Moved make_file_copy internal function to g5505_utils.py module because it can be reused accross file readers.

src/g5505_file_reader.py

@@ -11,6 +11,7 @@ import os
 import tempfile
 import shutil
 import h5py
+import g5505_utils as utils
 
 ROOT_DIR = os.path.abspath(os.curdir)
 
@@ -63,38 +64,13 @@ def read_xps_ibw_file_as_dict(filename):
 
     return file_dict
 
-def make_file_copy(source_file_path):
-
-    pathtail, filename = os.path.split(source_file_path)
-    backup_filename = 'backup_'+ filename
-    # Path                     
-    ROOT_DIR = os.path.abspath(os.curdir)
-
-    tmp_dirpath = os.path.join(ROOT_DIR,'tmp_files')
-    if not os.path.exists(tmp_dirpath):
-        os.mkdir(tmp_dirpath)
-
-    tmp_file_path = os.path.join(tmp_dirpath,backup_filename)
-    shutil.copy(source_file_path, tmp_file_path)
-
-    return tmp_file_path
-
 def copy_file_in_group(source_file_path, dest_file_obj : h5py.File, dest_group_name):
     # Create copy of original file to avoid possible file corruption and work with it.
 
-    pathtail, filename = os.path.split(source_file_path)
-    backup_filename = 'backup_'+ filename
-    # Path                     
-    ROOT_DIR = os.path.abspath(os.curdir)
+    tmp_file_path = utils.make_file_copy(source_file_path)
 
-    tmp_dirpath = os.path.join(ROOT_DIR,'tmp_files')
-    if not os.path.exists(tmp_dirpath):
-        os.mkdir(tmp_dirpath)
-
-    tmp_file_path = os.path.join(tmp_dirpath,backup_filename)
-    shutil.copy(source_file_path, tmp_file_path)
     # Open backup h5 file and copy complet filesystem directory onto a group in h5file
-    with h5py.File(os.path.join(tmp_dirpath,backup_filename),'r') as src_file:
+    with h5py.File(tmp_file_path,'r') as src_file:
         dest_file_obj.copy(source= src_file['/'], dest= dest_group_name)
 
     if 'tmp_files' in tmp_file_path:
@@ -131,9 +107,9 @@ def read_txt_files_as_dict(filename : str ):
     header_dict = {}
     data_start = False    
     # Work with copy of the file for safety
-    tmp_filename = make_file_copy(filename)
+    tmp_filename = utils.make_file_copy(source_file_path=filename)
 
-    with open(filename,'r') as f:
+    with open(tmp_filename,'r') as f:
         file_encoding = f.encoding
         table_preamble = ""
         for line_number, line in enumerate(f):