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ptychoScopy

Jupyter Notebook/Lab based interactive data acquisition tool designed for appropriate ptychographic data collection. It consists of SSB (Single Side Band ptychography) or full-field ITR (iterative reconstruction methods) tabs where method related charts may be found. With this tool, you can check the probe CTF, scanning step size, probe overlap, illumination uniformity, detector camera length a proper angular range collection, reconstructed probe size and many more. For in-detail intructions visit GitLab repository.

Calibration file can be found in 'ptychoscopy/calibrations.xlsx'

To start, open the file 'ptychoScopy.ipynb'

Description
PtychoScopy is a Python-based tool that supports experimental design in electron ptychography by helping users explore key parameters like probe convergence angle, defocus, and dose. It enables efficient setup and optimization of reconstructions using both direct and iterative algorithms across physical and life sciences.
Readme 2.1 MiB
Languages
Jupyter Notebook 79.1%
Python 20.9%