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Z changed cami into h5meta

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This commit is contained in:
zaharko 2020-03-18 09:20:07 +01:00
parent 5c32478104
commit f75d6c2f31
2 changed files with 20 additions and 20 deletions
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6
pyzebra/app.py
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@ -50,14 +50,14 @@ filelist.on_change("value", filelist_callback)
def fileinput_callback(_attr, _old, new):
cami_list = pyzebra.read_cami(new)
file_list = cami_list["filelist"]
h5meta_list = pyzebra.read_h5meta(new)
file_list = h5meta_list["filelist"]
filelist.menu = file_list
fileinput = TextInput()
fileinput.on_change("value", fileinput_callback)
#fileinput.value = "/home/usov_i/psi-projects/sinq/data/1.cami"
fileinput.value = "/Users/zaharko/1work/ZeBRa/ZebraSoftware/python_for_zebra/hdfdata/1.cami"
def index_spinner_callback(_attr, _old, new):

34
pyzebra/zebra.py
View File

@ -1,32 +1,32 @@
import h5py
def read_cami(filepath):
"""Read and parse content of a cami file.
def read_h5meta(filepath):
"""Read and parse content of a h5meta file.
Args:
filepath (str): File path of a cami file.
filepath (str): File path of a h5meta file.
Returns:
dict: A dictionary with section names and their content.
"""
cami_content = dict()
with open(filepath, "r") as cami_file:
line = cami_file.readline()
h5meta_content = dict()
with open(filepath, "r") as h5meta_file:
line = h5meta_file.readline()
while line:
if line.startswith("#begin"):
# read section
section = line[7:-1] # len("#begin ") = 7
cami_content[section] = []
line = cami_file.readline()
h5meta_content[section] = []
line = h5meta_file.readline()
while not line.startswith("#end"):
cami_content[section].append(line[:-1])
line = cami_file.readline()
h5meta_content[section].append(line[:-1])
line = h5meta_file.readline()
# read next line after section's end
line = cami_file.readline()
line = h5meta_file.readline()
return cami_content
return h5meta_content
def read_detector_data(filepath):
@ -48,18 +48,18 @@ def read_detector_data(filepath):
return detector_data
def open_cami(filepath):
"""Open cami scan (?)
def open_h5meta(filepath):
"""Open h5meta file
Args:
filepath (str): File path of a cami file.
filepath (str): File path of a h5meta file.
Returns:
dict: A dictionary with h5 names and their detector data.
"""
data = dict()
cami_content = read_cami(filepath)
for file in cami_content["filelist"]:
h5meta_content = read_h5meta(filepath)
for file in h5meta_content["filelist"]:
data[file] = read_detector_data(file)
return data