x09la/plugins/SIStem.java

import ch.psi.pshell.core.Context;
import ch.psi.pshell.core.JsonSerializer;
import ch.psi.pshell.device.Motor;
import ch.psi.pshell.device.Positioner;
import ch.psi.pshell.device.ReadonlyProcessVariable;
import ch.psi.pshell.plot.MatrixPlotSeries;
import ch.psi.pshell.plot.Plot;
import ch.psi.pshell.swing.DataPanel;
import ch.psi.pshell.ui.PanelProcessor;
import ch.psi.pshell.ui.QueueProcessor;
import ch.psi.utils.Arr;
import ch.psi.utils.Convert;
import ch.psi.utils.IO;
import ch.psi.utils.Reflection;
import ch.psi.utils.State;
import ch.psi.utils.swing.SwingUtils;
import java.awt.Color;
import java.awt.Component;
import java.awt.datatransfer.DataFlavor;
import java.awt.datatransfer.StringSelection;
import java.awt.datatransfer.Transferable;
import java.awt.dnd.DnDConstants;
import java.io.File;
import java.io.IOException;
import java.nio.file.Files;
import java.nio.file.Path;
import java.nio.file.Paths;
import java.util.ArrayList;
import java.util.HashMap;
import java.util.LinkedHashMap;
import java.util.List;
import java.util.Map;
import java.util.logging.Level;
import java.util.logging.Logger;
import javax.swing.DropMode;
import javax.swing.JComboBox;
import javax.swing.JComponent;
import javax.swing.JDialog;
import javax.swing.JFileChooser;
import javax.swing.JTable;
import javax.swing.JTextArea;
import javax.swing.JTextField;
import javax.swing.TransferHandler;
import javax.swing.filechooser.FileNameExtensionFilter;
import javax.swing.table.DefaultTableModel;

/**
 *
 */
public class SIStem extends PanelProcessor {

    File currentFile;
    final DefaultTableModel modelInactive;
    final DefaultTableModel modelFixed;
    final DefaultTableModel modelScanned;
    QueueProcessor queueProcessor;
    JDialog dataDialog;

    public static final String FILE_EXTENSION = "json";
    final JTextField[] scientaFloatFields;
    final JTextField[] scientaIntFields;
    final JComboBox[] scientaCombos;
    final JTextField[] scientaRangeFields;

    public SIStem() {
        initComponents();
        modelInactive = (DefaultTableModel) tableInactive.getModel();
        modelFixed = (DefaultTableModel) tableFixed.getModel();
        modelScanned = (DefaultTableModel) tableScanned.getModel();

        abstract class PositinerTransferHandler extends TransferHandler {

            @Override
            public int getSourceActions(JComponent c) {
                return DnDConstants.ACTION_COPY_OR_MOVE;
            }

            @Override
            public Transferable createTransferable(JComponent comp) {
                try {
                    JTable table = (JTable) comp;
                    return new StringSelection((String) table.getModel().getValueAt(table.getSelectedRow(), 0));
                } catch (Exception ex) {
                    return null;
                }
            }

            @Override
            public boolean canImport(TransferHandler.TransferSupport support) {
                return support.isDataFlavorSupported(DataFlavor.stringFlavor);
            }

            @Override
            public boolean importData(TransferHandler.TransferSupport support) {
                if (support.isDrop() && canImport(support)) {
                    try {
                        JTable.DropLocation dl = (JTable.DropLocation) support.getDropLocation();
                        String name = (String) support.getTransferable().getTransferData(DataFlavor.stringFlavor);
                        Positioner pos = getContext().getDevicePool().getByName(name, Positioner.class);
                        DefaultTableModel model = ((DefaultTableModel) ((JTable) support.getComponent()).getModel());
                        addPositioner(pos, model, dl.getRow(), getRowData(pos));
                    } catch (Exception ex) {
                        return false;
                    }
                }
                return true;
            }

            abstract Object[] getRowData(Positioner pos);
        };

        tableInactive.setDragEnabled(true);
        tableInactive.setDropMode(DropMode.INSERT_ROWS);
        tableInactive.setFillsViewportHeight(true);
        tableInactive.setTransferHandler(new PositinerTransferHandler() {
            @Override
            Object[] getRowData(Positioner pos) {
                return new Object[]{pos.getName()};
            }
        });

        tableFixed.setDragEnabled(true);
        tableFixed.setDropMode(DropMode.INSERT_ROWS);
        tableFixed.setFillsViewportHeight(true);
        tableFixed.setTransferHandler(new PositinerTransferHandler() {
            @Override
            Object[] getRowData(Positioner pos) {
                return new Object[]{pos.getName(), Double.NaN, pos.getUnit()};
            }
        });

        tableScanned.setDragEnabled(true);
        tableScanned.setDropMode(DropMode.INSERT_ROWS);
        tableScanned.setFillsViewportHeight(true);
        tableScanned.setTransferHandler(new PositinerTransferHandler() {
            @Override
            Object[] getRowData(Positioner pos) {
                return new Object[]{pos.getName(), Double.NaN, Double.NaN, 0, Double.NaN, pos.getUnit()};
            }
        });

        scientaFloatFields = new JTextField[]{textLowEnergy, textCenterEnergy, textHighEnergy, textStepEnergy,
            textLowThetaY, textCenterThetaY, textHighThetaY, textStepThetaY, textCenterThetaX};
        scientaIntFields = new JTextField[]{textSlices, textChannels};
        scientaRangeFields = new JTextField[]{textXChannelMax, textXChannelMin, textYChannelMax, textYChannelMin};
        scientaCombos = new JComboBox[]{comboPass, comboAcquisition, comboEnergy, comboLens, comboDetMode};

        try {
            Class scienta = getContext().getClassByName("Scienta");
            SwingUtils.setEnumCombo(comboLens, Reflection.getDeclaredClass(scienta, "LensMode"), true);
            SwingUtils.setEnumCombo(comboEnergy, Reflection.getDeclaredClass(scienta, "EnergyMode"), true);
            SwingUtils.setEnumCombo(comboAcquisition, Reflection.getDeclaredClass(scienta, "AcquisitionMode"), true);
            SwingUtils.setEnumCombo(comboDetMode, Reflection.getDeclaredClass(scienta, "DetectorMode"), true);
            comboPass.setModel(new javax.swing.DefaultComboBoxModel(Convert.toStringArray(scienta.getField("PASS_ENERGY_VALUES").get(null))));
        } catch (Exception ex) {
            getLogger().log(Level.SEVERE, null, ex);
        }

        for (JComboBox combo : scientaCombos) {
            SwingUtils.insertCombo(combo, "", 0);
        }
        buttonData.setVisible(isDetached());
        detectorPlot.getAxis(Plot.AxisId.X).setLabel("X-Scale (energy)");
        detectorPlot.getAxis(Plot.AxisId.Y).setLabel("Y-Scale (distance or angle)");
        clear();
    }

    void addPositioner(Positioner pos, DefaultTableModel model, int row, Object[] data) {
        if (row < 0) {
            row = model.getRowCount();
        }
        model.insertRow(row, data);
        removePositioner(pos, modelInactive, (model == modelInactive) ? row : -1);
        removePositioner(pos, modelFixed, (model == modelFixed) ? row : -1);
        removePositioner(pos, modelScanned, (model == modelScanned) ? row : -1);
    }

    void removePositioner(Positioner pos, DefaultTableModel model, int except) {
        for (int i = 0; i < model.getRowCount(); i++) {
            if ((except < 0) || (i != except)) {
                if (model.getValueAt(i, 0).equals(pos.getName())) {
                    model.removeRow(i);
                    break;
                }
            }
        }
    }

    //Overridable callbacks
    @Override
    public void onInitialize(int runCount) {
        if (runCount == 0) {
            clear();
        }
    }

    @Override
    public void onStateChange(State state, State former) {
        updateControls();
    }

    @Override
    public void onExecutedFile(String fileName, Object result) {
    }

    //Callback to perform update - in event thread
    @Override
    protected void doUpdate() {
    }

    @Override
    public String getFileName() {
        return (currentFile == null) ? null : currentFile.toString();
    }

    @Override
    public boolean isTabNameUpdated() {
        return false;
    }

    @Override
    public String getType() {
        return "SIStem";
    }

    @Override
    public boolean createMenuNew() {
        return true;
    }

    @Override
    public boolean createFilePanel() {
        return true;
    }

    @Override
    public String getDescription() {
        return "SIStem Scan definition file (*." + FILE_EXTENSION + ")";
    }

    @Override
    public String[] getExtensions() {
        return new String[]{FILE_EXTENSION};
    }

    @Override
    public String getHomePath() {
        return "{script}/scans";
    }

    @Override
    public void saveAs(String fileName) throws IOException {
        currentFile = new File(fileName);
        Map preActions = new LinkedHashMap();

        for (JComboBox combo : scientaCombos) {
            if ((combo.isVisible()) &&(combo.getSelectedIndex() > 0)) {
                preActions.put(combo.getName(), String.valueOf(combo.getSelectedItem()));
            }
        }
        for (JTextField text : scientaFloatFields) {
            if ((text.isVisible()) && (!text.getText().isBlank())) {
                preActions.put(text.getName(), Double.valueOf(text.getText().trim()));
            }
        }
        for (JTextField text : scientaIntFields) {
            if ((text.isVisible()) &&(!text.getText().isBlank())) {
                preActions.put(text.getName(), Integer.valueOf(text.getText().trim()));
            }
        }
        for (int i = 0; i < modelFixed.getRowCount(); i++) {
            preActions.put(modelFixed.getValueAt(i, 0), modelFixed.getValueAt(i, 1));
        }

        String[] positioners = new String[modelScanned.getRowCount()];
        Double[] start = new Double[modelScanned.getRowCount()];
        Double[] stop = new Double[modelScanned.getRowCount()];
        Integer[] steps = new Integer[modelScanned.getRowCount()];
        for (int i = 0; i < modelScanned.getRowCount(); i++) {
            positioners[i] = (String) modelScanned.getValueAt(i, 0);
            start[i] = (Double) modelScanned.getValueAt(i, 1);
            stop[i] = (Double) modelScanned.getValueAt(i, 2);
            steps[i] = (Integer) modelScanned.getValueAt(i, 3) - 1;
        }

        Integer[] range = new Integer[4];
        for (int i = 0; i < scientaRangeFields.length; i++) {
            range[i] = scientaRangeFields[i].getText().isBlank() ? null : Integer.valueOf(scientaRangeFields[i].getText().trim());
        }

        Map config = new HashMap();
        config.put("PRE_ACTIONS", preActions);
        config.put("RANGE", range.equals(new Integer[]{null, null, null, null}) ? new ArrayList() : Arr.toList(range));
        config.put("POSITIONERS", positioners);
        config.put("START", start);
        config.put("STOP", stop);
        config.put("STEPS", steps);

        config.put("SENSORS", getDevices(textSensors));
        config.put("SNAPS", getDevices(textSnapshots));
        config.put("DIAGS", getDevices(textDiagnostics));
        config.put("MONITORS", getDevices(textMonitors));

        config.put("SETTLING_TIME", spinnerLatency.getValue());
        config.put("PASSES", spinnerPasses.getValue());
        config.put("ZIGZAG", checkZigzag.isSelected());
        config.put("COMPRESSION", checkCompression.isSelected());

        String json = JsonSerializer.encode(config, true);
        Files.write(currentFile.toPath(), json.getBytes());
        updateControls();
    }

    @Override
    public void open(String fileName) throws IOException {
        clear();
        if (fileName != null) {
            Path path = Paths.get(fileName);
            String json = new String(Files.readAllBytes(path));
            currentFile = path.toFile();
            Map config = (Map) JsonSerializer.decode(json, Map.class);

            Map<String, Double> preActions = (Map) config.get("PRE_ACTIONS");
            List<Integer> range = (List) config.getOrDefault("RANGE", new ArrayList());

            List<String> positioners = (List) config.get("POSITIONERS");
            List<Double> start = (List) config.get("START");
            List<Double> stop = (List) config.get("STOP");
            List<Integer> steps = (List) config.get("STEPS");

            for (String name : preActions.keySet()) {
                for (JComboBox combo : scientaCombos) {
                    if (name.equals(combo.getName())) {
                        combo.setSelectedItem(String.valueOf(preActions.get(name)));
                        break;
                    }
                }
                for (JTextField text : Arr.append(scientaFloatFields, scientaIntFields)) {
                    if (name.equals(text.getName())) {
                        text.setText(String.valueOf(preActions.get(name)));
                        break;
                    }
                }
                for (int i = 0; i < range.size(); i++) {
                    if (range.get(i) != null) {
                        scientaRangeFields[i].setText(String.valueOf(range.get(i)).trim());
                    }
                }
                Positioner pos = getContext().getDevicePool().getByName(name, Positioner.class);
                if (pos != null) {
                    addPositioner(pos, modelFixed, -1, new Object[]{name, preActions.get(name), pos.getUnit()});
                }
            }
            for (int i = 0; i < positioners.size(); i++) {
                String name = positioners.get(i);
                Positioner pos = getContext().getDevicePool().getByName(name, Positioner.class);
                if (pos != null) {
                    addPositioner(pos, modelScanned, -1, new Object[]{name, start.get(i), stop.get(i), steps.get(i) + 1, 0, pos.getUnit()});
                }
            }

            setDevices(textSensors, (List<String>) config.get("SENSORS"));
            setDevices(textSnapshots, (List<String>) config.get("SNAPS"));
            setDevices(textDiagnostics, (List<String>) config.get("DIAGS"));
            setDevices(textMonitors, (List<String>) config.get("MONITORS"));

            spinnerLatency.setValue(config.get("SETTLING_TIME"));
            spinnerPasses.setValue(config.get("PASSES"));
            checkZigzag.setSelected((Boolean) config.get("ZIGZAG"));
            checkCompression.setSelected((Boolean) config.get("COMPRESSION"));
            updateDetectorPlot();
        }
        updateControls();
    }

    @Override
    public void clear() {
        currentFile = null;
        for (JComboBox combo : scientaCombos) {
            combo.setSelectedIndex(0);
        }

        for (JTextField text : Arr.append(Arr.append(scientaFloatFields, scientaIntFields), scientaRangeFields)) {
            text.setText("");
        }

        modelFixed.setRowCount(0);
        modelScanned.setRowCount(0);

        String[] DEFAULT_SENSORS = new String[]{"scienta.dataMatrix"};
        //String[] DEFAULT_SNAPS = new String[]{"temp_cryostat", "temp_sample1", "temp_headmech", "temp_sample2",
        //                                  "temp_boot1", "temp_shield", "temp_boot2", "temp_cryopump", 
        //                                  "acmi", "tcmp", "exit_slit", "fe_vert_width", "fe_horiz_width"};
        //String[] DEFAULT_DIAGS = new String[]{"x", "y", "z", "phi", "theta", "tilt"};
        String[] DEFAULT_DIAGS = getContext().getDevicePool().getAllNamesOrderedByName(Motor.class);
        String[] DEFAULT_SNAPS = Arr.remove(getContext().getDevicePool().getAllNamesOrderedByName(ReadonlyProcessVariable.class), DEFAULT_DIAGS);
        String[] DEFAULT_MONITORS = new String[]{"current"};

        setDevices(textSensors, Arr.toList(DEFAULT_SENSORS));
        setDevices(textSnapshots, Arr.toList(DEFAULT_SNAPS));
        setDevices(textDiagnostics, Arr.toList(DEFAULT_DIAGS));
        setDevices(textMonitors, Arr.toList(DEFAULT_MONITORS));
        initInactive();

        spinnerLatency.setValue(0.0);
        spinnerPasses.setValue(1);
        checkZigzag.setSelected(false);
        checkCompression.setSelected(true);
        updateControls();
        if (isLoaded()){
            updateDetectorPlot();
            try {
                updateLens();
            } catch (Exception ex) {
                getLogger().log(Level.WARNING, null, ex);
            }            
        }
    }

    @Override
    protected void onUnloaded() {
        if (queueProcessor != null) {
            getContext().getPluginManager().unloadPlugin(queueProcessor);
            getApp().exit(this);
        }
    }

    public List<String> getDevices(JTextArea text) {
        String[] devices = text.getText().split("\n");
        for (int i = 0; i < devices.length; i++) {
            devices[i] = devices[i].trim();
        }
        return Arr.toList(Arr.removeEquals(devices, ""));
    }

    public void setDevices(JTextArea text, List<String> devices) {
        text.setText(String.join("\n", devices));
    }

    void initInactive() {
        modelInactive.setRowCount(0);
        Positioner[] positioners = getContext().getDevicePool().getAllDevicesOrderedByName(Positioner.class);
        for (Positioner pos : positioners) {
            modelInactive.addRow(new Object[]{pos.getName()});
        }
    }

    @Override
    public void execute() throws Exception {
        checkValues();
        save();
        if (currentFile == null) {
            return;
        }

        HashMap args = new HashMap();
        args.put("NAME", getScanName());

        this.runAsync("templates/SIStem", args).handle((ret, ex) -> {
            if (ex != null) {
            }
            try {
            } catch (Exception e) {
                Logger.getLogger(SIStem.class.getName()).log(Level.SEVERE, null, e);
            }
            return ret;
        });

    }

    String getScanName() {
        String scan = null;
        if (currentFile != null) {
            scan = IO.getPrefix(currentFile);
            String home = getContext().getSetup().expandPath(getHomePath());
            String path =  IO.getRelativePath(currentFile.getParentFile().getPath(), home);
            if ((path!=null) && (!path.isBlank()) && !path.equals("/")){
                if (!path.endsWith("/")){
                    path=path+"/";
                }
                scan=path+scan;
            }
        }
        return scan;
    }

    void updateControls() {
        State state = getState();
        String fileName = getFileName();
        if (fileName == null) {
            textFile.setText("");
        } else {
            String home = getContext().getSetup().expandPath(getHomePath());
            if (IO.isSubPath(fileName, home)) {
                fileName = IO.getRelativePath(fileName, home);
            }
            textFile.setText(fileName);
        }

        buttonStart.setEnabled((state == State.Ready) && (currentFile != null));
        buttonAddToQueue.setEnabled(((state == State.Ready) && (currentFile != null)) || isDetached());
        buttonAbort.setEnabled(state.isProcessing());
        buttonScienta.setEnabled(state.isInitialized());
    }
    
    void updateLens() throws Exception{
        String lens = (String) comboLens.getSelectedItem();
        boolean empty = ((lens==null)||(lens.isBlank()));
        //if (empty){
            //lens =  (String) eval("str(scienta.lensMode)", true);
        //}
        boolean visibleX = empty || lens.startsWith("A") || lens.startsWith("D");
        boolean visibleY = empty || lens.startsWith("D");
        panelX.setVisible(visibleX);
        for (Component c : SwingUtils.getComponentsByType(panelX, Component.class)){
            c.setVisible(visibleX);
        }
        panelY.setVisible(visibleY);
        for (Component c : SwingUtils.getComponentsByType(panelY, Component.class)){
            c.setVisible(visibleY);
        }
        
    }

    void checkValues() {
        for (int i = 0; i < modelFixed.getRowCount(); i++) {
            if (Double.isNaN((Double) modelFixed.getValueAt(i, 1))) {
                throw new IllegalArgumentException("Invalid value for " + modelFixed.getValueAt(i, 0));
            }
        }
        for (int i = 0; i < modelScanned.getRowCount(); i++) {
            if (Double.isNaN((Double) modelScanned.getValueAt(i, 1))) {
                throw new IllegalArgumentException("Invalid start for " + modelFixed.getValueAt(i, 0));
            }
            if (Double.isNaN((Double) modelScanned.getValueAt(i, 2))) {
                throw new IllegalArgumentException("Invalid stop for " + modelFixed.getValueAt(i, 0));
            }
            if (((Integer) modelScanned.getValueAt(i, 3)) < 1) {
                throw new IllegalArgumentException("Invalid points for " + modelFixed.getValueAt(i, 0));
            }
        }
        for (JTextArea text : new JTextArea[]{textSensors, textDiagnostics, textSnapshots, textMonitors}) {
            for (String name : getDevices(text)) {
                try {
                    eval(name + ".take()", true);
                } catch (Exception ex) {
                    throw new IllegalArgumentException("Invalid device " + name + " in " + text.getName() + " table");
                }
            }
        }

        for (JTextField text : scientaFloatFields) {
            if (!text.getText().isBlank()) {
                try {
                    Double.valueOf(text.getText().trim());
                } catch (Exception ex) {
                    throw new IllegalArgumentException("Invalid value in " + text.getName());
                }
            }
        }
        for (JTextField text : scientaIntFields) {
            if (!text.getText().isBlank()) {
                try {
                    Integer.valueOf(text.getText().trim());
                } catch (Exception ex) {
                    throw new IllegalArgumentException("Invalid value in " + text.getName());
                }
            }
        }
        List<Boolean> defined = new ArrayList();
        for (JTextField text : scientaRangeFields) {
            if (!text.getText().isBlank()) {
                try {
                    Integer.valueOf(text.getText().trim());
                } catch (Exception ex) {
                    throw new IllegalArgumentException("Invalid value in " + text.getName());
                }
            }
            defined.add(text.getText().isBlank() ? false : true);
        }
        if ((defined.get(0) != defined.get(1)) || (defined.get(2) != defined.get(3))) {
            throw new IllegalArgumentException("Invalid detector range");
        }
    }

    void onTabChanged() {

    }

    void updateDetectorPlot() {
        try {
            int[] sensor = (int[]) eval("scienta.getSensorSize()", true);
            int[] roi = (int[]) eval("scienta.getROI()", true);
            roi=new int[]{roi[0], roi[1], roi[2] + roi[0], roi[3] + roi[1]};//Change to xmin, ymin, xmax, ymax
            try{
                roi[0]=Integer.valueOf(textXChannelMin.getText());               
            } catch (Exception ex){
            }
            try{
                roi[1]=Integer.valueOf(textYChannelMin.getText());
            } catch (Exception ex){
            }
            try{
                roi[2]=Integer.valueOf(textXChannelMax.getText());
            } catch (Exception ex){
            }
            try{
                roi[3]=Integer.valueOf(textYChannelMax.getText());
            } catch (Exception ex){
            }
            
            detectorPlot.getAxis(Plot.AxisId.X).setRange(0, sensor[0] - 1);
            detectorPlot.getAxis(Plot.AxisId.Y).setRange(0, sensor[1] - 1);            
                        
            if (detectorPlot.getNumberOfSeries()==0){
                double[][] arr = new double[][]{new double[]{Double.NaN}};
                detectorPlot.addSeries(new MatrixPlotSeries(""));
                detectorPlot.getSeries(0).setData(arr);
            }
            
            detectorPlot.removeMarker(null);
            detectorPlot.addMarker(roi[0], Plot.AxisId.X, "", Color.GREEN);
            detectorPlot.addMarker(roi[1], Plot.AxisId.Y, "", Color.GREEN);
            detectorPlot.addMarker(roi[2], Plot.AxisId.X, "", Color.GREEN);
            detectorPlot.addMarker(roi[3], Plot.AxisId.Y, "", Color.GREEN);
        } catch (Exception ex) {
            getLogger().log(Level.WARNING, null, ex);
        }
    }

    void plotImage() throws Exception {        
        double[][] arr = new double[][]{new double[]{Double.NaN}};
        int[] sensor = (int[]) eval("scienta.getSensorSize()", true);
        int[] roi = (int[]) eval("scienta.getROI()", true);
        try {
            Object data = eval("scienta.getDataMatrix().take()", true);
            if (data != null) {
                double[][] a = (double[][]) Convert.toDouble(data);
                double scaleX = roi[2] / a[0].length;
                double scaleY = roi[3] / a.length;
                arr = new double[sensor[0]][sensor[1]];
                for (int i = 0; i < a.length; i++) {
                    for (int j = 0; j < a[0].length; j++) {
                        arr[(int) (scaleY * i) + roi[1]][(int) (scaleX * j) + roi[0]] = a[i][j];
                    }
                }
            }
        } catch (Exception ex) {
            getLogger().log(Level.WARNING, null, ex);
        }
        detectorPlot.addSeries(new MatrixPlotSeries(""));
        detectorPlot.getSeries(0).setData(arr);
    }

    void onPlotShow() {
        detectorPlot.clear();
        updateDetectorPlot();
    }

    void onPlotHide() {
        detectorPlot.clear();
    }

    @SuppressWarnings("unchecked")
    // <editor-fold defaultstate="collapsed" desc="Generated Code">//GEN-BEGIN:initComponents
    private void initComponents() {

        buttonScienta = new javax.swing.JButton();
        buttonStart = new javax.swing.JButton();
        buttonAbort = new javax.swing.JButton();
        jPanel2 = new javax.swing.JPanel();
        jTabbedPane1 = new javax.swing.JTabbedPane();
        jPanel4 = new javax.swing.JPanel();
        panelEnergy = new javax.swing.JPanel();
        jLabel14 = new javax.swing.JLabel();
        textStepEnergy = new javax.swing.JTextField();
        jLabel13 = new javax.swing.JLabel();
        jLabel12 = new javax.swing.JLabel();
        jLabel15 = new javax.swing.JLabel();
        textHighEnergy = new javax.swing.JTextField();
        textCenterEnergy = new javax.swing.JTextField();
        textLowEnergy = new javax.swing.JTextField();
        panelY = new javax.swing.JPanel();
        jLabel17 = new javax.swing.JLabel();
        textStepThetaY = new javax.swing.JTextField();
        jLabel18 = new javax.swing.JLabel();
        jLabel19 = new javax.swing.JLabel();
        jLabel20 = new javax.swing.JLabel();
        textHighThetaY = new javax.swing.JTextField();
        textCenterThetaY = new javax.swing.JTextField();
        textLowThetaY = new javax.swing.JTextField();
        panelX = new javax.swing.JPanel();
        jLabel26 = new javax.swing.JLabel();
        textCenterThetaX = new javax.swing.JTextField();
        jPanel10 = new javax.swing.JPanel();
        jLabel11 = new javax.swing.JLabel();
        jLabel6 = new javax.swing.JLabel();
        jLabel5 = new javax.swing.JLabel();
        comboPass = new javax.swing.JComboBox();
        comboLens = new javax.swing.JComboBox();
        jLabel7 = new javax.swing.JLabel();
        comboAcquisition = new javax.swing.JComboBox();
        comboEnergy = new javax.swing.JComboBox();
        jPanel5 = new javax.swing.JPanel();
        jLabel16 = new javax.swing.JLabel();
        comboDetMode = new javax.swing.JComboBox();
        jLabel9 = new javax.swing.JLabel();
        jLabel25 = new javax.swing.JLabel();
        textSlices = new javax.swing.JTextField();
        textChannels = new javax.swing.JTextField();
        jLabel27 = new javax.swing.JLabel();
        textXChannelMin = new javax.swing.JTextField();
        textXChannelMax = new javax.swing.JTextField();
        jLabel10 = new javax.swing.JLabel();
        textYChannelMin = new javax.swing.JTextField();
        textYChannelMax = new javax.swing.JTextField();
        detectorPlot = new ch.psi.pshell.plot.MatrixPlotJFree(){
            @Override
            protected void onShow(){
                super.onShow();
                onPlotShow();
            }
            @Override
            protected void onHide(){
                super.onHide();
                onPlotHide();
            }
        };
        butonPlot = new javax.swing.JButton();
        jPanel11 = new javax.swing.JPanel();
        checkZigzag = new javax.swing.JCheckBox();
        jLabel4 = new javax.swing.JLabel();
        spinnerLatency = new javax.swing.JSpinner();
        jLabel1 = new javax.swing.JLabel();
        spinnerPasses = new javax.swing.JSpinner();
        jLabel8 = new javax.swing.JLabel();
        jLabel22 = new javax.swing.JLabel();
        checkCompression = new javax.swing.JCheckBox();
        jPanel1 = new javax.swing.JPanel();
        jScrollPane1 = new javax.swing.JScrollPane();
        tableInactive = new javax.swing.JTable();
        jScrollPane2 = new javax.swing.JScrollPane();
        tableFixed = new javax.swing.JTable();
        jScrollPane3 = new javax.swing.JScrollPane();
        tableScanned = new javax.swing.JTable();
        jPanel3 = new javax.swing.JPanel();
        jScrollPane4 = new javax.swing.JScrollPane();
        textSensors = new javax.swing.JTextArea();
        jScrollPane5 = new javax.swing.JScrollPane();
        textSnapshots = new javax.swing.JTextArea();
        jScrollPane6 = new javax.swing.JScrollPane();
        textDiagnostics = new javax.swing.JTextArea();
        jScrollPane7 = new javax.swing.JScrollPane();
        textMonitors = new javax.swing.JTextArea();
        buttonAddToQueue = new javax.swing.JButton();
        jLabel3 = new javax.swing.JLabel();
        textFile = new javax.swing.JTextField();
        buttonOpen = new javax.swing.JButton();
        buttonSave = new javax.swing.JButton();
        buttonClear = new javax.swing.JButton();
        buttonData = new javax.swing.JButton();

        buttonScienta.setText("Scienta Panel");
        buttonScienta.addActionListener(new java.awt.event.ActionListener() {
            public void actionPerformed(java.awt.event.ActionEvent evt) {
                buttonScientaActionPerformed(evt);
            }
        });

        buttonStart.setText("Start");
        buttonStart.addActionListener(new java.awt.event.ActionListener() {
            public void actionPerformed(java.awt.event.ActionEvent evt) {
                buttonStartActionPerformed(evt);
            }
        });

        buttonAbort.setText("Abort");
        buttonAbort.addActionListener(new java.awt.event.ActionListener() {
            public void actionPerformed(java.awt.event.ActionEvent evt) {
                buttonAbortActionPerformed(evt);
            }
        });

        jPanel2.setBorder(javax.swing.BorderFactory.createTitledBorder("Parameters"));

        jTabbedPane1.addChangeListener(new javax.swing.event.ChangeListener() {
            public void stateChanged(javax.swing.event.ChangeEvent evt) {
                jTabbedPane1StateChanged(evt);
            }
        });

        panelEnergy.setBorder(javax.swing.BorderFactory.createTitledBorder("Energy Range (eV)"));

        jLabel14.setHorizontalAlignment(javax.swing.SwingConstants.TRAILING);
        jLabel14.setText("High:");

        textStepEnergy.setName("scienta.energyStepSize"); // NOI18N

        jLabel13.setHorizontalAlignment(javax.swing.SwingConstants.TRAILING);
        jLabel13.setText("Center:");

        jLabel12.setHorizontalAlignment(javax.swing.SwingConstants.TRAILING);
        jLabel12.setText("Low:");

        jLabel15.setHorizontalAlignment(javax.swing.SwingConstants.TRAILING);
        jLabel15.setText("Step:");

        textHighEnergy.setName("scienta.highEnergy"); // NOI18N

        textCenterEnergy.setName("scienta.centerEnergy"); // NOI18N

        textLowEnergy.setName("scienta.lowEnergy"); // NOI18N

        javax.swing.GroupLayout panelEnergyLayout = new javax.swing.GroupLayout(panelEnergy);
        panelEnergy.setLayout(panelEnergyLayout);
        panelEnergyLayout.setHorizontalGroup(
            panelEnergyLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING)
            .addGroup(panelEnergyLayout.createSequentialGroup()
                .addContainerGap()
                .addGroup(panelEnergyLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING)
                    .addGroup(javax.swing.GroupLayout.Alignment.TRAILING, panelEnergyLayout.createSequentialGroup()
                        .addGroup(panelEnergyLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING)
                            .addComponent(jLabel14)
                            .addComponent(jLabel12, javax.swing.GroupLayout.Alignment.TRAILING)
                            .addComponent(jLabel13, javax.swing.GroupLayout.Alignment.TRAILING))
                        .addPreferredGap(javax.swing.LayoutStyle.ComponentPlacement.RELATED)
                        .addGroup(panelEnergyLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING)
                            .addComponent(textLowEnergy, javax.swing.GroupLayout.PREFERRED_SIZE, 68, javax.swing.GroupLayout.PREFERRED_SIZE)
                            .addComponent(textCenterEnergy, javax.swing.GroupLayout.PREFERRED_SIZE, 68, javax.swing.GroupLayout.PREFERRED_SIZE)
                            .addComponent(textHighEnergy, javax.swing.GroupLayout.PREFERRED_SIZE, 68, javax.swing.GroupLayout.PREFERRED_SIZE)))
                    .addGroup(javax.swing.GroupLayout.Alignment.TRAILING, panelEnergyLayout.createSequentialGroup()
                        .addComponent(jLabel15)
                        .addPreferredGap(javax.swing.LayoutStyle.ComponentPlacement.RELATED)
                        .addComponent(textStepEnergy, javax.swing.GroupLayout.PREFERRED_SIZE, 68, javax.swing.GroupLayout.PREFERRED_SIZE)))
                .addContainerGap())
        );

        panelEnergyLayout.linkSize(javax.swing.SwingConstants.HORIZONTAL, new java.awt.Component[] {textCenterEnergy, textHighEnergy, textLowEnergy, textStepEnergy});

        panelEnergyLayout.linkSize(javax.swing.SwingConstants.HORIZONTAL, new java.awt.Component[] {jLabel12, jLabel13, jLabel14, jLabel15});

        panelEnergyLayout.setVerticalGroup(
            panelEnergyLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING)
            .addGroup(panelEnergyLayout.createSequentialGroup()
                .addContainerGap()
                .addGroup(panelEnergyLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.BASELINE)
                    .addComponent(textLowEnergy, javax.swing.GroupLayout.PREFERRED_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.PREFERRED_SIZE)
                    .addComponent(jLabel12))
                .addPreferredGap(javax.swing.LayoutStyle.ComponentPlacement.RELATED)
                .addGroup(panelEnergyLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.BASELINE)
                    .addComponent(textCenterEnergy, javax.swing.GroupLayout.PREFERRED_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.PREFERRED_SIZE)
                    .addComponent(jLabel13))
                .addPreferredGap(javax.swing.LayoutStyle.ComponentPlacement.RELATED)
                .addGroup(panelEnergyLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.BASELINE)
                    .addComponent(textHighEnergy, javax.swing.GroupLayout.PREFERRED_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.PREFERRED_SIZE)
                    .addComponent(jLabel14))
                .addPreferredGap(javax.swing.LayoutStyle.ComponentPlacement.RELATED)
                .addGroup(panelEnergyLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.BASELINE)
                    .addComponent(textStepEnergy, javax.swing.GroupLayout.PREFERRED_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.PREFERRED_SIZE)
                    .addComponent(jLabel15))
                .addContainerGap(javax.swing.GroupLayout.DEFAULT_SIZE, Short.MAX_VALUE))
        );

        panelY.setBorder(javax.swing.BorderFactory.createTitledBorder("ThetaY "));

        jLabel17.setHorizontalAlignment(javax.swing.SwingConstants.TRAILING);
        jLabel17.setText("High:");

        textStepThetaY.setName("scienta.thetaYStepSize"); // NOI18N

        jLabel18.setHorizontalAlignment(javax.swing.SwingConstants.TRAILING);
        jLabel18.setText("Center:");

        jLabel19.setHorizontalAlignment(javax.swing.SwingConstants.TRAILING);
        jLabel19.setText("Low:");

        jLabel20.setHorizontalAlignment(javax.swing.SwingConstants.TRAILING);
        jLabel20.setText("Step:");

        textHighThetaY.setName("scienta.highThetaY"); // NOI18N

        textCenterThetaY.setName("scienta.centerThetaY"); // NOI18N

        textLowThetaY.setName("scienta.lowThetaY"); // NOI18N

        javax.swing.GroupLayout panelYLayout = new javax.swing.GroupLayout(panelY);
        panelY.setLayout(panelYLayout);
        panelYLayout.setHorizontalGroup(
            panelYLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING)
            .addGroup(panelYLayout.createSequentialGroup()
                .addContainerGap()
                .addGroup(panelYLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING)
                    .addGroup(javax.swing.GroupLayout.Alignment.TRAILING, panelYLayout.createSequentialGroup()
                        .addGroup(panelYLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING)
                            .addComponent(jLabel17)
                            .addComponent(jLabel19, javax.swing.GroupLayout.Alignment.TRAILING)
                            .addComponent(jLabel18, javax.swing.GroupLayout.Alignment.TRAILING))
                        .addPreferredGap(javax.swing.LayoutStyle.ComponentPlacement.RELATED)
                        .addGroup(panelYLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING)
                            .addComponent(textLowThetaY, javax.swing.GroupLayout.PREFERRED_SIZE, 68, javax.swing.GroupLayout.PREFERRED_SIZE)
                            .addComponent(textCenterThetaY, javax.swing.GroupLayout.PREFERRED_SIZE, 68, javax.swing.GroupLayout.PREFERRED_SIZE)
                            .addComponent(textHighThetaY, javax.swing.GroupLayout.PREFERRED_SIZE, 68, javax.swing.GroupLayout.PREFERRED_SIZE)))
                    .addGroup(javax.swing.GroupLayout.Alignment.TRAILING, panelYLayout.createSequentialGroup()
                        .addComponent(jLabel20)
                        .addPreferredGap(javax.swing.LayoutStyle.ComponentPlacement.RELATED)
                        .addComponent(textStepThetaY, javax.swing.GroupLayout.PREFERRED_SIZE, 68, javax.swing.GroupLayout.PREFERRED_SIZE)))
                .addContainerGap())
        );

        panelYLayout.linkSize(javax.swing.SwingConstants.HORIZONTAL, new java.awt.Component[] {jLabel17, jLabel18, jLabel19, jLabel20});

        panelYLayout.setVerticalGroup(
            panelYLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING)
            .addGroup(panelYLayout.createSequentialGroup()
                .addContainerGap()
                .addGroup(panelYLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.BASELINE)
                    .addComponent(textLowThetaY, javax.swing.GroupLayout.PREFERRED_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.PREFERRED_SIZE)
                    .addComponent(jLabel19))
                .addPreferredGap(javax.swing.LayoutStyle.ComponentPlacement.RELATED)
                .addGroup(panelYLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.BASELINE)
                    .addComponent(textCenterThetaY, javax.swing.GroupLayout.PREFERRED_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.PREFERRED_SIZE)
                    .addComponent(jLabel18))
                .addPreferredGap(javax.swing.LayoutStyle.ComponentPlacement.RELATED)
                .addGroup(panelYLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.BASELINE)
                    .addComponent(textHighThetaY, javax.swing.GroupLayout.PREFERRED_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.PREFERRED_SIZE)
                    .addComponent(jLabel17))
                .addPreferredGap(javax.swing.LayoutStyle.ComponentPlacement.RELATED)
                .addGroup(panelYLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.BASELINE)
                    .addComponent(textStepThetaY, javax.swing.GroupLayout.PREFERRED_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.PREFERRED_SIZE)
                    .addComponent(jLabel20))
                .addContainerGap(javax.swing.GroupLayout.DEFAULT_SIZE, Short.MAX_VALUE))
        );

        panelX.setBorder(javax.swing.BorderFactory.createTitledBorder("ThetaX"));

        jLabel26.setHorizontalAlignment(javax.swing.SwingConstants.TRAILING);
        jLabel26.setText("Center:");

        textCenterThetaX.setName("scienta.centerThetaX"); // NOI18N

        javax.swing.GroupLayout panelXLayout = new javax.swing.GroupLayout(panelX);
        panelX.setLayout(panelXLayout);
        panelXLayout.setHorizontalGroup(
            panelXLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING)
            .addGroup(panelXLayout.createSequentialGroup()
                .addContainerGap()
                .addComponent(jLabel26)
                .addPreferredGap(javax.swing.LayoutStyle.ComponentPlacement.RELATED)
                .addComponent(textCenterThetaX, javax.swing.GroupLayout.PREFERRED_SIZE, 68, javax.swing.GroupLayout.PREFERRED_SIZE)
                .addContainerGap())
        );
        panelXLayout.setVerticalGroup(
            panelXLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING)
            .addGroup(panelXLayout.createSequentialGroup()
                .addGap(38, 38, 38)
                .addGroup(panelXLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.BASELINE)
                    .addComponent(textCenterThetaX, javax.swing.GroupLayout.PREFERRED_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.PREFERRED_SIZE)
                    .addComponent(jLabel26))
                .addContainerGap(javax.swing.GroupLayout.DEFAULT_SIZE, Short.MAX_VALUE))
        );

        jLabel11.setHorizontalAlignment(javax.swing.SwingConstants.TRAILING);
        jLabel11.setText("Pass Energy:");

        jLabel6.setHorizontalAlignment(javax.swing.SwingConstants.TRAILING);
        jLabel6.setText("Acquisition:");

        jLabel5.setHorizontalAlignment(javax.swing.SwingConstants.TRAILING);
        jLabel5.setText("Energy Mode:");

        comboPass.setModel(new javax.swing.DefaultComboBoxModel(new String[] { " " }));
        comboPass.setToolTipText("");
        comboPass.setName("scienta.passEnergyDev"); // NOI18N

        comboLens.setModel(new javax.swing.DefaultComboBoxModel(new String[] { " " }));
        comboLens.setName("scienta.lensModeDev"); // NOI18N
        comboLens.addActionListener(new java.awt.event.ActionListener() {
            public void actionPerformed(java.awt.event.ActionEvent evt) {
                comboLensActionPerformed(evt);
            }
        });

        jLabel7.setHorizontalAlignment(javax.swing.SwingConstants.TRAILING);
        jLabel7.setText("Lens Mode:");

        comboAcquisition.setModel(new javax.swing.DefaultComboBoxModel(new String[] { " " }));
        comboAcquisition.setName("scienta.acquisitionModeDev"); // NOI18N

        comboEnergy.setModel(new javax.swing.DefaultComboBoxModel(new String[] { " " }));
        comboEnergy.setName("scienta.energyModeDev"); // NOI18N

        javax.swing.GroupLayout jPanel10Layout = new javax.swing.GroupLayout(jPanel10);
        jPanel10.setLayout(jPanel10Layout);
        jPanel10Layout.setHorizontalGroup(
            jPanel10Layout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING)
            .addGroup(jPanel10Layout.createSequentialGroup()
                .addContainerGap()
                .addGroup(jPanel10Layout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING, false)
                    .addGroup(jPanel10Layout.createSequentialGroup()
                        .addGroup(jPanel10Layout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING)
                            .addComponent(jLabel5)
                            .addComponent(jLabel6)
                            .addComponent(jLabel11))
                        .addPreferredGap(javax.swing.LayoutStyle.ComponentPlacement.RELATED)
                        .addGroup(jPanel10Layout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING)
                            .addComponent(comboPass, javax.swing.GroupLayout.PREFERRED_SIZE, 103, javax.swing.GroupLayout.PREFERRED_SIZE)
                            .addComponent(comboAcquisition, javax.swing.GroupLayout.PREFERRED_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.PREFERRED_SIZE)
                            .addComponent(comboEnergy, javax.swing.GroupLayout.PREFERRED_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.PREFERRED_SIZE)))
                    .addGroup(jPanel10Layout.createSequentialGroup()
                        .addComponent(jLabel7)
                        .addPreferredGap(javax.swing.LayoutStyle.ComponentPlacement.RELATED)
                        .addComponent(comboLens, javax.swing.GroupLayout.PREFERRED_SIZE, 103, javax.swing.GroupLayout.PREFERRED_SIZE)))
                .addContainerGap())
        );

        jPanel10Layout.linkSize(javax.swing.SwingConstants.HORIZONTAL, new java.awt.Component[] {comboAcquisition, comboEnergy, comboLens, comboPass});

        jPanel10Layout.linkSize(javax.swing.SwingConstants.HORIZONTAL, new java.awt.Component[] {jLabel11, jLabel5, jLabel6, jLabel7});

        jPanel10Layout.setVerticalGroup(
            jPanel10Layout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING)
            .addGroup(jPanel10Layout.createSequentialGroup()
                .addContainerGap()
                .addGroup(jPanel10Layout.createParallelGroup(javax.swing.GroupLayout.Alignment.BASELINE)
                    .addComponent(jLabel11)
                    .addComponent(comboPass, javax.swing.GroupLayout.PREFERRED_SIZE, 27, javax.swing.GroupLayout.PREFERRED_SIZE))
                .addPreferredGap(javax.swing.LayoutStyle.ComponentPlacement.RELATED)
                .addGroup(jPanel10Layout.createParallelGroup(javax.swing.GroupLayout.Alignment.BASELINE)
                    .addComponent(jLabel6)
                    .addComponent(comboAcquisition, javax.swing.GroupLayout.PREFERRED_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.PREFERRED_SIZE))
                .addPreferredGap(javax.swing.LayoutStyle.ComponentPlacement.RELATED)
                .addGroup(jPanel10Layout.createParallelGroup(javax.swing.GroupLayout.Alignment.BASELINE)
                    .addComponent(jLabel5)
                    .addComponent(comboEnergy, javax.swing.GroupLayout.PREFERRED_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.PREFERRED_SIZE))
                .addPreferredGap(javax.swing.LayoutStyle.ComponentPlacement.RELATED)
                .addGroup(jPanel10Layout.createParallelGroup(javax.swing.GroupLayout.Alignment.BASELINE)
                    .addComponent(jLabel7)
                    .addComponent(comboLens, javax.swing.GroupLayout.PREFERRED_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.PREFERRED_SIZE))
                .addContainerGap())
        );

        javax.swing.GroupLayout jPanel4Layout = new javax.swing.GroupLayout(jPanel4);
        jPanel4.setLayout(jPanel4Layout);
        jPanel4Layout.setHorizontalGroup(
            jPanel4Layout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING)
            .addGroup(jPanel4Layout.createSequentialGroup()
                .addContainerGap(javax.swing.GroupLayout.DEFAULT_SIZE, Short.MAX_VALUE)
                .addComponent(jPanel10, javax.swing.GroupLayout.PREFERRED_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.PREFERRED_SIZE)
                .addGap(18, 18, Short.MAX_VALUE)
                .addComponent(panelEnergy, javax.swing.GroupLayout.PREFERRED_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.PREFERRED_SIZE)
                .addGap(12, 12, 12)
                .addComponent(panelX, javax.swing.GroupLayout.PREFERRED_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.PREFERRED_SIZE)
                .addPreferredGap(javax.swing.LayoutStyle.ComponentPlacement.RELATED)
                .addComponent(panelY, javax.swing.GroupLayout.PREFERRED_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.PREFERRED_SIZE)
                .addContainerGap(18, Short.MAX_VALUE))
        );
        jPanel4Layout.setVerticalGroup(
            jPanel4Layout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING)
            .addGroup(jPanel4Layout.createSequentialGroup()
                .addGap(20, 20, 20)
                .addGroup(jPanel4Layout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING)
                    .addComponent(jPanel10, javax.swing.GroupLayout.PREFERRED_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.PREFERRED_SIZE)
                    .addGroup(jPanel4Layout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING, false)
                        .addComponent(panelEnergy, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, Short.MAX_VALUE)
                        .addComponent(panelY, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, Short.MAX_VALUE)
                        .addComponent(panelX, javax.swing.GroupLayout.Alignment.TRAILING, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, Short.MAX_VALUE)))
                .addContainerGap(javax.swing.GroupLayout.DEFAULT_SIZE, Short.MAX_VALUE))
        );

        jTabbedPane1.addTab("Analyzer", jPanel4);

        jLabel16.setHorizontalAlignment(javax.swing.SwingConstants.TRAILING);
        jLabel16.setText("Mode:");

        comboDetMode.setModel(new javax.swing.DefaultComboBoxModel(new String[] { " " }));
        comboDetMode.setToolTipText("");
        comboDetMode.setName("scienta.detectorModeDev"); // NOI18N

        jLabel9.setText("X Channel Range:");

        jLabel25.setHorizontalAlignment(javax.swing.SwingConstants.TRAILING);
        jLabel25.setText("Slices:");

        textSlices.setName("scienta.slices"); // NOI18N
        textSlices.addKeyListener(new java.awt.event.KeyAdapter() {
            public void keyReleased(java.awt.event.KeyEvent evt) {
                roiChanged(evt);
            }
        });

        textChannels.setName("scienta.channels"); // NOI18N
        textChannels.addKeyListener(new java.awt.event.KeyAdapter() {
            public void keyReleased(java.awt.event.KeyEvent evt) {
                roiChanged(evt);
            }
        });

        jLabel27.setHorizontalAlignment(javax.swing.SwingConstants.TRAILING);
        jLabel27.setText("Channels:");

        textXChannelMin.setName("x_channel_min"); // NOI18N
        textXChannelMin.addKeyListener(new java.awt.event.KeyAdapter() {
            public void keyReleased(java.awt.event.KeyEvent evt) {
                roiChanged(evt);
            }
        });

        textXChannelMax.setName("x_channel_max"); // NOI18N
        textXChannelMax.addKeyListener(new java.awt.event.KeyAdapter() {
            public void keyReleased(java.awt.event.KeyEvent evt) {
                roiChanged(evt);
            }
        });

        jLabel10.setText("Y Channel Range:");

        textYChannelMin.setName("y_channel_min"); // NOI18N
        textYChannelMin.addKeyListener(new java.awt.event.KeyAdapter() {
            public void keyReleased(java.awt.event.KeyEvent evt) {
                roiChanged(evt);
            }
        });

        textYChannelMax.setName("y_channel_max"); // NOI18N
        textYChannelMax.addKeyListener(new java.awt.event.KeyAdapter() {
            public void keyReleased(java.awt.event.KeyEvent evt) {
                roiChanged(evt);
            }
        });

        detectorPlot.setLegendVisible(false);
        detectorPlot.setTitle("");

        butonPlot.setText("Plot Image");
        butonPlot.addActionListener(new java.awt.event.ActionListener() {
            public void actionPerformed(java.awt.event.ActionEvent evt) {
                butonPlotActionPerformed(evt);
            }
        });

        javax.swing.GroupLayout jPanel5Layout = new javax.swing.GroupLayout(jPanel5);
        jPanel5.setLayout(jPanel5Layout);
        jPanel5Layout.setHorizontalGroup(
            jPanel5Layout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING)
            .addGroup(jPanel5Layout.createSequentialGroup()
                .addContainerGap(javax.swing.GroupLayout.DEFAULT_SIZE, Short.MAX_VALUE)
                .addGroup(jPanel5Layout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING)
                    .addGroup(jPanel5Layout.createSequentialGroup()
                        .addGroup(jPanel5Layout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING)
                            .addComponent(jLabel16)
                            .addComponent(jLabel9))
                        .addPreferredGap(javax.swing.LayoutStyle.ComponentPlacement.RELATED)
                        .addGroup(jPanel5Layout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING)
                            .addGroup(jPanel5Layout.createSequentialGroup()
                                .addComponent(textXChannelMin, javax.swing.GroupLayout.PREFERRED_SIZE, 68, javax.swing.GroupLayout.PREFERRED_SIZE)
                                .addPreferredGap(javax.swing.LayoutStyle.ComponentPlacement.RELATED)
                                .addComponent(textXChannelMax, javax.swing.GroupLayout.PREFERRED_SIZE, 68, javax.swing.GroupLayout.PREFERRED_SIZE))
                            .addComponent(comboDetMode, javax.swing.GroupLayout.PREFERRED_SIZE, 103, javax.swing.GroupLayout.PREFERRED_SIZE)))
                    .addGroup(jPanel5Layout.createSequentialGroup()
                        .addGroup(jPanel5Layout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING)
                            .addComponent(jLabel10)
                            .addComponent(jLabel25))
                        .addPreferredGap(javax.swing.LayoutStyle.ComponentPlacement.RELATED)
                        .addGroup(jPanel5Layout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING)
                            .addComponent(textSlices, javax.swing.GroupLayout.PREFERRED_SIZE, 68, javax.swing.GroupLayout.PREFERRED_SIZE)
                            .addGroup(jPanel5Layout.createSequentialGroup()
                                .addComponent(textYChannelMin, javax.swing.GroupLayout.PREFERRED_SIZE, 68, javax.swing.GroupLayout.PREFERRED_SIZE)
                                .addPreferredGap(javax.swing.LayoutStyle.ComponentPlacement.RELATED)
                                .addComponent(textYChannelMax, javax.swing.GroupLayout.PREFERRED_SIZE, 68, javax.swing.GroupLayout.PREFERRED_SIZE))))
                    .addGroup(jPanel5Layout.createSequentialGroup()
                        .addComponent(jLabel27)
                        .addPreferredGap(javax.swing.LayoutStyle.ComponentPlacement.RELATED)
                        .addComponent(textChannels, javax.swing.GroupLayout.PREFERRED_SIZE, 68, javax.swing.GroupLayout.PREFERRED_SIZE))
                    .addComponent(butonPlot))
                .addPreferredGap(javax.swing.LayoutStyle.ComponentPlacement.RELATED, javax.swing.GroupLayout.DEFAULT_SIZE, Short.MAX_VALUE)
                .addComponent(detectorPlot, javax.swing.GroupLayout.DEFAULT_SIZE, 482, Short.MAX_VALUE)
                .addContainerGap())
        );

        jPanel5Layout.linkSize(javax.swing.SwingConstants.HORIZONTAL, new java.awt.Component[] {jLabel10, jLabel16, jLabel25, jLabel27, jLabel9});

        jPanel5Layout.setVerticalGroup(
            jPanel5Layout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING)
            .addGroup(jPanel5Layout.createSequentialGroup()
                .addGroup(jPanel5Layout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING)
                    .addGroup(jPanel5Layout.createSequentialGroup()
                        .addGap(21, 21, 21)
                        .addGroup(jPanel5Layout.createParallelGroup(javax.swing.GroupLayout.Alignment.BASELINE)
                            .addComponent(jLabel16)
                            .addComponent(comboDetMode, javax.swing.GroupLayout.PREFERRED_SIZE, 27, javax.swing.GroupLayout.PREFERRED_SIZE))
                        .addGap(18, 18, 18)
                        .addGroup(jPanel5Layout.createParallelGroup(javax.swing.GroupLayout.Alignment.BASELINE)
                            .addComponent(jLabel9)
                            .addComponent(textXChannelMin, javax.swing.GroupLayout.PREFERRED_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.PREFERRED_SIZE)
                            .addComponent(textXChannelMax, javax.swing.GroupLayout.PREFERRED_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.PREFERRED_SIZE))
                        .addPreferredGap(javax.swing.LayoutStyle.ComponentPlacement.RELATED)
                        .addGroup(jPanel5Layout.createParallelGroup(javax.swing.GroupLayout.Alignment.BASELINE)
                            .addComponent(textChannels, javax.swing.GroupLayout.PREFERRED_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.PREFERRED_SIZE)
                            .addComponent(jLabel27))
                        .addGap(18, 18, 18)
                        .addGroup(jPanel5Layout.createParallelGroup(javax.swing.GroupLayout.Alignment.BASELINE)
                            .addComponent(jLabel10)
                            .addComponent(textYChannelMin, javax.swing.GroupLayout.PREFERRED_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.PREFERRED_SIZE)
                            .addComponent(textYChannelMax, javax.swing.GroupLayout.PREFERRED_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.PREFERRED_SIZE))
                        .addPreferredGap(javax.swing.LayoutStyle.ComponentPlacement.RELATED)
                        .addGroup(jPanel5Layout.createParallelGroup(javax.swing.GroupLayout.Alignment.BASELINE)
                            .addComponent(textSlices, javax.swing.GroupLayout.PREFERRED_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.PREFERRED_SIZE)
                            .addComponent(jLabel25))
                        .addGap(18, 18, Short.MAX_VALUE)
                        .addComponent(butonPlot))
                    .addGroup(javax.swing.GroupLayout.Alignment.TRAILING, jPanel5Layout.createSequentialGroup()
                        .addContainerGap()
                        .addComponent(detectorPlot, javax.swing.GroupLayout.PREFERRED_SIZE, 0, Short.MAX_VALUE)))
                .addContainerGap())
        );

        jTabbedPane1.addTab("Detector", jPanel5);

        jLabel4.setHorizontalAlignment(javax.swing.SwingConstants.TRAILING);
        jLabel4.setText("Settling Time:");

        spinnerLatency.setModel(new javax.swing.SpinnerNumberModel(0.0d, 0.0d, 1000.0d, 1.0d));

        jLabel1.setHorizontalAlignment(javax.swing.SwingConstants.TRAILING);
        jLabel1.setText("Passes:");

        spinnerPasses.setModel(new javax.swing.SpinnerNumberModel(1, 1, 1000, 1));

        jLabel8.setHorizontalAlignment(javax.swing.SwingConstants.TRAILING);
        jLabel8.setText("Zigzag:");

        jLabel22.setHorizontalAlignment(javax.swing.SwingConstants.TRAILING);
        jLabel22.setText("Compression:");

        javax.swing.GroupLayout jPanel11Layout = new javax.swing.GroupLayout(jPanel11);
        jPanel11.setLayout(jPanel11Layout);
        jPanel11Layout.setHorizontalGroup(
            jPanel11Layout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING)
            .addGroup(jPanel11Layout.createSequentialGroup()
                .addContainerGap(294, Short.MAX_VALUE)
                .addGroup(jPanel11Layout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING)
                    .addComponent(jLabel22)
                    .addComponent(jLabel8)
                    .addComponent(jLabel4)
                    .addComponent(jLabel1))
                .addPreferredGap(javax.swing.LayoutStyle.ComponentPlacement.RELATED)
                .addGroup(jPanel11Layout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING)
                    .addComponent(checkCompression)
                    .addComponent(checkZigzag)
                    .addComponent(spinnerLatency, javax.swing.GroupLayout.PREFERRED_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.PREFERRED_SIZE)
                    .addComponent(spinnerPasses, javax.swing.GroupLayout.PREFERRED_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.PREFERRED_SIZE))
                .addContainerGap(319, Short.MAX_VALUE))
        );

        jPanel11Layout.linkSize(javax.swing.SwingConstants.HORIZONTAL, new java.awt.Component[] {spinnerLatency, spinnerPasses});

        jPanel11Layout.linkSize(javax.swing.SwingConstants.HORIZONTAL, new java.awt.Component[] {jLabel1, jLabel22, jLabel4, jLabel8});

        jPanel11Layout.setVerticalGroup(
            jPanel11Layout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING)
            .addGroup(jPanel11Layout.createSequentialGroup()
                .addGap(20, 20, 20)
                .addGroup(jPanel11Layout.createParallelGroup(javax.swing.GroupLayout.Alignment.BASELINE)
                    .addComponent(checkCompression)
                    .addComponent(jLabel22))
                .addGap(18, 18, 18)
                .addGroup(jPanel11Layout.createParallelGroup(javax.swing.GroupLayout.Alignment.BASELINE)
                    .addComponent(checkZigzag)
                    .addComponent(jLabel8))
                .addPreferredGap(javax.swing.LayoutStyle.ComponentPlacement.RELATED)
                .addGroup(jPanel11Layout.createParallelGroup(javax.swing.GroupLayout.Alignment.BASELINE)
                    .addComponent(jLabel4)
                    .addComponent(spinnerLatency, javax.swing.GroupLayout.PREFERRED_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.PREFERRED_SIZE))
                .addPreferredGap(javax.swing.LayoutStyle.ComponentPlacement.RELATED)
                .addGroup(jPanel11Layout.createParallelGroup(javax.swing.GroupLayout.Alignment.BASELINE)
                    .addComponent(jLabel1)
                    .addComponent(spinnerPasses, javax.swing.GroupLayout.PREFERRED_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.PREFERRED_SIZE))
                .addContainerGap(99, Short.MAX_VALUE))
        );

        jTabbedPane1.addTab("Scan", jPanel11);

        jScrollPane1.setBorder(javax.swing.BorderFactory.createTitledBorder("Inactive"));

        tableInactive.setModel(new javax.swing.table.DefaultTableModel(
            new Object [][] {

            },
            new String [] {
                "Name"
            }
        ) {
            Class[] types = new Class [] {
                java.lang.String.class
            };
            boolean[] canEdit = new boolean [] {
                false
            };

            public Class getColumnClass(int columnIndex) {
                return types [columnIndex];
            }

            public boolean isCellEditable(int rowIndex, int columnIndex) {
                return canEdit [columnIndex];
            }
        });
        tableInactive.setSelectionMode(javax.swing.ListSelectionModel.SINGLE_SELECTION);
        jScrollPane1.setViewportView(tableInactive);

        jScrollPane2.setBorder(javax.swing.BorderFactory.createTitledBorder("Fixed"));

        tableFixed.setModel(new javax.swing.table.DefaultTableModel(
            new Object [][] {

            },
            new String [] {
                "Name", "Value", "Units"
            }
        ) {
            Class[] types = new Class [] {
                java.lang.String.class, java.lang.Double.class, java.lang.String.class
            };
            boolean[] canEdit = new boolean [] {
                false, true, false
            };

            public Class getColumnClass(int columnIndex) {
                return types [columnIndex];
            }

            public boolean isCellEditable(int rowIndex, int columnIndex) {
                return canEdit [columnIndex];
            }
        });
        tableFixed.setSelectionMode(javax.swing.ListSelectionModel.SINGLE_SELECTION);
        jScrollPane2.setViewportView(tableFixed);

        jScrollPane3.setBorder(javax.swing.BorderFactory.createTitledBorder("Scanned"));

        tableScanned.setModel(new javax.swing.table.DefaultTableModel(
            new Object [][] {

            },
            new String [] {
                "Name", "Start", "Stop", "Points", "Step", "Units"
            }
        ) {
            Class[] types = new Class [] {
                java.lang.String.class, java.lang.Double.class, java.lang.Double.class, java.lang.Integer.class, java.lang.Double.class, java.lang.String.class
            };
            boolean[] canEdit = new boolean [] {
                false, true, true, true, false, false
            };

            public Class getColumnClass(int columnIndex) {
                return types [columnIndex];
            }

            public boolean isCellEditable(int rowIndex, int columnIndex) {
                return canEdit [columnIndex];
            }
        });
        tableScanned.setSelectionMode(javax.swing.ListSelectionModel.SINGLE_SELECTION);
        jScrollPane3.setViewportView(tableScanned);

        javax.swing.GroupLayout jPanel1Layout = new javax.swing.GroupLayout(jPanel1);
        jPanel1.setLayout(jPanel1Layout);
        jPanel1Layout.setHorizontalGroup(
            jPanel1Layout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING)
            .addGroup(jPanel1Layout.createSequentialGroup()
                .addGap(0, 0, 0)
                .addComponent(jScrollPane1, javax.swing.GroupLayout.DEFAULT_SIZE, 159, Short.MAX_VALUE)
                .addPreferredGap(javax.swing.LayoutStyle.ComponentPlacement.RELATED)
                .addComponent(jScrollPane2, javax.swing.GroupLayout.DEFAULT_SIZE, 204, Short.MAX_VALUE)
                .addPreferredGap(javax.swing.LayoutStyle.ComponentPlacement.RELATED)
                .addComponent(jScrollPane3, javax.swing.GroupLayout.DEFAULT_SIZE, 313, Short.MAX_VALUE))
        );
        jPanel1Layout.setVerticalGroup(
            jPanel1Layout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING)
            .addGroup(jPanel1Layout.createSequentialGroup()
                .addGap(14, 14, 14)
                .addGroup(jPanel1Layout.createParallelGroup(javax.swing.GroupLayout.Alignment.TRAILING)
                    .addComponent(jScrollPane3, javax.swing.GroupLayout.DEFAULT_SIZE, 201, Short.MAX_VALUE)
                    .addComponent(jScrollPane2, javax.swing.GroupLayout.Alignment.LEADING, javax.swing.GroupLayout.PREFERRED_SIZE, 0, Short.MAX_VALUE)
                    .addComponent(jScrollPane1, javax.swing.GroupLayout.Alignment.LEADING, javax.swing.GroupLayout.PREFERRED_SIZE, 0, Short.MAX_VALUE))
                .addContainerGap())
        );

        jTabbedPane1.addTab("Positioners", jPanel1);

        jScrollPane4.setBorder(javax.swing.BorderFactory.createTitledBorder("Sensors"));

        textSensors.setColumns(12);
        textSensors.setRows(5);
        textSensors.setName("sensors"); // NOI18N
        jScrollPane4.setViewportView(textSensors);

        jScrollPane5.setBorder(javax.swing.BorderFactory.createTitledBorder("Snapshots"));

        textSnapshots.setColumns(12);
        textSnapshots.setRows(5);
        textSnapshots.setName("snapshots"); // NOI18N
        jScrollPane5.setViewportView(textSnapshots);

        jScrollPane6.setBorder(javax.swing.BorderFactory.createTitledBorder("Diagnostics"));

        textDiagnostics.setColumns(12);
        textDiagnostics.setRows(5);
        textDiagnostics.setName("diagnostics"); // NOI18N
        jScrollPane6.setViewportView(textDiagnostics);

        jScrollPane7.setBorder(javax.swing.BorderFactory.createTitledBorder("Monitors"));

        textMonitors.setColumns(12);
        textMonitors.setRows(5);
        textMonitors.setName("monitors"); // NOI18N
        jScrollPane7.setViewportView(textMonitors);

        javax.swing.GroupLayout jPanel3Layout = new javax.swing.GroupLayout(jPanel3);
        jPanel3.setLayout(jPanel3Layout);
        jPanel3Layout.setHorizontalGroup(
            jPanel3Layout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING)
            .addGroup(jPanel3Layout.createSequentialGroup()
                .addGap(0, 0, 0)
                .addComponent(jScrollPane4, javax.swing.GroupLayout.DEFAULT_SIZE, 166, Short.MAX_VALUE)
                .addPreferredGap(javax.swing.LayoutStyle.ComponentPlacement.RELATED)
                .addComponent(jScrollPane5, javax.swing.GroupLayout.DEFAULT_SIZE, 168, Short.MAX_VALUE)
                .addPreferredGap(javax.swing.LayoutStyle.ComponentPlacement.RELATED)
                .addComponent(jScrollPane6, javax.swing.GroupLayout.DEFAULT_SIZE, 168, Short.MAX_VALUE)
                .addPreferredGap(javax.swing.LayoutStyle.ComponentPlacement.RELATED)
                .addComponent(jScrollPane7, javax.swing.GroupLayout.DEFAULT_SIZE, 168, Short.MAX_VALUE)
                .addGap(0, 0, 0))
        );
        jPanel3Layout.setVerticalGroup(
            jPanel3Layout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING)
            .addGroup(javax.swing.GroupLayout.Alignment.TRAILING, jPanel3Layout.createSequentialGroup()
                .addGap(14, 14, 14)
                .addGroup(jPanel3Layout.createParallelGroup(javax.swing.GroupLayout.Alignment.TRAILING)
                    .addComponent(jScrollPane6, javax.swing.GroupLayout.Alignment.LEADING, javax.swing.GroupLayout.DEFAULT_SIZE, 201, Short.MAX_VALUE)
                    .addComponent(jScrollPane5, javax.swing.GroupLayout.Alignment.LEADING)
                    .addComponent(jScrollPane4, javax.swing.GroupLayout.Alignment.LEADING)
                    .addComponent(jScrollPane7))
                .addContainerGap())
        );

        jTabbedPane1.addTab("Records", jPanel3);

        javax.swing.GroupLayout jPanel2Layout = new javax.swing.GroupLayout(jPanel2);
        jPanel2.setLayout(jPanel2Layout);
        jPanel2Layout.setHorizontalGroup(
            jPanel2Layout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING)
            .addGroup(jPanel2Layout.createSequentialGroup()
                .addContainerGap()
                .addComponent(jTabbedPane1)
                .addContainerGap())
        );
        jPanel2Layout.setVerticalGroup(
            jPanel2Layout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING)
            .addGroup(jPanel2Layout.createSequentialGroup()
                .addContainerGap()
                .addComponent(jTabbedPane1)
                .addContainerGap())
        );

        buttonAddToQueue.setText("Queue");
        buttonAddToQueue.addActionListener(new java.awt.event.ActionListener() {
            public void actionPerformed(java.awt.event.ActionEvent evt) {
                buttonAddToQueueActionPerformed(evt);
            }
        });

        jLabel3.setText("File:");

        textFile.setDisabledTextColor(javax.swing.UIManager.getDefaults().getColor("TextField.foreground"));
        textFile.setEnabled(false);

        buttonOpen.setText("Open");
        buttonOpen.addActionListener(new java.awt.event.ActionListener() {
            public void actionPerformed(java.awt.event.ActionEvent evt) {
                buttonOpenActionPerformed(evt);
            }
        });

        buttonSave.setText("Save");
        buttonSave.addActionListener(new java.awt.event.ActionListener() {
            public void actionPerformed(java.awt.event.ActionEvent evt) {
                buttonSaveActionPerformed(evt);
            }
        });

        buttonClear.setText("Clear");
        buttonClear.addActionListener(new java.awt.event.ActionListener() {
            public void actionPerformed(java.awt.event.ActionEvent evt) {
                buttonClearActionPerformed(evt);
            }
        });

        buttonData.setText("Data Panel");
        buttonData.addActionListener(new java.awt.event.ActionListener() {
            public void actionPerformed(java.awt.event.ActionEvent evt) {
                buttonDataActionPerformed(evt);
            }
        });

        javax.swing.GroupLayout layout = new javax.swing.GroupLayout(this);
        this.setLayout(layout);
        layout.setHorizontalGroup(
            layout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING)
            .addComponent(jPanel2, javax.swing.GroupLayout.Alignment.TRAILING, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, Short.MAX_VALUE)
            .addGroup(layout.createSequentialGroup()
                .addContainerGap()
                .addGroup(layout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING)
                    .addGroup(layout.createSequentialGroup()
                        .addComponent(buttonScienta)
                        .addGap(18, 18, 18)
                        .addComponent(buttonData)
                        .addPreferredGap(javax.swing.LayoutStyle.ComponentPlacement.RELATED, javax.swing.GroupLayout.DEFAULT_SIZE, Short.MAX_VALUE)
                        .addComponent(buttonStart)
                        .addPreferredGap(javax.swing.LayoutStyle.ComponentPlacement.UNRELATED)
                        .addComponent(buttonAbort))
                    .addGroup(layout.createSequentialGroup()
                        .addComponent(jLabel3)
                        .addPreferredGap(javax.swing.LayoutStyle.ComponentPlacement.RELATED)
                        .addComponent(textFile)
                        .addPreferredGap(javax.swing.LayoutStyle.ComponentPlacement.UNRELATED)
                        .addComponent(buttonOpen)
                        .addPreferredGap(javax.swing.LayoutStyle.ComponentPlacement.RELATED)
                        .addComponent(buttonSave)
                        .addPreferredGap(javax.swing.LayoutStyle.ComponentPlacement.RELATED)
                        .addComponent(buttonAddToQueue)
                        .addPreferredGap(javax.swing.LayoutStyle.ComponentPlacement.RELATED)
                        .addComponent(buttonClear)))
                .addContainerGap())
        );

        layout.linkSize(javax.swing.SwingConstants.HORIZONTAL, new java.awt.Component[] {buttonAbort, buttonAddToQueue, buttonStart});

        layout.linkSize(javax.swing.SwingConstants.HORIZONTAL, new java.awt.Component[] {buttonClear, buttonOpen, buttonSave});

        layout.linkSize(javax.swing.SwingConstants.HORIZONTAL, new java.awt.Component[] {buttonData, buttonScienta});

        layout.setVerticalGroup(
            layout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING)
            .addGroup(javax.swing.GroupLayout.Alignment.TRAILING, layout.createSequentialGroup()
                .addGap(10, 10, 10)
                .addGroup(layout.createParallelGroup(javax.swing.GroupLayout.Alignment.BASELINE)
                    .addComponent(buttonOpen)
                    .addComponent(buttonSave)
                    .addComponent(jLabel3)
                    .addComponent(textFile, javax.swing.GroupLayout.PREFERRED_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.PREFERRED_SIZE)
                    .addComponent(buttonClear)
                    .addComponent(buttonAddToQueue))
                .addGap(18, 18, 18)
                .addComponent(jPanel2, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, Short.MAX_VALUE)
                .addGap(18, 18, 18)
                .addGroup(layout.createParallelGroup(javax.swing.GroupLayout.Alignment.BASELINE)
                    .addComponent(buttonScienta)
                    .addComponent(buttonStart)
                    .addComponent(buttonAbort)
                    .addComponent(buttonData))
                .addContainerGap())
        );
    }// </editor-fold>//GEN-END:initComponents

    private void buttonScientaActionPerformed(java.awt.event.ActionEvent evt) {//GEN-FIRST:event_buttonScientaActionPerformed
        try {
            this.showDevicePanel("scienta");
        } catch (Exception ex) {
            showException(ex);
        }
    }//GEN-LAST:event_buttonScientaActionPerformed

    private void buttonStartActionPerformed(java.awt.event.ActionEvent evt) {//GEN-FIRST:event_buttonStartActionPerformed
        try {
            execute();
        } catch (Exception ex) {
            showException(ex);
        }
    }//GEN-LAST:event_buttonStartActionPerformed

    private void buttonAbortActionPerformed(java.awt.event.ActionEvent evt) {//GEN-FIRST:event_buttonAbortActionPerformed
        try {
            abort();
        } catch (Exception ex) {
            showException(ex);
        }
    }//GEN-LAST:event_buttonAbortActionPerformed

    private void buttonOpenActionPerformed(java.awt.event.ActionEvent evt) {//GEN-FIRST:event_buttonOpenActionPerformed
        try {
            open();
        } catch (Exception ex) {
            showException(ex);
        }
    }//GEN-LAST:event_buttonOpenActionPerformed

    private void buttonSaveActionPerformed(java.awt.event.ActionEvent evt) {//GEN-FIRST:event_buttonSaveActionPerformed
        try {
            checkValues();

            //TODO: Factorized
            JFileChooser chooser = new JFileChooser(getContext().getSetup().expandPath(getHomePath()));
            FileNameExtensionFilter filter = new FileNameExtensionFilter(getDescription(), getExtensions());
            chooser.setFileFilter(filter);
            try {
                if (currentFile != null) {
                    chooser.setSelectedFile(currentFile);
                }
            } catch (Exception ex) {
                this.showException(ex);
            }
            int rVal = chooser.showSaveDialog(this);
            if (rVal == JFileChooser.APPROVE_OPTION) {
                String fileName = chooser.getSelectedFile().getAbsolutePath();
                if (IO.getExtension(chooser.getSelectedFile().getAbsolutePath()).isEmpty()) {
                    fileName += "." + FILE_EXTENSION;
                }
                saveAs(fileName);
            }
        } catch (Exception ex) {
            showException(ex);
        }
    }//GEN-LAST:event_buttonSaveActionPerformed

    private void buttonAddToQueueActionPerformed(java.awt.event.ActionEvent evt) {//GEN-FIRST:event_buttonAddToQueueActionPerformed
        try {
            QueueProcessor tq = null;
            if (this.isDetached()) {
                if ((queueProcessor == null) || !queueProcessor.isLoaded()) {
                    queueProcessor = new QueueProcessor();
                    Context.getInstance().getPluginManager().loadPlugin(queueProcessor, "Queue");
                    Context.getInstance().getPluginManager().startPlugin(queueProcessor);
                }
                tq = queueProcessor;
                tq.requestFocus();
            } else {
                List<QueueProcessor> queues = getView().getQueues();
                if (queues.size() == 0) {
                    tq = getView().openProcessor(QueueProcessor.class, null);
                } else {
                    tq = queues.get(0);
                }
                getView().getDocumentsTab().setSelectedComponent(tq);
            }
            if (currentFile != null) {
                tq.addNewFile(currentFile.getPath());
            }
        } catch (Exception ex) {
            showException(ex);
        }
    }//GEN-LAST:event_buttonAddToQueueActionPerformed

    private void buttonClearActionPerformed(java.awt.event.ActionEvent evt) {//GEN-FIRST:event_buttonClearActionPerformed
        try {
            clear();
        } catch (Exception ex) {
            showException(ex);
        }
    }//GEN-LAST:event_buttonClearActionPerformed

    private void buttonDataActionPerformed(java.awt.event.ActionEvent evt) {//GEN-FIRST:event_buttonDataActionPerformed
        try {
            if ((dataDialog == null) || (!dataDialog.isDisplayable())) {
                DataPanel panel = new DataPanel();
                panel.initialize();
                panel.setDefaultDataPanelListener();
                dataDialog = showDialog("Data", null, panel);
            }
            dataDialog.requestFocus();
        } catch (Exception ex) {
            showException(ex);
        }
    }//GEN-LAST:event_buttonDataActionPerformed

    private void jTabbedPane1StateChanged(javax.swing.event.ChangeEvent evt) {//GEN-FIRST:event_jTabbedPane1StateChanged
        try {
            onTabChanged();
        } catch (Exception ex) {
            showException(ex);
        }
    }//GEN-LAST:event_jTabbedPane1StateChanged

    private void butonPlotActionPerformed(java.awt.event.ActionEvent evt) {//GEN-FIRST:event_butonPlotActionPerformed
        try {
            plotImage();
        } catch (Exception ex) {
            showException(ex);
        }
    }//GEN-LAST:event_butonPlotActionPerformed

    private void roiChanged(java.awt.event.KeyEvent evt) {//GEN-FIRST:event_roiChanged
        updateDetectorPlot();
    }//GEN-LAST:event_roiChanged

    private void comboLensActionPerformed(java.awt.event.ActionEvent evt) {//GEN-FIRST:event_comboLensActionPerformed
        try {
            updateLens();
        } catch (Exception ex) {
            showException(ex);
        }
    }//GEN-LAST:event_comboLensActionPerformed


    // Variables declaration - do not modify//GEN-BEGIN:variables
    private javax.swing.JButton butonPlot;
    private javax.swing.JButton buttonAbort;
    private javax.swing.JButton buttonAddToQueue;
    private javax.swing.JButton buttonClear;
    private javax.swing.JButton buttonData;
    private javax.swing.JButton buttonOpen;
    private javax.swing.JButton buttonSave;
    private javax.swing.JButton buttonScienta;
    private javax.swing.JButton buttonStart;
    private javax.swing.JCheckBox checkCompression;
    private javax.swing.JCheckBox checkZigzag;
    private javax.swing.JComboBox comboAcquisition;
    private javax.swing.JComboBox comboDetMode;
    private javax.swing.JComboBox comboEnergy;
    private javax.swing.JComboBox comboLens;
    private javax.swing.JComboBox comboPass;
    private ch.psi.pshell.plot.MatrixPlotJFree detectorPlot;
    private javax.swing.JLabel jLabel1;
    private javax.swing.JLabel jLabel10;
    private javax.swing.JLabel jLabel11;
    private javax.swing.JLabel jLabel12;
    private javax.swing.JLabel jLabel13;
    private javax.swing.JLabel jLabel14;
    private javax.swing.JLabel jLabel15;
    private javax.swing.JLabel jLabel16;
    private javax.swing.JLabel jLabel17;
    private javax.swing.JLabel jLabel18;
    private javax.swing.JLabel jLabel19;
    private javax.swing.JLabel jLabel20;
    private javax.swing.JLabel jLabel22;
    private javax.swing.JLabel jLabel25;
    private javax.swing.JLabel jLabel26;
    private javax.swing.JLabel jLabel27;
    private javax.swing.JLabel jLabel3;
    private javax.swing.JLabel jLabel4;
    private javax.swing.JLabel jLabel5;
    private javax.swing.JLabel jLabel6;
    private javax.swing.JLabel jLabel7;
    private javax.swing.JLabel jLabel8;
    private javax.swing.JLabel jLabel9;
    private javax.swing.JPanel jPanel1;
    private javax.swing.JPanel jPanel10;
    private javax.swing.JPanel jPanel11;
    private javax.swing.JPanel jPanel2;
    private javax.swing.JPanel jPanel3;
    private javax.swing.JPanel jPanel4;
    private javax.swing.JPanel jPanel5;
    private javax.swing.JScrollPane jScrollPane1;
    private javax.swing.JScrollPane jScrollPane2;
    private javax.swing.JScrollPane jScrollPane3;
    private javax.swing.JScrollPane jScrollPane4;
    private javax.swing.JScrollPane jScrollPane5;
    private javax.swing.JScrollPane jScrollPane6;
    private javax.swing.JScrollPane jScrollPane7;
    private javax.swing.JTabbedPane jTabbedPane1;
    private javax.swing.JPanel panelEnergy;
    private javax.swing.JPanel panelX;
    private javax.swing.JPanel panelY;
    private javax.swing.JSpinner spinnerLatency;
    private javax.swing.JSpinner spinnerPasses;
    private javax.swing.JTable tableFixed;
    private javax.swing.JTable tableInactive;
    private javax.swing.JTable tableScanned;
    private javax.swing.JTextField textCenterEnergy;
    private javax.swing.JTextField textCenterThetaX;
    private javax.swing.JTextField textCenterThetaY;
    private javax.swing.JTextField textChannels;
    private javax.swing.JTextArea textDiagnostics;
    private javax.swing.JTextField textFile;
    private javax.swing.JTextField textHighEnergy;
    private javax.swing.JTextField textHighThetaY;
    private javax.swing.JTextField textLowEnergy;
    private javax.swing.JTextField textLowThetaY;
    private javax.swing.JTextArea textMonitors;
    private javax.swing.JTextArea textSensors;
    private javax.swing.JTextField textSlices;
    private javax.swing.JTextArea textSnapshots;
    private javax.swing.JTextField textStepEnergy;
    private javax.swing.JTextField textStepThetaY;
    private javax.swing.JTextField textXChannelMax;
    private javax.swing.JTextField textXChannelMin;
    private javax.swing.JTextField textYChannelMax;
    private javax.swing.JTextField textYChannelMin;
    // End of variables declaration//GEN-END:variables
}