2020-01-14 17:14:16 +01:00
parent 87dd9eb0e8
commit e7b60c995b
14 changed files with 4404 additions and 106 deletions
@@ -0,0 +1,53 @@
+from ijutils import *
+import java.util.Arrays  as Arrays
+
+ret = grab_frames(image, 3, roi=None, wait_next=True)
+av = average_frames(ret) 
+
+div = ret[0].copy()
+div.div(ret[1])
+
+save_as_tiff(ret[0], "{images}/0.tif", check=True)
+save_as_tiff(ret[1], "{images}/1.tif", check=True)
+save_as_tiff(ret[2], "{images}/2.tif", check=True)
+save_as_tiff(av, "{images}/av.tif", check=True)
+save_as_tiff(div, "{images}/div.tif", check=True)
+
+
+plot([ret[0].matrix, ret[1].matrix, ret[2].matrix, av.matrix, div.matrix], name=["1","2","3","av", "div"])
+
+
+
+i0=open_image("{images}/0.tif")
+a0 = get_ip_array(i0)
+i1=open_image("{images}/0.tif")
+a1 = get_ip_array(i1)
+i2=open_image("{images}/0.tif")
+a2 = get_ip_array(i2)
+ia=open_image("{images}/av.tif")
+aa = get_ip_array(ia)
+
+plot([a0,a1,a2,aa], name=["1","2","3","av"], title="Read")
+
+
+a = get_ip_array(load_array(ret[0].matrix))
+print Arrays.deepEquals(a, a0)
+
+
+a0 = get_ip_array(open_image("{images}/0.tif"))
+a1 = get_ip_array(open_image("{images}/1.tif"))
+a2 = get_ip_array(open_image("{images}/2.tif"))
+
+
+
+measures = [i0,i1,i2]
+av2=average_ips (measures, roi=None, as_float=True)  
+save_as_tiff(av2, "{images}/av2.tif", check=True)
+
+
+
+arr1=av.matrix
+arr2=get_ip_array(av2)
+print Arrays.deepEquals(arr1,arr2)
+plot([arr1[0], arr2[0]], name =["arr1", "arr2"], title = "Cmp")
+
@@ -1,5 +1,13 @@
 <?xml version="1.0" encoding="UTF-8" standalone="yes"?>
-<configuration xmlns="http://www.psi.ch/~ebner/models/scan/1.0">
-    <data/>
-    <scan/>
+<configuration xmlns="http://www.psi.ch/~ebner/models/scan/1.0" failOnSensorError="true">
+    <data fileName="fda"/>
+    <scan>
+        <dimension zigzag="false" dataGroup="false">
+            <positioner xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:type="PseudoPositioner" id="id683170">
+                <counts>10</counts>
+            </positioner>
+            <detector xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:type="Timestamp" id="id691479"/>
+        </dimension>
+    </scan>
+    <visualization xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:type="LinePlot" x="id683170" y="id691479"/>
 </configuration>