diff --git a/config/config.properties b/config/config.properties index d8b6ed1..01be8d8 100755 --- a/config/config.properties +++ b/config/config.properties @@ -1,4 +1,4 @@ -#Wed Feb 06 10:42:47 CET 2019 +#Mon Mar 18 10:44:11 CET 2019 autoSaveScanData=true commandExecutionEvents=false createSessionFiles=false @@ -13,6 +13,7 @@ dataServerPort=-1 depthDimension=0 devicePoolFile={config}/devices.properties deviceUpdateStrategyFile={config}/update.properties +hideServerMessages=false hostName= instanceName=OP logDaysToLive=30 diff --git a/devices/CurrentCamera.properties b/devices/CurrentCamera.properties index c9f30dd..aacbe02 100644 --- a/devices/CurrentCamera.properties +++ b/devices/CurrentCamera.properties @@ -1,20 +1,20 @@ -#Mon Mar 04 13:47:17 CET 2019 +#Tue Mar 26 09:08:16 CET 2019 \u0000= \u0000\u0000\u0000\u0000= \u0000\u0000\u0000\u0000\u0000\u0000\u0000\u0000\u0000\u0000\u0000\u0000\u0000\u0000\u0000\u0000\u0000\u0000\u0000\u0000\u0000\u0000\u0000\u0000\u0000\u0000= -colormap=Flame -colormapAutomatic=true +colormap=Blue +colormapAutomatic=false colormapLogarithmic=false -colormapMax=18000.0 -colormapMin=0.0 +colormapMax=107.0 +colormapMin=88.0 flipHorizontally=false flipVertically=false grayscale=false -imageHeight=1024 -imageWidth=1280 +imageHeight=494 +imageWidth=659 invert=false -regionStartX=1 -regionStartY=1 +regionStartX=0 +regionStartY=0 rescaleFactor=1.0 rescaleOffset=0.0 roiHeight=-1 @@ -25,10 +25,10 @@ rotation=0.0 rotationCrop=false scale=1.0 serverURL=null -spatialCalOffsetX=-50.03903200624512 -spatialCalOffsetY=-50.048780487804876 -spatialCalScaleX=-1.0 -spatialCalScaleY=-1.0 +spatialCalOffsetX=-640.3335070349141 +spatialCalOffsetY=-512.4270225187656 +spatialCalScaleX=-8.4375 +spatialCalScaleY=-8.49609375 spatialCalUnits=null t= transpose=false diff --git a/devices/Image Averager.properties b/devices/Image Averager.properties index 5cc86fd..5ff9594 100644 --- a/devices/Image Averager.properties +++ b/devices/Image Averager.properties @@ -1,9 +1,9 @@ -#Fri Mar 01 00:21:13 CET 2019 +#Tue Mar 19 14:50:41 CET 2019 colormap=Flame colormapAutomatic=true colormapLogarithmic=false -colormapMax=10000.0 -colormapMin=0.0 +colormapMax=1356.0 +colormapMin=6.0 flipHorizontally=false flipVertically=false grayscale=false @@ -21,9 +21,9 @@ roiY=0 rotation=0.0 rotationCrop=false scale=1.0 -spatialCalOffsetX=-415.6307007415859 -spatialCalOffsetY=-213.43204623518318 -spatialCalScaleX=-15.057748904706497 -spatialCalScaleY=-11.764705882352942 +spatialCalOffsetX=-131.0 +spatialCalOffsetY=-84.55263143586453 +spatialCalScaleX=-15.559673602764423 +spatialCalScaleY=-11.299434862638774 spatialCalUnits=null transpose=false diff --git a/devices/cam_server.properties b/devices/cam_server.properties index a83da38..7a16003 100644 --- a/devices/cam_server.properties +++ b/devices/cam_server.properties @@ -1,4 +1,4 @@ -#Thu Feb 28 23:25:52 CET 2019 +#Mon Mar 18 14:16:14 CET 2019 colormap=Flame colormapAutomatic=true colormapLogarithmic=false diff --git a/plugins/GunEnergyScan.form b/plugins/GunEnergyScan.form index f6f57b0..d9a99a9 100644 --- a/plugins/GunEnergyScan.form +++ b/plugins/GunEnergyScan.form @@ -35,6 +35,7 @@ + @@ -54,9 +55,11 @@ - + - + + + @@ -112,6 +115,11 @@ + + + + + @@ -145,6 +153,11 @@ + + + + + @@ -229,6 +242,21 @@ + + + + + + + + + + + + + + + @@ -334,7 +362,7 @@ - + @@ -394,5 +422,69 @@ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + diff --git a/plugins/GunEnergyScan.java b/plugins/GunEnergyScan.java index 711dfad..121b0aa 100644 --- a/plugins/GunEnergyScan.java +++ b/plugins/GunEnergyScan.java @@ -7,6 +7,7 @@ import ch.psi.pshell.ui.Panel; import ch.psi.utils.State; import ch.psi.utils.swing.SwingUtils; import java.util.ArrayList; +import java.util.List; import javax.swing.JSpinner; /** @@ -35,9 +36,11 @@ public class GunEnergyScan extends Panel { spinnerStep.setEnabled(enabled); spinnerSamples.setEnabled(enabled); spinnerLatency.setEnabled(enabled); + spinnerThreshold.setEnabled(enabled); spinnerDispersion.setEnabled(enabled); spinnerEnergy.setEnabled(enabled); buttonPhaseSet.setEnabled(enabled && !textRefPhase.getText().trim().isEmpty()); + buttonSetDelay.setEnabled(enabled && !textOffset.getText().trim().isEmpty()); } @Override @@ -64,6 +67,8 @@ public class GunEnergyScan extends Panel { labelLatency = new javax.swing.JLabel(); spinnerLatency = new javax.swing.JSpinner(); spinnerStop = new javax.swing.JSpinner(); + spinnerThreshold = new javax.swing.JSpinner(); + labelLatency1 = new javax.swing.JLabel(); panelBeamPars = new javax.swing.JPanel(); spinnerDispersion = new javax.swing.JSpinner(); labelEnergy = new javax.swing.JLabel(); @@ -76,6 +81,10 @@ public class GunEnergyScan extends Panel { jLabel1 = new javax.swing.JLabel(); buttonPhaseSet = new javax.swing.JButton(); textRefPhase = new javax.swing.JTextField(); + jPanel2 = new javax.swing.JPanel(); + jLabel2 = new javax.swing.JLabel(); + buttonSetDelay = new javax.swing.JButton(); + textOffset = new javax.swing.JTextField(); setPreferredSize(new java.awt.Dimension(737, 445)); @@ -107,6 +116,11 @@ public class GunEnergyScan extends Panel { spinnerStop.setMinimumSize(new java.awt.Dimension(53, 20)); spinnerStop.setPreferredSize(new java.awt.Dimension(64, 20)); + spinnerThreshold.setModel(new javax.swing.SpinnerNumberModel(500.0d, 0.0d, 10000.0d, 100.0d)); + spinnerThreshold.setPreferredSize(new java.awt.Dimension(64, 20)); + + labelLatency1.setText("Threshold:"); + javax.swing.GroupLayout panelScanParsLayout = new javax.swing.GroupLayout(panelScanPars); panelScanPars.setLayout(panelScanParsLayout); panelScanParsLayout.setHorizontalGroup( @@ -133,7 +147,11 @@ public class GunEnergyScan extends Panel { .addGroup(panelScanParsLayout.createSequentialGroup() .addComponent(labelStep) .addGap(2, 2, 2) - .addComponent(spinnerStep, javax.swing.GroupLayout.PREFERRED_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.PREFERRED_SIZE))) + .addComponent(spinnerStep, javax.swing.GroupLayout.PREFERRED_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.PREFERRED_SIZE)) + .addGroup(panelScanParsLayout.createSequentialGroup() + .addComponent(labelLatency1) + .addGap(2, 2, 2) + .addComponent(spinnerThreshold, javax.swing.GroupLayout.PREFERRED_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.PREFERRED_SIZE))) .addContainerGap(javax.swing.GroupLayout.DEFAULT_SIZE, Short.MAX_VALUE)) ); panelScanParsLayout.setVerticalGroup( @@ -159,6 +177,10 @@ public class GunEnergyScan extends Panel { .addGroup(panelScanParsLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.BASELINE) .addComponent(spinnerLatency, javax.swing.GroupLayout.PREFERRED_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.PREFERRED_SIZE) .addComponent(labelLatency)) + .addPreferredGap(javax.swing.LayoutStyle.ComponentPlacement.RELATED) + .addGroup(panelScanParsLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.BASELINE) + .addComponent(spinnerThreshold, javax.swing.GroupLayout.PREFERRED_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.PREFERRED_SIZE) + .addComponent(labelLatency1)) .addContainerGap(javax.swing.GroupLayout.DEFAULT_SIZE, Short.MAX_VALUE)) ); @@ -219,7 +241,7 @@ public class GunEnergyScan extends Panel { } }); - jPanel1.setBorder(javax.swing.BorderFactory.createTitledBorder("Set Phase")); + jPanel1.setBorder(javax.swing.BorderFactory.createTitledBorder("Set RF Phase")); jLabel1.setText("Ref phase:"); @@ -261,6 +283,48 @@ public class GunEnergyScan extends Panel { .addContainerGap(javax.swing.GroupLayout.DEFAULT_SIZE, Short.MAX_VALUE)) ); + jPanel2.setBorder(javax.swing.BorderFactory.createTitledBorder("Set Laser Delay ")); + + jLabel2.setText("Offset:"); + + buttonSetDelay.setText("Set"); + buttonSetDelay.setEnabled(false); + buttonSetDelay.addActionListener(new java.awt.event.ActionListener() { + public void actionPerformed(java.awt.event.ActionEvent evt) { + buttonSetDelayActionPerformed(evt); + } + }); + + textOffset.setEditable(false); + textOffset.setHorizontalAlignment(javax.swing.JTextField.CENTER); + + javax.swing.GroupLayout jPanel2Layout = new javax.swing.GroupLayout(jPanel2); + jPanel2.setLayout(jPanel2Layout); + jPanel2Layout.setHorizontalGroup( + jPanel2Layout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING) + .addGroup(jPanel2Layout.createSequentialGroup() + .addContainerGap(javax.swing.GroupLayout.DEFAULT_SIZE, Short.MAX_VALUE) + .addComponent(buttonSetDelay) + .addContainerGap(javax.swing.GroupLayout.DEFAULT_SIZE, Short.MAX_VALUE)) + .addGroup(javax.swing.GroupLayout.Alignment.TRAILING, jPanel2Layout.createSequentialGroup() + .addContainerGap(javax.swing.GroupLayout.DEFAULT_SIZE, Short.MAX_VALUE) + .addComponent(jLabel2) + .addPreferredGap(javax.swing.LayoutStyle.ComponentPlacement.RELATED) + .addComponent(textOffset, javax.swing.GroupLayout.PREFERRED_SIZE, 69, javax.swing.GroupLayout.PREFERRED_SIZE) + .addContainerGap()) + ); + jPanel2Layout.setVerticalGroup( + jPanel2Layout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING) + .addGroup(jPanel2Layout.createSequentialGroup() + .addContainerGap() + .addGroup(jPanel2Layout.createParallelGroup(javax.swing.GroupLayout.Alignment.BASELINE) + .addComponent(jLabel2) + .addComponent(textOffset, javax.swing.GroupLayout.PREFERRED_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.PREFERRED_SIZE)) + .addPreferredGap(javax.swing.LayoutStyle.ComponentPlacement.UNRELATED) + .addComponent(buttonSetDelay) + .addContainerGap(javax.swing.GroupLayout.DEFAULT_SIZE, Short.MAX_VALUE)) + ); + javax.swing.GroupLayout layout = new javax.swing.GroupLayout(this); this.setLayout(layout); layout.setHorizontalGroup( @@ -277,7 +341,8 @@ public class GunEnergyScan extends Panel { .addGroup(layout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING, false) .addComponent(panelScanPars, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, Short.MAX_VALUE) .addComponent(panelBeamPars, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, Short.MAX_VALUE) - .addComponent(jPanel1, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, Short.MAX_VALUE)) + .addComponent(jPanel1, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, Short.MAX_VALUE) + .addComponent(jPanel2, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, Short.MAX_VALUE)) .addPreferredGap(javax.swing.LayoutStyle.ComponentPlacement.RELATED))) .addComponent(plot, javax.swing.GroupLayout.DEFAULT_SIZE, 528, Short.MAX_VALUE) .addContainerGap()) @@ -292,9 +357,11 @@ public class GunEnergyScan extends Panel { .addComponent(panelScanPars, javax.swing.GroupLayout.PREFERRED_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.PREFERRED_SIZE) .addPreferredGap(javax.swing.LayoutStyle.ComponentPlacement.RELATED) .addComponent(panelBeamPars, javax.swing.GroupLayout.PREFERRED_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.PREFERRED_SIZE) - .addPreferredGap(javax.swing.LayoutStyle.ComponentPlacement.UNRELATED) + .addPreferredGap(javax.swing.LayoutStyle.ComponentPlacement.RELATED) .addComponent(jPanel1, javax.swing.GroupLayout.PREFERRED_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.PREFERRED_SIZE) - .addPreferredGap(javax.swing.LayoutStyle.ComponentPlacement.RELATED, 12, Short.MAX_VALUE) + .addPreferredGap(javax.swing.LayoutStyle.ComponentPlacement.RELATED) + .addComponent(jPanel2, javax.swing.GroupLayout.PREFERRED_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.PREFERRED_SIZE) + .addPreferredGap(javax.swing.LayoutStyle.ComponentPlacement.RELATED, javax.swing.GroupLayout.DEFAULT_SIZE, Short.MAX_VALUE) .addGroup(layout.createParallelGroup(javax.swing.GroupLayout.Alignment.BASELINE) .addComponent(buttonStart) .addComponent(buttonAbort)))) @@ -314,17 +381,22 @@ public class GunEnergyScan extends Panel { parameters.add(spinnerLatency.getValue()); parameters.add((Double) spinnerDispersion.getValue()); parameters.add((Double) spinnerEnergy.getValue()); - parameters.add(plot); + parameters.add(plot); + parameters.add(spinnerThreshold.getValue()); try { runAsync("RFscan/GunEnergyScan", parameters).handle((ret, ex) -> { if (ex != null) { getLogger().info("Exception executing scan: " + ex); showException((Exception) ex); } else { + List list = (List)ret; try{ - double phase = ((Number)ret).doubleValue(); + double phase = ((Number)list.get(0)).doubleValue(); + double offset = ((Number)list.get(1)).doubleValue(); textRefPhase.setText(String.format("%1.2f",phase)); + textOffset.setText(String.format("%1.2f",offset)); buttonPhaseSet.setEnabled(true); + buttonSetDelay.setEnabled(true); } catch (Exception e) { showException(e); } @@ -354,7 +426,7 @@ public class GunEnergyScan extends Panel { parameters.add(plot); try { //How to get a callback on the end of execution - runAsync("RFscan/GunEnergyScanSet", parameters).handle((ret, ex) -> { + runAsync("RFscan/GunEnergyScanRfSet", parameters).handle((ret, ex) -> { if (ex != null) { getLogger().info("Exception executing scan: " + ex); showException((Exception) ex); @@ -370,15 +442,45 @@ public class GunEnergyScan extends Panel { } }//GEN-LAST:event_buttonPhaseSetActionPerformed + private void buttonSetDelayActionPerformed(java.awt.event.ActionEvent evt) {//GEN-FIRST:event_buttonSetDelayActionPerformed + try { + if (!textOffset.getText().isEmpty()){ + Double offset = Double.parseDouble(textOffset.getText()); + + ArrayList parameters = new ArrayList(); + parameters.add(offset); + parameters.add(plot); + try { + //How to get a callback on the end of execution + runAsync("RFscan/GunEnergyScanLasSet", parameters).handle((ret, ex) -> { + if (ex != null) { + getLogger().info("Exception executing scan: " + ex); + showException((Exception) ex); + } + return ret; + }); + } catch (Exception ex) { + showException(ex); + } + } + } catch (Exception ex) { + showException(ex); + } + }//GEN-LAST:event_buttonSetDelayActionPerformed + // Variables declaration - do not modify//GEN-BEGIN:variables private javax.swing.JButton buttonAbort; private javax.swing.JButton buttonPhaseSet; + private javax.swing.JButton buttonSetDelay; private javax.swing.JButton buttonStart; private javax.swing.JLabel jLabel1; + private javax.swing.JLabel jLabel2; private javax.swing.JPanel jPanel1; + private javax.swing.JPanel jPanel2; private javax.swing.JLabel labelDispersion; private javax.swing.JLabel labelEnergy; private javax.swing.JLabel labelLatency; + private javax.swing.JLabel labelLatency1; private javax.swing.JLabel labelSamples; private javax.swing.JLabel labelStart; private javax.swing.JLabel labelStep; @@ -393,6 +495,8 @@ public class GunEnergyScan extends Panel { private javax.swing.JSpinner spinnerStart; private javax.swing.JSpinner spinnerStep; private javax.swing.JSpinner spinnerStop; + private javax.swing.JSpinner spinnerThreshold; + private javax.swing.JTextField textOffset; private javax.swing.JTextField textRefPhase; // End of variables declaration//GEN-END:variables } diff --git a/plugins/ScreenPanel4.form b/plugins/ScreenPanel4.form new file mode 100644 index 0000000..4584b9c --- /dev/null +++ b/plugins/ScreenPanel4.form @@ -0,0 +1,1180 @@ + + +
+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + diff --git a/plugins/ScreenPanel4.java b/plugins/ScreenPanel4.java new file mode 100644 index 0000000..0324d98 --- /dev/null +++ b/plugins/ScreenPanel4.java @@ -0,0 +1,4218 @@ +/* + * Copyright (c) 2014 Paul Scherrer Institute. All rights reserved. + */ + +import ch.psi.pshell.bs.CameraServer; +import ch.psi.pshell.core.Context; +import java.io.IOException; +import java.nio.file.Paths; +import javax.swing.DefaultComboBoxModel; +import ch.psi.pshell.ui.Panel; +import ch.psi.pshell.imaging.ImageListener; +import ch.psi.utils.State; +import ch.psi.utils.Chrono; +import ch.psi.utils.swing.SwingUtils; +import ch.psi.utils.swing.TextEditor; +import ch.psi.pshell.bs.PipelineServer; +import ch.psi.pshell.bs.StreamValue; +import ch.psi.pshell.core.JsonSerializer; +import ch.psi.pshell.data.DataManager; +import ch.psi.pshell.device.Device; +import ch.psi.pshell.device.Readable.ReadableArray; +import ch.psi.pshell.device.Readable.ReadableNumber; +import ch.psi.pshell.device.ReadableRegister.ReadableRegisterArray; +import ch.psi.pshell.device.ReadableRegister.ReadableRegisterNumber; +import ch.psi.pshell.epics.ChannelInteger; +import ch.psi.pshell.epics.DiscretePositioner; +import ch.psi.pshell.epics.Epics; +import ch.psi.pshell.imaging.Colormap; +import ch.psi.pshell.imaging.ColormapSource; +import ch.psi.pshell.imaging.ColormapSource.ColormapSourceConfig; +import ch.psi.pshell.ui.App; +import ch.psi.pshell.imaging.Data; +import ch.psi.pshell.imaging.DimensionDouble; +import ch.psi.pshell.imaging.Histogram; +import ch.psi.pshell.imaging.ImageBuffer; +import ch.psi.pshell.imaging.Overlay; +import ch.psi.pshell.imaging.Overlays; +import ch.psi.pshell.imaging.Overlays.Text; +import ch.psi.pshell.imaging.Pen; +import ch.psi.pshell.imaging.PointDouble; +import ch.psi.pshell.imaging.Renderer; +import ch.psi.pshell.imaging.RendererListener; +import ch.psi.pshell.imaging.RendererMode; +import ch.psi.pshell.imaging.Source; +import ch.psi.pshell.scripting.InterpreterResult; +import ch.psi.pshell.scripting.ScriptManager; +import ch.psi.pshell.swing.DeviceValueChart; +import ch.psi.pshell.swing.ValueSelection; +import ch.psi.pshell.swing.ValueSelection.ValueSelectionListener; +import ch.psi.pshell.ui.Console; +import ch.psi.utils.Arr; +import ch.psi.utils.ArrayProperties; +import ch.psi.utils.Config; +import ch.psi.utils.Convert; +import ch.psi.utils.Str; +import ch.psi.utils.swing.Editor.EditorDialog; +import ch.psi.utils.swing.MainFrame; +import ch.psi.utils.swing.StandardDialog; +import ch.psi.utils.swing.StandardDialog.StandardDialogListener; +import ch.psi.utils.swing.SwingUtils.OptionResult; +import ch.psi.utils.swing.SwingUtils.OptionType; +import java.awt.Color; +import java.awt.Component; +import java.awt.Dimension; +import java.awt.Font; +import java.awt.GridBagConstraints; +import java.awt.GridBagLayout; +import java.awt.Point; +import java.awt.Rectangle; +import java.awt.Toolkit; +import java.awt.datatransfer.Clipboard; +import java.awt.datatransfer.StringSelection; +import java.awt.datatransfer.Transferable; +import java.awt.event.ActionEvent; +import java.awt.event.MouseAdapter; +import java.awt.event.MouseEvent; +import java.awt.event.WindowAdapter; +import java.awt.event.WindowEvent; +import java.awt.image.BufferedImage; +import java.io.File; +import java.io.FileInputStream; +import java.lang.reflect.Array; +import java.nio.file.Files; +import java.nio.file.Path; +import java.util.ArrayList; +import java.util.Arrays; +import java.util.Collections; +import java.util.HashMap; +import java.util.List; +import java.util.Map; +import java.util.Properties; +import java.util.logging.Level; +import java.util.logging.Logger; +import javax.swing.ImageIcon; +import javax.swing.JButton; +import javax.swing.JCheckBox; +import javax.swing.JCheckBoxMenuItem; +import javax.swing.JComboBox; +import javax.swing.JComponent; +import javax.swing.JDialog; +import javax.swing.JLabel; +import javax.swing.JMenu; +import javax.swing.JMenuItem; +import javax.swing.JPanel; +import javax.swing.JScrollPane; +import javax.swing.JSpinner; +import javax.swing.JTable; +import javax.swing.JTextField; +import javax.swing.ListSelectionModel; +import javax.swing.SwingUtilities; +import javax.swing.event.PopupMenuEvent; +import javax.swing.event.PopupMenuListener; +import javax.swing.table.DefaultTableModel; +import org.apache.commons.math3.analysis.function.Gaussian; +import org.apache.commons.math3.fitting.GaussianCurveFitter; +import org.apache.commons.math3.fitting.PolynomialCurveFitter; +import org.apache.commons.math3.fitting.WeightedObservedPoint; +import org.apache.commons.math3.stat.descriptive.DescriptiveStatistics; + +/** + * + */ +public class ScreenPanel4 extends Panel { + + public static final String LASER_TYPE = "Laser"; + public static final String ELECTRONS_TYPE = "Electrons"; + public static final String PHOTONICS_TYPE = "Photonics"; + + final String CAMERA_DEVICE_NAME = "CurrentCamera"; + boolean useServerStats = true; + String userOverlaysConfigFile; + ColormapSource camera; + PipelineServer server; + String cameraName; + int polling = 1000; + Overlay marker = null; + JDialog histogramDialog; + DiscretePositioner screen; + DiscretePositioner filter; + boolean showFit; + boolean showProfile; + Overlay[] userOv; + Overlay[] fitOv; + Overlay[] profileOv; + Overlay errorOverlay; + boolean requestCameraListUpdate; + boolean goodRegion; + boolean slicing; + String serverUrl; + String camServerUrl; + String instanceName; + Overlay titleOv = null; + int integration = 0; + boolean persistCameraState; + + public class CameraState extends Config { + + public boolean valid; + public boolean showSidePanel; + //public boolean showMarker; Saved in the stream instance config + public boolean showProfile; + public boolean showFit; + public boolean showReticle; + public boolean showScale; + public boolean showTitle; + public double zoom; + public RendererMode mode; + public boolean colormapAutomatic; + public double colormapMin; + public double colormapMax; + public Colormap colormap; + public boolean colormapLogarithmic; + + String getFile() { + if (camera == null) { + return null; + } + return getContext().getSetup().expandPath("{context}/screen_panel/" + cameraName + ".properties"); + } + } + + void loadCameraState() { + if (persistCameraState) { + try { + CameraState state = new CameraState(); + state.load(state.getFile()); + if (state.valid) { + buttonSidePanel.setSelected(state.showSidePanel); + buttonSidePanelActionPerformed(null); + buttonProfile.setSelected(state.showProfile); + buttonProfileActionPerformed(null); + buttonFit.setSelected(state.showFit); + buttonFitActionPerformed(null); + buttonReticle.setSelected(state.showReticle); + buttonReticleActionPerformed(null); + buttonScale.setSelected(state.showScale); + buttonScaleActionPerformed(null); + buttonTitle.setSelected(state.showTitle); + buttonTitleActionPerformed(null); + renderer.setMode(state.mode); + renderer.setZoom(state.zoom); + if (camera instanceof ColormapSource) { + camera.getConfig().colormap = state.colormap; + camera.getConfig().colormapAutomatic = state.colormapAutomatic; + camera.getConfig().colormapLogarithmic = state.colormapLogarithmic; + camera.getConfig().colormapMax = state.colormapMax; + camera.getConfig().colormapMin = state.colormapMin; + updateColormap(); + } + } + } catch (Exception ex) { + ex.printStackTrace(); + } + } + } + + void saveCameraState() { + if (persistCameraState) { + try { + CameraState state = new CameraState(); + state.valid = true; + if (camera instanceof ColormapSource) { + state.colormap = camera.getConfig().colormap; + state.colormapAutomatic = camera.getConfig().colormapAutomatic; + state.colormapLogarithmic = camera.getConfig().colormapLogarithmic; + state.colormapMax = camera.getConfig().colormapMax; + state.colormapMin = camera.getConfig().colormapMin; + } + state.mode = renderer.getMode(); + state.zoom = renderer.getZoom(); + + state.showSidePanel = buttonSidePanel.isSelected(); + state.showProfile = buttonProfile.isSelected(); + state.showFit = buttonFit.isSelected(); + state.showReticle = buttonReticle.isSelected(); + state.showScale = buttonScale.isSelected(); + state.showTitle = buttonTitle.isSelected(); + + state.save(state.getFile()); + } catch (Exception ex) { + ex.printStackTrace(); + } + } + } + + String pipelineSuffix = "_sp"; + + Double getServerDouble(String name) { + return (Double) Convert.toDouble(server.getValue(name)); + } + + double[] getServerDoubleArray(String name) { + return (double[]) Convert.toDouble(server.getValue(name)); + } + + Double getServerDouble(String name, StreamValue cache) { + return (Double) Convert.toDouble(cache.__getitem__(name)); + } + + double[] getServerDoubleArray(String name, StreamValue cache) { + return (double[]) Convert.toDouble(cache.__getitem__(name)); + } + + class ImageData { + + ImageData() { + if (server != null) { + cache = server.getStream().take(); + String prefix = goodRegion ? "gr_" : ""; + x_fit_mean = getServerDouble(prefix + "x_fit_mean", cache); + y_fit_mean = getServerDouble(prefix + "y_fit_mean", cache); + x_fit_standard_deviation = getServerDouble(prefix + "x_fit_standard_deviation", cache); + y_fit_standard_deviation = getServerDouble(prefix + "y_fit_standard_deviation", cache); + x_fit_gauss_function = getServerDoubleArray(prefix + "x_fit_gauss_function", cache); + y_fit_gauss_function = getServerDoubleArray(prefix + "y_fit_gauss_function", cache); + x_profile = getServerDoubleArray("x_profile", cache); + y_profile = getServerDoubleArray("y_profile", cache); + x_center_of_mass = getServerDouble("x_center_of_mass", cache); + y_center_of_mass = getServerDouble("y_center_of_mass", cache); + x_rms = getServerDouble("x_rms", cache); + y_rms = getServerDouble("y_rms", cache); + if (goodRegion) { + double[] gX2 = new double[x_profile.length]; + Arrays.fill(gX2, Double.NaN); + try { + double x = getServerDoubleArray("gr_x_axis", cache)[0]; + gr_size_x = x_fit_gauss_function.length; + gr_pos_x = (int) ((renderer.getCalibration() != null) ? renderer.getCalibration().convertToImageX(x) : x); + System.arraycopy(x_fit_gauss_function, 0, gX2, gr_pos_x, gr_size_x); + } catch (Exception ex) { + } + x_fit_gauss_function = gX2; + double[] gY2 = new double[y_profile.length]; + Arrays.fill(gY2, Double.NaN); + try { + double y = getServerDoubleArray("gr_y_axis", cache)[0]; + gr_size_y = y_fit_gauss_function.length; + gr_pos_y = (int) ((renderer.getCalibration() != null) ? renderer.getCalibration().convertToImageY(y) : y); + System.arraycopy(y_fit_gauss_function, 0, gY2, gr_pos_y, y_fit_gauss_function.length); + } catch (Exception ex) { + } + y_fit_gauss_function = gY2; + if (slicing) { + try { + int slices = getServerDouble("slice_amount").intValue(); + sliceCenters = new PointDouble[slices]; + for (int i = 0; i < slices; i++) { + double x = getServerDouble("slice_" + i + "_center_x"); + double y = getServerDouble("slice_" + i + "_center_y"); + sliceCenters[i] = new PointDouble(x, y); + } + } catch (Exception ex) { + } + } + } + } + } + public Double x_fit_mean; + public Double y_fit_mean; + public Double x_center_of_mass; + public Double x_rms; + public Double x_fit_standard_deviation; + public Double y_fit_standard_deviation; + public Double y_center_of_mass; + public Double y_rms; + public double[] x_profile; + public double[] x_fit_gauss_function; + public double[] y_profile; + public double[] y_fit_gauss_function; + public int gr_size_x; + public int gr_pos_x; + public int gr_size_y; + public int gr_pos_y; + public PointDouble[] sliceCenters; + public StreamValue cache; + } + + class Frame extends ImageData { + + Frame(Data data) { + this.data = data; + } + Data data; + } + + final ArrayList imageBuffer = new ArrayList(); + Frame currentFrame; + int imageBufferLenght = 1; + Text imagePauseOverlay; + final Console console; + + public ScreenPanel4() { + try { + initComponents(); + spinnerThreshold.setVisible(false); + btFixColormapRange.setVisible(false); + setGoodRegionOptionsVisible(false); + setSlicingOptionsVisible(false); + JComponent editor = spinnerSlOrientation.getEditor(); + if (editor instanceof JSpinner.DefaultEditor) { + ((JSpinner.DefaultEditor) editor).getTextField().setHorizontalAlignment(JTextField.RIGHT); + } + renderer.setPersistenceFile(Paths.get(getContext().getSetup().getContextPath(), "Renderer_Cameras.bin")); + //setPersistedComponents(new Component[]{buttonServer, buttonDirect}); + setPersistedComponents(new Component[]{buttonTitle}); + comboCameras.setEnabled(false); + comboType.setEnabled(false); + + SwingUtils.setEnumCombo(comboColormap, Colormap.class); + if (App.hasArgument("poll")) { + try { + polling = Integer.valueOf(App.getArgumentValue("poll")); + } catch (Exception ex) { + ex.printStackTrace(); + } + } + if (App.hasArgument("zoom")) { + try { + renderer.setDefaultZoom(Double.valueOf(App.getArgumentValue("zoom"))); + renderer.resetZoom(); + } catch (Exception ex) { + ex.printStackTrace(); + } + } + if (App.hasArgument("buf")) { + try { + imageBufferLenght = Integer.valueOf(App.getArgumentValue("buf")); + } catch (Exception ex) { + ex.printStackTrace(); + } + } + + if (App.hasArgument("usr_ov")) { + try { + userOverlaysConfigFile = App.getArgumentValue("usr_ov"); + } catch (Exception ex) { + ex.printStackTrace(); + } + } + + if (App.hasArgument("srv_url")) { + serverUrl = App.getArgumentValue("srv_url"); + } + + if (App.hasArgument("cam_srv_url")) { + camServerUrl = App.getArgumentValue("cam_srv_url"); + } + + if (App.hasArgument("calc")) { + useServerStats = false; + } + + if (App.hasArgument("persist")) { + persistCameraState = true; + } + + if (App.hasArgument("suffix")) { + pipelineSuffix = App.getArgumentValue("suffix"); + } + if (App.hasArgument("integration")) { + try { + setIntegration(Integer.valueOf(App.getArgumentValue("integration"))); + if (integration != 0) { + buttonFit.setSelected(false); + buttonProfile.setSelected(false); + } + } catch (Exception ex) { + ex.printStackTrace(); + } + } + + renderer.setProfileNormalized(true); + renderer.setShowProfileLimits(false); + + JMenuItem menuCalibrate = new JMenuItem("Calibrate..."); + menuCalibrate.addActionListener((ActionEvent e) -> { + try { + calibrate(); + } catch (Exception ex) { + showException(ex); + } + }); + + JMenuItem menuRendererConfig = new JMenuItem("Renderer Parameters"); + menuRendererConfig.addActionListener((ActionEvent e) -> { + try { + if (camera != null) { + this.showDeviceConfigDialog(camera, false); + } + } catch (Exception ex) { + showException(ex); + } + }); + + JMenuItem menuCameraConfig = new JMenuItem("Camera Configurarion"); + menuCameraConfig.addActionListener((ActionEvent e) -> { + try { + if (camera != null) { + String cameraConfigJson = null; + if (usingServer) { + String cameraServerUrl = (camServerUrl == null) ? server.getUrl().substring(0, server.getUrl().length() - 1) + "8" : camServerUrl; + try (CameraServer srv = new CameraServer("CamServer", cameraServerUrl)) { + srv.initialize(); + //TODO: replace into encodeMultiline + cameraConfigJson = JsonSerializer.encode(srv.getConfig(cameraName), true); + } + + } else { + String configFolder = (String) getContext().getClassByName("SfCamera").getMethod("getConfigFolder", new Class[]{}).invoke(null); + Path configFile = Paths.get(configFolder, cameraName + ".json"); + cameraConfigJson = configFile.toFile().exists() ? new String(Files.readAllBytes(configFile)) : null; + } + TextEditor configEditor = new TextEditor(); + configEditor.setText(cameraConfigJson); + configEditor.setReadOnly(true); + configEditor.setTitle(cameraName); + EditorDialog dlg = configEditor.getDialog(getTopLevel(), false); + dlg.setSize(480, 640); + dlg.setVisible(true); + SwingUtils.centerComponent(getTopLevel(), dlg); + } + } catch (Exception ex) { + showException(ex); + } + }); + + JMenuItem menuSetImageBufferSize = new JMenuItem("Set Stack Size..."); + menuSetImageBufferSize.addActionListener((ActionEvent e) -> { + try { + String ret = SwingUtils.getString(getTopLevel(), "Enter size of image buffer: ", String.valueOf(imageBufferLenght)); + if (ret != null) { + this.setImageBufferSize(Integer.valueOf(ret)); + } + } catch (Exception ex) { + showException(ex); + } + }); + + JMenuItem menuSaveStack = new JMenuItem("Save Stack"); + menuSaveStack.addActionListener((ActionEvent e) -> { + try { + saveStack(); + } catch (Exception ex) { + showException(ex); + } + }); + + JMenuItem menuSetROI = new JMenuItem("Set ROI..."); + menuSetROI.addActionListener((ActionEvent e) -> { + renderer.abortSelection(); + if (server != null) { + final Overlays.Rect selection = new Overlays.Rect(renderer.getPenMovingOverlay()); + renderer.addListener(new RendererListener() { + @Override + public void onSelectionFinished(Renderer renderer, Overlay overlay) { + try { + renderer.setShowReticle(false); + Rectangle roi = overlay.isFixed() ? renderer.toImageCoord(overlay.getBounds()) : overlay.getBounds(); + if (server.isRoiEnabled()) { + int[] cur = server.getRoi(); + server.setRoi(new int[]{roi.x + cur[0], roi.y + cur[1], roi.width, roi.height}); + } else { + server.setRoi(new int[]{roi.x, roi.y, roi.width, roi.height}); + } + } catch (Exception ex) { + } finally { + renderer.removeListener(this); + } + } + + @Override + public void onSelectionAborted(Renderer renderer, Overlay overlay) { + renderer.removeListener(this); + } + }); + selection.setFixed(true); + renderer.startSelection(selection); + } + }); + + JMenuItem menuResetROI = new JMenuItem("Reset ROI"); + menuResetROI.addActionListener((ActionEvent e) -> { + renderer.abortSelection(); + if (server != null) { + try { + renderer.setShowReticle(false); + server.resetRoi(); + } catch (IOException ex) { + showException(ex); + } + } + }); + + JCheckBoxMenuItem menuFrameIntegration = new JCheckBoxMenuItem("Multi-Frame", (integration != 0)); + menuFrameIntegration.addActionListener((ActionEvent e) -> { + if (integration == 0) { + JPanel panel = new JPanel(); + GridBagLayout layout = new GridBagLayout(); + layout.columnWidths = new int[]{150, 50}; //Minimum width + layout.rowHeights = new int[]{30, 30}; //Minimum height + panel.setLayout(layout); + JCheckBox checkContinuous = new JCheckBox(""); + checkContinuous.setSelected(true); + JTextField textFrames = new JTextField(); + GridBagConstraints c = new GridBagConstraints(); + c.gridx = 0; + c.gridy = 0; + panel.add(new JLabel("Number of frames:"), c); + c.gridy = 1; + panel.add(new JLabel("Continuous:"), c); + c.fill = GridBagConstraints.HORIZONTAL; + c.gridx = 1; + panel.add(checkContinuous, c); + c.gridy = 0; + panel.add(textFrames, c); + if (SwingUtils.showOption(getTopLevel(), "Multi-Frame Integration", panel, OptionType.OkCancel) == OptionResult.Yes) { + setIntegration(checkContinuous.isSelected() ? -(Integer.valueOf(textFrames.getText())) : (Integer.valueOf(textFrames.getText()))); + } + } else { + if (SwingUtils.showOption(getTopLevel(), "Multi-Frame Integration", + "Do you want to disable " + ((integration < 0) ? "continuous " : "") + "multi-frame integration (" + Math.abs(integration) + ")?", OptionType.YesNo) == OptionResult.Yes) { + setIntegration(0); + } + } + }); + + for (Component cmp : SwingUtils.getComponentsByType(renderer.getPopupMenu(), JMenu.class)) { + JMenu menu = (JMenu) cmp; + if (menu.getText().equals("Integration")) { + menu.addSeparator(); + menu.add(menuFrameIntegration); + } + } + renderer.getPopupMenu().addSeparator(); + renderer.getPopupMenu().add(menuRendererConfig); + renderer.getPopupMenu().add(menuCameraConfig); + renderer.getPopupMenu().add(menuSetImageBufferSize); + renderer.getPopupMenu().add(menuSaveStack); + renderer.getPopupMenu().addSeparator(); + renderer.getPopupMenu().add(menuCalibrate); + renderer.getPopupMenu().addSeparator(); + renderer.getPopupMenu().add(menuSetROI); + renderer.getPopupMenu().add(menuResetROI); + renderer.getPopupMenu().addPopupMenuListener(new PopupMenuListener() { + @Override + public void popupMenuWillBecomeVisible(PopupMenuEvent e) { + menuResetROI.setEnabled(server != null); + menuSetROI.setEnabled(server != null); + menuCalibrate.setVisible(server != null); + menuCalibrate.setEnabled((calibrationDialolg == null) || (!calibrationDialolg.isShowing())); + menuSaveStack.setEnabled(imageBufferLenght > 0); + menuSetImageBufferSize.setEnabled(!renderer.isPaused()); + menuFrameIntegration.setSelected(integration != 0); + } + + @Override + public void popupMenuWillBecomeInvisible(PopupMenuEvent e) { + } + + @Override + public void popupMenuCanceled(PopupMenuEvent e) { + } + }); + renderer.getPopupMenu().setVisible(false); + buttonScale.setSelected(renderer.getShowColormapScale()); + clearMarker(); + + showFit = buttonFit.isSelected(); + showProfile = buttonProfile.isSelected(); + + pauseSelection.setVisible(false); + pauseSelection.setMinValue(1); + pauseSelection.addListener(new ValueSelectionListener() { + @Override + public void onValueChanged(ValueSelection origin, double value, boolean editing) { + if (editing && (value >= 1) && (value <= imageBuffer.size())) { + updatePause(); + } + } + }); + renderer.addListener(new RendererListener() { + @Override + public void onMoveFinished(Renderer renderer, Overlay overlay) { + if (overlay == marker) { + try { + onMarkerChanged(); + } catch (IOException ex) { + Logger.getLogger(ScreenPanel4.class.getName()).log(Level.WARNING, null, ex); + } + } + } + }); + if (MainFrame.isDark()) { + textState.setDisabledTextColor(textState.getForeground()); + } + + } catch (Exception ex) { + ex.printStackTrace(); + } + + console = (!App.hasArgument("console")) ? null : new Console() { + /* + protected void onConsoleCommand(String name, String[] pars, String trimming) throws Exception { + switch (name) { + case "cam": + comboCameras.setSelectedItem(tokens[1]); + break; + } + }*/ + @Override + protected void onConsoleCommand(String command) { + String[] tokens = command.split(" "); + if ((tokens.length > 1) && tokens[0].equals("cam")) { + try { + if (!tokens[1].equals(comboCameras.getSelectedItem())) { + setComboTypeSelection("All"); + updateCameraList(); + comboCameras.setSelectedItem(tokens[1]); + if (!tokens[1].equals(comboCameras.getSelectedItem())) { + comboCameras.setSelectedItem(""); + throw new Exception("Invalid camera name : " + tokens[1]); + } + System.out.println("Console set camera: " + tokens[1]); + } + } catch (Exception ex) { + System.err.println(ex); + } + } else { + System.err.println("Invalid command: " + command); + } + } + }; + } + + void setIntegration(int frames) { + try { + if (integration != frames) { + integration = frames; + if (camera != null) { + if (Math.abs(integration) > 1) { + renderer.setDevice(new ImageIntegrator(integration)); + } else { + renderer.setDevice(camera); + } + synchronized (imageBuffer) { + currentFrame = null; + imageBuffer.clear(); + } + } + } + } catch (Exception ex) { + ex.printStackTrace(); + } + } + + @Override + public void onStart() { + super.onStart(); + updateDialogTitle(); + if (App.hasArgument("ct")) { + boolean direct = App.getArgumentValue("ct").equals("0") || App.getArgumentValue("ct").equalsIgnoreCase("false"); + buttonServer.setSelected(!direct); + buttonDirect.setSelected(direct); + } + if (App.hasArgument("console")) { + console.start(); + } + } + + @Override + public void onStop() { + try { + if (camera != null) { + saveCameraState(); + camera.close(); + camera = null; + server = null; + updateButtons(); + } + } catch (Exception ex) { + ex.printStackTrace(); + } + try { + if (console != null) { + console.stop(); + } + } catch (Exception ex) { + ex.printStackTrace(); + } + super.onStop(); + } + + //Overridable callbacks + @Override + public void onInitialize(int runCount) { + comboCameras.setEnabled(false); + comboType.setEnabled(false); + if (App.hasArgument("s")) { + renderer.setDevice((Source) getDevice("image")); + renderer.setAutoScroll(true); + ((Source) getDevice("image")).addListener(new ImageListener() { + @Override + public void onImage(Object o, BufferedImage bi, Data data) { + manageFit(bi, data); + manageUserOverlays(bi, data); + } + + @Override + public void onError(Object o, Exception ex) { + } + } + ); + + } else { + usingServer = buttonServer.isSelected(); + updateCameraList(); + comboCameras.setEnabled(true); + comboType.setEnabled(true); + setComboCameraSelection(null); + setComboTypeSelection("All"); + + if (comboCameras.getModel().getSize() > 0) { + try { + if (App.hasArgument("cam")) { + setComboCameraSelection(App.getArgumentValue("cam")); + comboCamerasActionPerformed(null); + } + } catch (Exception ex) { + ex.printStackTrace(); + } + } + } + updateButtons(); + startTimer(1000); + } + + boolean isVisible(String camera) { + return ((comboType.getSelectedIndex() == 0) || (getCameraType(camera).equals(comboType.getSelectedItem()))); + } + + DefaultComboBoxModel getCameraList(boolean fromServer) throws Exception { + DefaultComboBoxModel model = new DefaultComboBoxModel(); + if (fromServer) { + try (PipelineServer srv = newServer()) { + srv.initialize(); + List cameras = srv.getCameras(); + Collections.sort(cameras); + for (String camera : cameras) { + if (isVisible(camera)) { + model.addElement(camera); + } + } + } + + } else { + ArrayList cameras = (ArrayList) getContext().getClassByName("SfCamera").getMethod("getCameras", new Class[]{}).invoke(null); + for (String camera : cameras) { + if (isVisible(camera)) { + model.addElement(camera); + } + } + } + if (App.hasArgument("cam")) { + String camera = App.getArgumentValue("cam"); + if (model.getIndexOf(camera) < 0) { + if (isVisible(camera)) { + model.addElement(camera); + } + } + } + model.addElement(""); + + return model; + } + + PipelineServer newServer() throws IOException { + if (serverUrl != null) { + System.out.println("Connecting to server: " + serverUrl); + server = new PipelineServer(CAMERA_DEVICE_NAME, serverUrl); + } else { + System.out.println("Connecting to server"); + server = new PipelineServer(CAMERA_DEVICE_NAME); + } + updateButtons(); + return server; + } + + boolean updatingCameraSelection; + + void setComboCameraSelection(Object selection) { + updatingCameraSelection = true; + try { + comboCameras.setSelectedItem(selection); + } finally { + updatingCameraSelection = false; + } + } + + void setComboTypeSelection(Object selection) { + updatingCameraSelection = true; + try { + comboType.setSelectedItem(selection); + } finally { + updatingCameraSelection = false; + } + } + boolean usingServer; + + void updateCameraList() { + try { + String selected = (String) comboCameras.getSelectedItem(); + comboCameras.setModel(getCameraList(usingServer)); + if (selected != null) { + if (((DefaultComboBoxModel) comboCameras.getModel()).getIndexOf(camera) < 0) { + setComboCameraSelection(selected); + } + } + } catch (Exception ex) { + ex.printStackTrace(); + } finally { + updateButtons(); + } + } + + final Object lockOverlays = new Object(); + + void manageFit(BufferedImage bi, Data data) { + Overlay[][] fo = null; + if ((showFit || showProfile)) { + try { + fo = getFitOverlays(data); + } catch (Exception ex) { + System.err.println(ex); + } + } + synchronized (lockOverlays) { + fo = (fo == null) ? new Overlay[][]{null, null} : fo; + renderer.updateOverlays(fo[0], profileOv); + profileOv = fo[0]; + renderer.updateOverlays(fo[1], fitOv); + fitOv = fo[1]; + } + } + + void manageUserOverlays(BufferedImage bi, Data data) { + Overlay[] fo = (bi == null) ? null : getUserOverlays(data); + synchronized (lockOverlays) { + renderer.updateOverlays(fo, userOv); + userOv = fo; + } + } + + void updateDialogTitle() { + if (App.isDetached()) { + getTopLevel().setTitle(cameraName == null ? "ScreenPanel" : cameraName); + } + } + + void manageTitleOverlay() { + Overlay to = null; + if ((buttonTitle.isSelected()) && (cameraName != null)) { + Font font = new Font("Arial", Font.PLAIN, 28); + to = new Text(renderer.getPenErrorText(), cameraName, font, new Point(-SwingUtils.getTextSize(cameraName, renderer.getGraphics().getFontMetrics(font)).width - 14, 26)); + to.setFixed(true); + to.setAnchor(Overlay.ANCHOR_VIEWPORT_OR_IMAGE_TOP_RIGHT); + } + + synchronized (lockOverlays) { + renderer.updateOverlays(to, titleOv); + titleOv = to; + } + } + + @Override + public void onStateChange(State state, State former) { + + } + + @Override + public void onExecutedFile(String fileName, Object result) { + } + + //Callback to perform update - in event thread + @Override + protected void doUpdate() { + } + + Thread devicesInitTask; + + void setCamera(String cameraName) throws IOException, InterruptedException { + System.out.println("Initializing: " + cameraName); + parseUserOverlays(); + errorOverlay = null; + lastMarkerPos = null; + lastFrame = null; + lastPipelinePars = null; + + if (dataTableDialog != null) { + dataTableDialog.dispose(); + dataTableDialog = null; + } + dataTableModel = null; + + if (calibrationDialolg != null) { + calibrationDialolg.dispose(); + calibrationDialolg = null; + } + + boolean was_server = false; + if (camera != null) { + saveCameraState(); + //camera.removeAllListeners(); + was_server = (server != null); + camera.close(); + camera = null; + server = null; + } + updateButtons(); + instanceName = null; + renderer.setDevice(null); + renderer.setShowReticle(false); + renderer.removeOverlays(fitOv); + renderer.removeOverlays(profileOv); + renderer.removeOverlays(userOv); + renderer.clear(); + renderer.resetZoom(); + + boolean changed = !String.valueOf(cameraName).equals(this.cameraName); + this.cameraName = cameraName; + + if (changed || buttonDirect.isSelected()) { + spinnerThreshold.setVisible(false); + checkThreshold.setEnabled(false); + checkGoodRegion.setEnabled(false); + setGoodRegionOptionsVisible(false); + setSlicingOptionsVisible(false); + } + synchronized (imageBuffer) { + currentFrame = null; + imageBuffer.clear(); + } + if (changed) { + checkBackground.setEnabled(false); + if ((devicesInitTask != null) && (devicesInitTask.isAlive())) { + devicesInitTask.interrupt(); + } + if (screen != null) { + screen.close(); + screen = null; + } + if (filter != null) { + filter.close(); + filter = null; + } + if (renderer.isPaused()) { + renderer.resume(); + removePauseOverlay(); + pauseSelection.setVisible(false); + panelCameraSelection.setVisible(true); + } + } + manageTitleOverlay(); + updateDialogTitle(); + + if (cameraName == null) { + return; + } + + System.out.println("Setting camera: " + cameraName + " [" + (buttonServer.isSelected() ? "server" : "direct") + "]"); + try { + if (buttonServer.isSelected()) { + camera = newServer(); + camera.getConfig().flipHorizontally = false; + camera.getConfig().flipVertically = false; + camera.getConfig().rotation = 0.0; + camera.getConfig().roiX = 0; + camera.getConfig().roiY = 0; + camera.getConfig().roiWidth = -1; + camera.getConfig().roiHeight = -1; + } else { + //camera = new SfCamera(CAMERA_DEVICE_NAME, cameraName); + camera = (ColormapSource) getContext().getClassByName("SfCamera").getConstructor(new Class[]{String.class, String.class}).newInstance(new Object[]{CAMERA_DEVICE_NAME, cameraName}); + } + camera.initialize(); + camera.assertInitialized(); + System.out.println("Camera initialization OK"); + loadCameraState(); + if (server != null) { + //server.start(cameraName, false); + String pipelineName = cameraName + pipelineSuffix; + instanceName = cameraName + pipelineSuffix + "1"; + if (!server.getPipelines().contains(pipelineName)) { + System.out.println("Creating pipeline: " + pipelineName); + HashMap config = new HashMap<>(); + config.put("camera_name", cameraName); + //server.createFromConfig(config, pipelineName); + server.savePipelineConfig(pipelineName, config); + } + server.start(pipelineName, instanceName); + + updatePipelineControls(); + checkThreshold.setEnabled(true); + checkGoodRegion.setEnabled(true); + } else { + checkThreshold.setSelected(false); + checkGoodRegion.setSelected(false); + if (polling <= 0) { + camera.setMonitored(true); + } else { + camera.setPolling(polling); + } + camera.setBackgroundEnabled(checkBackground.isSelected()); + } + updateButtons(); + camera.getConfig().save(); + if (Math.abs(integration) > 1) { + renderer.setDevice(new ImageIntegrator(integration)); + } else { + renderer.setDevice(camera); + } + renderer.setAutoScroll(true); + //renderer.setMarker(marker); + clearMarker(); + imageSize = null; + + camera.addListener(new ImageListener() { + @Override + public void onImage(Object o, BufferedImage bi, Data data) { + if (bi != null) { + if ((imageSize == null) || imageSize.width != bi.getWidth() || imageSize.height != bi.getHeight()) { + SwingUtilities.invokeLater(new Runnable() { + @Override + public void run() { + if ((renderer.getMode() == RendererMode.Zoom) || (renderer.getMode() == RendererMode.Fixed)) { + centralizeRenderer(); + } + checkReticle(); + } + }); + imageSize = new Dimension(bi.getWidth(), bi.getHeight()); + } + renderer.setProfileSize(Math.min(bi.getWidth(), bi.getHeight())); + } + //renderer.setCalibration(camera.getCalibration()); + if (!renderer.isPaused()) { + if (data != null) { + synchronized (imageBuffer) { + currentFrame = new Frame(data); + if (imageBufferLenght >= 1) { + imageBuffer.add(currentFrame); + if (imageBuffer.size() > imageBufferLenght) { + imageBuffer.remove(0); + setBufferFull(true); + } else { + setBufferFull(false); + } + } else { + setBufferFull(true); + } + //Update data + if (!renderer.isPaused()) { + updateStreamData(); + } + updateMarker(); + } + } + manageFit(bi, data); + manageUserOverlays(bi, data); + } + //updateImageData(); + } + + @Override + public void onError(Object o, Exception ex) { + //System.err.println(ex); + } + }); + + } catch (Exception ex) { + showException(ex); + renderer.clearOverlays(); + updatePipelineControls(); + if (renderer.getDevice() == null) { + //renderer.setZoom(1.0); + //renderer.setMode(RendererMode.Zoom); + errorOverlay = new Text(renderer.getPenErrorText(), ex.toString(), new Font("Verdana", Font.PLAIN, 12), new Point(20, 20)); + errorOverlay.setFixed(true); + errorOverlay.setAnchor(Overlay.ANCHOR_VIEWPORT_TOP_LEFT); + renderer.addOverlay(errorOverlay); + } + } finally { + //checkReticle(); + onTimer(); + } + onChangeColormap(null); + checkBackground.setEnabled(true); + if (changed) { + boolean electrons = getCameraType(cameraName).equals(ELECTRONS_TYPE); + comboScreen.setModel(new DefaultComboBoxModel()); + comboScreen.setEnabled(false); + comboFilter.setModel(new DefaultComboBoxModel()); + comboFilter.setEnabled(false); + panelFilter.setVisible(electrons); + panelScreen.setVisible(electrons); + if (electrons) { + //Parallelizing initialization + devicesInitTask = new Thread(() -> { + try { + if (cameraName.contains("DSRM")) { + screen = new DiscretePositioner("CurrentScreen", cameraName + ":POSITION_SP", cameraName + ":POSITION"); + } else { + screen = new DiscretePositioner("CurrentScreen", cameraName + ":SET_SCREEN1_POS", cameraName + ":GET_SCREEN1_POS"); + } + screen.setMonitored(true); + screen.initialize(); + DefaultComboBoxModel model = new DefaultComboBoxModel(); + for (String pos : screen.getPositions()) { + model.addElement(pos); + } + comboScreen.setModel(model); + comboScreen.setSelectedItem(screen.read()); + + } catch (Exception ex) { + comboScreen.setModel(new DefaultComboBoxModel()); + System.err.println(ex.getMessage()); + screen = null; + } + comboScreen.setEnabled(screen != null); + valueScreen.setDevice(screen); + + try { + filter = new DiscretePositioner("CurrentFilter", cameraName + ":SET_FILTER", cameraName + ":GET_FILTER"); + filter.setMonitored(true); + filter.initialize(); + DefaultComboBoxModel model = new DefaultComboBoxModel(); + for (String pos : filter.getPositions()) { + model.addElement(pos); + } + comboFilter.setModel(model); + comboFilter.setSelectedItem(filter.read()); + } catch (Exception ex) { + System.err.println(ex.getMessage()); + filter = null; + } + comboFilter.setEnabled(filter != null); + valueFilter.setDevice(filter); + }); + devicesInitTask.start(); + } + } + } + + class ImageIntegrator extends ColormapSource { + + ImageIntegrator(int num) { + super("Image Averager", camera.getConfig()); + boolean continuous = (num < 0); + final int numImages = Math.abs(num); + + camera.addListener(new ImageListener() { + final ArrayList buffer = new ArrayList(); + Data integration = null; + + @Override + public void onImage(Object o, BufferedImage bi, Data data) { + try { + if (continuous) { + buffer.add(data); + if (buffer.size() >= numImages) { + for (Data d : buffer) { + process(d); + } + } + } else { + buffer.add(null); //Just to count + process(data); + } + } catch (Exception ex) { + buffer.clear(); + integration = null; + ImageIntegrator.this.pushData(null); + ex.printStackTrace(); + return; + } + if (buffer.size() >= numImages) { + if (continuous) { + buffer.remove(0); + } else { + buffer.clear(); + } + if (integration != null) { + //integration.div(numImages); + ImageIntegrator.this.pushData(integration); + } + integration = null; + } + } + + void process(Data data) { + if (integration == null) { + integration = new Data(data); + } else { + integration.sum(data); + } + } + + @Override + public void onError(Object origin, Exception ex) { + } + }); + + } + } + + boolean bufferFull = true; + + void setBufferFull(boolean value) { + if (value != bufferFull) { + SwingUtilities.invokeLater(() -> { + buttonPause.setBackground(value ? buttonSave.getBackground() : buttonSave.getBackground().brighter()); + }); + bufferFull = value; + } + } + + volatile Dimension imageSize; + + void checkReticle() { + if ((renderer.getDevice() != null) && (camera != null) && (camera.getConfig().isCalibrated()) && buttonReticle.isSelected()) { + //renderer.setCalibration(camera.getCalibration()); + renderer.configureReticle(new Dimension(800, 800), 200); + renderer.setShowReticle(true); + } else { + //renderer.setCalibration(null); + renderer.setShowReticle(false); + } + renderer.refresh(); + } + + void checkMarker(Point p) throws IOException { + if (camera != null) { + if (buttonMarker.isSelected()) { + Dimension d = renderer.getImageSize(); + if (p == null) { + p = (d == null) ? new Point(renderer.getWidth() / 2, renderer.getHeight() / 2) : new Point(d.width / 2, d.height / 2); + } + Overlay ov = null; + marker = new Overlays.Crosshairs(renderer.getPenMarker(), p, new Dimension(100, 100)); + marker.setMovable(true); + marker.setPassive(false); + } else { + marker = null; + } + renderer.setMarker(marker); + onMarkerChanged(); + } + } + + Point lastMarkerPos; + + void onMarkerChanged() throws IOException { + lastMarkerPos = getStreamMarkerPos(); + if (marker == null) { + setInstanceConfigValue("Marker", null); + } else { + setInstanceConfigValue("Marker", new int[]{marker.getPosition().x, marker.getPosition().y}); + } + } + + void updateMarker() { + try { + if (server != null) { + Point p = getStreamMarkerPos(); + if (p != null) { + //To prevent a local change being overriden by a message having the old settings. + //TODO: This is not bullet-proof, as one can have 2 changes between 2 frames... + if (!p.equals(lastMarkerPos)) { + if (p.x == Integer.MIN_VALUE) { + if (buttonMarker.isSelected()) { + buttonMarker.setSelected(false); + checkMarker(null); + } + } else { + if (!buttonMarker.isSelected()) { + buttonMarker.setSelected(true); + checkMarker(p); + } else { + if (!p.equals(marker.getPosition())) { + marker.setPosition(p); + } + } + } + } + } + } + } catch (Exception ex) { + ex.printStackTrace(); + } + } + + Point getStreamMarkerPos() throws IOException { + //System.out.println(server.getInstanceConfig().get("Marker")); + Map pars = server.getProcessingParameters(); + if (pars != null) { + List markerPosition = (List) pars.get("Marker"); + if (markerPosition != null) { + return new Point((Integer) markerPosition.get(0), (Integer) markerPosition.get(1)); + } + return new Point(Integer.MIN_VALUE, Integer.MIN_VALUE); + } + return null; + } + + void clearMarker() { + marker = null; + renderer.setMarker(marker); + } + + void setInstanceConfigValue(String name, Object value) throws IOException { + if (server != null) { + Map map = server.getInstanceConfig(); + map.put(name, value); + server.setInstanceConfig(map); + } + } + + void updateZoom() { + try { + buttonZoomStretch.setSelected(renderer.getMode() == RendererMode.Stretch); + buttonZoomFit.setSelected(renderer.getMode() == RendererMode.Fit); + if (renderer.getMode() == RendererMode.Fixed) { + buttonZoomNormal.setSelected(true); + } else if (renderer.getMode() == RendererMode.Zoom) { + if (renderer.getZoom() == 1) { + buttonZoomNormal.setSelected(true); + } else if (renderer.getZoom() == 0.5) { + buttonZoom05.setSelected(true); + } else if (renderer.getZoom() == 0.25) { + buttonZoom025.setSelected(true); + } else if (renderer.getZoom() == 2.0) { + buttonZoom2.setSelected(true); + } else { + buttonGroup1.clearSelection(); + } + } + } catch (Exception ex) { + ex.printStackTrace(); + } + } + + boolean updatingColormap; + + void updateColormap() { + updatingColormap = true; + try { + if ((camera != null) && (camera instanceof ColormapSource)) { + ColormapSourceConfig config = ((ColormapSource) camera).getConfig(); + comboColormap.setSelectedItem(config.colormap); + if (config.isDefaultColormap()) { + buttonFullRange.setSelected(true); + } else if (config.colormapAutomatic) { + buttonAutomatic.setSelected(true); + } else { + buttonManual.setSelected(true); + } + btFixColormapRange.setVisible(buttonAutomatic.isSelected()); + spinnerMin.setEnabled(buttonManual.isSelected()); + spinnerMax.setEnabled(buttonManual.isSelected()); + if (!Double.isNaN(config.colormapMin)) { + spinnerMin.setValue(Math.min(Math.max((int) config.colormapMin, 0), 65535)); + } + if (!Double.isNaN(config.colormapMax)) { + spinnerMax.setValue(Math.min(Math.max((int) config.colormapMax, 0), 65535)); + } + } + } catch (Exception ex) { + ex.printStackTrace(); + } + updatingColormap = false; + } + + void updatePipelineProperties() { + goodRegion = checkGoodRegion.isSelected(); + spinnerThreshold.setVisible(checkThreshold.isSelected()); + setGoodRegionOptionsVisible(goodRegion); + slicing = goodRegion && checkSlicing.isSelected(); + setSlicingOptionsVisible(slicing); + updatingServerControls = false; + } + + boolean updatingServerControls; + + void updatePipelineControls() { + if (server != null) { + updatingServerControls = true; + if (server.isStarted()) { + try { + checkBackground.setSelected(server.getBackgroundSubtraction()); + Double threshold = (server.getThreshold()); + checkThreshold.setSelected(threshold != null); + spinnerThreshold.setValue((threshold == null) ? 0 : threshold); + Map gr = (server.getGoodRegion()); + checkGoodRegion.setSelected(gr != null); + if (gr != null) { + spinnerGrThreshold.setValue(((Number) gr.get("threshold")).doubleValue()); + spinnerGrScale.setValue(((Number) gr.get("gfscale")).doubleValue()); + } + Map slicing = (server.getSlicing()); + checkSlicing.setSelected(slicing != null); + if (slicing != null) { + spinnerSlNumber.setValue(((Number) slicing.get("number_of_slices")).intValue()); + spinnerSlScale.setValue(((Number) slicing.get("scale")).doubleValue()); + spinnerSlOrientation.setValue((String) slicing.get("orientation")); + } + } catch (Exception ex) { + ex.printStackTrace(); + } + } + updatePipelineProperties(); + } + } + + boolean changedPipelinePars(Map pars1, Map pars2) { + String[] keys = new String[]{"image_background_enable", "image_threshold", "image_good_region", + "threshold", "gfscale", "image_slices", "number_of_slices", "scale", "orientation"}; + for (String key : keys) { + Object o1 = pars1.get(key); + Object o2 = pars2.get(key); + if (o1 == null) { + if (o2 != null) { + return true; + } + } else if (!o1.equals(o2)) { + return true; + } + } + return false; + } + + void updatePipelineControls(Map pars) { + if (pars != null) { + updatingServerControls = true; + try { + boolean background = (boolean) pars.get("image_background_enable"); + checkBackground.setSelected(background); + Double threshold = (Double) (pars.get("image_threshold")); + checkThreshold.setSelected(threshold != null); + spinnerThreshold.setValue((threshold == null) ? 0 : threshold); + Map gr = (Map) pars.get("image_good_region"); + checkGoodRegion.setSelected(gr != null); + if (gr != null) { + Double value = ((Number) gr.get("threshold")).doubleValue(); + spinnerGrThreshold.setValue(value); + Double scale = ((Number) gr.get("gfscale")).doubleValue(); + spinnerGrScale.setValue(scale); + } + Map slicing = (Map) (pars.get("image_slices")); + checkSlicing.setSelected(slicing != null); + if (slicing != null) { + int slices = ((Number) slicing.get("number_of_slices")).intValue(); + spinnerSlNumber.setValue(slices); + double scale = ((Number) slicing.get("scale")).doubleValue(); + spinnerSlScale.setValue(scale); + String orientation = (String) slicing.get("orientation"); + spinnerSlOrientation.setValue(orientation); + } + } catch (Exception ex) { + ex.printStackTrace(); + } + updatePipelineProperties(); + } + } + + void setGoodRegionOptionsVisible(boolean visible) { + spinnerGrThreshold.setVisible(visible); + labelGrThreshold.setVisible(visible); + spinnerGrScale.setVisible(visible); + labelGrScale.setVisible(visible); + panelSlicing.setVisible(visible); + } + + void setSlicingOptionsVisible(boolean visible) { + spinnerSlNumber.setVisible(visible); + labelSlNumber.setVisible(visible); + spinnerSlScale.setVisible(visible); + labelSlScale.setVisible(visible); + spinnerSlOrientation.setVisible(visible); + labelSlOrientation.setVisible(visible); + } + + boolean isCameraStopped() { + if ((server != null) && !server.isStarted()) { + return true; + } + return ((camera == null) || camera.isClosed()); + } + + boolean updatingButtons; + + void updateButtons() { + updatingButtons = true; + try { + boolean active = !isCameraStopped();//(camera != null); + buttonSave.setEnabled(active); + buttonGrabBackground.setEnabled(active); + buttonMarker.setEnabled(active); + buttonProfile.setEnabled(active); + buttonFit.setEnabled(active); + buttonReticle.setEnabled(active && camera.getConfig().isCalibrated()); + buttonStreamData.setEnabled(active && (server != null)); + buttonPause.setEnabled(active); + + if (renderer.isPaused() != buttonPause.isSelected()) { + buttonPause.setSelected(renderer.isPaused()); + buttonPauseActionPerformed(null); + } + if (renderer.getShowReticle() != buttonReticle.isSelected()) { + //buttonReticle.setSelected(renderer.getShowReticle()); + } + if ((renderer.getMarker() == null) && buttonMarker.isSelected()) { + buttonMarker.setSelected(false); + } + buttonSave.setSelected(renderer.isSnapshotDialogVisible()); + + } finally { + updatingButtons = false; + } + } + + Frame lastFrame = null; + Map lastPipelinePars = null; + + @Override + protected void onTimer() { + for (Device dev : new Device[]{screen, filter}) { + if (dev != null) { + dev.request(); + } + } + + textState.setText((camera == null) ? "" : camera.getState().toString()); + if (App.hasArgument("s")) { + try { + ((Source) getDevice("image")).initialize(); + } catch (IOException ex) { + Logger.getLogger(getClass().getName()).log(Level.SEVERE, null, ex); + } catch (InterruptedException ex) { + Logger.getLogger(getClass().getName()).log(Level.SEVERE, null, ex); + } + } + updateZoom(); + updateColormap(); + updateButtons(); + checkHistogram.setSelected((histogramDialog != null) && (histogramDialog.isShowing())); + buttonScale.setSelected(renderer.getShowColormapScale()); + try { + Frame frame = getCurrentFrame(); + if (frame != lastFrame) { + lastFrame = frame; + if (frame != null) { + Map pars = getProcessingParameters(frame.cache); + if ((lastPipelinePars == null) || changedPipelinePars(pars, lastPipelinePars)) { + //System.out.println("Update pipeline: " + pars); + lastPipelinePars = pars; + updatePipelineControls(pars); + } + } + } + } catch (Exception ex) { + ex.printStackTrace(); + } + } + + Pen penFit = new Pen(new Color(192, 105, 0), 0); + Pen penCross = new Pen(new Color(192, 105, 0), 0); + Pen penSlices = new Pen(Color.CYAN.darker(), 1); + + Frame getCurrentFrame() { + if ((imageBufferLenght > 1) && (renderer.isPaused())) { + int index = ((int) pauseSelection.getValue()) - 1; + synchronized (imageBuffer) { + return (index < imageBuffer.size()) ? imageBuffer.get(index) : null; + } + } + return currentFrame; + } + + Frame getFrame(Data data) { + synchronized (imageBuffer) { + for (Frame f : imageBuffer) { + if (f.data == data) { + return f; + } + } + } + return null; + } + + void setImageBufferSize(int size) { + if (renderer.isPaused()) { + throw new RuntimeException("Cannot change buffer size whn paused"); + } + synchronized (imageBuffer) { + imageBufferLenght = size; + imageBuffer.clear(); + } + + } + + Overlay[][] getFitOverlays(Data data) { + Overlays.Polyline hgaussian = null; + Overlays.Polyline vgaussian = null; + Overlays.Polyline hprofile = null; + Overlays.Polyline vprofile = null; + Double xMean = null, xSigma = null, xNorm = null, xCom = null, xRms = null; + Double yMean = null, ySigma = null, yNorm = null, yCom = null, yRms = null; + double[] pX = null, pY = null, gX = null, gY = null; + PointDouble[] sliceCenters = null; + if (data != null) { + int height = data.getHeight(); + int width = data.getWidth(); + int profileSize = renderer.getProfileSize(); + if ((useServerStats) && (server != null)) { + try { + + ImageData id = getFrame(data); + if (id == null) { + return null; + } + xMean = id.x_fit_mean; + xSigma = id.x_fit_standard_deviation; + yMean = id.y_fit_mean; + ySigma = id.y_fit_standard_deviation; + gX = id.x_fit_gauss_function; + gY = id.y_fit_gauss_function; + pX = id.x_profile; + pY = id.y_profile; + xCom = id.x_center_of_mass; + xRms = id.x_rms; + yCom = id.y_center_of_mass; + yRms = id.y_rms; + sliceCenters = id.sliceCenters; + + profileSize /= 4; + if (pX != null) { + int[] xp = Arr.indexesInt(pX.length); + int[] xg = xp; + int[] yp = new int[pX.length]; + int[] yg = new int[pX.length]; + + List l = Arrays.asList((Double[]) Convert.toWrapperArray(pX)); + double minProfile = Collections.min(l); + double maxProfile = Collections.max(l); + double rangeProfile = maxProfile - minProfile; + double minGauss = minProfile; + double rangeGauss = rangeProfile; + //If not good region, range of profile and fit are similar so save this calcultion + if (goodRegion && id.gr_size_x > 0) { + l = Arrays.asList((Double[]) Convert.toWrapperArray(Arrays.copyOfRange(gX, id.gr_pos_x, id.gr_pos_x + id.gr_size_x))); + minGauss = Collections.min(l); + rangeGauss = Collections.max(l) - minGauss; + } + + for (int i = 0; i < xp.length; i++) { + if (gX != null) { + yg[i] = (int) (height - 1 - (((gX[i] - minGauss) / rangeGauss) * profileSize)); + } + yp[i] = (int) (height - 1 - (((pX[i] - minProfile) / rangeProfile) * profileSize)); + } + + if (goodRegion && id.gr_size_x > 0) { + xg = Arrays.copyOfRange(xg, id.gr_pos_x, id.gr_pos_x + id.gr_size_x); + yg = Arrays.copyOfRange(yg, id.gr_pos_x, id.gr_pos_x + id.gr_size_x); + } + + vgaussian = new Overlays.Polyline(penFit, xg, yg); + vprofile = new Overlays.Polyline(renderer.getPenProfile(), xp, yp); + } + + if (pY != null) { + int[] xp = new int[pY.length]; + int[] xg = new int[pY.length]; + int[] yp = Arr.indexesInt(pY.length); + int[] yg = yp; + + List l = Arrays.asList((Double[]) Convert.toWrapperArray(pY)); + double minProfile = Collections.min(l); + double maxProfile = Collections.max(l); + double rangeProfile = maxProfile - minProfile; + double minGauss = minProfile; + double rangeGauss = rangeProfile; + //If not good region, range of profile and fit are similar so save this calcultion + if (goodRegion && id.gr_size_y > 0) { + l = Arrays.asList((Double[]) Convert.toWrapperArray(Arrays.copyOfRange(gY, id.gr_pos_y, id.gr_pos_y + id.gr_size_y))); + minGauss = Collections.min(l); + rangeGauss = Collections.max(l) - minGauss; + } + + for (int i = 0; i < xp.length; i++) { + if (gY != null) { + xg[i] = (int) (((gY[i] - minGauss) / rangeGauss) * profileSize); + } + xp[i] = (int) (((pY[i] - minProfile) / rangeProfile) * profileSize); + } + + if (goodRegion && id.gr_size_x > 0) { + xg = Arrays.copyOfRange(xg, id.gr_pos_y, id.gr_pos_y + id.gr_size_y); + yg = Arrays.copyOfRange(yg, id.gr_pos_y, id.gr_pos_y + id.gr_size_y); + } + hgaussian = new Overlays.Polyline(penFit, xg, yg); + hprofile = new Overlays.Polyline(renderer.getPenProfile(), xp, yp); + } + } catch (Exception ex) { + System.err.println(ex.getMessage()); + return null; + } + } else { + ArrayProperties properties = data.getProperties(); + double maxPlot = properties.max; + double minPlot = properties.min; + double rangePlot = maxPlot - minPlot; + + if (rangePlot <= 0) { + return null; + } + if (renderer.getCalibration() != null) { + try { + double[] sum = data.integrateVertically(true); + double[] saux = new double[sum.length]; + int[] p = new int[sum.length]; + double[] x_egu = renderer.getCalibration().getAxisX(sum.length); + double[] comRms = getComRms(sum, x_egu); + xCom = comRms[0]; + xRms = comRms[1]; + int[] x = Arr.indexesInt(sum.length); + DescriptiveStatistics stats = new DescriptiveStatistics(sum); + double min = stats.getMin(); + for (int i = 0; i < sum.length; i++) { + saux[i] = sum[i] - min; + } + if (showFit) { + double[] gaussian = fitGaussian(saux, x); + if (gaussian != null) { + if ((gaussian[2] < sum.length * 0.45) + && (gaussian[2] > 2) + && (gaussian[0] > min * 0.03)) { + xNorm = gaussian[0]; + xMean = gaussian[1]; + xSigma = gaussian[2]; + double[] fit = getFitFunction(gaussian, x); + int[] y = new int[x.length]; + for (int i = 0; i < x.length; i++) { + y[i] = (int) (height - 1 - ((((fit[i] + min) / height - minPlot) / rangePlot) * profileSize)); + } + vgaussian = new Overlays.Polyline(penFit, x, y); + } + } + } + if (showProfile) { + for (int i = 0; i < x.length; i++) { + p[i] = (int) (height - 1 - (((sum[i] / height - minPlot) / rangePlot) * profileSize)); + } + vprofile = new Overlays.Polyline(renderer.getPenProfile(), x, p); + } + } catch (Exception ex) { + ex.printStackTrace(); + } + + try { + double[] sum = data.integrateHorizontally(true); + double[] saux = new double[sum.length]; + int[] p = new int[sum.length]; + double[] y_egu = renderer.getCalibration().getAxisY(sum.length); + double[] comRms = getComRms(sum, y_egu); + yCom = comRms[0]; + yRms = comRms[1]; + int[] x = Arr.indexesInt(sum.length); + DescriptiveStatistics stats = new DescriptiveStatistics(sum); + double min = stats.getMin(); + for (int i = 0; i < sum.length; i++) { + saux[i] = sum[i] - min; + } + + if (showFit) { + double[] gaussian = fitGaussian(saux, x); + if (gaussian != null) { + //Only aknowledge beam fully inside the image and peak over 3% of min + if ((gaussian[2] < sum.length * 0.45) + && (gaussian[2] > 2) + && (gaussian[0] > min * 0.03)) { + yNorm = gaussian[0]; + yMean = gaussian[1]; + ySigma = gaussian[2]; + double[] fit = getFitFunction(gaussian, x); + + int[] y = new int[x.length]; + for (int i = 0; i < x.length; i++) { + y[i] = (int) ((((fit[i] + min) / width - minPlot) / rangePlot) * profileSize); + } + hgaussian = new Overlays.Polyline(penFit, y, x); + } + } + } + if (showProfile) { + for (int i = 0; i < x.length; i++) { + p[i] = (int) (((sum[i] / width - minPlot) / rangePlot) * profileSize); + } + hprofile = new Overlays.Polyline(renderer.getPenProfile(), p, x); + } + + } catch (Exception ex) { + ex.printStackTrace(); + } + if (xSigma != null) { + xSigma *= renderer.getCalibration().getScaleX(); + } + if (ySigma != null) { + ySigma *= renderer.getCalibration().getScaleY(); + } + if (xMean != null) { + xMean = data.getX((int) Math.round(xMean)); + } + if (yMean != null) { + yMean = data.getY((int) Math.round(yMean)); + } + } + } + final String units = (renderer.getCalibration() != null) ? "\u00B5m" : "px"; + final String fmt = "%7.1f" + units; + Overlays.Text textCom = null; + Overlay[] pOv = null, fOv = null; + Font fontInfoText = new Font(Font.MONOSPACED, 0, 14); + Point textPosition = new Point(12, 20); + if (showProfile) { + if ((xCom != null) && (yCom != null)) { + String text = String.format("com x: m=" + fmt + " \u03C3=" + fmt + "\ncom y: m=" + fmt + " \u03C3=" + fmt, xCom, xRms, yCom, yRms); + textCom = new Overlays.Text(renderer.getPenProfile(), text, fontInfoText, textPosition); + textCom.setFixed(true); + textCom.setAnchor(Overlay.ANCHOR_VIEWPORT_TOP_LEFT); + } + pOv = new Overlay[]{hprofile, vprofile, textCom}; + textPosition = new Point(textPosition.x, textPosition.y + 34); + } + if (showFit) { + Overlays.Crosshairs cross = null; + Overlays.Text textFit = null; + if ((xMean != null) && (yMean != null)) { + String text = String.format("fit x: m=" + fmt + " \u03C3=" + fmt + "\nfit y: m=" + fmt + " \u03C3=" + fmt, xMean, xSigma, yMean, ySigma); + textFit = new Overlays.Text(penFit, text, fontInfoText, textPosition); + textFit.setFixed(true); + textFit.setAnchor(Overlay.ANCHOR_VIEWPORT_TOP_LEFT); + Point center = new Point(xMean.intValue(), yMean.intValue()); + if (renderer.getCalibration() != null) { + center = renderer.getCalibration().convertToImagePosition(new PointDouble(xMean, yMean)); + xSigma /= renderer.getCalibration().getScaleX(); + ySigma /= renderer.getCalibration().getScaleY(); + } + cross = new Overlays.Crosshairs(penCross, center, new Dimension(Math.abs(2 * xSigma.intValue()), 2 * Math.abs(ySigma.intValue()))); + } + textPosition = new Point(textPosition.x, textPosition.y + 34); + fOv = new Overlay[]{hgaussian, vgaussian, cross, textFit}; + + if (goodRegion) { + try { + double[] x = getServerDoubleArray("gr_x_axis"); + double[] y = getServerDoubleArray("gr_y_axis"); + double x1 = x[0]; + double x2 = x[x.length - 1]; + double y1 = y[0]; + double y2 = y[y.length - 1]; + Overlays.Rect goodRegionOv = new Overlays.Rect(new Pen(penFit.getColor(), 0, Pen.LineStyle.dotted)); + goodRegionOv.setCalibration(renderer.getCalibration()); + goodRegionOv.setAbsolutePosition(new PointDouble(x1, y1)); + goodRegionOv.setAbsoluteSize(new DimensionDouble(x2 - x1, y2 - y1)); + fOv = Arr.append(fOv, goodRegionOv); + + if (slicing) { + if (sliceCenters != null) { + for (PointDouble sliceCenter : sliceCenters) { + Overlays.Crosshairs center = new Overlays.Crosshairs(penSlices); + center.setCalibration(renderer.getCalibration()); + center.setAbsolutePosition(sliceCenter); + center.setSize(new Dimension(10, 10)); + fOv = Arr.append(fOv, center); + } + if (sliceCenters.length > 1) { + double[] fit = fitPolynomial(sliceCenters, 1); + double angle = Math.toDegrees(Math.atan(fit[1])); + Overlays.Text text = new Overlays.Text(penSlices, String.format("slice: \u03B8= %5.1fdeg", angle), fontInfoText, textPosition); + text.setFixed(true); + text.setAnchor(Overlay.ANCHOR_VIEWPORT_TOP_LEFT); + fOv = Arr.append(fOv, text); + } + } + } + } catch (Exception ex) { + } + } + + } + return new Overlay[][]{pOv, fOv}; + } + return null; + } + + class UserOverlay { + + String name; + Overlay obj; + String[] channels; + } + ArrayList userOverlayConfig; + + void parseUserOverlays() { + Properties userOverlays = new Properties(); + userOverlayConfig = new ArrayList<>(); + if (userOverlaysConfigFile != null) { + try { + try (FileInputStream in = new FileInputStream(getContext().getSetup().expandPath(userOverlaysConfigFile))) { + userOverlays.load(in); + + for (String name : userOverlays.stringPropertyNames()) { + String val = userOverlays.getProperty(name); + try { + UserOverlay uo = new UserOverlay(); + uo.name = name; + String type = val.substring(0, val.indexOf("(")).trim(); + String pars = val.substring(val.indexOf("(") + 1, val.lastIndexOf(")")).trim(); + String[] tokens = pars.split(","); + for (int i = 0; i < tokens.length; i++) { + tokens[i] = tokens[i].trim(); + } + Color color = Color.GRAY; + try { + color = (Color) Color.class.getField(tokens[tokens.length - 1].toUpperCase()).get(null); + } catch (Exception ex) { + } + Pen pen = new Pen(color); + try { + String[] penTokens = tokens[tokens.length - 1].split(":"); + color = (Color) Color.class.getField(penTokens[0].toUpperCase()).get(null); + int width = Integer.valueOf(penTokens[1]); + Pen.LineStyle style = Pen.LineStyle.valueOf(penTokens[2]); + pen = new Pen(color, width, style); + } catch (Exception ex) { + } + switch (type) { + case "Point": + uo.obj = new Overlays.Crosshairs(); + uo.obj.setSize(new Dimension(Integer.valueOf(tokens[2]), Integer.valueOf(tokens[3]))); + break; + case "Line": + uo.obj = new Overlays.Line(); + break; + case "Arrow": + uo.obj = new Overlays.Arrow(); + break; + case "Rect": + uo.obj = new Overlays.Rect(); + break; + case "Ellipse": + uo.obj = new Overlays.Ellipse(); + break; + case "Polyline": + uo.obj = new Overlays.Polyline(); + break; + } + if (type.equals("Polyline") || type.equals("Point")) { + uo.channels = new String[]{tokens[0], tokens[1]}; + } else { + uo.channels = new String[]{tokens[0], tokens[1], tokens[2], tokens[3]}; + } + uo.obj.setPen(pen); + userOverlayConfig.add(uo); + } catch (Exception ex) { + ex.printStackTrace(); + } + } + } + } catch (Exception ex) { + ex.printStackTrace(); + } + } + } + + Overlay[] getUserOverlays(Data data) { + ArrayList ret = new ArrayList<>(); + if (server != null) { + for (UserOverlay uo : userOverlayConfig) { + try { + Overlay ov = uo.obj; + //Overlay ov = (Overlay)uo.cls.newInstance(); + ov.setCalibration(renderer.getCalibration()); + boolean valid = false; + if (ov instanceof Overlays.Polyline) { + double[] x = (uo.channels[0].equals("null")) ? null : getServerDoubleArray(uo.channels[0]); + double[] y = (uo.channels[1].equals("null")) ? null : getServerDoubleArray(uo.channels[1]); + if ((x != null) || (y != null)) { + if (x == null) { + x = (renderer.getCalibration() == null) ? Arr.indexesDouble(y.length) : renderer.getCalibration().getAxisX(y.length); + } + if (y == null) { + y = (renderer.getCalibration() == null) ? Arr.indexesDouble(x.length) : renderer.getCalibration().getAxisY(x.length); + } + ((Overlays.Polyline) ov).updateAbsolute(x, y); + valid = true; + } + } else { + Double x = getServerDouble(uo.channels[0]); + Double y = getServerDouble(uo.channels[1]); + if ((x != null) && (y != null)) { + PointDouble position = new PointDouble(x, y); + ov.setAbsolutePosition(position); + if (!(ov instanceof Overlays.Crosshairs)) { + Double x2 = getServerDouble(uo.channels[2]); + Double y2 = getServerDouble(uo.channels[3]); + if ((x != null) && (y != null)) { + DimensionDouble size = new DimensionDouble(x2 - position.x, y2 - position.y); + ov.setAbsoluteSize(size); + valid = true; + } + } else { + valid = true; + } + } + } + if (valid) { + ret.add(ov); + } + } catch (Exception ex) { + //ex.printStackTrace(); + } + } + } + return ret.toArray(new Overlay[0]); + } + + double[] getComRms(double[] arr, double[] x) { + if (arr != null) { + double xmd = 0; + double xmd2 = 0; + double total = 0; + for (int i = 0; i < arr.length; i++) { + double v = (arr[i] * x[i]); + xmd += v; + xmd2 += (v * x[i]); + total += arr[i]; + } + if (total > 0) { + double com = xmd / total; + double com2 = xmd2 / total; + double rms = Math.sqrt(Math.abs(com2 - com * com)); + return new double[]{com, rms}; + } + } + return new double[]{Double.NaN, Double.NaN}; + } + + double[] fitGaussianScript(int[] y, int[] x) { + ScriptManager sm = Context.getInstance().getScriptManager(); + ArrayProperties pY = ArrayProperties.get(y); + sm.setVar("y", y); + sm.setVar("x", x); + InterpreterResult r = sm.eval("r = fit_gaussians(y, x, [" + pY.maxIndex + ",])"); + if (r.exception != null) { + r.exception.printStackTrace(); + } else { + List ret = (List) sm.getVar("r"); + if ((ret != null) && (ret.size() == 1) && (ret.get(0) instanceof List) && (((List) (ret.get(0))).size() == 3)) { + double norm = (Double) ((List) ret.get(0)).get(0); + double mean = (Double) ((List) ret.get(0)).get(1); + double sigma = (Double) ((List) ret.get(0)).get(2); + return new double[]{norm, mean, sigma}; + } + } + return null; + } + + double[] fitGaussian(double[] y, int[] x) { + try { + ArrayProperties pY = ArrayProperties.get(y); + GaussianCurveFitter fitter = GaussianCurveFitter.create().withStartPoint(new double[]{(pY.max - pY.min) / 2, x[pY.maxIndex], 1.0}).withMaxIterations(1000); + ArrayList values = new ArrayList<>(); + for (int i = 0; i < y.length; i++) { + values.add(new WeightedObservedPoint(1.0, x[i], y[i])); + } + return fitter.fit(values); + } catch (Exception ex) { + return null; + } + + } + + double[] fitPolynomial(PointDouble[] points, int order) { + double[] y = new double[points.length]; + double[] x = new double[points.length]; + for (int i = 0; i < points.length; i++) { + x[i] = points[i].x; + y[i] = points[i].y; + } + return fitPolynomial(y, x, order); + } + + double[] fitPolynomial(double[] y, double[] x, int order) { + try { + ArrayProperties pY = ArrayProperties.get(y); + PolynomialCurveFitter fitter = PolynomialCurveFitter.create(order).withMaxIterations(1000); + ArrayList values = new ArrayList<>(); + for (int i = 0; i < y.length; i++) { + values.add(new WeightedObservedPoint(1.0, x[i], y[i])); + } + return fitter.fit(values); + } catch (Exception ex) { + return null; + } + + } + + double[] getFitFunction(double[] pars, int[] x) { + double[] fit = new double[x.length]; + Gaussian g = new Gaussian(pars[0], pars[1], pars[2]); + for (int i = 0; i < x.length; i++) { + fit[i] = g.value(x[i]); + } + return fit; + } + + void setHistogramVisible(boolean value) { + if (value) { + if ((histogramDialog == null) || (!histogramDialog.isShowing())) { + Histogram histogram = new Histogram(true); + histogram.setRenderer(renderer); + histogramDialog = SwingUtils.showDialog(SwingUtils.getWindow(renderer), "Histogram", null, histogram); + renderer.refresh(); + } + } else { + if (histogramDialog != null) { + histogramDialog.setVisible(false); + histogramDialog = null; + } + } + } + + void setLaserState(boolean value) throws Exception { + System.out.println("Setting laser state: " + value); + Epics.putq("SIN-TIMAST-TMA:Beam-Las-Delay-Sel", value ? 0 : 1); + Epics.putq("SIN-TIMAST-TMA:Beam-Apply-Cmd.PROC", 1); + Thread.sleep(3000); + } + + boolean getLaserState() throws Exception { + return (Epics.get("SIN-TIMAST-TMA:Beam-Las-Delay-Sel", Integer.class) == 0); + } + + void elog(String logbook, String title, String message, String[] attachments) throws Exception { + String domain = ""; + String category = "Info"; + String entry = ""; + StringBuffer cmd = new StringBuffer(); + + cmd.append("G_CS_ELOG_add -l \"").append(logbook).append("\" "); + cmd.append("-a \"Author=ScreenPanel\" "); + cmd.append("-a \"Type=pshell\" "); + cmd.append("-a \"Entry=").append(entry).append("\" "); + cmd.append("-a \"Title=").append(title).append("\" "); + cmd.append("-a \"Category=").append(category).append("\" "); + cmd.append("-a \"Domain=").append(domain).append("\" "); + for (String attachment : attachments) { + cmd.append("-f \"").append(attachment).append("\" "); + } + cmd.append("-n 1 "); + cmd.append("\"").append(message).append("\" "); + System.out.println(cmd.toString()); + + final Process process = Runtime.getRuntime().exec(new String[]{"bash", "-c", cmd.toString()}); + new Thread(() -> { + try { + process.waitFor(); + int bytes = process.getInputStream().available(); + byte[] arr = new byte[bytes]; + process.getInputStream().read(arr, 0, bytes); + System.out.println(new String(arr)); + bytes = process.getErrorStream().available(); + arr = new byte[bytes]; + process.getErrorStream().read(arr, 0, bytes); + System.err.println(new String(arr)); + } catch (Exception ex) { + System.err.println(ex); + } + }).start(); + } + + void centralizeRenderer() { + Point center = null; + Dimension size = renderer.getImageSize(); + double zoom = (renderer.getMode() == RendererMode.Fixed) ? 1.0 : renderer.getZoom(); + if (renderer.getCalibration() != null) { + center = renderer.getCalibration().getCenter(); + } else if (size != null) { + center = new Point(size.width / 2, size.height / 2); + } + if (center != null) { + Point topleft = new Point(Math.max((int) (center.x - renderer.getWidth() / 2 / zoom), 0), + Math.max((int) (center.y - renderer.getHeight() / 2 / zoom), 0)); + renderer.setViewPosition(topleft); + } + } + + void updatePause() { + int index = ((int) pauseSelection.getValue()) - 1; + synchronized (imageBuffer) { + if (index < imageBuffer.size()) { + Data data = imageBuffer.get(index).data; + long pid = imageBuffer.get(index).cache.getPulseId(); + BufferedImage image = camera.generateImage(data); + renderer.setImage(renderer.getOrigin(), image, data); + + String text = "PID: " + pid; + if (imagePauseOverlay == null) { + Font font = new Font("Verdana", Font.PLAIN, 12); + Dimension d = SwingUtils.getTextSize(text, renderer.getFontMetrics(font)); + imagePauseOverlay = new Text(renderer.getPenErrorText(), "", font, new Point(-20 - d.width, 42)); + imagePauseOverlay.setFixed(true); + imagePauseOverlay.setAnchor(Overlay.ANCHOR_VIEWPORT_OR_IMAGE_TOP_RIGHT); + renderer.addOverlay(imagePauseOverlay); + } + //imagePauseOverlay.update(Chrono.getTimeStr(data.getTimestamp(), "HH:mm:ss.SSS")); + imagePauseOverlay.update(text); + manageFit(image, data); + manageUserOverlays(image, data); + } + } + updateStreamData(); + } + + void removePauseOverlay() { + renderer.removeOverlay(imagePauseOverlay); + imagePauseOverlay = null; + } + + void saveSnapshot() throws Exception { + boolean paused = isPaused(); + try{ + if (!paused){ + setPaused(true); + } + String snapshotFile = null; + synchronized (imageBuffer) { + Frame frame = getCurrentFrame(); + if (frame == null) { + throw new Exception("No current image"); + } + ArrayList frames = new ArrayList<>(); + frames.add(frame); + this.saveFrames(cameraName + "_camera_snapshot", frames); + + //Enforce the same timestamp to data & image files. + snapshotFile = getContext().getExecutionPars().getPath() + ".png"; + //renderer.saveSnapshot(snapshotFile, "png", true); + ImageBuffer.saveImage(SwingUtils.createImage(renderer), snapshotFile, "png"); + } + + JPanel panel = new JPanel(); + GridBagLayout layout = new GridBagLayout(); + layout.columnWidths = new int[]{0, 180}; //Minimum width + layout.rowHeights = new int[]{30, 30, 30}; //Minimum height + panel.setLayout(layout); + JComboBox comboLogbook = new JComboBox(new String[]{"SwissFEL commissioning data", "SwissFEL commissioning"}); + JTextField textComment = new JTextField(); + GridBagConstraints c = new GridBagConstraints(); + c.gridx = 0; + c.gridy = 0; + panel.add(new JLabel("Data file:"), c); + c.gridy = 1; + panel.add(new JLabel("Logbook:"), c); + c.gridy = 2; + panel.add(new JLabel("Comment:"), c); + c.fill = GridBagConstraints.HORIZONTAL; + c.gridx = 1; + panel.add(textComment, c); + c.gridy = 1; + panel.add(comboLogbook, c); + c.gridy = 0; + panel.add(new JLabel(getContext().getExecutionPars().getPath()), c); + + if (SwingUtils.showOption(getTopLevel(), "Success", panel, OptionType.OkCancel) == OptionResult.Yes) { + StringBuilder message = new StringBuilder(); + message.append("Camera: ").append(cameraName).append(" ("). + append((server != null) ? "server" : "direct").append(")").append("\n"); + message.append("Screen: ").append(String.valueOf(valueScreen.getLabel().getText())).append("\n"); + message.append("Filter: ").append(String.valueOf(valueFilter.getLabel().getText())).append("\n"); + message.append("Data file: ").append(getContext().getExecutionPars().getPath()).append("\n"); + message.append("Comment: ").append(textComment.getText()).append("\n"); + //Add slicing message + if ((fitOv != null) && (fitOv.length > 5) && (fitOv[fitOv.length - 1] instanceof Overlays.Text)) { + Overlays.Text text = (Overlays.Text) fitOv[fitOv.length - 1]; + message.append(text.getText()).append("\n"); + } + elog((String) comboLogbook.getSelectedItem(), "ScreenPanel Snapshot", message.toString(), new String[]{snapshotFile}); + } + } finally{ + if (!paused){ + setPaused(false); + } + } + } + + void saveStack() throws Exception { + synchronized (imageBuffer) { + saveFrames(cameraName + "_camera_stack", imageBuffer); + } + SwingUtils.showMessage(getTopLevel(), "Success", "Generated data file:\n" + getContext().getExecutionPars().getPath()); + } + + public static String getCameraType(String name) { + if (name == null) { + return ""; + } + for (String s : new String[]{"LCAM"}) { + if (name.contains(s)) { + return LASER_TYPE; + } + } + for (String s : new String[]{"DSCR", "DSRM", "DLAC"}) { + if (name.contains(s)) { + return ELECTRONS_TYPE; + } + } + for (String s : new String[]{"PROF", "PPRM", "PSSS", "PSCR", "PSRD"}) { + if (name.contains(s)) { + return PHOTONICS_TYPE; + } + } + return "Unknown"; + } + + public Map getProcessingParameters(StreamValue value) throws IOException { + return (Map) JsonSerializer.decode(value.getValue("processing_parameters").toString(), Map.class); + } + + void saveFrames(String name, ArrayList frames) throws IOException { + ArrayList values = new ArrayList<>(); + for (Frame frame : frames) { + values.add(frame.cache); + } + saveImages(name, values); + } + + void saveImages(String name, ArrayList images) throws IOException { + int depth = images.size(); + if (depth == 0) { + return; + } + StreamValue first = images.get(0); + String pathRoot = "/camera1/"; + String pathImage = pathRoot + "image"; + String pathPid = pathRoot + "pulse_id"; + String pathTimestampStr = pathRoot + "timestamp_str"; + Map processingPars = getProcessingParameters(first); + String camera = (String) processingPars.get("camera_name"); + String type = getCameraType(camera); + + int width = ((Number) first.getValue("width")).intValue(); + int height = ((Number) first.getValue("height")).intValue(); + Class dataType = first.getValue("image").getClass().getComponentType(); + + getContext().setExecutionPars(name); + DataManager dm = getContext().getDataManager(); + + //Create tables + dm.createDataset(pathImage, dataType, new int[]{depth, height, width}); + dm.createDataset(pathPid, Long.class, new int[]{depth}); + dm.createDataset(pathTimestampStr, String.class, new int[]{depth}); + for (String id : first.getIdentifiers()) { + Object val = first.getValue(id); + if (id.equals("image")) { + } else if (id.equals("processing_parameters")) { + Map pars = getProcessingParameters(first); + for (String key : pars.keySet()) { + if ((pars.get(key) != null) && (pars.get(key) instanceof Map)) { + for (Object k : ((Map) pars.get(key)).keySet()) { + Object v = ((Map) pars.get(key)).get(k); + dm.setAttribute(pathImage, key + " " + k, (v == null) ? "" : v); + } + } else { + Object value = pars.get(key); + if (value == null) { + value = ""; + } else if (value instanceof List) { + Class cls = (((List) value).size() > 0) ? ((List) value).get(0).getClass() : double.class; + value = Convert.toPrimitiveArray(value, cls); + //value = Convert.toDouble(value); + } + dm.setAttribute(pathImage, key, value); + } + } + } else if (val.getClass().isArray()) { + dm.createDataset(pathRoot + id, Double.class, new int[]{depth, Array.getLength(val)}); + } else { + dm.createDataset(pathRoot + id, val.getClass(), new int[]{depth}); + } + } + + //Add metadata + dm.setAttribute(pathRoot, "Camera", camera); + dm.setAttribute(pathRoot, "Images", depth); + dm.setAttribute(pathRoot, "Interval", -1); + dm.setAttribute(pathRoot, "Type", type); + if (type.equals(ELECTRONS_TYPE)) { + dm.setAttribute(pathRoot, "Screen", String.valueOf(valueScreen.getLabel().getText())); + dm.setAttribute(pathRoot, "Filter", String.valueOf(valueFilter.getLabel().getText())); + } + + //Save data + for (int index = 0; index < depth; index++) { + StreamValue streamValue = images.get(index); + dm.setItem(pathImage, streamValue.getValue("image"), new long[]{index, 0, 0}, new int[]{1, height, width}); + dm.setItem(pathPid, streamValue.getPulseId(), index); + dm.setItem(pathTimestampStr, Chrono.getTimeStr(streamValue.getTimestamp(), "YYYY-MM-dd HH:mm:ss.SSS"), index); + + for (String id : streamValue.getIdentifiers()) { + Object val = streamValue.getValue(id); + if (id.equals("image")) { + } else if (id.equals("processing_parameters")) { + } else if (val.getClass().isArray()) { + dm.setItem(pathRoot + id, val, index); + } else { + dm.setItem(pathRoot + id, val, index); + } + } + } + getContext().getDataManager().closeOutput(); + } + + StandardDialog calibrationDialolg; + + void calibrate() throws Exception { + if (server != null) { + server.resetRoi(); + calibrationDialolg = (StandardDialog) getContext().getClassByName("CameraCalibrationDialog").getConstructors()[0].newInstance(new Object[]{getTopLevel(), server.getCurrentCamera(), renderer}); + SwingUtils.centerComponent(getTopLevel(), calibrationDialolg); + calibrationDialolg.setVisible(true); + calibrationDialolg.setListener(new StandardDialogListener() { + @Override + public void onWindowOpened(StandardDialog dlg) { + } + + @Override + public void onWindowClosed(StandardDialog dlg, boolean accepted) { + if (accepted) { + //comboCamerasActionPerformed(null); + } + } + }); + } + } + + StandardDialog dataTableDialog; + DefaultTableModel dataTableModel; + JTable dataTable; + + void showStreamData() { + dataTableModel = null; + if (server != null) { + + if ((dataTableDialog != null) && (dataTableDialog.isShowing())) { + SwingUtils.centerComponent(getTopLevel(), dataTableDialog); + dataTableDialog.requestFocus(); + return; + } + dataTableModel = new DefaultTableModel(new Object[0][2], new String[]{"Name", "Value"}) { + public Class getColumnClass(int columnIndex) { + return String.class; + } + + public boolean isCellEditable(int rowIndex, int columnIndex) { + return false; + } + }; + updateStreamData(); + StreamValue val = server.getStream().take(); + dataTable = new JTable(dataTableModel); + dataTable.setSelectionMode(ListSelectionModel.SINGLE_INTERVAL_SELECTION); + dataTable.setCellSelectionEnabled(true); + dataTable.getTableHeader().setReorderingAllowed(false); + dataTable.getTableHeader().setResizingAllowed(true); + dataTableDialog = new StandardDialog(getTopLevel(), "Image Data", false); + dataTableDialog.setDefaultCloseOperation(JDialog.DISPOSE_ON_CLOSE); + JScrollPane scrollPane = new JScrollPane(); + scrollPane.setViewportView(dataTable); + scrollPane.setPreferredSize(new Dimension(300, 400)); + dataTableDialog.setContentPane(scrollPane); + dataTableDialog.pack(); + dataTableDialog.setVisible(true); + dataTableDialog.addWindowListener(new WindowAdapter() { + @Override + public void windowClosing(WindowEvent e) { + dataTableModel = null; + } + }); + dataTable.addMouseListener(new MouseAdapter() { + @Override + public void mouseClicked(MouseEvent e) { + try { + int row = dataTable.getSelectedRow(); + int col = dataTable.getSelectedColumn(); + dataTable.setToolTipText(null); + if (row > 1) { + String id = String.valueOf(dataTable.getModel().getValueAt(row, 0)); + String locator = String.valueOf(dataTable.getModel().getValueAt(0, 1)); + String channelId = locator + " " + id; + dataTable.setToolTipText(channelId); + if ((e.getClickCount() == 2) && (!e.isPopupTrigger())) { + if (col == 0) { + SwingUtils.showMessage(dataTableDialog, "Channel Identifier", "Copied to clipboard: " + channelId); + Clipboard clipboard = Toolkit.getDefaultToolkit().getSystemClipboard(); + clipboard.setContents(new StringSelection(channelId), (Clipboard clipboard1, Transferable contents) -> { + }); + } else { + Object obj = getCurrentFrame().cache.getValue(id); + if (id.equals("image")) { + } else if (id.equals("processing_parameters")) { + Map pars = getProcessingParameters(getCurrentFrame().cache); + StringBuilder sb = new StringBuilder(); + for (String key : pars.keySet()) { + sb.append(key).append(" = ").append(Str.toString(pars.get(key), 10)).append("\n"); + } + SwingUtils.showMessage(dataTableDialog, "Processing Parameters", sb.toString()); + } else if ((obj != null) && (obj.getClass().isArray() || (obj instanceof Number))) { + DeviceValueChart chart = new DeviceValueChart(); + Device dev = null; + if (obj.getClass().isArray()) { + dev = new ReadableRegisterArray(new ReadableArray() { + @Override + public Object read() throws IOException, InterruptedException { + return Convert.toDouble(getCurrentFrame().cache.getValue(id)); + } + + @Override + public int getSize() { + return Array.getLength(getCurrentFrame().cache.getValue(id)); + } + }); + } else { + dev = new ReadableRegisterNumber(new ReadableNumber() { + @Override + public Object read() throws IOException, InterruptedException { + return Convert.toDouble(getCurrentFrame().cache.getValue(id)); + } + }); + } + dev.setPolling(1000); + chart.setDevice(dev); + JDialog dlg = SwingUtils.showDialog(dataTableDialog, cameraName + " " + id, null, chart); + //TODO: + //PlotBase plot = chart.getPlot(); + //if (plot!=null){ + // plot.setPlotBackgroundColor(Color.BLACK); + //} + } + } + } + } + } catch (Exception ex) { + showException(ex); + } + } + }); + SwingUtils.centerComponent(getTopLevel(), dataTableDialog); + updateStreamData(); + } + } + + volatile boolean updatingStreamData = false; + + void updateStreamData() { + if ((dataTableDialog == null) || !dataTableDialog.isShowing() || updatingStreamData) { + return; + } + updatingStreamData = true; + SwingUtilities.invokeLater(() -> { + updatingStreamData = false; + if ((dataTableModel != null) && (server != null)) { + StreamValue value = server.getValue(); + Frame frame = getCurrentFrame(); + int[] sel_rows = (dataTable == null) ? null : dataTable.getSelectedRows(); + int[] sel_cols = (dataTable == null) ? null : dataTable.getSelectedColumns(); + List ids = (value == null) ? new ArrayList<>() : new ArrayList(value.getIdentifiers()); + if (ids.size() + 4 != dataTableModel.getRowCount()) { + dataTableModel.setNumRows(0); + try { + dataTableModel.addRow(new Object[]{"Locator", server.getUrl() + "/" + ((value == null) ? instanceName : server.getCurrentInstance())}); + } catch (Exception ex) { + dataTableModel.addRow(new Object[]{"Locator", ex.getMessage()}); + } + try { + dataTableModel.addRow(new Object[]{"Stream", server.getStreamAddress()}); + } catch (Exception ex) { + dataTableModel.addRow(new Object[]{"Stream", ex.getMessage()}); + } + dataTableModel.addRow(new Object[]{"PID", ""}); + dataTableModel.addRow(new Object[]{"Timestamp", ""}); + Collections.sort(ids); + for (String id : ids) { + dataTableModel.addRow(new Object[]{id, ""}); + } + } + + if ((frame != null) && (frame.cache != null)) { + dataTableModel.setValueAt(frame.cache.getPulseId(), 2, 1); //PID + dataTableModel.setValueAt(frame.cache.getTimestamp(), 3, 1); //Timestamp + for (int i = 4; i < dataTableModel.getRowCount(); i++) { + String id = String.valueOf(dataTableModel.getValueAt(i, 0)); + //Object obj = server.getValue(id); + Object obj = frame.cache.getValue(id); + if (obj != null) { + if (obj.getClass().isArray()) { + obj = obj.getClass().getComponentType().getSimpleName() + "[" + Array.getLength(obj) + "]"; + } else if (obj instanceof Double) { + obj = Convert.roundDouble((Double) obj, 1); + } else if (obj instanceof Float) { + obj = Convert.roundDouble((Float) obj, 1); + } + } + dataTableModel.setValueAt(String.valueOf(obj), i, 1); + } + } + if ((sel_rows != null) && (sel_rows.length > 0)) { + //dataTable.setRowSelectionInterval((Integer)Arr.getMin(sel_rows), (Integer)Arr.getMax(sel_rows)); + dataTable.setRowSelectionInterval(sel_rows[0], sel_rows[sel_rows.length - 1]); + } + if ((sel_cols != null) && (sel_cols.length > 0)) { + //dataTable.setColumnSelectionInterval((Integer)Arr.getMin(sel_cols), (Integer)Arr.getMax(sel_cols)); + dataTable.setColumnSelectionInterval(sel_cols[0], sel_cols[sel_cols.length - 1]); + } + } + }); + } + + ImageIcon getIcon(String name) { + ImageIcon ret = null; + try { + //Path path = Paths.get(getClass().getProtectionDomain().getCodeSource().getLocation().getPath(),"resources", name + ".png"); + String dir = getClass().getProtectionDomain().getCodeSource().getLocation().getPath() + "resources/"; + if (new File(dir + name + ".png").exists()) { + ret = new javax.swing.ImageIcon(dir + name + ".png"); + } else { + ret = new ImageIcon(ch.psi.pshell.ui.App.class.getResource("/ch/psi/pshell/ui/" + name + ".png")); + if (MainFrame.isDark()) { + try { + ret = new ImageIcon(ch.psi.pshell.ui.App.class.getResource("/ch/psi/pshell/ui/dark/" + name + ".png")); + } catch (Exception e) { + } + } + } + } catch (Exception ex) { + ex.printStackTrace(); + } + return ret; + } + + String getIconName(JButton button) { + String ret = button.getIcon().toString(); + if (ret.indexOf(".") > 0) { + ret = ret.substring(0, ret.indexOf(".")); + } + return ret; + } + + void setPaused(boolean paused){ + removePauseOverlay(); + if (camera != null) { + synchronized (imageBuffer) { + if (paused) { + renderer.pause(); + panelCameraSelection.setVisible(false); + pauseSelection.setVisible(true); + if (imageBuffer.size() > 0) { + pauseSelection.setEnabled(true); + pauseSelection.setMaxValue(imageBuffer.size()); + pauseSelection.setValue(imageBuffer.size()); + updatePause(); + } else { + pauseSelection.setEnabled(false); + pauseSelection.setMaxValue(1); + pauseSelection.setValue(1); + } + } else { + imageBuffer.clear(); + renderer.resume(); + //renderer.clear(); + pauseSelection.setVisible(false); + panelCameraSelection.setVisible(true); + } + } + updateStreamData(); + } + } + + boolean isPaused(){ + return renderer.isPaused(); + } + + //////// + @SuppressWarnings("unchecked") + // //GEN-BEGIN:initComponents + private void initComponents() { + + buttonGroup1 = new javax.swing.ButtonGroup(); + buttonGroup2 = new javax.swing.ButtonGroup(); + buttonGroup3 = new javax.swing.ButtonGroup(); + buttonGroup4 = new javax.swing.ButtonGroup(); + jProgressBar1 = new javax.swing.JProgressBar(); + sidePanel = new javax.swing.JPanel(); + jPanel3 = new javax.swing.JPanel(); + buttonZoomFit = new javax.swing.JRadioButton(); + buttonZoomStretch = new javax.swing.JRadioButton(); + buttonZoomNormal = new javax.swing.JRadioButton(); + buttonZoom025 = new javax.swing.JRadioButton(); + buttonZoom05 = new javax.swing.JRadioButton(); + buttonZoom2 = new javax.swing.JRadioButton(); + jPanel2 = new javax.swing.JPanel(); + checkHistogram = new javax.swing.JCheckBox(); + comboColormap = new javax.swing.JComboBox(); + jLabel3 = new javax.swing.JLabel(); + jLabel4 = new javax.swing.JLabel(); + buttonFullRange = new javax.swing.JRadioButton(); + buttonManual = new javax.swing.JRadioButton(); + buttonAutomatic = new javax.swing.JRadioButton(); + labelMin = new javax.swing.JLabel(); + spinnerMin = new javax.swing.JSpinner(); + spinnerMax = new javax.swing.JSpinner(); + labelMax = new javax.swing.JLabel(); + btFixColormapRange = new javax.swing.JButton(); + jPanel5 = new javax.swing.JPanel(); + buttonServer = new javax.swing.JRadioButton(); + buttonDirect = new javax.swing.JRadioButton(); + textState = new javax.swing.JTextField(); + filler1 = new javax.swing.Box.Filler(new java.awt.Dimension(0, 0), new java.awt.Dimension(0, 0), new java.awt.Dimension(0, 32767)); + panelScreen = new javax.swing.JPanel(); + valueScreen = new ch.psi.pshell.swing.DeviceValuePanel(); + comboScreen = new javax.swing.JComboBox(); + panelFilter = new javax.swing.JPanel(); + valueFilter = new ch.psi.pshell.swing.DeviceValuePanel(); + comboFilter = new javax.swing.JComboBox(); + panelScreen2 = new javax.swing.JPanel(); + checkThreshold = new javax.swing.JCheckBox(); + spinnerThreshold = new javax.swing.JSpinner(); + checkBackground = new javax.swing.JCheckBox(); + checkGoodRegion = new javax.swing.JCheckBox(); + spinnerGrScale = new javax.swing.JSpinner(); + spinnerGrThreshold = new javax.swing.JSpinner(); + labelGrThreshold = new javax.swing.JLabel(); + labelGrScale = new javax.swing.JLabel(); + panelSlicing = new javax.swing.JPanel(); + checkSlicing = new javax.swing.JCheckBox(); + labelSlScale = new javax.swing.JLabel(); + spinnerSlScale = new javax.swing.JSpinner(); + labelSlNumber = new javax.swing.JLabel(); + spinnerSlNumber = new javax.swing.JSpinner(); + labelSlOrientation = new javax.swing.JLabel(); + spinnerSlOrientation = new javax.swing.JSpinner(); + topPanel = new javax.swing.JPanel(); + toolBar = new javax.swing.JToolBar(); + buttonSidePanel = new javax.swing.JToggleButton(); + buttonStreamData = new javax.swing.JButton(); + buttonSave = new javax.swing.JToggleButton(); + buttonGrabBackground = new javax.swing.JButton(); + buttonPause = new javax.swing.JToggleButton(); + jSeparator6 = new javax.swing.JToolBar.Separator(); + buttonMarker = new javax.swing.JToggleButton(); + buttonProfile = new javax.swing.JToggleButton(); + buttonFit = new javax.swing.JToggleButton(); + buttonReticle = new javax.swing.JToggleButton(); + buttonScale = new javax.swing.JToggleButton(); + buttonTitle = new javax.swing.JToggleButton(); + pauseSelection = new ch.psi.pshell.swing.ValueSelection(); + panelCameraSelection = new javax.swing.JPanel(); + jLabel1 = new javax.swing.JLabel(); + comboCameras = new javax.swing.JComboBox(); + jLabel5 = new javax.swing.JLabel(); + comboType = new javax.swing.JComboBox(); + renderer = new ch.psi.pshell.imaging.Renderer(); + + setPreferredSize(new java.awt.Dimension(873, 600)); + + jPanel3.setBorder(javax.swing.BorderFactory.createTitledBorder("Zoom")); + + buttonGroup1.add(buttonZoomFit); + buttonZoomFit.setText("Fit"); + buttonZoomFit.addActionListener(new java.awt.event.ActionListener() { + public void actionPerformed(java.awt.event.ActionEvent evt) { + buttonZoomFitActionPerformed(evt); + } + }); + + buttonGroup1.add(buttonZoomStretch); + buttonZoomStretch.setText("Stretch"); + buttonZoomStretch.addActionListener(new java.awt.event.ActionListener() { + public void actionPerformed(java.awt.event.ActionEvent evt) { + buttonZoomStretchActionPerformed(evt); + } + }); + + buttonGroup1.add(buttonZoomNormal); + buttonZoomNormal.setText("Normal"); + buttonZoomNormal.addActionListener(new java.awt.event.ActionListener() { + public void actionPerformed(java.awt.event.ActionEvent evt) { + buttonZoomNormalActionPerformed(evt); + } + }); + + buttonGroup1.add(buttonZoom025); + buttonZoom025.setText("1/4"); + buttonZoom025.addActionListener(new java.awt.event.ActionListener() { + public void actionPerformed(java.awt.event.ActionEvent evt) { + buttonZoom025ActionPerformed(evt); + } + }); + + buttonGroup1.add(buttonZoom05); + buttonZoom05.setText("1/2"); + buttonZoom05.addActionListener(new java.awt.event.ActionListener() { + public void actionPerformed(java.awt.event.ActionEvent evt) { + buttonZoom05ActionPerformed(evt); + } + }); + + buttonGroup1.add(buttonZoom2); + buttonZoom2.setText("2"); + buttonZoom2.addActionListener(new java.awt.event.ActionListener() { + public void actionPerformed(java.awt.event.ActionEvent evt) { + buttonZoom2ActionPerformed(evt); + } + }); + + javax.swing.GroupLayout jPanel3Layout = new javax.swing.GroupLayout(jPanel3); + jPanel3.setLayout(jPanel3Layout); + jPanel3Layout.setHorizontalGroup( + jPanel3Layout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING) + .addGroup(jPanel3Layout.createSequentialGroup() + .addContainerGap() + .addGroup(jPanel3Layout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING) + .addComponent(buttonZoomFit) + .addComponent(buttonZoomNormal) + .addComponent(buttonZoomStretch)) + .addPreferredGap(javax.swing.LayoutStyle.ComponentPlacement.RELATED, javax.swing.GroupLayout.DEFAULT_SIZE, Short.MAX_VALUE) + .addGroup(jPanel3Layout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING) + .addComponent(buttonZoom025) + .addComponent(buttonZoom05) + .addComponent(buttonZoom2)) + .addContainerGap(javax.swing.GroupLayout.DEFAULT_SIZE, Short.MAX_VALUE)) + ); + jPanel3Layout.setVerticalGroup( + jPanel3Layout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING) + .addGroup(jPanel3Layout.createSequentialGroup() + .addGap(4, 4, 4) + .addGroup(jPanel3Layout.createParallelGroup(javax.swing.GroupLayout.Alignment.CENTER) + .addComponent(buttonZoomNormal) + .addComponent(buttonZoom025)) + .addGap(0, 0, 0) + .addGroup(jPanel3Layout.createParallelGroup(javax.swing.GroupLayout.Alignment.CENTER) + .addComponent(buttonZoomFit) + .addComponent(buttonZoom05)) + .addGap(0, 0, 0) + .addGroup(jPanel3Layout.createParallelGroup(javax.swing.GroupLayout.Alignment.CENTER) + .addComponent(buttonZoomStretch) + .addComponent(buttonZoom2)) + .addContainerGap()) + ); + + jPanel2.setBorder(javax.swing.BorderFactory.createTitledBorder("Colormap")); + + checkHistogram.setText("Histogram"); + checkHistogram.addActionListener(new java.awt.event.ActionListener() { + public void actionPerformed(java.awt.event.ActionEvent evt) { + checkHistogramActionPerformed(evt); + } + }); + + comboColormap.addActionListener(new java.awt.event.ActionListener() { + public void actionPerformed(java.awt.event.ActionEvent evt) { + onChangeColormap(evt); + } + }); + + jLabel3.setHorizontalAlignment(javax.swing.SwingConstants.TRAILING); + jLabel3.setText("Type:"); + + jLabel4.setHorizontalAlignment(javax.swing.SwingConstants.TRAILING); + jLabel4.setText("Range:"); + + buttonGroup3.add(buttonFullRange); + buttonFullRange.setText("Full"); + buttonFullRange.addActionListener(new java.awt.event.ActionListener() { + public void actionPerformed(java.awt.event.ActionEvent evt) { + onChangeColormap(evt); + } + }); + + buttonGroup3.add(buttonManual); + buttonManual.setText("Manual"); + buttonManual.addActionListener(new java.awt.event.ActionListener() { + public void actionPerformed(java.awt.event.ActionEvent evt) { + onChangeColormap(evt); + } + }); + + buttonGroup3.add(buttonAutomatic); + buttonAutomatic.setText("Automatic"); + buttonAutomatic.addActionListener(new java.awt.event.ActionListener() { + public void actionPerformed(java.awt.event.ActionEvent evt) { + onChangeColormap(evt); + } + }); + + labelMin.setText("Min:"); + + spinnerMin.setModel(new javax.swing.SpinnerNumberModel(0, 0, 65535, 1)); + spinnerMin.setEnabled(false); + spinnerMin.setPreferredSize(new java.awt.Dimension(77, 20)); + spinnerMin.addChangeListener(new javax.swing.event.ChangeListener() { + public void stateChanged(javax.swing.event.ChangeEvent evt) { + onChangeColormapRange(evt); + } + }); + + spinnerMax.setModel(new javax.swing.SpinnerNumberModel(255, 0, 65535, 1)); + spinnerMax.setEnabled(false); + spinnerMax.setPreferredSize(new java.awt.Dimension(77, 20)); + spinnerMax.addChangeListener(new javax.swing.event.ChangeListener() { + public void stateChanged(javax.swing.event.ChangeEvent evt) { + onChangeColormapRange(evt); + } + }); + + labelMax.setText("Max:"); + + btFixColormapRange.setText("Fix"); + btFixColormapRange.addActionListener(new java.awt.event.ActionListener() { + public void actionPerformed(java.awt.event.ActionEvent evt) { + btFixColormapRangeActionPerformed(evt); + } + }); + + javax.swing.GroupLayout jPanel2Layout = new javax.swing.GroupLayout(jPanel2); + jPanel2.setLayout(jPanel2Layout); + jPanel2Layout.setHorizontalGroup( + jPanel2Layout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING) + .addGroup(jPanel2Layout.createSequentialGroup() + .addGap(4, 4, 4) + .addGroup(jPanel2Layout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING) + .addComponent(jLabel3) + .addComponent(jLabel4)) + .addGap(4, 4, 4) + .addGroup(jPanel2Layout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING) + .addComponent(buttonAutomatic) + .addComponent(buttonFullRange) + .addComponent(buttonManual) + .addComponent(comboColormap, javax.swing.GroupLayout.PREFERRED_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.PREFERRED_SIZE)) + .addPreferredGap(javax.swing.LayoutStyle.ComponentPlacement.RELATED, javax.swing.GroupLayout.DEFAULT_SIZE, Short.MAX_VALUE) + .addGroup(jPanel2Layout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING) + .addGroup(javax.swing.GroupLayout.Alignment.TRAILING, jPanel2Layout.createSequentialGroup() + .addComponent(labelMax) + .addGap(2, 2, 2) + .addComponent(spinnerMax, javax.swing.GroupLayout.PREFERRED_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.PREFERRED_SIZE)) + .addComponent(checkHistogram, javax.swing.GroupLayout.Alignment.TRAILING) + .addGroup(javax.swing.GroupLayout.Alignment.TRAILING, jPanel2Layout.createSequentialGroup() + .addComponent(labelMin) + .addGap(2, 2, 2) + .addGroup(jPanel2Layout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING, false) + .addComponent(btFixColormapRange, javax.swing.GroupLayout.Alignment.TRAILING) + .addComponent(spinnerMin, javax.swing.GroupLayout.Alignment.TRAILING, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, Short.MAX_VALUE)))) + .addContainerGap()) + ); + + jPanel2Layout.linkSize(javax.swing.SwingConstants.HORIZONTAL, new java.awt.Component[] {btFixColormapRange, spinnerMax, spinnerMin}); + + jPanel2Layout.linkSize(javax.swing.SwingConstants.HORIZONTAL, new java.awt.Component[] {jLabel3, jLabel4}); + + jPanel2Layout.setVerticalGroup( + jPanel2Layout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING) + .addGroup(javax.swing.GroupLayout.Alignment.TRAILING, jPanel2Layout.createSequentialGroup() + .addGap(4, 4, 4) + .addGroup(jPanel2Layout.createParallelGroup(javax.swing.GroupLayout.Alignment.BASELINE) + .addComponent(comboColormap, javax.swing.GroupLayout.PREFERRED_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.PREFERRED_SIZE) + .addComponent(jLabel3) + .addComponent(checkHistogram)) + .addPreferredGap(javax.swing.LayoutStyle.ComponentPlacement.RELATED) + .addGroup(jPanel2Layout.createParallelGroup(javax.swing.GroupLayout.Alignment.BASELINE) + .addComponent(buttonAutomatic) + .addComponent(jLabel4) + .addComponent(btFixColormapRange, javax.swing.GroupLayout.PREFERRED_SIZE, 26, javax.swing.GroupLayout.PREFERRED_SIZE)) + .addGap(0, 0, 0) + .addGroup(jPanel2Layout.createParallelGroup(javax.swing.GroupLayout.Alignment.CENTER) + .addComponent(labelMin) + .addComponent(spinnerMin, javax.swing.GroupLayout.PREFERRED_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.PREFERRED_SIZE) + .addComponent(buttonFullRange)) + .addGroup(jPanel2Layout.createParallelGroup(javax.swing.GroupLayout.Alignment.CENTER) + .addComponent(buttonManual) + .addComponent(labelMax) + .addComponent(spinnerMax, javax.swing.GroupLayout.PREFERRED_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.PREFERRED_SIZE)) + .addContainerGap()) + ); + + jPanel5.setBorder(javax.swing.BorderFactory.createTitledBorder("Source")); + + buttonGroup4.add(buttonServer); + buttonServer.setSelected(true); + buttonServer.setText("Server"); + buttonServer.addActionListener(new java.awt.event.ActionListener() { + public void actionPerformed(java.awt.event.ActionEvent evt) { + buttonServerActionPerformed(evt); + } + }); + + buttonGroup4.add(buttonDirect); + buttonDirect.setText("Direct"); + buttonDirect.addActionListener(new java.awt.event.ActionListener() { + public void actionPerformed(java.awt.event.ActionEvent evt) { + buttonDirectActionPerformed(evt); + } + }); + + textState.setEditable(false); + textState.setHorizontalAlignment(javax.swing.JTextField.CENTER); + textState.setDisabledTextColor(new java.awt.Color(0, 0, 0)); + textState.setEnabled(false); + + javax.swing.GroupLayout jPanel5Layout = new javax.swing.GroupLayout(jPanel5); + jPanel5.setLayout(jPanel5Layout); + jPanel5Layout.setHorizontalGroup( + jPanel5Layout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING) + .addGroup(jPanel5Layout.createSequentialGroup() + .addContainerGap() + .addComponent(buttonServer) + .addPreferredGap(javax.swing.LayoutStyle.ComponentPlacement.RELATED) + .addComponent(buttonDirect) + .addPreferredGap(javax.swing.LayoutStyle.ComponentPlacement.RELATED, javax.swing.GroupLayout.DEFAULT_SIZE, Short.MAX_VALUE) + .addComponent(textState, javax.swing.GroupLayout.PREFERRED_SIZE, 80, javax.swing.GroupLayout.PREFERRED_SIZE) + .addContainerGap()) + .addGroup(javax.swing.GroupLayout.Alignment.TRAILING, jPanel5Layout.createSequentialGroup() + .addContainerGap(javax.swing.GroupLayout.DEFAULT_SIZE, Short.MAX_VALUE) + .addComponent(filler1, javax.swing.GroupLayout.PREFERRED_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.PREFERRED_SIZE) + .addGap(56, 56, 56)) + ); + jPanel5Layout.setVerticalGroup( + jPanel5Layout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING) + .addGroup(jPanel5Layout.createSequentialGroup() + .addGap(4, 4, 4) + .addGroup(jPanel5Layout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING) + .addGroup(jPanel5Layout.createSequentialGroup() + .addComponent(textState, javax.swing.GroupLayout.PREFERRED_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.PREFERRED_SIZE) + .addPreferredGap(javax.swing.LayoutStyle.ComponentPlacement.RELATED, javax.swing.GroupLayout.DEFAULT_SIZE, Short.MAX_VALUE) + .addComponent(filler1, javax.swing.GroupLayout.PREFERRED_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.PREFERRED_SIZE)) + .addGroup(jPanel5Layout.createParallelGroup(javax.swing.GroupLayout.Alignment.BASELINE) + .addComponent(buttonServer) + .addComponent(buttonDirect))) + .addContainerGap()) + ); + + panelScreen.setBorder(javax.swing.BorderFactory.createTitledBorder("Screen")); + + comboScreen.setEnabled(false); + comboScreen.addActionListener(new java.awt.event.ActionListener() { + public void actionPerformed(java.awt.event.ActionEvent evt) { + comboScreenActionPerformed(evt); + } + }); + + javax.swing.GroupLayout panelScreenLayout = new javax.swing.GroupLayout(panelScreen); + panelScreen.setLayout(panelScreenLayout); + panelScreenLayout.setHorizontalGroup( + panelScreenLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING) + .addGroup(panelScreenLayout.createSequentialGroup() + .addContainerGap() + .addGroup(panelScreenLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING) + .addComponent(valueScreen, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, Short.MAX_VALUE) + .addComponent(comboScreen, 0, javax.swing.GroupLayout.DEFAULT_SIZE, Short.MAX_VALUE)) + .addContainerGap()) + ); + panelScreenLayout.setVerticalGroup( + panelScreenLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING) + .addGroup(javax.swing.GroupLayout.Alignment.TRAILING, panelScreenLayout.createSequentialGroup() + .addGap(4, 4, 4) + .addComponent(comboScreen, javax.swing.GroupLayout.PREFERRED_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.PREFERRED_SIZE) + .addPreferredGap(javax.swing.LayoutStyle.ComponentPlacement.RELATED) + .addComponent(valueScreen, javax.swing.GroupLayout.PREFERRED_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.PREFERRED_SIZE) + .addContainerGap()) + ); + + panelFilter.setBorder(javax.swing.BorderFactory.createTitledBorder("Filter")); + + comboFilter.setEnabled(false); + comboFilter.addActionListener(new java.awt.event.ActionListener() { + public void actionPerformed(java.awt.event.ActionEvent evt) { + comboFilterActionPerformed(evt); + } + }); + + javax.swing.GroupLayout panelFilterLayout = new javax.swing.GroupLayout(panelFilter); + panelFilter.setLayout(panelFilterLayout); + panelFilterLayout.setHorizontalGroup( + panelFilterLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING) + .addGroup(panelFilterLayout.createSequentialGroup() + .addContainerGap() + .addGroup(panelFilterLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING) + .addComponent(valueFilter, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, Short.MAX_VALUE) + .addComponent(comboFilter, 0, javax.swing.GroupLayout.DEFAULT_SIZE, Short.MAX_VALUE)) + .addContainerGap()) + ); + panelFilterLayout.setVerticalGroup( + panelFilterLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING) + .addGroup(javax.swing.GroupLayout.Alignment.TRAILING, panelFilterLayout.createSequentialGroup() + .addGap(4, 4, 4) + .addComponent(comboFilter, javax.swing.GroupLayout.PREFERRED_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.PREFERRED_SIZE) + .addPreferredGap(javax.swing.LayoutStyle.ComponentPlacement.RELATED) + .addComponent(valueFilter, javax.swing.GroupLayout.PREFERRED_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.PREFERRED_SIZE) + .addContainerGap(javax.swing.GroupLayout.DEFAULT_SIZE, Short.MAX_VALUE)) + ); + + panelScreen2.setBorder(javax.swing.BorderFactory.createTitledBorder("Pipeline")); + + checkThreshold.setText("Threshold"); + checkThreshold.addActionListener(new java.awt.event.ActionListener() { + public void actionPerformed(java.awt.event.ActionEvent evt) { + checkThresholdActionPerformed(evt); + } + }); + + spinnerThreshold.setModel(new javax.swing.SpinnerNumberModel(0.0d, 0.0d, 99999.0d, 1.0d)); + spinnerThreshold.addChangeListener(new javax.swing.event.ChangeListener() { + public void stateChanged(javax.swing.event.ChangeEvent evt) { + spinnerThresholdonChange(evt); + } + }); + + checkBackground.setText("Subtract Background"); + checkBackground.addActionListener(new java.awt.event.ActionListener() { + public void actionPerformed(java.awt.event.ActionEvent evt) { + checkBackgroundActionPerformed(evt); + } + }); + + checkGoodRegion.setText("Good Region"); + checkGoodRegion.addActionListener(new java.awt.event.ActionListener() { + public void actionPerformed(java.awt.event.ActionEvent evt) { + checkGoodRegionActionPerformed(evt); + } + }); + + spinnerGrScale.setModel(new javax.swing.SpinnerNumberModel(3.0d, 0.01d, 99999.0d, 1.0d)); + spinnerGrScale.addChangeListener(new javax.swing.event.ChangeListener() { + public void stateChanged(javax.swing.event.ChangeEvent evt) { + spinnerGrThresholdonChange(evt); + } + }); + + spinnerGrThreshold.setModel(new javax.swing.SpinnerNumberModel(0.5d, 0.04d, 1.0d, 0.1d)); + spinnerGrThreshold.setPreferredSize(new java.awt.Dimension(92, 20)); + spinnerGrThreshold.addChangeListener(new javax.swing.event.ChangeListener() { + public void stateChanged(javax.swing.event.ChangeEvent evt) { + spinnerGrThresholdonChange(evt); + } + }); + + labelGrThreshold.setText("Threshold:"); + + labelGrScale.setText("Scale:"); + + checkSlicing.setText("Slicing"); + checkSlicing.addActionListener(new java.awt.event.ActionListener() { + public void actionPerformed(java.awt.event.ActionEvent evt) { + checkSlicingActionPerformed(evt); + } + }); + + labelSlScale.setText("Scale:"); + + spinnerSlScale.setModel(new javax.swing.SpinnerNumberModel(3.0d, 0.01d, 99999.0d, 1.0d)); + spinnerSlScale.addChangeListener(new javax.swing.event.ChangeListener() { + public void stateChanged(javax.swing.event.ChangeEvent evt) { + spinnerSlicingChange(evt); + } + }); + + labelSlNumber.setText("Slices:"); + + spinnerSlNumber.setModel(new javax.swing.SpinnerNumberModel(2, 0, 1000, 1)); + spinnerSlNumber.setPreferredSize(new java.awt.Dimension(92, 20)); + spinnerSlNumber.addChangeListener(new javax.swing.event.ChangeListener() { + public void stateChanged(javax.swing.event.ChangeEvent evt) { + spinnerSlicingChange(evt); + } + }); + + labelSlOrientation.setText("Orientation:"); + + spinnerSlOrientation.setModel(new javax.swing.SpinnerListModel(new String[] {"vertical", "horizontal"})); + spinnerSlOrientation.setPreferredSize(new java.awt.Dimension(92, 20)); + spinnerSlOrientation.addChangeListener(new javax.swing.event.ChangeListener() { + public void stateChanged(javax.swing.event.ChangeEvent evt) { + spinnerSlicingChange(evt); + } + }); + + javax.swing.GroupLayout panelSlicingLayout = new javax.swing.GroupLayout(panelSlicing); + panelSlicing.setLayout(panelSlicingLayout); + panelSlicingLayout.setHorizontalGroup( + panelSlicingLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING) + .addGroup(panelSlicingLayout.createSequentialGroup() + .addContainerGap() + .addGroup(panelSlicingLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING) + .addGroup(panelSlicingLayout.createSequentialGroup() + .addComponent(checkSlicing) + .addPreferredGap(javax.swing.LayoutStyle.ComponentPlacement.RELATED, javax.swing.GroupLayout.DEFAULT_SIZE, Short.MAX_VALUE) + .addGroup(panelSlicingLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING) + .addGroup(javax.swing.GroupLayout.Alignment.TRAILING, panelSlicingLayout.createSequentialGroup() + .addComponent(labelSlNumber) + .addGap(2, 2, 2) + .addComponent(spinnerSlNumber, javax.swing.GroupLayout.PREFERRED_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.PREFERRED_SIZE)) + .addGroup(javax.swing.GroupLayout.Alignment.TRAILING, panelSlicingLayout.createSequentialGroup() + .addComponent(labelSlScale) + .addGap(2, 2, 2) + .addComponent(spinnerSlScale, javax.swing.GroupLayout.PREFERRED_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.PREFERRED_SIZE)))) + .addGroup(javax.swing.GroupLayout.Alignment.TRAILING, panelSlicingLayout.createSequentialGroup() + .addGap(0, 0, Short.MAX_VALUE) + .addComponent(labelSlOrientation) + .addGap(2, 2, 2) + .addComponent(spinnerSlOrientation, javax.swing.GroupLayout.PREFERRED_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.PREFERRED_SIZE))) + .addContainerGap()) + ); + + panelSlicingLayout.linkSize(javax.swing.SwingConstants.HORIZONTAL, new java.awt.Component[] {spinnerSlNumber, spinnerSlOrientation, spinnerSlScale}); + + panelSlicingLayout.setVerticalGroup( + panelSlicingLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING) + .addGroup(panelSlicingLayout.createSequentialGroup() + .addGroup(panelSlicingLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING) + .addComponent(checkSlicing) + .addGroup(panelSlicingLayout.createSequentialGroup() + .addGroup(panelSlicingLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.BASELINE) + .addComponent(spinnerSlNumber, javax.swing.GroupLayout.PREFERRED_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.PREFERRED_SIZE) + .addComponent(labelSlNumber)) + .addPreferredGap(javax.swing.LayoutStyle.ComponentPlacement.RELATED) + .addGroup(panelSlicingLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.BASELINE) + .addComponent(spinnerSlScale, javax.swing.GroupLayout.PREFERRED_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.PREFERRED_SIZE) + .addComponent(labelSlScale)))) + .addPreferredGap(javax.swing.LayoutStyle.ComponentPlacement.RELATED) + .addGroup(panelSlicingLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.BASELINE) + .addComponent(spinnerSlOrientation, javax.swing.GroupLayout.PREFERRED_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.PREFERRED_SIZE) + .addComponent(labelSlOrientation))) + ); + + javax.swing.GroupLayout panelScreen2Layout = new javax.swing.GroupLayout(panelScreen2); + panelScreen2.setLayout(panelScreen2Layout); + panelScreen2Layout.setHorizontalGroup( + panelScreen2Layout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING) + .addGroup(panelScreen2Layout.createSequentialGroup() + .addContainerGap() + .addGroup(panelScreen2Layout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING) + .addGroup(panelScreen2Layout.createSequentialGroup() + .addComponent(checkThreshold) + .addPreferredGap(javax.swing.LayoutStyle.ComponentPlacement.RELATED, javax.swing.GroupLayout.DEFAULT_SIZE, Short.MAX_VALUE)) + .addGroup(javax.swing.GroupLayout.Alignment.TRAILING, panelScreen2Layout.createSequentialGroup() + .addGroup(panelScreen2Layout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING) + .addGroup(javax.swing.GroupLayout.Alignment.TRAILING, panelScreen2Layout.createSequentialGroup() + .addComponent(checkGoodRegion) + .addPreferredGap(javax.swing.LayoutStyle.ComponentPlacement.RELATED, javax.swing.GroupLayout.DEFAULT_SIZE, Short.MAX_VALUE) + .addComponent(labelGrScale)) + .addGroup(javax.swing.GroupLayout.Alignment.TRAILING, panelScreen2Layout.createSequentialGroup() + .addGap(0, 0, Short.MAX_VALUE) + .addComponent(labelGrThreshold))) + .addGap(2, 2, 2))) + .addGroup(panelScreen2Layout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING) + .addComponent(spinnerGrThreshold, javax.swing.GroupLayout.PREFERRED_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.PREFERRED_SIZE) + .addComponent(spinnerGrScale, javax.swing.GroupLayout.PREFERRED_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.PREFERRED_SIZE) + .addComponent(spinnerThreshold, javax.swing.GroupLayout.PREFERRED_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.PREFERRED_SIZE)) + .addContainerGap()) + .addComponent(panelSlicing, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, Short.MAX_VALUE) + .addGroup(panelScreen2Layout.createSequentialGroup() + .addGap(6, 6, 6) + .addComponent(checkBackground) + .addGap(106, 106, 106)) + ); + + panelScreen2Layout.linkSize(javax.swing.SwingConstants.HORIZONTAL, new java.awt.Component[] {spinnerGrScale, spinnerGrThreshold, spinnerThreshold}); + + panelScreen2Layout.setVerticalGroup( + panelScreen2Layout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING) + .addGroup(panelScreen2Layout.createSequentialGroup() + .addContainerGap() + .addComponent(checkBackground) + .addGap(2, 2, 2) + .addGroup(panelScreen2Layout.createParallelGroup(javax.swing.GroupLayout.Alignment.BASELINE) + .addComponent(checkThreshold) + .addComponent(spinnerThreshold, javax.swing.GroupLayout.PREFERRED_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.PREFERRED_SIZE)) + .addGap(2, 2, 2) + .addGroup(panelScreen2Layout.createParallelGroup(javax.swing.GroupLayout.Alignment.BASELINE) + .addComponent(checkGoodRegion) + .addComponent(spinnerGrScale, javax.swing.GroupLayout.PREFERRED_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.PREFERRED_SIZE) + .addComponent(labelGrScale)) + .addGap(2, 2, 2) + .addGroup(panelScreen2Layout.createParallelGroup(javax.swing.GroupLayout.Alignment.BASELINE) + .addComponent(spinnerGrThreshold, javax.swing.GroupLayout.PREFERRED_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.PREFERRED_SIZE) + .addComponent(labelGrThreshold)) + .addPreferredGap(javax.swing.LayoutStyle.ComponentPlacement.RELATED) + .addComponent(panelSlicing, javax.swing.GroupLayout.PREFERRED_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.PREFERRED_SIZE) + .addContainerGap()) + ); + + javax.swing.GroupLayout sidePanelLayout = new javax.swing.GroupLayout(sidePanel); + sidePanel.setLayout(sidePanelLayout); + sidePanelLayout.setHorizontalGroup( + sidePanelLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING) + .addGroup(sidePanelLayout.createSequentialGroup() + .addContainerGap() + .addGroup(sidePanelLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.TRAILING, false) + .addComponent(jPanel5, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, Short.MAX_VALUE) + .addComponent(jPanel3, javax.swing.GroupLayout.Alignment.LEADING, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, Short.MAX_VALUE) + .addComponent(jPanel2, javax.swing.GroupLayout.Alignment.LEADING, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, Short.MAX_VALUE) + .addComponent(panelScreen2, javax.swing.GroupLayout.Alignment.LEADING, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, Short.MAX_VALUE) + .addComponent(panelScreen, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, Short.MAX_VALUE) + .addComponent(panelFilter, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, Short.MAX_VALUE)) + .addContainerGap(javax.swing.GroupLayout.DEFAULT_SIZE, Short.MAX_VALUE)) + ); + sidePanelLayout.setVerticalGroup( + sidePanelLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING) + .addGroup(sidePanelLayout.createSequentialGroup() + .addGap(0, 0, 0) + .addComponent(jPanel5, javax.swing.GroupLayout.PREFERRED_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.PREFERRED_SIZE) + .addPreferredGap(javax.swing.LayoutStyle.ComponentPlacement.RELATED) + .addComponent(panelScreen2, javax.swing.GroupLayout.PREFERRED_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.PREFERRED_SIZE) + .addPreferredGap(javax.swing.LayoutStyle.ComponentPlacement.RELATED) + .addComponent(jPanel3, javax.swing.GroupLayout.PREFERRED_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.PREFERRED_SIZE) + .addPreferredGap(javax.swing.LayoutStyle.ComponentPlacement.RELATED) + .addComponent(jPanel2, javax.swing.GroupLayout.PREFERRED_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.PREFERRED_SIZE) + .addPreferredGap(javax.swing.LayoutStyle.ComponentPlacement.RELATED) + .addComponent(panelScreen, javax.swing.GroupLayout.PREFERRED_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.PREFERRED_SIZE) + .addPreferredGap(javax.swing.LayoutStyle.ComponentPlacement.RELATED) + .addComponent(panelFilter, javax.swing.GroupLayout.PREFERRED_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.PREFERRED_SIZE) + .addContainerGap(javax.swing.GroupLayout.DEFAULT_SIZE, Short.MAX_VALUE)) + ); + + toolBar.setFloatable(false); + toolBar.setRollover(true); + + buttonSidePanel.setIcon(getIcon("List")); + buttonSidePanel.setSelected(true); + buttonSidePanel.setText(" "); + buttonSidePanel.setToolTipText("Show Side Panel"); + buttonSidePanel.setFocusable(false); + buttonSidePanel.setHorizontalTextPosition(javax.swing.SwingConstants.CENTER); + buttonSidePanel.addActionListener(new java.awt.event.ActionListener() { + public void actionPerformed(java.awt.event.ActionEvent evt) { + buttonSidePanelActionPerformed(evt); + } + }); + toolBar.add(buttonSidePanel); + + buttonStreamData.setIcon(getIcon("Details")); + buttonStreamData.setText(" "); + buttonStreamData.setToolTipText("Show Data Window"); + buttonStreamData.setFocusable(false); + buttonStreamData.setHorizontalTextPosition(javax.swing.SwingConstants.CENTER); + buttonStreamData.addActionListener(new java.awt.event.ActionListener() { + public void actionPerformed(java.awt.event.ActionEvent evt) { + buttonStreamDataActionPerformed(evt); + } + }); + toolBar.add(buttonStreamData); + + buttonSave.setIcon(getIcon("Save")); + buttonSave.setText(" "); + buttonSave.setToolTipText("Save Snapshot"); + buttonSave.setHorizontalTextPosition(javax.swing.SwingConstants.CENTER); + buttonSave.addActionListener(new java.awt.event.ActionListener() { + public void actionPerformed(java.awt.event.ActionEvent evt) { + buttonSaveActionPerformed(evt); + } + }); + toolBar.add(buttonSave); + + buttonGrabBackground.setIcon(getIcon("Background")); + buttonGrabBackground.setText(" "); + buttonGrabBackground.setToolTipText("Grab Background"); + buttonGrabBackground.setHorizontalTextPosition(javax.swing.SwingConstants.CENTER); + buttonGrabBackground.addActionListener(new java.awt.event.ActionListener() { + public void actionPerformed(java.awt.event.ActionEvent evt) { + buttonGrabBackgroundActionPerformed(evt); + } + }); + toolBar.add(buttonGrabBackground); + + buttonPause.setIcon(getIcon("Pause")); + buttonPause.setText(" "); + buttonPause.setToolTipText("Pause"); + buttonPause.setHorizontalTextPosition(javax.swing.SwingConstants.CENTER); + buttonPause.addActionListener(new java.awt.event.ActionListener() { + public void actionPerformed(java.awt.event.ActionEvent evt) { + buttonPauseActionPerformed(evt); + } + }); + toolBar.add(buttonPause); + + jSeparator6.setMaximumSize(new java.awt.Dimension(20, 32767)); + jSeparator6.setPreferredSize(new java.awt.Dimension(20, 0)); + jSeparator6.setRequestFocusEnabled(false); + toolBar.add(jSeparator6); + + buttonMarker.setIcon(getIcon("Marker")); + buttonMarker.setText(" "); + buttonMarker.setToolTipText("Show Marker"); + buttonMarker.setHorizontalTextPosition(javax.swing.SwingConstants.CENTER); + buttonMarker.addActionListener(new java.awt.event.ActionListener() { + public void actionPerformed(java.awt.event.ActionEvent evt) { + buttonMarkerActionPerformed(evt); + } + }); + toolBar.add(buttonMarker); + + buttonProfile.setIcon(getIcon("Profile" + + "")); + buttonProfile.setSelected(true); + buttonProfile.setText(" "); + buttonProfile.setToolTipText("Show Image Profile"); + buttonProfile.setHorizontalTextPosition(javax.swing.SwingConstants.CENTER); + buttonProfile.addActionListener(new java.awt.event.ActionListener() { + public void actionPerformed(java.awt.event.ActionEvent evt) { + buttonProfileActionPerformed(evt); + } + }); + toolBar.add(buttonProfile); + + buttonFit.setIcon(getIcon("Fit")); + buttonFit.setSelected(true); + buttonFit.setText(" "); + buttonFit.setToolTipText("Show Fit"); + buttonFit.setHorizontalTextPosition(javax.swing.SwingConstants.CENTER); + buttonFit.addActionListener(new java.awt.event.ActionListener() { + public void actionPerformed(java.awt.event.ActionEvent evt) { + buttonFitActionPerformed(evt); + } + }); + toolBar.add(buttonFit); + + buttonReticle.setIcon(getIcon("Reticule")); + buttonReticle.setSelected(true); + buttonReticle.setText(" "); + buttonReticle.setToolTipText("Show Reticle"); + buttonReticle.setHorizontalTextPosition(javax.swing.SwingConstants.CENTER); + buttonReticle.addActionListener(new java.awt.event.ActionListener() { + public void actionPerformed(java.awt.event.ActionEvent evt) { + buttonReticleActionPerformed(evt); + } + }); + toolBar.add(buttonReticle); + + buttonScale.setIcon(getIcon("Scale")); + buttonScale.setSelected(true); + buttonScale.setText(" "); + buttonScale.setToolTipText("Show Colormap Scale"); + buttonScale.setFocusable(false); + buttonScale.setHorizontalTextPosition(javax.swing.SwingConstants.CENTER); + buttonScale.addActionListener(new java.awt.event.ActionListener() { + public void actionPerformed(java.awt.event.ActionEvent evt) { + buttonScaleActionPerformed(evt); + } + }); + toolBar.add(buttonScale); + + buttonTitle.setIcon(getIcon("Title")); + buttonTitle.setSelected(true); + buttonTitle.setText(" "); + buttonTitle.setToolTipText("Show Camera Name"); + buttonTitle.setFocusable(false); + buttonTitle.setHorizontalTextPosition(javax.swing.SwingConstants.CENTER); + buttonTitle.addActionListener(new java.awt.event.ActionListener() { + public void actionPerformed(java.awt.event.ActionEvent evt) { + buttonTitleActionPerformed(evt); + } + }); + toolBar.add(buttonTitle); + + pauseSelection.setDecimals(0); + + jLabel1.setText("Camera:"); + + comboCameras.setFont(new java.awt.Font("Dialog", 1, 14)); // NOI18N + comboCameras.setMaximumRowCount(30); + comboCameras.setMinimumSize(new java.awt.Dimension(127, 27)); + comboCameras.addActionListener(new java.awt.event.ActionListener() { + public void actionPerformed(java.awt.event.ActionEvent evt) { + comboCamerasActionPerformed(evt); + } + }); + + jLabel5.setText("Type:"); + + comboType.setFont(new java.awt.Font("Dialog", 1, 14)); // NOI18N + comboType.setMaximumRowCount(30); + comboType.setModel(new javax.swing.DefaultComboBoxModel(new String[] { "All", "Laser", "Electrons", "Photonics" })); + comboType.addActionListener(new java.awt.event.ActionListener() { + public void actionPerformed(java.awt.event.ActionEvent evt) { + comboTypeActionPerformed(evt); + } + }); + + javax.swing.GroupLayout panelCameraSelectionLayout = new javax.swing.GroupLayout(panelCameraSelection); + panelCameraSelection.setLayout(panelCameraSelectionLayout); + panelCameraSelectionLayout.setHorizontalGroup( + panelCameraSelectionLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING) + .addGroup(panelCameraSelectionLayout.createSequentialGroup() + .addContainerGap() + .addComponent(jLabel1) + .addGap(0, 0, 0) + .addComponent(comboCameras, javax.swing.GroupLayout.PREFERRED_SIZE, 222, javax.swing.GroupLayout.PREFERRED_SIZE) + .addPreferredGap(javax.swing.LayoutStyle.ComponentPlacement.RELATED) + .addComponent(jLabel5) + .addPreferredGap(javax.swing.LayoutStyle.ComponentPlacement.RELATED) + .addComponent(comboType, javax.swing.GroupLayout.PREFERRED_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.PREFERRED_SIZE) + .addGap(0, 0, 0)) + ); + panelCameraSelectionLayout.setVerticalGroup( + panelCameraSelectionLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING) + .addGroup(panelCameraSelectionLayout.createSequentialGroup() + .addGap(0, 0, 0) + .addGroup(panelCameraSelectionLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.CENTER) + .addComponent(comboType, javax.swing.GroupLayout.PREFERRED_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.PREFERRED_SIZE) + .addComponent(jLabel5) + .addComponent(jLabel1) + .addComponent(comboCameras, javax.swing.GroupLayout.PREFERRED_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.PREFERRED_SIZE)) + .addGap(0, 0, 0)) + ); + + javax.swing.GroupLayout topPanelLayout = new javax.swing.GroupLayout(topPanel); + topPanel.setLayout(topPanelLayout); + topPanelLayout.setHorizontalGroup( + topPanelLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING) + .addGroup(javax.swing.GroupLayout.Alignment.TRAILING, topPanelLayout.createSequentialGroup() + .addComponent(toolBar, javax.swing.GroupLayout.PREFERRED_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.PREFERRED_SIZE) + .addGap(18, 18, 18) + .addComponent(panelCameraSelection, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, Short.MAX_VALUE) + .addGap(18, 18, 18) + .addComponent(pauseSelection, javax.swing.GroupLayout.PREFERRED_SIZE, 334, javax.swing.GroupLayout.PREFERRED_SIZE) + .addContainerGap()) + ); + topPanelLayout.setVerticalGroup( + topPanelLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.TRAILING) + .addGroup(topPanelLayout.createSequentialGroup() + .addGap(1, 1, 1) + .addGroup(topPanelLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.CENTER) + .addComponent(pauseSelection, javax.swing.GroupLayout.PREFERRED_SIZE, 29, javax.swing.GroupLayout.PREFERRED_SIZE) + .addComponent(toolBar, javax.swing.GroupLayout.PREFERRED_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.PREFERRED_SIZE) + .addComponent(panelCameraSelection, javax.swing.GroupLayout.PREFERRED_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.PREFERRED_SIZE))) + ); + + javax.swing.GroupLayout layout = new javax.swing.GroupLayout(this); + this.setLayout(layout); + layout.setHorizontalGroup( + layout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING) + .addGroup(layout.createSequentialGroup() + .addGroup(layout.createParallelGroup(javax.swing.GroupLayout.Alignment.TRAILING) + .addGroup(javax.swing.GroupLayout.Alignment.LEADING, layout.createSequentialGroup() + .addComponent(sidePanel, javax.swing.GroupLayout.PREFERRED_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.PREFERRED_SIZE) + .addPreferredGap(javax.swing.LayoutStyle.ComponentPlacement.RELATED) + .addComponent(renderer, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, Short.MAX_VALUE)) + .addGroup(javax.swing.GroupLayout.Alignment.LEADING, layout.createSequentialGroup() + .addContainerGap() + .addComponent(topPanel, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, Short.MAX_VALUE))) + .addContainerGap()) + ); + layout.setVerticalGroup( + layout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING) + .addGroup(layout.createSequentialGroup() + .addComponent(topPanel, javax.swing.GroupLayout.PREFERRED_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.PREFERRED_SIZE) + .addPreferredGap(javax.swing.LayoutStyle.ComponentPlacement.RELATED) + .addGroup(layout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING) + .addComponent(sidePanel, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, Short.MAX_VALUE) + .addComponent(renderer, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, Short.MAX_VALUE))) + ); + }// //GEN-END:initComponents + + private void buttonZoomFitActionPerformed(java.awt.event.ActionEvent evt) {//GEN-FIRST:event_buttonZoomFitActionPerformed + try { + renderer.setMode(RendererMode.Fit); + } catch (Exception ex) { + showException(ex); + } + }//GEN-LAST:event_buttonZoomFitActionPerformed + + private void buttonZoomStretchActionPerformed(java.awt.event.ActionEvent evt) {//GEN-FIRST:event_buttonZoomStretchActionPerformed + try { + renderer.setMode(RendererMode.Stretch); + } catch (Exception ex) { + showException(ex); + } + }//GEN-LAST:event_buttonZoomStretchActionPerformed + + private void buttonZoomNormalActionPerformed(java.awt.event.ActionEvent evt) {//GEN-FIRST:event_buttonZoomNormalActionPerformed + try { + renderer.setMode(RendererMode.Fixed); + centralizeRenderer(); + } catch (Exception ex) { + showException(ex); + } + }//GEN-LAST:event_buttonZoomNormalActionPerformed + + private void onChangeColormap(java.awt.event.ActionEvent evt) {//GEN-FIRST:event_onChangeColormap + try { + if ((camera != null) && (camera instanceof ColormapSource) && !updatingColormap) { + ColormapSource source = (ColormapSource) camera; + Color colorReticule = new Color(16, 16, 16); + Color colorMarker = new Color(128, 128, 128); + Colormap colormap = (Colormap) comboColormap.getSelectedItem(); + source.getConfig().colormap = (colormap == null) ? Colormap.Flame : colormap; + switch (source.getConfig().colormap) { + case Grayscale: + case Inverted: + case Red: + case Green: + case Blue: + colorReticule = new Color(0, 192, 0); + colorMarker = new Color(64, 255, 64); + break; + case Flame: + colorReticule = new Color(0, 192, 0); + colorMarker = new Color(64, 255, 64); + break; + } + + renderer.setPenReticle(new Pen(colorReticule)); + renderer.setPenProfile(new Pen(colorReticule, 0)); + renderer.setPenMarker(new Pen(colorMarker, 2)); + renderer.setShowReticle(false); + checkReticle(); + source.getConfig().colormapAutomatic = buttonAutomatic.isSelected(); + source.getConfig().colormapMin = buttonFullRange.isSelected() ? Double.NaN : (Integer) spinnerMin.getValue(); + source.getConfig().colormapMax = buttonFullRange.isSelected() ? Double.NaN : (Integer) spinnerMax.getValue(); + try { + source.getConfig().save(); + } catch (Exception ex) { + Logger.getLogger(getClass().getName()).log(Level.WARNING, null, ex); + } + source.refresh(); + if (buttonPause.isSelected()) { + updatePause(); + } + updateColormap(); + } + } catch (Exception ex) { + showException(ex); + } + }//GEN-LAST:event_onChangeColormap + + private void onChangeColormapRange(javax.swing.event.ChangeEvent evt) {//GEN-FIRST:event_onChangeColormapRange + onChangeColormap(null); + }//GEN-LAST:event_onChangeColormapRange + + private void buttonZoom025ActionPerformed(java.awt.event.ActionEvent evt) {//GEN-FIRST:event_buttonZoom025ActionPerformed + renderer.setZoom(0.25); + renderer.setMode(RendererMode.Zoom); + centralizeRenderer(); + }//GEN-LAST:event_buttonZoom025ActionPerformed + + private void buttonZoom05ActionPerformed(java.awt.event.ActionEvent evt) {//GEN-FIRST:event_buttonZoom05ActionPerformed + renderer.setZoom(0.5); + renderer.setMode(RendererMode.Zoom); + centralizeRenderer(); + }//GEN-LAST:event_buttonZoom05ActionPerformed + + private void buttonServerActionPerformed(java.awt.event.ActionEvent evt) {//GEN-FIRST:event_buttonServerActionPerformed + if (!usingServer) { + usingServer = true; + requestCameraListUpdate = true; + } + comboCamerasActionPerformed(null); + }//GEN-LAST:event_buttonServerActionPerformed + + private void buttonDirectActionPerformed(java.awt.event.ActionEvent evt) {//GEN-FIRST:event_buttonDirectActionPerformed + if (usingServer) { + usingServer = false; + requestCameraListUpdate = true; + } + comboCamerasActionPerformed(null); + }//GEN-LAST:event_buttonDirectActionPerformed + + private void comboScreenActionPerformed(java.awt.event.ActionEvent evt) {//GEN-FIRST:event_comboScreenActionPerformed + + comboScreen.setEnabled(false); + new Thread(new Runnable() { + @Override + public void run() { + ChannelInteger setpoint = null; + try { + int index = comboScreen.getSelectedIndex(); + if (index >= 0) { + if (cameraName.contains("DSRM")) { + setpoint = new ChannelInteger(null, cameraName + ":POSITION_SP"); + } else { + setpoint = new ChannelInteger(null, cameraName + ":SET_SCREEN1_POS"); + } + setpoint.initialize(); + Integer readback = setpoint.read(); + if ((readback == null) || (setpoint.read() != index)) { + setpoint.write(index); + //Must be threaded to control the laser because of sleep in setLaserState + /* + boolean laserOn = getLaserState(); + if (laserOn) { + setLaserState(false); + } + try { + setpoint.write(index); + } finally { + if (laserOn) { + setLaserState(true); + } + } + */ + } + screen.read(); + } + } catch (Exception ex) { + showException(ex); + } finally { + comboScreen.setEnabled(true); + if (setpoint != null) { + setpoint.close(); + } + } + } + }).start(); + }//GEN-LAST:event_comboScreenActionPerformed + + private void comboFilterActionPerformed(java.awt.event.ActionEvent evt) {//GEN-FIRST:event_comboFilterActionPerformed + try { + String setpoint = (String) comboFilter.getSelectedItem(); + if (setpoint != null) { + if (!setpoint.equals(filter.read())) { + filter.write(setpoint); + } + } + } catch (Exception ex) { + showException(ex); + } + }//GEN-LAST:event_comboFilterActionPerformed + + private void checkHistogramActionPerformed(java.awt.event.ActionEvent evt) {//GEN-FIRST:event_checkHistogramActionPerformed + try { + setHistogramVisible(checkHistogram.isSelected()); + } catch (Exception ex) { + showException(ex); + } + }//GEN-LAST:event_checkHistogramActionPerformed + + private void buttonZoom2ActionPerformed(java.awt.event.ActionEvent evt) {//GEN-FIRST:event_buttonZoom2ActionPerformed + renderer.setZoom(2.0); + renderer.setMode(RendererMode.Zoom); + centralizeRenderer(); + }//GEN-LAST:event_buttonZoom2ActionPerformed + + private void spinnerThresholdonChange(javax.swing.event.ChangeEvent evt) {//GEN-FIRST:event_spinnerThresholdonChange + if (!updatingServerControls) { + try { + if ((server != null) && (server.isStarted())) { + server.setThreshold((Double) spinnerThreshold.getValue()); + } + } catch (Exception ex) { + showException(ex); + updatePipelineControls(); + } + } + }//GEN-LAST:event_spinnerThresholdonChange + + private void checkBackgroundActionPerformed(java.awt.event.ActionEvent evt) {//GEN-FIRST:event_checkBackgroundActionPerformed + if (server != null) { + if (!updatingServerControls) { + try { + if (server.isStarted()) { + server.setBackgroundSubtraction(checkBackground.isSelected()); + } + } catch (Exception ex) { + showException(ex); + updatePipelineControls(); + updatingServerControls = true; + checkBackground.setSelected(false); + updatingServerControls = false; + + } + } + } else { + camera.setBackgroundEnabled(checkBackground.isSelected()); + } + }//GEN-LAST:event_checkBackgroundActionPerformed + + private void checkThresholdActionPerformed(java.awt.event.ActionEvent evt) {//GEN-FIRST:event_checkThresholdActionPerformed + if (!updatingServerControls) { + try { + if ((server != null) && (server.isStarted())) { + spinnerThreshold.setVisible(checkThreshold.isSelected()); + server.setThreshold(checkThreshold.isSelected() ? (Double) spinnerThreshold.getValue() : null); + } + } catch (Exception ex) { + showException(ex); + updatePipelineControls(); + } + } + }//GEN-LAST:event_checkThresholdActionPerformed + + private void checkGoodRegionActionPerformed(java.awt.event.ActionEvent evt) {//GEN-FIRST:event_checkGoodRegionActionPerformed + if (!updatingServerControls) { + try { + if ((server != null) && (server.isStarted())) { + goodRegion = checkGoodRegion.isSelected(); + setGoodRegionOptionsVisible(goodRegion); + if (goodRegion) { + server.setGoodRegion(((Number) spinnerGrThreshold.getValue()).doubleValue(), ((Number) spinnerGrScale.getValue()).doubleValue()); + } else { + server.setGoodRegion(null); + } + } + } catch (Exception ex) { + showException(ex); + updatePipelineControls(); + } + } + }//GEN-LAST:event_checkGoodRegionActionPerformed + + private void spinnerGrThresholdonChange(javax.swing.event.ChangeEvent evt) {//GEN-FIRST:event_spinnerGrThresholdonChange + if (!updatingServerControls) { + try { + if ((server != null) && (server.isStarted())) { + server.setGoodRegion((Double) spinnerGrThreshold.getValue(), (Double) spinnerGrScale.getValue()); + } + } catch (Exception ex) { + showException(ex); + updatePipelineControls(); + } + } + }//GEN-LAST:event_spinnerGrThresholdonChange + + private void btFixColormapRangeActionPerformed(java.awt.event.ActionEvent evt) {//GEN-FIRST:event_btFixColormapRangeActionPerformed + try { + updatingColormap = true; + ArrayProperties properties = currentFrame.data.getProperties(); + spinnerMax.setValue(properties.max.intValue()); + spinnerMin.setValue(properties.min.intValue()); + buttonManual.setSelected(true); + } catch (Exception ex) { + showException(ex); + } finally { + updatingColormap = false; + onChangeColormap(null); + } + }//GEN-LAST:event_btFixColormapRangeActionPerformed + + private void checkSlicingActionPerformed(java.awt.event.ActionEvent evt) {//GEN-FIRST:event_checkSlicingActionPerformed + if (!updatingServerControls) { + try { + if ((server != null) && (server.isStarted())) { + slicing = checkSlicing.isSelected(); + setSlicingOptionsVisible(slicing); + if (slicing) { + server.setSlicing((Integer) spinnerSlNumber.getValue(), (Double) spinnerSlScale.getValue(), spinnerSlOrientation.getValue().toString()); + } else { + server.setSlicing(null); + } + } + } catch (Exception ex) { + showException(ex); + updatePipelineControls(); + } + } + }//GEN-LAST:event_checkSlicingActionPerformed + + private void spinnerSlicingChange(javax.swing.event.ChangeEvent evt) {//GEN-FIRST:event_spinnerSlicingChange + if (!updatingServerControls) { + try { + if ((server != null) && (server.isStarted())) { + server.setSlicing((Integer) spinnerSlNumber.getValue(), (Double) spinnerSlScale.getValue(), spinnerSlOrientation.getValue().toString()); + } + } catch (Exception ex) { + showException(ex); + updatePipelineControls(); + } + } + }//GEN-LAST:event_spinnerSlicingChange + + private void buttonReticleActionPerformed(java.awt.event.ActionEvent evt) {//GEN-FIRST:event_buttonReticleActionPerformed + try { + checkReticle(); + } catch (Exception ex) { + showException(ex); + } + }//GEN-LAST:event_buttonReticleActionPerformed + + private void buttonFitActionPerformed(java.awt.event.ActionEvent evt) {//GEN-FIRST:event_buttonFitActionPerformed + try { + showFit = buttonFit.isSelected(); + if (showFit) { + renderer.setProfile(Renderer.Profile.None); + } else { + renderer.removeOverlays(fitOv); + fitOv = null; + } + } catch (Exception ex) { + showException(ex); + } + }//GEN-LAST:event_buttonFitActionPerformed + + private void buttonProfileActionPerformed(java.awt.event.ActionEvent evt) {//GEN-FIRST:event_buttonProfileActionPerformed + try { + showProfile = buttonProfile.isSelected(); + if (showProfile) { + renderer.setProfile(Renderer.Profile.None); + } else { + renderer.removeOverlays(profileOv); + profileOv = null; + } + } catch (Exception ex) { + showException(ex); + } + }//GEN-LAST:event_buttonProfileActionPerformed + + private void buttonMarkerActionPerformed(java.awt.event.ActionEvent evt) {//GEN-FIRST:event_buttonMarkerActionPerformed + try { + checkMarker(null); + } catch (Exception ex) { + showException(ex); + } + }//GEN-LAST:event_buttonMarkerActionPerformed + + private void buttonPauseActionPerformed(java.awt.event.ActionEvent evt) {//GEN-FIRST:event_buttonPauseActionPerformed + try { + if (!updatingButtons) { + setPaused(buttonPause.isSelected()); + } + } catch (Exception ex) { + showException(ex); + } + }//GEN-LAST:event_buttonPauseActionPerformed + + private void buttonGrabBackgroundActionPerformed(java.awt.event.ActionEvent evt) {//GEN-FIRST:event_buttonGrabBackgroundActionPerformed + try { + if (camera != null) { + boolean laserOn = getLaserState(); + OptionResult ret = null; + if (laserOn) { + ret = SwingUtils.showOption(getTopLevel(), "Capture Background", "Do you want to put laser on delay for capturing background?", OptionType.YesNoCancel); + if (ret == OptionResult.No) { + laserOn = false; + } + } else { + ret = SwingUtils.showOption(getTopLevel(), "Capture Background", "Do you want to capture background now?", OptionType.OkCancel); + } + + if (ret == OptionResult.Cancel) { + return; + } + + if (laserOn) { + setLaserState(false); + } + try { + System.out.println("Grabbing background for: " + cameraName); + if (server != null) { + server.captureBackground(5); + } else { + camera.captureBackground(5, 0); + } + } finally { + if (laserOn) { + setLaserState(true); + } + } + SwingUtils.showMessage(getTopLevel(), "Success", "Success capturing background", 5000); + } + } catch (Exception ex) { + showException(ex); + } + }//GEN-LAST:event_buttonGrabBackgroundActionPerformed + + private void buttonSaveActionPerformed(java.awt.event.ActionEvent evt) {//GEN-FIRST:event_buttonSaveActionPerformed + try { + saveSnapshot(); + } catch (Exception ex) { + Logger.getLogger(getClass().getName()).log(Level.WARNING, null, ex); + showException(ex); + } + }//GEN-LAST:event_buttonSaveActionPerformed + + private void buttonStreamDataActionPerformed(java.awt.event.ActionEvent evt) {//GEN-FIRST:event_buttonStreamDataActionPerformed + try { + showStreamData(); + } catch (Exception ex) { + showException(ex); + } + }//GEN-LAST:event_buttonStreamDataActionPerformed + + private void buttonSidePanelActionPerformed(java.awt.event.ActionEvent evt) {//GEN-FIRST:event_buttonSidePanelActionPerformed + sidePanel.setVisible(buttonSidePanel.isSelected()); + }//GEN-LAST:event_buttonSidePanelActionPerformed + + private void comboTypeActionPerformed(java.awt.event.ActionEvent evt) {//GEN-FIRST:event_comboTypeActionPerformed + try { + if (!updatingCameraSelection) { + updateCameraList(); + if ((cameraName != null) && (!cameraName.equals(comboCameras.getSelectedItem()))) { + setCamera(null); + } else { + setCamera(cameraName); + } + } + + } catch (Exception ex) { + ex.printStackTrace(); + } finally { + updateButtons(); + } + }//GEN-LAST:event_comboTypeActionPerformed + + private void comboCamerasActionPerformed(java.awt.event.ActionEvent evt) {//GEN-FIRST:event_comboCamerasActionPerformed + try { + if (!updatingCameraSelection) { + if (!comboCameras.isEnabled()) { + throw new Exception("Invalid state"); + } + comboCameras.setEnabled(false); + comboType.setEnabled(false); + buttonServer.setEnabled(false); + buttonDirect.setEnabled(false); + final String cameraName = (String) comboCameras.getSelectedItem(); + new Thread(new Runnable() { + @Override + public void run() { + if (requestCameraListUpdate) { + requestCameraListUpdate = false; + try { + updateCameraList(); + } catch (Exception ex) { + ex.printStackTrace(); + } + } + try { + setCamera(cameraName.trim().isEmpty() ? null : cameraName); + } catch (Exception ex) { + ex.printStackTrace(); + } finally { + updateButtons(); + comboCameras.setEnabled(true); + comboType.setEnabled(true); + buttonServer.setEnabled(true); + buttonDirect.setEnabled(true); + } + } + }).start(); + } + } catch (Exception ex) { + showException(ex); + } + }//GEN-LAST:event_comboCamerasActionPerformed + + private void buttonTitleActionPerformed(java.awt.event.ActionEvent evt) {//GEN-FIRST:event_buttonTitleActionPerformed + try { + manageTitleOverlay(); + } catch (Exception ex) { + showException(ex); + } finally { + } + }//GEN-LAST:event_buttonTitleActionPerformed + + private void buttonScaleActionPerformed(java.awt.event.ActionEvent evt) {//GEN-FIRST:event_buttonScaleActionPerformed + try { + renderer.setShowColormapScale(buttonScale.isSelected()); + } catch (Exception ex) { + showException(ex); + } + }//GEN-LAST:event_buttonScaleActionPerformed + + // Variables declaration - do not modify//GEN-BEGIN:variables + private javax.swing.JButton btFixColormapRange; + private javax.swing.JRadioButton buttonAutomatic; + private javax.swing.JRadioButton buttonDirect; + private javax.swing.JToggleButton buttonFit; + private javax.swing.JRadioButton buttonFullRange; + private javax.swing.JButton buttonGrabBackground; + private javax.swing.ButtonGroup buttonGroup1; + private javax.swing.ButtonGroup buttonGroup2; + private javax.swing.ButtonGroup buttonGroup3; + private javax.swing.ButtonGroup buttonGroup4; + private javax.swing.JRadioButton buttonManual; + private javax.swing.JToggleButton buttonMarker; + private javax.swing.JToggleButton buttonPause; + private javax.swing.JToggleButton buttonProfile; + private javax.swing.JToggleButton buttonReticle; + private javax.swing.JToggleButton buttonSave; + private javax.swing.JToggleButton buttonScale; + private javax.swing.JRadioButton buttonServer; + private javax.swing.JToggleButton buttonSidePanel; + private javax.swing.JButton buttonStreamData; + private javax.swing.JToggleButton buttonTitle; + private javax.swing.JRadioButton buttonZoom025; + private javax.swing.JRadioButton buttonZoom05; + private javax.swing.JRadioButton buttonZoom2; + private javax.swing.JRadioButton buttonZoomFit; + private javax.swing.JRadioButton buttonZoomNormal; + private javax.swing.JRadioButton buttonZoomStretch; + private javax.swing.JCheckBox checkBackground; + private javax.swing.JCheckBox checkGoodRegion; + private javax.swing.JCheckBox checkHistogram; + private javax.swing.JCheckBox checkSlicing; + private javax.swing.JCheckBox checkThreshold; + private javax.swing.JComboBox comboCameras; + private javax.swing.JComboBox comboColormap; + private javax.swing.JComboBox comboFilter; + private javax.swing.JComboBox comboScreen; + private javax.swing.JComboBox comboType; + private javax.swing.Box.Filler filler1; + private javax.swing.JLabel jLabel1; + private javax.swing.JLabel jLabel3; + private javax.swing.JLabel jLabel4; + private javax.swing.JLabel jLabel5; + private javax.swing.JPanel jPanel2; + private javax.swing.JPanel jPanel3; + private javax.swing.JPanel jPanel5; + private javax.swing.JProgressBar jProgressBar1; + private javax.swing.JToolBar.Separator jSeparator6; + private javax.swing.JLabel labelGrScale; + private javax.swing.JLabel labelGrThreshold; + private javax.swing.JLabel labelMax; + private javax.swing.JLabel labelMin; + private javax.swing.JLabel labelSlNumber; + private javax.swing.JLabel labelSlOrientation; + private javax.swing.JLabel labelSlScale; + private javax.swing.JPanel panelCameraSelection; + private javax.swing.JPanel panelFilter; + private javax.swing.JPanel panelScreen; + private javax.swing.JPanel panelScreen2; + private javax.swing.JPanel panelSlicing; + private ch.psi.pshell.swing.ValueSelection pauseSelection; + private ch.psi.pshell.imaging.Renderer renderer; + private javax.swing.JPanel sidePanel; + private javax.swing.JSpinner spinnerGrScale; + private javax.swing.JSpinner spinnerGrThreshold; + private javax.swing.JSpinner spinnerMax; + private javax.swing.JSpinner spinnerMin; + private javax.swing.JSpinner spinnerSlNumber; + private javax.swing.JSpinner spinnerSlOrientation; + private javax.swing.JSpinner spinnerSlScale; + private javax.swing.JSpinner spinnerThreshold; + private javax.swing.JTextField textState; + private javax.swing.JToolBar toolBar; + private javax.swing.JPanel topPanel; + private ch.psi.pshell.swing.DeviceValuePanel valueFilter; + private ch.psi.pshell.swing.DeviceValuePanel valueScreen; + // End of variables declaration//GEN-END:variables +} diff --git a/plugins/resources/Scale.png b/plugins/resources/Scale.png new file mode 100644 index 0000000..2aafd9f Binary files /dev/null and b/plugins/resources/Scale.png differ diff --git a/script/RFscan/GunEnergyScan.py b/script/RFscan/GunEnergyScan.py new file mode 100644 index 0000000..ab25774 --- /dev/null +++ b/script/RFscan/GunEnergyScan.py @@ -0,0 +1,166 @@ +import ch.psi.pshell.epics.Positioner as Positioner + +dry_run = False +do_elog = True +is_panel = get_exec_pars().source != CommandSource.ui #must be check before run +USE_SCREEN_PANEL = False + +run("CPython/wrapper") +#Parameters +if is_panel: + start = args[0] + stop = args[1] + step = args[2] + nb = int(args[3]) + lat = args[4] + disp = args[5] + p0 = args[6] + plt = args[7] + thr = args[8] +else: + start = 85.0 + stop = 95.0 + step = 0.5 + nb = 3 + lat = 0.15 + disp = -0.387 + p0 = 7.1 + plt = plot(None, title="Output")[0] + thr = 500 + +A = p0 / disp / 1e6 +B = p0 + +#Plot setup +plt.clear() +plt.removeMarker(None) +plt.setStyle(plt.Style.ErrorY) +plt.addSeries(LinePlotErrorSeries("Momentum", Color.red)) +plt.addSeries(LinePlotErrorSeries("Momentum Spread", Color.yellow, 2)) +plt.getAxis(plt.AxisId.X).setLabel("Gun Beam Phase (deg)") +plt.getAxis(plt.AxisId.Y).setLabel("Momentum (MeV/c)") +plt.getAxis(plt.AxisId.Y2).setLabel("Momentum Spread (MeV/c)") +plt.setLegendVisible(True) + +#Creating Phase positioner +if dry_run: + phase = Positioner("Gun Phase", "SINEG01-RSYS:SET-BEAM-PHASE-SIM", "SINEG01-RSYS:SET-BEAM-PHASE-SIM") + camera_name = "simulation" +else: + phase = Positioner("Gun Phase", "SINEG01-RSYS:SET-BEAM-PHASE", "SINEG01-RSYS:GET-BEAM-PHASE") + camera_name = "SINBD01-DSCR010" +phase.config.minValue = -90.0 +phase.config.maxValue = 360.0 +phase.config.precision = 4 +phase.config.resolution = 0.5 +phase.config.rotation = True +phase.config.save() +phase.initialize() +phase0 = phase.read() % 360 + +#Camera setup +if USE_SCREEN_PANEL: + cam_server.start(camera_name+"_sp1", True) #True for shared pipeline +else: + cam_server.start(camera_name) +wait_cam_server_message() +x = cam_server.stream.getChild("x_center_of_mass") +dx = cam_server.stream.getChild("x_rms") +cam_server.setThreshold(thr) +cam_server.setBackgroundSubtraction(False) + +#Creating averagers +x_averager = create_averager(x, nb, -1) # -1 event based, waits for the next value +dx_averager = create_averager(dx, nb, -1) +dx_averager.monitored = True # not blocking, will return last nb values + +#Record callback: uptate of output plot +def after_sample(record, scan): + global A, B, plt + x_pos_mean, x_pos_stdev = record.values[0].mean, record.values[0].stdev + x_width_mean, x_width_stdev = record.values[1].mean, record.values[1].stdev + p_mean, p_stdev = A * x_pos_mean + B, abs(A) * x_pos_stdev + dp_mean, dp_stdev = abs(A) * x_width_mean, abs(A) * x_width_stdev + phase = ((record.positions[0] + 90) % 360) - 90 if start < 0 else record.positions[0] + plt.getSeries(0).appendData(phase, p_mean, p_stdev) + plt.getSeries(1).appendData(phase, dp_mean, dp_stdev) + +#The scan loop +try: + phase.write(start) + time.sleep(2.0) + r = lscan(phase, [x_averager, dx_averager], start, stop, step , latency=lat, after_read = after_sample) +finally: + phase.write(phase0) + phase.close() + cam_server.stop() # stops cam_server but does not close it cam_server is a global object + +ph = r.getPositions(0) +if start < 0: + ph = [((val + 90) % 360) -90 for val in ph ] +p = [A * val.mean + B for val in r.getReadable(0)] +dp = [abs(A) * val.mean for val in r.getReadable(1)] + +#Fitting and plotting +try: + i = p.index(max(p)) + a, b = max(i-6, 0), min(i+6, len(p)) + (ph_p_max, p_max, ph_p_fit, p_fit, p_R2) = extremum(ph[a:b], p[a:b]) + i = dp.index(min(dp)) + a, b = max(i-6, 0), min(i+6, len(dp)) + (ph_dp_min, dp_min, ph_dp_fit, dp_fit, dp_R2) = extremum(ph[a:b], dp[a:b]) + plt.addSeries(LinePlotErrorSeries("Momentum Fit", plt.getSeries(0).color)) + plt.addSeries(LinePlotErrorSeries("Momentum Spread Fit", plt.getSeries(1).color, 2)) + plt.getSeries(2).setData(ph_p_fit, p_fit) + plt.getSeries(3).setData(ph_dp_fit, dp_fit) + plt.getSeries(2).setPointsVisible(False) + plt.getSeries(3).setPointsVisible(False) + plt.addMarker(ph_p_max, plt.AxisId.X, "%3.2f" % ph_p_max, plt.getSeries(0).color) + plt.addMarker(ph_dp_min, plt.AxisId.X, "%3.2f" % ph_dp_min, plt.getSeries(1).color) +except: + raise Exception("Fit failure") + +# Calculating laser offset in deg +las_offset_deg = ph_dp_min - 90.0 + +#Saving metadata +save_dataset( "scan 1/processed/p" , p ) +set_attribute( "scan 1/processed/p" , "p max" , p_max ) +set_attribute( "scan 1/processed/p" , "p max phase" , ph_p_max ) +set_attribute( "scan 1/processed/p" , "p fit R2" , p_R2 ) +set_attribute( "scan 1/processed/p" , "Unit" , "MeV" ) + +save_dataset( "scan 1/processed/dp" , dp ) +set_attribute( "scan 1/processed/dp" , "dp min" , dp_min ) +set_attribute( "scan 1/processed/dp" , "dp min phase" , ph_dp_min ) +set_attribute( "scan 1/processed/dp" , "dp fit R2" , dp_R2 ) +set_attribute( "scan 1/processed/dp" , "Unit" , "MeV" ) + +#Elog entry +if do_elog: + if get_option("Generated data file:\n" + get_exec_pars().path +"\n\n" + "Save to ELOG?", "YesNo") == "Yes": + title = "Gun Energy Scan" + Laser = str(caget("SLG-LGEN:WHICH_LASER")) + log_msg = "Data file: " + get_exec_pars().path + "\n\n" + log_msg = log_msg + "Laser: " + Laser + "\n" + if Laser == "Alcor": + log_msg = log_msg + "Energy plate Alcor: %0.2f" % caget("SLGTH01-LMRM-M074:MOT.RBV") + " deg \n" + elif Laser == "Jaguar": + log_msg = log_msg + "Energy plate Jaguar: %0.2f" % caget("SLGJG-LMRM-M031:MOT.RBV") + " deg \n" + elif Laser == "Both": + log_msg = log_msg + "Energy plate Alcor: %0.2f" % caget("SLGTH01-LMRM-M074:MOT.RBV") + " deg \n" + log_msg = log_msg + "Energy plate Jaguar: %0.2f" % caget("SLGJG-LMRM-M031:MOT.RBV") + " deg \n" + if caget("SLGTV-LMTO-M053:MOT-ACT-POS") == "IRIS": + log_msg = log_msg + "Collimator: IRIS %0.2f" % caget("SLGTV-LAPP:SIZE-GET") + " mm \n" + else: + log_msg = log_msg + "Collimator: " + str(caget("SLGTV-LMTO-M053:MOT-ACT-POS")) + "\n" + log_msg = log_msg + "Charge B1: %0.2f" % caget("SINEG01-DICT215:B1_CHARGE-OP") + " pC at %0.2f" % phase0 + " deg beam phase\n" + log_msg = log_msg + "Charge B2: %0.2f" % caget("SINEG01-DICT215:B2_CHARGE-OP") + " pC at %0.2f" % phase0 + " deg beam phase\n" + log_msg = log_msg + "p-max: %0.2f" % p_max + " MeV/c at %0.2f" % ph_p_max + " deg beam phase\n" + log_msg = log_msg + "dp-min: %0.4f" % dp_min + " MeV/c at %0.2f" % ph_dp_min + " deg beam phase\n" + sleep(0.1) #Give some time to plot to be finished - it is not sync with acquisition + file_name = os.path.abspath(get_context().setup.getContextPath() + "/GunEnergyScanPlot.png") + plt.saveSnapshot(file_name , "png") + elog(title, log_msg, [file_name,]) + +set_return([ph_dp_min, las_offset_deg]) \ No newline at end of file diff --git a/script/RFscan/GunEnergyScanLasSet.py b/script/RFscan/GunEnergyScanLasSet.py new file mode 100644 index 0000000..38f4556 --- /dev/null +++ b/script/RFscan/GunEnergyScanLasSet.py @@ -0,0 +1,38 @@ +dry_run = False +do_elog = True + +if get_exec_pars().source == CommandSource.ui: + las_offset_deg = 0.0 + plt = None +else: + las_offset_deg = args[0] + plt = args[1] +Laser = caget("SLG-LGEN:WHICH_LASER") +cur_las_delay = 0.0 +if Laser == "Alcor": + cur_las_delay = caget("SLGOS01-TSPL-ALC:CURR_DELTA_T") +elif Laser == "Jaguar": + cur_las_delay = caget("SLGJG-TSPL-JAG:CURR_DELTA_T") +new_las_delay = cur_las_delay - 333.467 * las_offset_deg / 360.0 +if not dry_run: + if Laser == "Alcor": + caput("SLGOS01-TSPL-ALC:NEW_DELTA_T" , new_las_delay ) + caput("SLGOS01-TSPL-ALC:SET_NEW_PHASE.PROC" , 1 ) + elif Laser == "Jaguar": + caput("SLGJG-TSPL-JAG:NEW_DELTA_T" , new_las_delay ) + caput("SLGJG-TSPL-JAG:SET_NEW_PHASE.PROC" , 1 ) +if do_elog: + title = "Set laser delay" + log_msg = "" + if Laser == "Alcor": + log_msg = "SLGOS01-TSPL-ALC:NEW_DELTA_T: %12.4f" % new_las_delay + " ps (was %12.4f" % cur_las_delay + " ps)\n" + elif Laser == "Jaguar": + log_msg = "SLGJG-TSPL-JAG:NEW_DELTA_T: %12.4f" % new_las_delay + " ps (was %12.4f" % cur_las_delay + " ps)\n" + attachments = [] + if plt is not None: + sleep(0.1) #Give some time to plot to be finished - it is not sync with acquisition + file_name = os.path.abspath(get_context().setup.getContextPath() + "/GunEnergyScanLasSet.png") + plt.saveSnapshot(file_name , "png") + attachments = [file_name] + elog(title, log_msg, attachments) +show_message("Success setting laser delay") diff --git a/script/RFscan/GunEnergyScanNew.py b/script/RFscan/GunEnergyScanNew.py index f78f5f9..ad1750a 100644 --- a/script/RFscan/GunEnergyScanNew.py +++ b/script/RFscan/GunEnergyScanNew.py @@ -65,10 +65,10 @@ else: wait_cam_server_message() x = cam_server.stream.getChild("x_center_of_mass") dx = cam_server.stream.getChild("x_rms") -cam_server.setThreshold(500) +cam_server.setThreshold(150) #cam_server.captureBackground(10) #Capturing background cam_server.setBackgroundSubtraction(False) -#cam_server.setRoi([144,482,1431,706]) #X, Y, W, H # something wrong thereto be fixed +#cam_server.setRoi([144,482,1431,706]) #X, Y, W, H # something wrong there to be fixed #Creating averagers x_averager = create_averager(x, nb, -1) # -1 event based, waits for the next value diff --git a/script/RFscan/GunEnergyScanRfSet.py b/script/RFscan/GunEnergyScanRfSet.py new file mode 100644 index 0000000..03fb403 --- /dev/null +++ b/script/RFscan/GunEnergyScanRfSet.py @@ -0,0 +1,25 @@ +dry_run = False +do_elog = True + +if get_exec_pars().source == CommandSource.ui: + bph_ref_user = 90.0 + plt = None +else: + bph_ref_user = args[0] + plt = args[1] +phase_offset_old = caget("SINEG01-RSYS:SET-VSUM-PHASE-OFFSET-BASE") +phase_offset_new = phase_offset_old - (bph_ref_user - 90.0) +if not dry_run: + caput("SINEG01-RSYS:SET-VSUM-PHASE-OFFSET-BASE" , phase_offset_new ) + caput("SINEG01-RSYS:CMD-LOAD-CALIB-BEAM" , 1 ) +if do_elog: + title = "Set gun phase" + log_msg = "SINEG01-RSYS:SET-VSUM-PHASE-OFFSET-BASE: %8.2f" % phase_offset_new + " deg (was %8.2f" % phase_offset_old + " deg)\n" + attachments = [] + if plt is not None: + sleep(0.1) #Give some time to plot to be finished - it is not sync with acquisition + file_name = os.path.abspath(get_context().setup.getContextPath() + "/GunEnergyScanRfSet.png") + plt.saveSnapshot(file_name , "png") + attachments = [file_name] + elog(title, log_msg, attachments) +show_message("Success setting phase reference") diff --git a/script/test/BLM_raw_signal_plot.py b/script/test/BLM_raw_signal_plot.py new file mode 100644 index 0000000..fefeaae --- /dev/null +++ b/script/test/BLM_raw_signal_plot.py @@ -0,0 +1,19 @@ +run("Devices/Elements") +blms = get_blms() #["S10BC01-DBLM065"] + +plots = [] +names = [] +for b in blms: + try: + b = b + ":LOSS_SIGNAL_RAW" + plots.append(caget(b)) + names.append (b) + except: + print "Error reading " + str(b) + +plot(plots, names) + + +#plots = get_plot_snapshots() +#print plots +##elog("BLM PMT-waveform", "", plots) \ No newline at end of file