Startup

script/test/TestBool.py

@@ -0,0 +1,8 @@
+#Creating a 1D dataset from an array
+path="group/data1"
+data1d = [True, False, False, True, True, False, False]
+save_dataset(path, data1d, 'z')
+
+read =load_data(path)
+print read.tolist()
+assert data1d==read.tolist()

script/test/TestChannel.py

@@ -0,0 +1,4 @@
+c=Channel("TESTIOC:TESTCALCOUT:Input")
+c.read()
+
+append_dataset(path, data, index = None, type = d, shape = None)

script/test/TestDel.py

@@ -0,0 +1,26 @@
+import java.lang.System as System
+import org.python.core.finalization.FinalizablePyObject as FinalizablePyObject
+import org.python.core.finalization.FinalizeTrigger as FinalizeTrigger
+import org.python.core.finalization.FinalizableBuiltin as FinalizableBuiltin
+import org.python.core.PyInstance as PyInstance
+#import org.python.core.PyFinalizableInstance as PyFinalizableInstance
+
+class Employee(FinalizablePyObject): 
+  
+    def __init__(self): 
+        print('__init__') 
+  
+    def __del__(self): 
+        print("__del__", self) 
+        
+    def finalize(self): pass #TODO: if not overriden, __del__ is not called!!!
+
+for i in range (100):   
+    obj = Employee()     
+    time.sleep(0.01)
+    System.gc()
+
+#del obj 
+System.gc()
+
+

script/test/TestDel2.py

@@ -0,0 +1,21 @@
+import java.lang.System as System
+"""
+def x():
+    c=Channel("TESTIOC:TESTCALCOUT:Input", alias = "asd")
+    c=Channel("TESTIOC:TESTCALCOUT:Input")
+    for i in range(1):
+        x=Channel("TESTIOC:TESTCALCOUT:Input")
+
+
+x()
+
+import java.lang.System as System
+"""
+System.gc()
+print "---"
+c=Channel("TESTIOC:TESTCALCOUT:Input")
+print "!!!"
+
+#r=tscan(c,10,0.1)
+c=None
+System.gc()

script/test/TestLscan.py

@@ -0,0 +1 @@
+r=lscan(out,(inp, sin, dp, arr1), 0,10, 10,print_scan=True)

script/test/TestStdev.py

@@ -0,0 +1,62 @@
+from ijutils import *
+import ch.psi.pshell.imaging.Filter as Filter
+from ch.psi.pshell.imaging.Utils import *
+from ch.psi.pshell.imaging.Overlays import *
+import ch.psi.pshell.imaging.Pen as Pen
+
+class MetricsFilter(Filter):
+    def __init__(self, metrics):        
+        self.overlay = Text(Pen(java.awt.Color.GREEN.darker()), "", \
+            java.awt.Font("Verdana", java.awt.Font.PLAIN, 12), java.awt.Point(20,20))
+        self.metrics = metrics
+        self.source = None
+        self.renderer = None
+        
+    def process(self, image, data):
+        try:
+            ip = load_array(data.array, data.width, data.height)
+            msg = ""
+            if self.metrics is not None:
+                for metric in self.metrics:
+                    val = IJ.getValue(ip,metric)
+                    msg = msg + "%s = %1.4f\n" % (metric,val)
+            self.overlay.update(msg)
+        except:
+            self.overlay.update(str(sys.exc_info()[1]))
+        return image
+
+    def start(self, source, renderer=None):
+        self.stop()
+        self.source = source
+        self.renderer = renderer if (renderer is not None) else show_panel(source)
+        self.source.setFilter(self)  
+        self.renderer.addOverlay(self.overlay)
+
+    def stop(self):
+        if self.renderer is not None:
+            self.renderer.removeOverlay(self.overlay)
+        if self.source is not None:
+            self.source.setFilter(None)   
+        self.source = None
+        self.renderer = None
+
+filter_metrics = None
+
+def start_metrics(metrics, source, renderer=None):
+    global filter_metrics
+    stop_metrics()
+    filter_metrics = MetricsFilter(metrics)
+    filter_metrics.start(source, renderer)
+    
+def stop_metrics():
+    global filter_metrics
+    if filter_metrics is not None:
+        filter_metrics.stop()
+    filter_metrics = None
+
+metrics = ["Area", "Mean", "StdDev", "Mode", "Min", "Max", "X", "Y", "XM", "YM", "Perim.", "BX", "BY", "Width", "Height", "Major", "Minor", "Angle", "Circ.", "Feret", "IntDen", "Median", "Skew", "Kurt", "%Area", "RawIntDen", "Ch", "Slice", "Frame", "FeretX", "FeretY", "FeretAngle", "MinFeret", "AR", "Round", "Solidity", "MinThr", "MaxThr"]
+
+#start_metrics (["StdDev"], src1)
+start_metrics (metrics, src1)
+time.sleep(5.0)
+stop_metrics()

script/test/TestTab.py

@@ -0,0 +1,17 @@
+import ch.psi.utils.swing.TextEditor as TextEditor
+import ch.psi.pshell.ui.App as App
+
+title="CXXC3"
+
+editor = TextEditor();
+tabpane = App.getInstance().getMainFrame().getLeftTab();  
+App.getInstance().getMainFrame().openComponent(title, editor, tabpane)
+for i in range(App.getInstance().getMainFrame().getLeftTab().getTabCount()):
+    t=App.getInstance().getMainFrame().getLeftTab().getTabComponentAt(i)
+    if t:
+        if t.getLabel().getText() == title:
+            for  l in t.getLabel().getMouseListeners():
+                print l
+                t.getLabel().removeMouseListener(l)
+
+

script/test/Testregion.py

@@ -0,0 +1,35 @@
+def get_calc_group():
+    return  get_exec_pars().group + "calc/"
+
+xx=None
+def after_readout(rec):
+    global xx
+    xx=rec
+    print ("----")
+    print rec[0],rec[1]
+    print rec.getValue("sin"),rec.getValue("out")
+    print rec.getValue(sin),rec.getValue(out)
+    print rec.getSetpoint("inp"),rec.getSetpoint(inp),rec.getSetpoint(0)
+    print rec.getPosition("inp"),rec.getPosition(inp),rec.getPosition(0)
+    if get_exec_pars().persist:  #This is not to write if "save=False” is set in the scan command
+        if rec.index == 0:
+             create_dataset(get_calc_group() + "Value1")
+        append_dataset(get_calc_group() + "Value1", rec) #The calculated value
+
+#set_exec_pars(layout="sf")
+
+def before_region(i):
+    print i
+
+#r1 = rscan(inp, (sin,out) , [(0,5,5), (10,15,20), (20,25,5)] , 0.01, passes = 3, zigzag = True, before_region=before_region, after_read=after_readout)   
+#set_attribute("/", "Test", 1)
+
+r1 = rscan(inp, (sin,out,arr) , [(0,5,5), (10,15,20), (20,25,5)] , 0.01, passes = 3, zigzag = True)   
+print r1.getReadable(sin)
+
+"""
+r2 = rscan(inp, (sin,out,arr) , [(0,5,5), (10,15,20), (20,25,5)] , 0.01, passes = 3, zigzag = True, keep=False, setpoints=True)   
+print r2.getReadable(sin)
+print r2.getPositions(inp)
+print r2.getSetpoints(inp)
+"""

script/test/test7.xml

@@ -1,5 +1,5 @@
 <?xml version="1.0" encoding="UTF-8" standalone="yes"?>
-<configuration xmlns="http://www.psi.ch/~ebner/models/scan/1.0" numberOfExecution="1" failOnSensorError="true">
+<configuration xmlns="http://www.psi.ch/~ebner/models/scan/1.0" numberOfExecution="2" failOnSensorError="true">
     <notification>
         <recipient error="true" success="false">alexandre.gobbo@psi.ch</recipient>
     </notification>
@@ -10,7 +10,7 @@
         <dimension zigzag="false" dataGroup="false">
             <positioner xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:type="LinearPositioner" name="TESTIOC:TESTCALCOUT:Input" asynchronous="false" id="id278043">
                 <start>0.0</start>
-                <end>31.0</end>
+                <end>3.0</end>
                 <stepSize>0.1</stepSize>
             </positioner>
             <action xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:type="ScriptAction">