Commit Graph

266 Commits

Author SHA1 Message Date
358944ee7f Append previous .dockerignore and requiremnts.txt to the version after renku init, basically trying to restore them back after being overwritten by renku init. 2025-06-04 14:57:24 +02:00
19f4e6a0f0 renku init
renku-transaction: b204f31a23ed480b9323904a193047db
2025-06-04 14:52:49 +02:00
14c41ce76d Prepare gitrepo for renku init. Remove data/ from .gitignore and Rename Dockerfile by Dockerfile.ascmchain to avoid conflicts with renku. 2025-06-04 14:49:22 +02:00
a4847f0071 Renamed Dockerfile to avoid conflicts with project rekurization/init 2025-06-04 14:10:24 +02:00
effd5b865e Replace nonoperation reviewPannel in app/data_flagging_app.py with date range picker. Cached time column to speed up figure update but it doesnot look there was much improvement. 2025-06-04 14:03:45 +02:00
da6884ef21 Fix bug in app/data_flagging_app.py. This is a TODO/BUG [from Leïla] Correct error when flags are loaded in the app. 2025-06-04 10:47:48 +02:00
c15aa4e828 Merge pull request 'WIP.new_changes_leila' (#1) from new_changes_leila into main
Reviewed-on: APOG/acsmnode#1
2025-06-04 09:35:31 +02:00
fc6f6708b8 Merge branch 'main' into new_changes_leila 2025-06-04 09:34:12 +02:00
8afa2f98d1 Update notebooks/acsm_pipeline.ipynb. Step 5.2: added all species for the new uncertainty 2025-05-28 11:51:36 +02:00
3a23db1a12 Update TODO.md. Added some todos and deleted one that is done now. 2025-05-28 11:48:26 +02:00
196e237838 Update pipelines/steps/utils.py. Changes uncertainty_estimate 2025-05-28 08:48:38 +02:00
ddfa1273af update dima to latest version. 2025-05-27 10:14:02 +02:00
a730368678 Add step to adjust uncertainties 2025-05-27 10:03:03 +02:00
f3f830487e Extend pipelines/steps/adjust_uncertainty_column_in_nas_file.py to handle list of variables. 2025-05-27 09:53:12 +02:00
38fe2b8774 Update data chain notebook with step to adjust uncertainties 2025-05-26 20:00:31 +02:00
08ba10dc48 Implement new step pipelines/steps/adjust_uncertainty_column_in_nas_file.py. 2025-05-26 19:50:18 +02:00
b1b8b426fc Update dima to latest version 2025-05-26 19:42:57 +02:00
59489c611f Add cell and comment to manually choose data dirs to analize 2025-05-26 13:33:50 +02:00
44a696e52f Change submodule url from gitlab to gitea 2025-05-26 13:18:51 +02:00
989e99078a Merge branch 'main' of https://gitlab.psi.ch/apog/acsmnode
This updates todo.md
2025-05-26 13:12:52 +02:00
52fdb7a8ad Fix number of variables by subtracting one. Start_time is now excluded from count. 2025-05-26 13:12:40 +02:00
e8327f7bd7 Merge branch 'changes/leila' into 'main'
Changes/leila

See merge request apog/acsmnode!7
2025-05-26 13:09:55 +02:00
f8ee5b1ce4 Added a todo 2025-05-26 11:59:56 +02:00
e22321f823 Updated to do list 2025-05-21 18:59:19 +02:00
7a0ce95848 Changed the originator address 2025-05-21 17:22:09 +02:00
f7e1c31550 added len(interpolated_cpc) 2025-05-21 16:35:50 +02:00
a7faf69c96 Changed missing value code generator, any number greater than the largest possible one that can be represented in terms of 9s is capped 2025-05-21 15:17:25 +02:00
ce776610f6 Add new step to remove inletP or in general a column from nas file 2025-05-21 09:49:05 +02:00
e39c23bbad Update generate_flags.py to skip checking for cpc flags when not available 2025-05-21 09:48:19 +02:00
01769f10e0 Implement new step to remove column from already created nas file. 2025-05-21 09:43:36 +02:00
f880b0f1ba Updated dima to latest version 2025-05-21 09:27:50 +02:00
e87ff83c66 Merge branch 'leila_more_modifications' into 'main'
Changed name of originator and submitter in file campaignDescriptor.yaml

See merge request apog/acsmnode!6
2025-05-21 09:22:43 +02:00
c181e7abad Update file campaignDescriptor.yaml 2025-05-20 17:32:43 +02:00
727256cb46 Merge branch 'leila_modifications' into 'main'
Added limits on y axis for flags visualization

See merge request apog/acsmnode!5
2025-05-20 17:28:45 +02:00
a9461cb1aa Added limits on y axis for flags visualization 2025-05-20 16:27:11 +02:00
e4d87080bc Enable all flaggs for use in flagging app and display them in order according to their ranking (see app/flags/ebas_dict.yaml) 2025-05-19 17:10:16 +02:00
ccd4740dba Merge branch 'todos_update' into 'main'
Todos update

See merge request apog/acsmnode!4
2025-05-16 14:31:48 +02:00
cc1b445d38 Implement binary flags for visualization purposes, and fix bug with cpc flags. 2025-05-16 14:22:17 +02:00
78d5c22dc3 Flag from diagnostics (456) should override other flags like CPC (652, 460) 2025-05-15 16:03:08 +02:00
58d7b425aa Add generate cpc flags pipelines/steps/generate_flags.py 2025-05-15 15:01:11 +02:00
23ee4c412b Update dima to latest version 2025-05-15 14:58:24 +02:00
9915538442 Update dima submodule to point to dima remote on Gitea.psi.ch 2025-05-14 10:15:37 +02:00
fb3e3904bd Remove defaults channel from conda source channels 2025-05-13 12:50:33 +02:00
37671a3685 update pipelines/steps/visualize_datatable_vars.py with interactive plots and refactor dependent jupyter nb accordingly 2025-05-13 11:32:46 +02:00
e152c9eefd Update file TODO.md 2025-05-12 14:38:39 +02:00
0e642d4b9b Update file TODO.md 2025-05-08 11:19:59 +02:00
1c0a4631aa Update file TODO.md 2025-05-08 09:20:06 +02:00
ae107acea8 Update file TODO.md 2025-04-11 14:54:35 +02:00
5a54a22ebd Update after run with PAY dataset. 2025-04-11 11:31:35 +02:00
0353c8492b Added data chain step. This step updates the current parameters with new input folder params 2025-04-11 11:23:04 +02:00