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Deleted metadata_review_workflow.py and turned it into a jupyter notebook.

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florez_j
2024-03-28 13:10:42 +01:00
parent 438ac4d24d
commit f0af30f7e8
2 changed files with 4 additions and 38 deletions
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README.md
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Python library to work with XPS data campaigns, encoded in HDF5 files.
## TODO
* Talk to Thorsten about rga txt files. Example folder contains incosistent rga txt files, there is no unique column separator (, or )
## Getting started
To make it easy for you to get started with GitLab, here's a list of recommended next steps.

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metadata_review_workflow.py
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import sys
import os
root_dir = os.path.abspath(os.curdir)
sys.path.append(root_dir)
import src.metadata_review_lib as metadata_review_lib
import input_files.config_file as config_file
import src.hdf5_vis as hdf5_vis
import src.hdf5_lib as hdf5_lib
import os
output_filename_path = "output_files/unified_file_smog_chamber_2024-03-25_UTC-OFST_+0100_NG.h5"
output_yml_filename_path = "output_files/unified_file_smog_chamber_2024-03-25_UTC-OFST_+0100_NG.yaml"
output_filename_path, output_yml_filename_path = hdf5_lib.main()
try:
metadata_review_lib.first_initialize_metadata_review(output_filename_path,initials='NG')
except Warning as ex:
print(ex)
#
submit_review = True
if submit_review:
metadata_review_lib.second_submit_metadata_review(output_filename_path,initials='NG')
output_yml_filename_path_tail, filename = os.path.split(output_yml_filename_path)
if os.path.exists(os.path.join(os.path.join(os.path.abspath(os.curdir),"review"),filename)):
metadata_review_lib.third_update_hdf5_file_with_review(output_filename_path, os.path.join(os.path.join(os.path.abspath(os.curdir),"review"),filename))
metadata_review_lib.fourth_complete_metadata_review()
#if __name__ == '__main__':