RugnuxLiveStatus

Live rugnux processing of the last collection; kept until the next collection starts or POST /initialize. Times are taken when the image puller received a message, and are in seconds since the first image (before it arrives, since now). The frame rate is (images_received - 1) / last_image_s.

Properties

Name

Type

Description

Notes

state

str

placed_model

bool

The run placed the model: it can be fetched from `/rugnux/model.cif` and its maps from `/rugnux/map.ccp4`.

refined_model

bool

The run refined the placed model: `/rugnux/model.cif` and `/rugnux/map.ccp4` serve the refined model and its maps unless asked for `stage=placed`.

anomalous_map

bool

The merge kept the Bijvoet pairs, so with the placed model there is an anomalous difference map (`/rugnux/map.ccp4?type=anom`).

anomalous_signal

bool

The merged data carry usable anomalous signal (the summary’s "Anomalous" row says so)

model

RugnuxLiveModel

[optional]

space_group

str

Space group of the result (the summary’s "Space group" row); absent until the run is over

[optional]

d_min

float

High-resolution limit of the merge, in Angstrom; absent until the run is over, or without a merge

[optional]

isa

float

ISa of the error model; absent until the run is over, or where it was not determined

[optional]

probe

str

Answer of the early lattice probe on the first 60 degrees; empty until it answers

probe_s

float

When the probe answered, since the first image

[optional]

start_to_first_image_s

float

From the START message to the first image; set once the first image arrives

[optional]

message

str

Why the run failed or was skipped

images_expected

int

expected_collection_s

float

How long the collection is set up to take - images_expected times the image time; absent if not known

[optional]

images_received

int

elapsed_s

float

step_progress

float

Fraction of the current pass’s images

[optional]

steps

List[RugnuxLiveStep]

last_image_s

float

When the last image arrived, since the first image; set once the collection is over

[optional]

cut

str

Empty, or why the analysis was cut: `deadline` (`deadline_s` after the last image) or `cancel` (`POST /cancel`). The end message then carried what was established at the cut.

[optional]

cut_s

float

When the analysis was cut, since the first image

[optional]

last_image_to_written_s

float

From the last image received to all results written

[optional]

verdict

str

OK, WARNINGS, UNUSABLE or FAILED; empty until the run is over

verdict_text

str

summary

List[RugnuxSummaryRow]

warnings

List[str]

Example

from jfjoch_client.models.rugnux_live_status import RugnuxLiveStatus

# TODO update the JSON string below
json = "{}"
# create an instance of RugnuxLiveStatus from a JSON string
rugnux_live_status_instance = RugnuxLiveStatus.from_json(json)
# print the JSON string representation of the object
print(RugnuxLiveStatus.to_json())

# convert the object into a dict
rugnux_live_status_dict = rugnux_live_status_instance.to_dict()
# create an instance of RugnuxLiveStatus from a dict
rugnux_live_status_from_dict = RugnuxLiveStatus.from_dict(rugnux_live_status_dict)

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