sf-daq/ap
0
0
Fork 0
Code Issues Pull Requests Actions Packages Projects Releases Wiki Activity

Update README.md

Browse Source
This commit is contained in:
ozerov_d
2023-08-24 13:21:56 +02:00
parent 59fa172323
commit b0a4067aa7
1 changed files with 11 additions and 2 deletions
Download Patch File Download Diff File Expand all files Collapse all files

13
README.md
View File

@ -23,7 +23,7 @@ Automatic Processing tool checks for the new files/runs produced by sf-daq and r
## Installation<a name="installation"></a> ## Installation<a name="installation"></a>
### Pre-installed software (recommended) ### Pre-installed software (recommended)
Automatic Processing tool is installed in /sf/jungrau/applications/ap place and it's recommended to use if from that place (all examples below will be using that tool place). Automatic Processing tool is installed in /sf/jungfrau/applications/ap place and it's recommended to use if from that place (all examples below will be using that tool place).
Installed conda environment can be activated with Installed conda environment can be activated with
> $ source /sf/jungfrau/applications/miniconda3/etc/profile.d/conda.sh > $ source /sf/jungfrau/applications/miniconda3/etc/profile.d/conda.sh
@ -138,13 +138,22 @@ this file contains indexing parameters used by crystfel.
* setup/prepare spreadsheet for automatic filling: * setup/prepare spreadsheet for automatic filling:
> $ . ./env_setup.sh > $ . ./env_setup.sh
> >
> $ python /sf/jungrau/applications/ap/ap/update-spreadsheet.py --setup --log ${LOGBOOK} > $ python /sf/jungfrau/applications/ap/ap/update-spreadsheet.py --setup --log ${LOGBOOK}
### During Beamtime<a name="usage2"></a> ### During Beamtime<a name="usage2"></a>
#### start/stop automatic processing tool:<a name="usage2_start"></a> #### start/stop automatic processing tool:<a name="usage2_start"></a>
* to function properly, instruction for sf-daq to produce detector files must include
* adc_to_energy : True
* save_dap_results : True
* crystfel_lists_laser : True
Optional, to make files smaller:
* compression: True
* factor: Value (0.25 to round to 250eV or photon beam energy to make output in photon counts)
* login to swissfel online computing infrastructure with your personal PSI account: * login to swissfel online computing infrastructure with your personal PSI account:
> $ ssh psi_account@sf-l-001 > $ ssh psi_account@sf-l-001