diff --git a/README.md b/README.md
index 4606435..f77477c 100644
--- a/README.md
+++ b/README.md
@@ -37,12 +37,12 @@ Automatic Processing tool can also be installed from scratch (put this to the pl
 $ git clone https://gitlab.psi.ch/sf-daq/ap.git # or via ssh with 
                                                 # git clone git@gitlab.psi.ch:sf-daq/ap.git
 ```
-Needed conda environment can be sourced/used from the common place. In case new conda environment is needed, please install following packages in that conda:
+Needed conda environment can be sourced/used from the common place. In case new conda environment is needed, please install following packages in that environment:
 ```
 gspread numpy matplotlib
 ```
 
-In case of installation from source, so different location of the code and conda environment - change correspondingly line in scripts/env_setup.sh 
+In case of installation from source, so different location of the code and conda environment - change correspondingly lines in [env_setup.sh](#config_env_setup) file 
 
 ## Configuration files<a name="config"></a>
 
@@ -68,7 +68,7 @@ run9977 0.09413
 ```
 (for runs 9988 and 9977 - 9.212cm and 9.413cm will be used as detector distance, for all other runs a default value of 9.369cm will be used)
 
-### env_setup.sh
+### env_setup.sh<a name="config_env_setup"></a>
 During preparation [step](#usage1) this file should be filled (manually) with the proper values for the beamline name(alvra or bernina or ..), pgroup name (p12345), DETECTOR_NAME (JF17T16V01) used in experiment, THRESHOLD_INDEXING (can be changed, adapted, in run_index.sh file, see latter) and LOGBOOK (url to google spreadsheet which will be used for automatic filling)
 
 ### run_index.sh