Files
eos/tests/test_full_analysis.py

120 lines
5.1 KiB
Python

import os
import cProfile
from unittest import TestCase
from dataclasses import fields, MISSING
from eos import options, reduction_reflectivity, logconfig
logconfig.setup_logging()
logconfig.update_loglevel(1)
# TODO: add unit tests for individual parts of reduction
class FullAmorTest(TestCase):
@classmethod
def setUpClass(cls):
# generate map for option defaults
cls._field_defaults = {}
for opt in [options.ExperimentConfig, options.ReflectivityReductionConfig, options.ReflectivityOutputConfig]:
defaults = {}
for field in fields(opt):
if field.default not in [None, MISSING]:
defaults[field.name] = field.default
elif field.default_factory not in [None, MISSING]:
defaults[field.name] = field.default_factory()
cls._field_defaults[opt.__name__] = defaults
cls.pr = cProfile.Profile()
@classmethod
def tearDownClass(cls):
cls.pr.dump_stats("profile_test.prof")
def setUp(self):
self.pr.enable()
self.reader_config = options.ReaderConfig(
year=2025,
rawPath=["test_data"],
)
def tearDown(self):
self.pr.disable()
for fi in ['test_results/test.Rqz.ort', 'test_results/5952.norm']:
try:
os.unlink(fi)
except FileNotFoundError:
pass
def test_time_slicing(self):
experiment_config = options.ExperimentConfig(
chopperSpeed=self._field_defaults['ExperimentConfig']['chopperSpeed'],
chopperPhase=-13.5,
chopperPhaseOffset=-5,
monitorType=self._field_defaults['ExperimentConfig']['monitorType'],
lowCurrentThreshold=self._field_defaults['ExperimentConfig']['lowCurrentThreshold'],
yRange=(18, 48),
lambdaRange=(3., 11.5),
incidentAngle=self._field_defaults['ExperimentConfig']['incidentAngle'],
mu=0,
nu=0,
muOffset=0.0,
sampleModel='air | 10 H2O | D2O'
)
reduction_config = options.ReflectivityReductionConfig(
normalisationMethod=self._field_defaults['ReflectivityReductionConfig']['normalisationMethod'],
qResolution=0.01,
qzRange=self._field_defaults['ReflectivityReductionConfig']['qzRange'],
thetaRange=(-0.75, 0.75),
fileIdentifier=["6003-6005"],
scale=[1],
normalisationFileIdentifier=[],
timeSlize=[300.0]
)
output_config = options.ReflectivityOutputConfig(
outputFormats=[options.OutputFomatOption.Rqz_ort],
outputName='test',
outputPath='test_results',
)
config=options.ReflectivityConfig(self.reader_config, experiment_config, reduction_config, output_config)
# run three times to get similar timing to noslicing runs
reducer = reduction_reflectivity.ReflectivityReduction(config)
reducer.reduce()
reducer = reduction_reflectivity.ReflectivityReduction(config)
reducer.reduce()
reducer = reduction_reflectivity.ReflectivityReduction(config)
reducer.reduce()
def test_noslicing(self):
experiment_config = options.ExperimentConfig(
chopperSpeed=self._field_defaults['ExperimentConfig']['chopperSpeed'],
chopperPhase=-13.5,
chopperPhaseOffset=-5,
monitorType=self._field_defaults['ExperimentConfig']['monitorType'],
lowCurrentThreshold=self._field_defaults['ExperimentConfig']['lowCurrentThreshold'],
yRange=(18, 48),
lambdaRange=(3., 11.5),
incidentAngle=self._field_defaults['ExperimentConfig']['incidentAngle'],
mu=0,
nu=0,
muOffset=0.0,
)
reduction_config = options.ReflectivityReductionConfig(
normalisationMethod=self._field_defaults['ReflectivityReductionConfig']['normalisationMethod'],
qResolution=0.01,
qzRange=self._field_defaults['ReflectivityReductionConfig']['qzRange'],
thetaRange=(-0.75, 0.75),
fileIdentifier=["6003", "6004", "6005"],
scale=[1],
normalisationFileIdentifier=["5952"],
autoscale=(0.0, 0.05),
)
output_config = options.ReflectivityOutputConfig(
outputFormats=[options.OutputFomatOption.Rqz_ort],
outputName='test',
outputPath='test_results',
)
config=options.ReflectivityConfig(self.reader_config, experiment_config, reduction_config, output_config)
reducer = reduction_reflectivity.ReflectivityReduction(config)
reducer.reduce()
# run second time to reuse norm file
reducer = reduction_reflectivity.ReflectivityReduction(config)
reducer.reduce()