From d6202d4a6b7662e9c654323d917cd48bc881661c Mon Sep 17 00:00:00 2001 From: Ivan Usov Date: Thu, 10 Dec 2020 22:07:04 +0100 Subject: [PATCH] Use pyzebra lib default anatric location --- pyzebra/app/cli.py | 2 +- pyzebra/app/panel_hdf_anatric.py | 5 ++++- 2 files changed, 5 insertions(+), 2 deletions(-) diff --git a/pyzebra/app/cli.py b/pyzebra/app/cli.py index bef6bb5..464ace9 100644 --- a/pyzebra/app/cli.py +++ b/pyzebra/app/cli.py @@ -40,7 +40,7 @@ def main(): parser.add_argument( "--anatric-path", type=str, - default="/afs/psi.ch/project/sinq/rhel7/bin/anatric", + default=None, help="path to anatric executable", ) diff --git a/pyzebra/app/panel_hdf_anatric.py b/pyzebra/app/panel_hdf_anatric.py index cd06614..43457b9 100644 --- a/pyzebra/app/panel_hdf_anatric.py +++ b/pyzebra/app/panel_hdf_anatric.py @@ -346,7 +346,10 @@ def create(): with tempfile.TemporaryDirectory() as temp_dir: temp_file = temp_dir + "/temp.xml" config.save_as(temp_file) - pyzebra.anatric(temp_file, anatric_path=doc.anatric_path) + if doc.anatric_path: + pyzebra.anatric(temp_file, anatric_path=doc.anatric_path) + else: + pyzebra.anatric(temp_file) with open(config.logfile) as f_log: output_log.value = f_log.read()