Commit Graph

198 Commits

Author SHA1 Message Date
34fb1be71f updated readme and reader to handle ignore ascii character errors 2024-05-24 15:55:15 +02:00
7633816c23 Deleted output no longer returned in data integration pipeline 2024-05-24 14:55:08 +02:00
55d3a2c92b Updated readme file 2024-05-24 11:56:30 +02:00
8315f8991b Updated configuration file organization and workflow description. 2024-05-24 11:15:05 +02:00
8cff0d6f74 Commented out openia python module. 2024-05-24 10:54:15 +02:00
e278cde961 Added bottom level instrument metadata descriptions such as units and description. 2024-05-24 09:50:25 +02:00
1c39986503 Removed yaml file output from data integration file. The creation of this file is being outsource to data store repo 2024-05-24 09:32:30 +02:00
292708e745 Removed creation of yaml file subsequent to data integration. This can cause misalignment with data store. I think the yaml snapshot of a hdf5 file should therefore be outsourced there. 2024-05-24 09:30:24 +02:00
c4f12eaa84 Made a few optimizations to code and documentation. Expressions relying on list comprehensions were simplified with generator expressions. ex,: any([keyword in filename for keyword in select_file_keywords]) was simplified to any(keyword in filename for keyword in select_file_keywords). 2024-05-24 09:06:07 +02:00
9c311342d8 Replaced attribute table_header in Lopap configuration file with a shorter version which is consistent accross more files. Some of the headers might change. 2024-05-24 08:55:36 +02:00
67a52ab00a Optimzed and included df to np structured array conversion. \n-Replaced loop plus append with list comprehension. \n-Replaced pd df column concatenation based on row-wise concatenation with df.aggr() method that uses column wise concatenation. 2024-05-23 22:20:19 +02:00
993db5d783 Optimzed and included df to np structured array conversion. \n-Replaced loop plus append with list comprehension. \n-Replaced pd df column concatenation based on row-wise concatenation with df.aggr() method that uses column wise concatenation. 2024-05-23 22:18:37 +02:00
e4b9487575 Replaced commented lines by accurate comments 2024-05-22 20:15:17 +02:00
7c1c0bf33c Simplified code by updating HDF5 attributes using .update() dict method (inherited from dict type). 2024-05-22 20:11:54 +02:00
83de18989f Added feature to interpret links to description in the yaml intrument configuration file and added them at the dataset level as attributes. 2024-05-09 19:17:08 +02:00
e8a13dba20 Added link to descriptions and units of table variables/or columns. These can be used as attributes of datasets from tabular data 2024-05-09 19:15:20 +02:00
6d1b7545e5 Included timestamp specification, which indicates column names in a list that contain datetime information. 2024-04-30 14:51:58 +02:00
67765d53f0 Incorparated feature to merge data and time data which may originally be in separate columns in text source files. This is specified in the text source specification yaml file 2024-04-30 14:50:33 +02:00
fee72bbda6 Performed edits to README.md 2024-04-26 14:33:41 +02:00
faef7db666 Updated readme file with instructions on how to set compound attributes and delete them. 2024-04-26 14:27:01 +02:00
7441d63cd3 Removed unecessary pygit depenedency and associated function that relied on it. 2024-04-26 13:15:33 +02:00
b344a4045f Cleared out jupyter notebook. 2024-04-26 13:09:41 +02:00
9552bfead2 Included new delete attribute and restart review features. 2024-04-26 13:08:27 +02:00
94d717f9db Corrected parsing problem from hdf5 to yaml attribute. Single element arrays are now represented as a scalar as opposed to a list with a single element. 2024-04-26 12:54:41 +02:00
5c4be34ac2 Updated hdf5 file with yaml review file. 2024-04-26 11:30:09 +02:00
9e951c051c Submitted metadata review. 2024-04-26 11:30:05 +02:00
1975cde356 Updated hdf5 file with yaml review file. 2024-04-26 11:28:58 +02:00
08a64eb354 Updated hdf5 file with yaml review file. 2024-04-26 11:07:58 +02:00
1bfa19c63f Submitted metadata review. 2024-04-26 11:07:42 +02:00
70ccc9e56d Initialized metadata review. 2024-04-26 10:56:32 +02:00
657269a2ef Updated hdf5 file with yaml review file. 2024-04-25 16:56:12 +02:00
63b102bae9 Submitted metadata review. 2024-04-25 16:56:06 +02:00
e8409389da Updated hdf5 file with yaml review file. 2024-04-25 16:49:51 +02:00
d0c0014a7d Submitted metadata review. 2024-04-25 16:47:44 +02:00
08bf5bc27f Initialized metadata review. 2024-04-25 16:45:20 +02:00
836fe45fa0 Submitted metadata review. 2024-04-25 16:31:15 +02:00
8303f2948f Submitted metadata review. 2024-04-25 14:39:38 +02:00
56ccd681ba Submitted metadata review. 2024-04-25 13:25:14 +02:00
f7c410a0ac Submitted metadata review. 2024-04-25 13:20:22 +02:00
162d0be274 Merge branch 'review_ThorstenBR' 2024-04-25 09:06:03 +02:00
c2343afe38 Submitted metadata review. 2024-04-25 09:00:26 +02:00
3c6440977f Implemented delete attribute feature and corrected yaml display of compound attributes 2024-04-25 08:58:29 +02:00
4f15c3b684 Submitted metadata review. 2024-04-24 18:18:54 +02:00
f55431064e Initialized metadata review. 2024-04-24 18:12:21 +02:00
6869d799cd Simplified branch naming 2024-04-24 17:26:08 +02:00
4663ed10e2 Fixed branch naming problem 2024-04-24 17:21:44 +02:00
cf2431d4c3 Included created_at() function 2024-04-24 17:16:59 +02:00
508266132e Deleted config_file.py 2024-04-24 17:16:30 +02:00
be02ad01ed Removed problematic lines, which depended on soon to be removed dependency config_file.py 2024-04-24 17:14:13 +02:00
6260e7da3c Redefined name of review branch as review:<review's name> 2024-04-24 17:09:38 +02:00