Commit Graph

212 Commits

Author SHA1 Message Date
d95a08caaa Implemented partially validation of group hierarchy input param. It needs to be extended to deeper group hierarchies and perhaps output nonconforming lowerlevel groups. 2023-10-20 16:56:27 +02:00
7eb1686d1f Modified creat_hdf5_file to admit group_by_list of functions that will be used to create group hierarchy. 2023-10-19 16:57:33 +02:00
7ff1d8d09b Implemented package to interface openbis with python and upload hdf5 file data from Thorsten data into openbis. 2023-10-18 17:00:01 +02:00
54ac1d5463 Modified to find input data inside newly added input_files folder. 2023-10-10 09:02:45 +02:00
0248ca3c6e Added a new function read_hdf5_as_dataframe_v2 which supports hdf5 files without datasets and replaced the dataframe construction procedure to a column wise basis. 2023-10-10 09:00:41 +02:00
d42ddd6ff0 Removed Filelist.h5, which is now relocated in input_files folder 2023-10-10 08:52:32 +02:00
736f0ba915 Added folders input_files and logs to store input data (hdf5 files) and resulting logs. 2023-10-10 08:51:10 +02:00
9bce95663c Reran jupyter notebook. 2023-08-22 15:11:25 +02:00
ebf41763df Reran jupyter notebook. 2023-08-22 15:09:59 +02:00
e3225fff4b Reduced a few lines of code and documented plot_spectra function. 2023-08-22 15:09:18 +02:00
3e9a26f147 Initial commit. hdf5_lib.py contains functions to read hdf5 file as dataframe. and napp_plotlib contains functions to plot image and spectra. jupyter notebook included to illustrate functions. 2023-08-22 14:28:27 +02:00
8c4851ffea Initial commit 2023-08-22 14:22:31 +02:00