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dev/script/corr.py
2018-01-19 10:56:53 +01:00

60 lines
2.0 KiB
Python
Executable File

import math
from mathutils import fit_polynomial, PolynomialFunction
from plotutils import plot_line, plot_function
import org.apache.commons.math3.stat.correlation.PearsonsCorrelation as PearsonsCorrelation
if get_exec_pars().source == CommandSource.ui:
dx = sin
dy = isin
interval = 0.10
window = 40
p = plot(None, "Data")[0]
if isinstance(dx, basestring): dx = Channel(dx)
if isinstance(dy, basestring): dy = Channel(dy)
sd=p.getSeries(0)
sd.setLinesVisible(False)
sd.setPointSize(4)
marker=None
while(True):
#Sample and plot data
x=dx.read()
y=dy.read()
sd.appendData(x, y)
if len(sd.x) > window:
#Remove First Element
sd.token.remove(0)
ax = sd.x
ay = sd.y
if len(ax)>2:
x1, x2 = min(ax), max(ax)
res = (x2-x1)/100
if x1!=x2:
#Display correlation
corr= PearsonsCorrelation().correlation(to_array(ax,'d'), to_array(ay,'d'))
s = "Correlation=" + str(round(corr,4))
#print s
if marker is not None:
p.removeMarker(marker)
marker = p.addMarker(x2+res, p.AxisId.X, s, p.getBackground())
marker.setLabelPaint(Color.BLACK)
#Calculate, print and plot linear fit
pars_lin = (a0,a1) = fit_polynomial(ay, ax, 1)
#print "Fit lin a1:" , a1, " a0:",a0
y1 = poly(x1, pars_lin)
y2 = poly(x2, pars_lin)
plot_line(p, x1, y1, x2, y2, width = 2, color = Color.BLUE, name = "Fit Linear")
#Calculate, print and plot quadratic fit
pars_quad = (a0,a1,a2) = fit_polynomial(ay, ax, 2)
#print "Fit quad a2:" , a2, "a1:" , a1, " a0:",a0
fitted_quad_function = PolynomialFunction(pars_quad)
ax = frange(x1, x2, res, True)
plot_function(p, fitted_quad_function, "Fit Quadratic", ax, color=Color.GREEN)
time.sleep(interval)