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metafile *.cami #32

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opened 2021-06-28 16:31:34 +02:00 by usov_i · 7 comments
usov_i commented 2021-06-28 16:31:34 +02:00 (Migrated from gitlab.psi.ch)
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Created by: zaharko

I write here entries from cami file which could be sometimes rewritten to perform correct calculations in pyzebra or any other new software working with zebra hdf files:

  • I suggest to give path in 'rootpath' and in 'filelist' only the filenames
#begin rootpath
/afs/psi.ch/project/sinqdata/2021/zebra/20211324/
#end rootpath
#begin filelist
zebra2021n002539.hdf
zebra2021n002540.hdf
#end
  • dist1 is located in /entry1/ZEBRA/SINQ/area_detector/distance
#begin detector parameters
dist1=538
#end
  • zebra_mode=nb or bi is located in /entry1/zebra_mode
    if the mode is nb the angles chi and phi should be nullified chi=0, phi=0
    chi and phi are located in /entry1/sample
#begin zebra_mode
nb
#end
  • name, UB, cell h,k,l, is located in /entry1/sample
    cell (6 entries) are located in hdf file or rewritten from here should be used in spind (now spind uses a dummy default)
    lambda is located in /entry1/ZEBRA/monochromator/wavelength
#begin crystal
name=CePdIn
UB=-0.148595,-0.0572272,0.013334,-0.0205403,-0.138141,-0.0292135,0.0055983,-0.0132632,0.246737
cell=  7.073600 7.073600 4.019000 90. 90. 90.
lambda=1.178
#end
*Created by: zaharko* I write here entries from cami file which could be sometimes rewritten to perform correct calculations in pyzebra or any other new software working with zebra hdf files: * I suggest to give path in 'rootpath' and in 'filelist' only the filenames ``` #begin rootpath /afs/psi.ch/project/sinqdata/2021/zebra/20211324/ #end rootpath #begin filelist zebra2021n002539.hdf zebra2021n002540.hdf #end ``` * dist1 is located in /entry1/ZEBRA/SINQ/area_detector/distance ``` #begin detector parameters dist1=538 #end ``` * zebra_mode=nb or bi is located in /entry1/zebra_mode if the mode is nb the angles chi and phi should be nullified chi=0, phi=0 chi and phi are located in /entry1/sample ``` #begin zebra_mode nb #end ``` * name, UB, cell h,k,l, is located in /entry1/sample cell (6 entries) are located in hdf file or rewritten from here should be used in spind (now spind uses a dummy default) lambda is located in /entry1/ZEBRA/monochromator/wavelength ``` #begin crystal name=CePdIn UB=-0.148595,-0.0572272,0.013334,-0.0205403,-0.138141,-0.0292135,0.0055983,-0.0132632,0.246737 cell= 7.073600 7.073600 4.019000 90. 90. 90. lambda=1.178 #end ```
usov_i commented 2021-06-29 10:56:25 +02:00 (Migrated from gitlab.psi.ch)
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Created by: ivan-usov

Changed from

#zebra_mode
nb
#zebra_mode

to

#begin zebra_mode
nb
#end

which is consistent with the rest of .cami specs

*Created by: ivan-usov* Changed from ``` #zebra_mode nb #zebra_mode ``` to ``` #begin zebra_mode nb #end ``` which is consistent with the rest of .cami specs
usov_i commented 2021-06-29 11:06:57 +02:00 (Migrated from gitlab.psi.ch)
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Created by: ivan-usov

I would suggest to keep rootpath and filelist as they were before, otherwise one would need to modify all old .cami files

*Created by: ivan-usov* I would suggest to keep `rootpath` and `filelist` as they were before, otherwise one would need to modify all old .cami files
usov_i commented 2021-06-29 11:36:13 +02:00 (Migrated from gitlab.psi.ch)
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Created by: ivan-usov

Is it dist1 or dist2? And I believe the path in hdf is /entry1/ZEBRA/area_detector2/distance, is it correct?

*Created by: ivan-usov* Is it `dist1` or `dist2`? And I believe the path in hdf is `/entry1/ZEBRA/area_detector2/distance`, is it correct?
usov_i commented 2021-06-29 11:44:33 +02:00 (Migrated from gitlab.psi.ch)
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Created by: ivan-usov

I would suggest to either separate cell values with commas, or separate UB values with spaces, so that both are consistent

*Created by: ivan-usov* I would suggest to either separate `cell` values with commas, or separate `UB` values with spaces, so that both are consistent
usov_i commented 2021-06-29 12:08:11 +02:00 (Migrated from gitlab.psi.ch)
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Created by: zaharko

Ivan,

I am personally for no commas,
But the old software uses UB input with commas
Therefore I suggest to have presently commas in cell parameters and UB.

Oksana

On 29 Jun 2021, at 11:44, Ivan Usov @.@.>> wrote:

I would suggest to either separate cell values with commas, or separate UB values with spaces, so that both are consistent

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*Created by: zaharko* Ivan, I am personally for no commas, But the old software uses UB input with commas Therefore I suggest to have presently commas in cell parameters and UB. Oksana On 29 Jun 2021, at 11:44, Ivan Usov ***@***.******@***.***>> wrote: I would suggest to either separate cell values with commas, or separate UB values with spaces, so that both are consistent — You are receiving this because you authored the thread. Reply to this email directly, view it on GitHub<https://github.com/paulscherrerinstitute/pyzebra/issues/32#issuecomment-870445331>, or unsubscribe<https://github.com/notifications/unsubscribe-auth/AMBMFVDFOFRZPMIYSXW7V2LTVGIZJANCNFSM47ODBKJA>. [ { ***@***.***": "http://schema.org", ***@***.***": "EmailMessage", "potentialAction": { ***@***.***": "ViewAction", "target": "https://github.com/paulscherrerinstitute/pyzebra/issues/32#issuecomment-870445331", "url": "https://github.com/paulscherrerinstitute/pyzebra/issues/32#issuecomment-870445331", "name": "View Issue" }, "description": "View this Issue on GitHub", "publisher": { ***@***.***": "Organization", "name": "GitHub", "url": "https://github.com" } } ]
usov_i commented 2021-06-29 12:21:50 +02:00 (Migrated from gitlab.psi.ch)
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Created by: zaharko

I do not know should it be dist1 or dist2
How should we number them?
Dist1 for 1d detector
Dist2 for 2D detector?

You are right, the distance for the area detector is saved in
entry1/ZEBRA/area_detector2/distance

On 29 Jun 2021, at 11:36, Ivan Usov @.@.>> wrote:

Is it dist1 or dist2? And I believe the path in hdf is /entry1/ZEBRA/area_detector2/distance, is it correct?

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*Created by: zaharko* I do not know should it be dist1 or dist2 How should we number them? Dist1 for 1d detector Dist2 for 2D detector? You are right, the distance for the area detector is saved in entry1/ZEBRA/area_detector2/distance On 29 Jun 2021, at 11:36, Ivan Usov ***@***.******@***.***>> wrote: Is it dist1 or dist2? And I believe the path in hdf is /entry1/ZEBRA/area_detector2/distance, is it correct? — You are receiving this because you authored the thread. Reply to this email directly, view it on GitHub<https://github.com/paulscherrerinstitute/pyzebra/issues/32#issuecomment-870439866>, or unsubscribe<https://github.com/notifications/unsubscribe-auth/AMBMFVBMTSYQMER3BTA3PTLTVGHZPANCNFSM47ODBKJA>. [ { ***@***.***": "http://schema.org", ***@***.***": "EmailMessage", "potentialAction": { ***@***.***": "ViewAction", "target": "https://github.com/paulscherrerinstitute/pyzebra/issues/32#issuecomment-870439866", "url": "https://github.com/paulscherrerinstitute/pyzebra/issues/32#issuecomment-870439866", "name": "View Issue" }, "description": "View this Issue on GitHub", "publisher": { ***@***.***": "Organization", "name": "GitHub", "url": "https://github.com" } } ]
usov_i commented 2021-06-29 13:16:44 +02:00 (Migrated from gitlab.psi.ch)
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Created by: ivan-usov

OK, i'll go with dist1 for now, and I don't have any strong opinion about the naming for the actual devices.

*Created by: ivan-usov* OK, i'll go with `dist1` for now, and I don't have any strong opinion about the naming for the actual devices.
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Reference: zebra/pyzebra#32