add p-group to output geom name, now uses default geom file from crmx-tools
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@@ -57,7 +57,7 @@ def scrub_poni( path_to_poni_file ):
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return poni1_p, poni2_p, eV, round( float( clen )*1000, 5 )
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return poni1_p, poni2_p, eV, round( float( clen )*1000, 5 )
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def write_new_positions( path_to_geom, beam_x, beam_y, clen, energy ):
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def write_new_positions( path_to_geom, beam_x, beam_y, clen, energy, p_group ):
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# open current geometry file
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# open current geometry file
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current_geom_file = open( path_to_geom, "r" ).read()
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current_geom_file = open( path_to_geom, "r" ).read()
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@@ -93,7 +93,7 @@ def write_new_positions( path_to_geom, beam_x, beam_y, clen, energy ):
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# create geom new file
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# create geom new file
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geom_start = path_to_geom[:-5]
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geom_start = path_to_geom[:-5]
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new_geom_name = "{0}_{1}.geom".format( geom_start, date )
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new_geom_name = "crmx8M_{0}_{1}.geom".format( p_group, date )
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# write new geom file
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# write new geom file
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f = open( new_geom_name, "w" )
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f = open( new_geom_name, "w" )
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@@ -111,7 +111,7 @@ if __name__ == "__main__":
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"--geom",
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"--geom",
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help="give the path to the cristallina 8M geom file to be updated",
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help="give the path to the cristallina 8M geom file to be updated",
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type=str,
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type=str,
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default="/sf/cristallina/data/p20558/work/geom/optimised_geom_file/p20558_hewl_op.geom",
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default="/sf/cristallina/applications/mx/crmx-tools/geom_files/crmx8M_230322.geom",
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)
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)
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parser.add_argument(
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parser.add_argument(
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"-x",
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"-x",
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@@ -149,20 +149,22 @@ if __name__ == "__main__":
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)
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)
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parser.add_argument(
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parser.add_argument(
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"-p",
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"-p",
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"--p-group",
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"--p_group",
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help="p-group name",
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help="p-group name",
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type=str,
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type=str,
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)
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)
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args = parser.parse_args()
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args = parser.parse_args()
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# run geom converter
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# run geom converter
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if args.poni is not None:
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if args.p_group is None:
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print( "you must specify a p-group that the .geom file is associated with\n\nfor example -p p20560" )
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elif args.poni is not None:
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print( "reading poni file" )
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print( "reading poni file" )
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beam_y, beam_x, eV, clen = scrub_poni( args.poni )
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beam_y, beam_x, eV, clen = scrub_poni( args.poni )
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print( "beam x, beam_y = {0}, {1}\nphoton_energy = {2}\nclen = {3}".format( beam_x, beam_y, eV, clen ) )
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print( "beam x, beam_y = {0}, {1}\nphoton_energy = {2}\nclen = {3}".format( beam_x, beam_y, eV, clen ) )
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new_geom_name = write_new_positions( args.geom, beam_x, beam_y, clen, eV )
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new_geom_name = write_new_positions( args.geom, beam_x, beam_y, clen, eV, args.p_group )
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print( "updated .geom file with poni calculations\n new .geom = {0}".format( new_geom_name ) )
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print( "updated .geom file with poni calculations\n new .geom = {0}".format( new_geom_name ) )
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else:
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else:
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print( "manually input positions" )
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print( "manually input positions" )
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print( "beam x, beam_y = {0}, {1}\nphoton_energy = {2}\nclen = {3}".format( args.beam_x, args.beam_y, args.energy, args.clen ) )
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print( "beam x, beam_y = {0}, {1}\nphoton_energy = {2}\nclen = {3}".format( args.beam_x, args.beam_y, args.energy, args.clen ) )
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new_geom_name = write_new_positions( args.geom, args.beam_x, args.beam_y, args.clen, args.energy )
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new_geom_name = write_new_positions( args.geom, args.beam_x, args.beam_y, args.clen, args.energy, args.p_group )
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print( "updated .geom file with poni calculations\nnew .geom = {0}".format( new_geom_name ) )
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print( "updated .geom file with poni calculations\nnew .geom = {0}".format( new_geom_name ) )
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