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Updated scripts for the new gmerlin6 cluster and other slurm changes

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bliven_s
2021-05-28 00:23:05 +02:00
parent 8ddf6f755f
commit c83e4128b2
5 changed files with 12 additions and 10 deletions
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6
.gitignore vendored Normal file
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@ -0,0 +1,6 @@
*.swo
*.swp
.DS_Store
# useful for local lanes not intended for git
/local

3
merlin6-big/cluster_script.sh
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@ -58,12 +58,11 @@
{%- if num_gpu == 0 %}
# Use CPU cluster
#SBATCH --partition=general
#SBATCH --account=merlin
#SBATCH --cpus-per-task={{ num_cpu }}
{%- else %}
# Use GPU cluster
#SBATCH --partition=gpu
#SBATCH --account=merlin-gpu
#SBATCH --cluster=gmerlin6
#SBATCH --gpus=4
#SBATCH --constraint=gpumem_11gb
{%- endif %}

7
merlin6-rtx2080ti/cluster_script.sh
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@ -53,14 +53,13 @@
{%- if num_gpu == 0 %}
# Use CPU cluster
#SBATCH --partition=general
#SBATCH --account=merlin
#SBATCH --cpus-per-task={{ num_cpu }}
{%- else %}
# Use GPU cluster
#SBATCH --partition=gpu
#SBATCH --account=merlin-gpu
#SBATCH --gpus=RTX2080Ti:{{ num_gpu }}
#SBATCH --gres=gpu:RTX2080Ti:{{ num_gpu }}
#SBATCH --cluster=gmerlin6
#SBATCH --gpus=geforce_rtx_2080_ti:{{ num_gpu }}
#SBATCH --gres=gpu:geforce_rtx_2080_ti:{{ num_gpu }}
{%- if num_gpu <= 2 %}
#SBATCH --cpus-per-task={{ _min(num_cpu, 8) }}
{%- else %}

3
merlin6-short/cluster_script.sh
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@ -56,13 +56,12 @@
# Use CPU cluster
#SBATCH --partition=hourly
#SBATCH --time=1:00:00
#SBATCH --account=merlin
#SBATCH --cpus-per-task={{ num_cpu }}
{%- else %}
# Use GPU cluster
#SBATCH --partition=gpu-short
#SBATCH --cluster=gmerlin6
#SBATCH --time=2:00:00
#SBATCH --account=merlin-gpu
#SBATCH --gpus={{ num_gpu }}
{%- if num_gpu <= 2 %}
#SBATCH --cpus-per-task={{ _min(num_cpu, 8) }}

3
merlin6/cluster_script.sh
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@ -53,12 +53,11 @@
{%- if num_gpu == 0 %}
# Use CPU cluster
#SBATCH --partition=general
#SBATCH --account=merlin
#SBATCH --cpus-per-task={{ num_cpu }}
{%- else %}
# Use GPU cluster
#SBATCH --partition=gpu
#SBATCH --account=merlin-gpu
#SBATCH --cluster=gmerlin6
#SBATCH --gpus={{ num_gpu }}
{%- if num_gpu <= 2 %}
#SBATCH --cpus-per-task={{ _min(num_cpu, 8) }}