From 100809f1631ed866af601a35a1f8edafb0237e2c Mon Sep 17 00:00:00 2001
From: gac-x03da <gac-x03da@x03da-cons-1.psi.ch>
Date: Tue, 9 Jul 2019 16:06:44 +0200
Subject: [PATCH] Script execution

---
 script/develop/ManipulatorYZFlyScan.py | 59 ++++++++++++++++++++++++++
 1 file changed, 59 insertions(+)
 create mode 100644 script/develop/ManipulatorYZFlyScan.py

diff --git a/script/develop/ManipulatorYZFlyScan.py b/script/develop/ManipulatorYZFlyScan.py
new file mode 100644
index 00000000..210e4fac
--- /dev/null
+++ b/script/develop/ManipulatorYZFlyScan.py
@@ -0,0 +1,59 @@
+"""
+Continuous 2D Manipulator scan (experimental)
+
+set manipulator scan parameters below.
+set analyser parameters separately!
+"""
+
+import math
+
+MOTORS = (ManipulatorY)
+#SENSORS = (Counts, Scienta.spectrum, SampleCurrent, RefCurrent, MachineCurrent, EnergyDistribution, AngleDistribution)
+SENSORS = (Counts, Scienta.dataMatrix, SampleCurrent, RefCurrent, MachineCurrent, EnergyDistribution, AngleDistribution)
+RANGE_Y = (-5., +5)
+RANGE_Z = (114., 116.)
+STEPS_Y = 20
+# actual number of positions will be +1!
+STEPS_Z = 2
+RELATIVE = False
+LATENCY = 0.0
+ENDSCAN = False
+ZIGZAG = False
+
+#set_preference(Preference.ENABLED_PLOTS, [ManipulatorPhi, ManipulatorTheta, Scienta.dataMatrix, ImageIntegrator])
+#set_preference(Preference.PLOT_TYPES,{'ImageIntegrator':1})
+adjust_sensors()
+set_adc_averaging()
+#set_preference(Preference.PLOT_TYPES, {'Scienta spectrum':1})
+
+# time per scienta acquisition in seconds
+time1 = time.time()
+trig_scienta()
+time2 = time.time()
+scienta_time = (time2 - time1)
+print "scienta_time: ", scienta_time
+
+# time for one Y scan in seconds
+fly_time = scienta_time * STEPS_Y
+print "Y time: ", fly_time
+
+STEP_Z = (RANGE_Z[1] - RANGE_Z[0]) / STEPS_Z
+positions_z = [RANGE_Z[0] + STEP_Z * i for i in range(STEPS_Z)]
+print "Z positions: ", positions_z
+
+def before_pass(index, scan):
+    global positions_z
+    print "Starting pass: ", index
+    z = positions_z[index-1]
+    ManipulatorZ.write(z)
+    print "z = ", z
+    ManipulatorZ.waitValueInRange(z, 1.0, 100)
+
+    
+try:
+    cscan(MOTORS, SENSORS, RANGE_Y[0], RANGE_Y[1], STEPS_Y, time=fly_time, passes=len(positions_z), zigzag=ZIGZAG, before_read=before_readout, after_read = after_readout, before_pass = before_pass, check_positions = False)
+    
+finally:
+    if ENDSCAN:
+        after_scan()
+        
\ No newline at end of file