From c43a30fb50af903cc64b588313b48e8c61dc1d74 Mon Sep 17 00:00:00 2001
From: gac-S_Changer <gac-S_Changer@PC12288.psi.ch>
Date: Wed, 14 Sep 2016 16:48:48 +0200
Subject: [PATCH] Script execution

---
 script/imgtest.py | 40 ++++++++++++++++++++++------------------
 1 file changed, 22 insertions(+), 18 deletions(-)

diff --git a/script/imgtest.py b/script/imgtest.py
index 6f2256c..29cf222 100644
--- a/script/imgtest.py
+++ b/script/imgtest.py
@@ -8,29 +8,33 @@ import java.awt.Color as Color
 #Image Loading
 ip = load_image("{images}/test2.png", title="Image")
 
-aux = ip.duplicate()
-aux.show()
-grayscale(aux)
-gaussian_blur(aux); aux.repaintWindow()
 
-#invert(aux); aux.repaintWindow()
-#smooth(aux); aux.repaintWindow()
-#sharpen(aux); aux.repaintWindow()
-
-
-#Histogram
+"""
+#Puck Detection
+aux = grayscale(ip, in_place=False)
+aux.show() 
 plot(get_histogram(aux))
 
-
-
-
-auto_threshold(aux)
-invert(aux)
+subtract_background(aux)
+threshold(aux,0,50); aux.repaintWindow()
 binary_fill_holes(aux); aux.repaintWindow()
-#binary_fill_holes(aux)
-#aux.show()
-(results,output_img)=analyse_particles(aux, 400,1000, 
+(results,output_img)=analyse_particles(aux, 10000,50000, 
             fill_holes = False, exclude_edges = True,print_table=True,
             output_image = "outlines", minCirc = 0.0, maxCirc = 1.0)
 output_img.show()
+"""
+
+#Sample detection
+aux = grayscale(ip, in_place=False)
+aux.show() 
+#gaussian_blur(aux); aux.repaintWindow()
+invert(aux); aux.repaintWindow()
+subtract_background(aux); aux.repaintWindow()
+auto_threshold(aux); aux.repaintWindow()
+binary_open(aux); aux.repaintWindow()
+#binary_fill_holes(aux); aux.repaintWindow()
+(results,output_img)=analyse_particles(aux, 250,1000, 
+            fill_holes = False, exclude_edges = True,print_table=True,
+            output_image = "outlines", minCirc = 0.7, maxCirc = 1.0)
+output_img.show()