntasks-per-node=24
#SBATCH --time=2-00:00:00
#SBATCH --mail-type=fail
#SBATCH --mail-user=artur.glavic@psi.ch
#SBATCH -o stdout.log
#SBATCH -e stderr.log
#SBATCH --partition=medium
echo "Starting at `date`"
echo "Running on hosts: $SLURM_NODELIST"
echo "Running on $SLURM_NNODES nodes."
echo "Running on $SLURM_NPROCS processors."
echo "Current working directory is `pwd`"
module load mcstas
bash compile_if_needed.sh
set DEST=../results
set ncount=1e10
set use_cores=4
set sample=1
set sample_length=0.03
set sample_height=0.01
set lambda_start=3.5
set lambda_end=14.0
################## Reference ########################
set omega=1.0
set DESTi=$DEST/solid_liquid_reference
if ( -e "$DESTi" ) then
rm -r "$DESTi"
endif
mpirun -np $use_cores Estia_baseline.out \
--dir="$DESTi" --ncount=$ncount --gravitation \
omegaa=$omega operationmode=1 theta_resolution=0.04 over_illumination=0.0025 \
sample=$sample sample_length=$sample_length sample_height=$sample_height \
lambda_start=$lambda_start lambda_end=$lambda_end enable_gravity=1 enable_chopper=1 enable_polarizer=0 enable_analyzer=0
################## H2O ########################
set ncount=1e11
set sample=5
set omega=0.2
set DESTi=$DEST/solid_liquid_h2o_02
if ( -e "$DESTi" ) then
rm -r "$DESTi"
endif
mpirun -np $use_cores Estia_baseline.out \
--dir="$DESTi" --ncount=$ncount --gravitation \
omegaa=$omega operationmode=1 theta_resolution=0.04 over_illumination=0.0025 \
sample=$sample sample_length=$sample_length sample_height=$sample_height \
lambda_start=$lambda_start lambda_end=$lambda_end enable_gravity=1 enable_chopper=1 enable_polarizer=0 enable_analyzer=0
set ncount=1e10
set omega=0.5
set DESTi=$DEST/solid_liquid_h2o_05
if ( -e "$DESTi" ) then
rm -r "$DESTi"
endif
mpirun -np $use_cores Estia_baseline.out \
--dir="$DESTi" --ncount=$ncount --gravitation \
omegaa=$omega operationmode=1 theta_resolution=0.04 over_illumination=0.0025 \
sample=$sample sample_length=$sample_length sample_height=$sample_height \
lambda_start=$lambda_start lambda_end=$lambda_end enable_gravity=1 enable_chopper=1 enable_polarizer=0 enable_analyzer=0
set ncount=4e9
set omega=1.2
set DESTi=$DEST/solid_liquid_h2o_12
if ( -e "$DESTi" ) then
rm -r "$DESTi"
endif
mpirun -np $use_cores Estia_baseline.out \
--dir="$DESTi" --ncount=$ncount --gravitation \
omegaa=$omega operationmode=1 theta_resolution=0.04 over_illumination=0.0025 \
sample=$sample sample_length=$sample_length sample_height=$sample_height \
lambda_start=$lambda_start lambda_end=$lambda_end enable_gravity=1 enable_chopper=1 enable_polarizer=0 enable_analyzer=0
set ncount=2e9
set omega=3.1
set DESTi=$DEST/solid_liquid_h2o_31
if ( -e "$DESTi" ) then
rm -r "$DESTi"
endif
mpirun -np $use_cores Estia_baseline.out \
--dir="$DESTi" --ncount=$ncount --gravitation \
omegaa=$omega operationmode=1 theta_resolution=0.04 over_illumination=0.0025 \
sample=$sample sample_length=$sample_length sample_height=$sample_height \
lambda_start=$lambda_start lambda_end=$lambda_end enable_gravity=1 enable_chopper=1 enable_polarizer=0 enable_analyzer=0
set ncount=1e9
set omega=7.8
set DESTi=$DEST/solid_liquid_h2o_78
if ( -e "$DESTi" ) then
rm -r "$DESTi"
endif
mpirun -np $use_cores Estia_baseline.out \
--dir="$DESTi" --ncount=$ncount --gravitation \
omegaa=$omega operationmode=1 theta_resolution=0.04 over_illumination=0.0025 \
sample=$sample sample_length=$sample_length sample_height=$sample_height \
lambda_start=$lambda_start lambda_end=$lambda_end enable_gravity=1 enable_chopper=1 enable_polarizer=0 enable_analyzer=0
################## D2O ########################
set ncount=1e11
set sample=6
set omega=0.2
set DESTi=$DEST/solid_liquid_d2o_02
if ( -e "$DESTi" ) then
rm -r "$DESTi"
endif
mpirun -np $use_cores Estia_baseline.out \
--dir="$DESTi" --ncount=$ncount --gravitation \
omegaa=$omega operationmode=1 theta_resolution=0.04 over_illumination=0.0025 \
sample=$sample sample_length=$sample_length sample_height=$sample_height \
lambda_start=$lambda_start lambda_end=$lambda_end enable_gravity=1 enable_chopper=1 enable_polarizer=0 enable_analyzer=0
set ncount=1e10
set omega=0.5
set DESTi=$DEST/solid_liquid_d2o_05
if ( -e "$DESTi" ) then
rm -r "$DESTi"
endif
mpirun -np $use_cores Estia_baseline.out \
--dir="$DESTi" --ncount=$ncount --gravitation \
omegaa=$omega operationmode=1 theta_resolution=0.04 over_illumination=0.0025 \
sample=$sample sample_length=$sample_length sample_height=$sample_height \
lambda_start=$lambda_start lambda_end=$lambda_end enable_gravity=1 enable_chopper=1 enable_polarizer=0 enable_analyzer=0
set ncount=4e9
set omega=1.2
set DESTi=$DEST/solid_liquid_d2o_12
if ( -e "$DESTi" ) then
rm -r "$DESTi"
endif
mpirun -np $use_cores Estia_baseline.out \
--dir="$DESTi" --ncount=$ncount --gravitation \
omegaa=$omega operationmode=1 theta_resolution=0.04 over_illumination=0.0025 \
sample=$sample sample_length=$sample_length sample_height=$sample_height \
lambda_start=$lambda_start lambda_end=$lambda_end enable_gravity=1 enable_chopper=1 enable_polarizer=0 enable_analyzer=0
set ncount=2e9
set omega=3.1
set DESTi=$DEST/solid_liquid_d2o_31
if ( -e "$DESTi" ) then
rm -r "$DESTi"
endif
mpirun -np $use_cores Estia_baseline.out \
--dir="$DESTi" --ncount=$ncount --gravitation \
omegaa=$omega operationmode=1 theta_resolution=0.04 over_illumination=0.0025 \
sample=$sample sample_length=$sample_length sample_height=$sample_height \
lambda_start=$lambda_start lambda_end=$lambda_end enable_gravity=1 enable_chopper=1 enable_polarizer=0 enable_analyzer=0
set ncount=1e9
set omega=7.8
set DESTi=$DEST/solid_liquid_d2o_78
if ( -e "$DESTi" ) then
rm -r "$DESTi"
endif
mpirun -np $use_cores Estia_baseline.out \
--dir="$DESTi" --ncount=$ncount --gravitation \
omegaa=$omega operationmode=1 theta_resolution=0.04 over_illumination=0.0025 \
sample=$sample sample_length=$sample_length sample_height=$sample_height \
lambda_start=$lambda_start lambda_end=$lambda_end enable_gravity=1 enable_chopper=1 enable_polarizer=0 enable_analyzer=0
################## SMW ########################
set ncount=1e11
set sample=7
set omega=0.2
set DESTi=$DEST/solid_liquid_smw_02
if ( -e "$DESTi" ) then
rm -r "$DESTi"
endif
mpirun -np $use_cores Estia_baseline.out \
--dir="$DESTi" --ncount=$ncount --gravitation \
omegaa=$omega operationmode=1 theta_resolution=0.04 over_illumination=0.0025 \
sample=$sample sample_length=$sample_length sample_height=$sample_height \
lambda_start=$lambda_start lambda_end=$lambda_end enable_gravity=1 enable_chopper=1 enable_polarizer=0 enable_analyzer=0
set ncount=1e10
set sample=5
set omega=0.5
set DESTi=$DEST/solid_liquid_smw_05
if ( -e "$DESTi" ) then
rm -r "$DESTi"
endif
mpirun -np $use_cores Estia_baseline.out \
--dir="$DESTi" --ncount=$ncount --gravitation \
omegaa=$omega operationmode=1 theta_resolution=0.04 over_illumination=0.0025 \
sample=$sample sample_length=$sample_length sample_height=$sample_height \
lambda_start=$lambda_start lambda_end=$lambda_end enable_gravity=1 enable_chopper=1 enable_polarizer=0 enable_analyzer=0
set ncount=4e9
set sample=5
set omega=1.2
set DESTi=$DEST/solid_liquid_smw_12
if ( -e "$DESTi" ) then
rm -r "$DESTi"
endif
mpirun -np $use_cores Estia_baseline.out \
--dir="$DESTi" --ncount=$ncount --gravitation \
omegaa=$omega operationmode=1 theta_resolution=0.04 over_illumination=0.0025 \
sample=$sample sample_length=$sample_length sample_height=$sample_height \
lambda_start=$lambda_start lambda_end=$lambda_end enable_gravity=1 enable_chopper=1 enable_polarizer=0 enable_analyzer=0
set ncount=2e9
set sample=5
set omega=3.1
set DESTi=$DEST/solid_liquid_smw_31
if ( -e "$DESTi" ) then
rm -r "$DESTi"
endif
mpirun -np $use_cores Estia_baseline.out \
--dir="$DESTi" --ncount=$ncount --gravitation \
omegaa=$omega operationmode=1 theta_resolution=0.04 over_illumination=0.0025 \
sample=$sample sample_length=$sample_length sample_height=$sample_height \
lambda_start=$lambda_start lambda_end=$lambda_end enable_gravity=1 enable_chopper=1 enable_polarizer=0 enable_analyzer=0
set ncount=1e9
set sample=5
set omega=7.8
set DESTi=$DEST/solid_liquid_smw_78
if ( -e "$DESTi" ) then
rm -r "$DESTi"
endif
mpirun -np $use_cores Estia_baseline.out \
--dir="$DESTi" --ncount=$ncount --gravitation \
omegaa=$omega operationmode=1 theta_resolution=0.04 over_illumination=0.0025 \
sample=$sample sample_length=$sample_length sample_height=$sample_height \
lambda_start=$lambda_start lambda_end=$lambda_end enable_gravity=1 enable_chopper=1 enable_polarizer=0 enable_analyzer=0
+32
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#!/bin/bash
DEST=../results
ncount=1e8
use_cores=6
sample=1
omega=0.8
sample_length=0.01
sample_height=0.015
if [ Estia_vs.instr -nt Estia_vs.out ]; then
rm Estia_vs.c Estia_vs.out
mcstas -t -o Estia_vs.c Estia_vs.instr
mpicc -O3 -o Estia_vs.out Estia_vs.c -lm -DUSE_MPI -DUSE_NEXUS -lNeXus
fi
omega=2.0
DESTi=$DEST/vs_data
if [ -e "$DESTi" ]; then
rm -r "$DESTi"
fi
mpirun -np $use_cores Estia_vs.out \
--dir="$DESTi" --format=NeXuS --ncount=$ncount --gravitation \
omegaa=$omega operationmode=0 theta_resolution=0.04 over_illumination=0.0025 \
sample=$sample sample_length=$sample_length sample_height=$sample_height \
enable_gravity=1 enable_chopper=0 source_power=5
###################### Reference and Ni-layer measurement 1x1mm² sample ####################
+40
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@@ -0,0 +1,40 @@
#!/bin/bash
#SBATCH -J mcEstia_1
#SBATCH -N 2
#SBATCH --ntasks-per-node=24
#SBATCH --time=1-00:00:00
#SBATCH --mail-type=fail
#SBATCH --mail-user=artur.glavic@psi.ch
#SBATCH -o stdout.log
#SBATCH -e stderr.log
#SBATCH --partition=ll_long
echo "Starting at `date`"
echo "Running on hosts: $SLURM_NODELIST"
echo "Running on $SLURM_NNODES nodes."
echo "Running on $SLURM_NPROCS processors."
echo "Current working directory is `pwd`"
/usr/bin/modulecmd tcsh load mcstas
bash compile_if_needed.sh
for y1 in $(seq -0.009 0.001 0.009)
do
for y2 in $(seq -0.009 0.001 0.009) $(seq -0.09 0.01 -0.01) $(seq 0.01 0.01 0.09) $(seq -0.5 0.1 -0.1) $(seq 0.1 0.1 0.5)
do
printf -v Y1 %.3f $y1
printf -v Y2 %.3f $y2
echo $Y1 $Y2
/afs/psi.ch/project/sinq/sl6-64/bin/mpirun -np $SLURM_NPROCS Estia_baseline.out \
--dir=../results/selene1_geo_$Y1\_$Y2 --ncount=1e9 \
omegaa=1.0 sample=4 sample_length=0.00005 sample_height=0.01 \
lambda_start=2.5 lambda_end=15.0 enable_gravity=1 enable_chopper=1 \
lambda_min=3.75 selene1_foot1y=$Y1 selene1_foot2y=$Y2
done
done
echo "Program finished with exit code $? at: `date`"
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#!/bin/bash
#SBATCH -J mcEstia_2
#SBATCH -N 2
#SBATCH --ntasks-per-node=24
#SBATCH --time=1-00:00:00
#SBATCH --mail-type=fail
#SBATCH --mail-user=artur.glavic@psi.ch
#SBATCH -o stdout2.log
#SBATCH -e stderr2.log
#SBATCH --partition=ll_long
echo "Starting at `date`"
echo "Running on hosts: $SLURM_NODELIST"
echo "Running on $SLURM_NNODES nodes."
echo "Running on $SLURM_NPROCS processors."
echo "Current working directory is `pwd`"
/usr/bin/modulecmd tcsh load mcstas
bash compile_if_needed.sh
for y1 in $(seq -0.09 0.01 -0.01)
do
for y2 in $(seq -0.009 0.001 0.009) $(seq -0.09 0.01 -0.01) $(seq 0.01 0.01 0.09) $(seq -0.5 0.1 -0.1) $(seq 0.1 0.1 0.5)
do
printf -v Y1 %.3f $y1
printf -v Y2 %.3f $y2
echo $Y1 $Y2
/afs/psi.ch/project/sinq/sl6-64/bin/mpirun -np $SLURM_NPROCS Estia_baseline.out \
--dir=../results/selene1_geo_$Y1\_$Y2 --ncount=1e9 \
omegaa=1.0 sample=4 sample_length=0.00005 sample_height=0.01 \
lambda_start=2.5 lambda_end=15.0 enable_gravity=1 enable_chopper=1 \
lambda_min=3.75 selene1_foot1y=$Y1 selene1_foot2y=$Y2
done
done
echo "Program finished with exit code $? at: `date`"
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#!/bin/bash
#SBATCH -J mcEstia_3
#SBATCH -N 2
#SBATCH --ntasks-per-node=24
#SBATCH --time=1-00:00:00
#SBATCH --mail-type=fail
#SBATCH --mail-user=artur.glavic@psi.ch
#SBATCH -o stdout3.log
#SBATCH -e stderr3.log
#SBATCH --partition=ll_long
echo "Starting at `date`"
echo "Running on hosts: $SLURM_NODELIST"
echo "Running on $SLURM_NNODES nodes."
echo "Running on $SLURM_NPROCS processors."
echo "Current working directory is `pwd`"
/usr/bin/modulecmd tcsh load mcstas
bash compile_if_needed.sh
for y1 in $(seq 0.01 0.01 0.09)
do
for y2 in $(seq -0.009 0.001 0.009) $(seq -0.09 0.01 -0.01) $(seq 0.01 0.01 0.09) $(seq -0.5 0.1 -0.1) $(seq 0.1 0.1 0.5)
do
printf -v Y1 %.3f $y1
printf -v Y2 %.3f $y2
echo $Y1 $Y2
/afs/psi.ch/project/sinq/sl6-64/bin/mpirun -np $SLURM_NPROCS Estia_baseline.out \
--dir=../results/selene1_geo_$Y1\_$Y2 --ncount=1e9 \
omegaa=1.0 sample=4 sample_length=0.00005 sample_height=0.01 \
lambda_start=2.5 lambda_end=15.0 enable_gravity=1 enable_chopper=1 \
lambda_min=3.75 selene1_foot1y=$Y1 selene1_foot2y=$Y2
done
done
echo "Program finished with exit code $? at: `date`"
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#!/bin/bash
#SBATCH -J mcEstia_4
#SBATCH -N 2
#SBATCH --ntasks-per-node=24
#SBATCH --time=1-00:00:00
#SBATCH --mail-type=fail
#SBATCH --mail-user=artur.glavic@psi.ch
#SBATCH -o stdout4.log
#SBATCH -e stderr4.log
#SBATCH --partition=ll_long
echo "Starting at `date`"
echo "Running on hosts: $SLURM_NODELIST"
echo "Running on $SLURM_NNODES nodes."
echo "Running on $SLURM_NPROCS processors."
echo "Current working directory is `pwd`"
/usr/bin/modulecmd tcsh load mcstas
bash compile_if_needed.sh
for y1 in $(seq -0.5 0.1 -0.1)
do
for y2 in $(seq -0.009 0.001 0.009) $(seq -0.09 0.01 -0.01) $(seq 0.01 0.01 0.09) $(seq -0.5 0.1 -0.1) $(seq 0.1 0.1 0.5)
do
printf -v Y1 %.3f $y1
printf -v Y2 %.3f $y2
echo $Y1 $Y2
/afs/psi.ch/project/sinq/sl6-64/bin/mpirun -np $SLURM_NPROCS Estia_baseline.out \
--dir=../results/selene1_geo_$Y1\_$Y2 --ncount=1e9 \
omegaa=1.0 sample=4 sample_length=0.00005 sample_height=0.01 \
lambda_start=2.5 lambda_end=15.0 enable_gravity=1 enable_chopper=1 \
lambda_min=3.75 selene1_foot1y=$Y1 selene1_foot2y=$Y2
done
done
echo "Program finished with exit code $? at: `date`"
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#!/bin/bash
#SBATCH -J mcEstia_5
#SBATCH -N 2
#SBATCH --ntasks-per-node=24
#SBATCH --time=1-00:00:00
#SBATCH --mail-type=fail
#SBATCH --mail-user=artur.glavic@psi.ch
#SBATCH -o stdout5.log
#SBATCH -e stderr5.log
#SBATCH --partition=ll_long
echo "Starting at `date`"
echo "Running on hosts: $SLURM_NODELIST"
echo "Running on $SLURM_NNODES nodes."
echo "Running on $SLURM_NPROCS processors."
echo "Current working directory is `pwd`"
/usr/bin/modulecmd tcsh load mcstas
bash compile_if_needed.sh
for y1 in $(seq 0.1 0.1 0.5)
do
for y2 in $(seq -0.009 0.001 0.009) $(seq -0.09 0.01 -0.01) $(seq 0.01 0.01 0.09) $(seq -0.5 0.1 -0.1) $(seq 0.1 0.1 0.5)
do
printf -v Y1 %.3f $y1
printf -v Y2 %.3f $y2
echo $Y1 $Y2
/afs/psi.ch/project/sinq/sl6-64/bin/mpirun -np $SLURM_NPROCS Estia_baseline.out \
--dir=../results/selene1_geo_$Y1\_$Y2 --ncount=1e9 \
omegaa=1.0 sample=4 sample_length=0.00005 sample_height=0.01 \
lambda_start=2.5 lambda_end=15.0 enable_gravity=1 enable_chopper=1 \
lambda_min=3.75 selene1_foot1y=$Y1 selene1_foot2y=$Y2
done
done
echo "Program finished with exit code $? at: `date`"
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