#!/usr/bin/python import pandas as pd import regex as re import argparse import os, sys from datetime import datetime date = datetime.today().strftime('%y%m%d') def calculate_new_corner_positions( beam_x, beam_y ): # make df of current corner positions positions = { "current_x" : [ 607, 1646, 607, 1646, 607, 1646, 538, 1577, 538, 1577, 538, 1577, 538, 3212, 514, 3143 ], "current_y" : [ 0, 69, 550, 619, 1100, 1169, 1650, 1719, 2200, 2269, 2750, 2819, 597, 667, 1636, 1706 ] } corner_df = pd.DataFrame( positions ) # calculate new corner positions corner_df[ "new_x" ] = corner_df.current_x.subtract( beam_x ) corner_df[ "new_y" ] = corner_df.current_y.subtract( beam_y ) # drop old positions corner_df = corner_df[[ "new_x", "new_y" ]] return corner_df def write_new_positions( path_to_geom, beam_x, beam_y, clen, energy ): # open current geometry file current_geom_file = open( path_to_geom, "r" ).read() # calculate new corner positions corner_df = calculate_new_corner_positions( beam_x, beam_y ) # replace current corner positions with new ones for i in range(0, 16): # x and y positions new_x, new_y = round( corner_df.new_x[i], 3 ), round( corner_df.new_y[i], 3 ) # input new x position current_pattern_x = r"p" + re.escape( str(i) ) + r"/corner_x = -?\d+\.\d+" new_pattern_x = r"p" + re.escape( str(i) ) + r"/corner_x = " + str( new_x ) current_geom_file = re.sub( current_pattern_x, new_pattern_x, current_geom_file ) # input new y position current_pattern_y = r"p" + re.escape( str(i) ) + r"/corner_y = -?\d+\.\d+" new_pattern_y = r"p" + re.escape( str(i) ) + r"/corner_y = " + str( new_y ) current_geom_file = re.sub( current_pattern_y, new_pattern_y, current_geom_file ) # input new clen current_clen = r"clen = \d\.\d+" new_clen = r"clen = " + str( clen ) current_geom_file = re.sub( current_clen, new_clen, current_geom_file ) # input new energy current_energy = r"photon_energy = \d+" new_energy = r"photon_energy = " + str( energy ) current_geom_file = re.sub( current_energy, new_energy, current_geom_file ) # create geom new file geom_start = path_to_geom[:-5] new_geom_name = "{0}_{1}.geom".format( geom_start, date ) # write new geom file f = open( new_geom_name, "w" ) f.write( current_geom_file ) f.close() if __name__ == "__main__": parser = argparse.ArgumentParser() parser.add_argument( "-p", "--path_to_geom", help="give the path to the cristallina 8M geom file to be updated", type=str, default="/sf/cristallina/data/p20558/work/geom/optimised_geom_file/p20558_hewl_op.geom", ) parser.add_argument( "-x", "--beam_x", help="beam_x in pixels", type=float, default=1603.73 ) parser.add_argument( "-y", "--beam_y", help="beam_y in pixels", type=float, default=1661.99 ) parser.add_argument( "-c", "--clen", help="detector distance in m", type=int, default=0.111 ) parser.add_argument( "-e", "--energy", help="photon energy", type=int, default=12400 ) args = parser.parse_args() # run geom converter write_new_positions( args.path_to_geom, args.beam_x, args.beam_y, args.clen, args.energy )