From 7c0687916f99929df473ecd9ad24a134b75a2b95 Mon Sep 17 00:00:00 2001
From: Alexandre Gobbo <alexandre.gobbo@psi.ch>
Date: Fri, 16 Aug 2019 11:20:03 +0200
Subject: [PATCH] Script execution

---
 script/ms/test.py | 27 +++++++++++++++++++++++++--
 1 file changed, 25 insertions(+), 2 deletions(-)

diff --git a/script/ms/test.py b/script/ms/test.py
index acdcfc3..d10a012 100644
--- a/script/ms/test.py
+++ b/script/ms/test.py
@@ -1,3 +1,26 @@
+tmp_file = get_context().setup.expandPath("{images}/px.img")
+threshold1, threshold2, threshold3, threshold4 = 40, 500, 8000, 100000
+PIX_COLOR_DEPTH = 32
+PIX_XDIM = 487
+PIX_YDIM = 195
+image_header_length = 0
+roi = [0, 0, 486, 194]
+bkroi = [0, 0, 486, 194]
+filter_median = True
+filter_nsigma = 30
+
 ret = img_get_int(tmp_file, threshold1, threshold2, threshold3, threshold4, \
-              self.pixel.image_header_length, self.pixel.PIX_XDIM, self.pixel.PIX_YDIM,self.pixel.PIX_COLOR_DEPTH, \
-              roi[0], roi[1], roi[2], roi[3], bkroi[0], bkroi[1], bkroi[2], bkroi[3], filter_median = True, filter_nsigma = 30)
+              image_header_length, PIX_XDIM, PIX_YDIM,PIX_COLOR_DEPTH, \
+              roi[0], roi[1], roi[2], roi[3], bkroi[0], bkroi[1], bkroi[2], bkroi[3], filter_median = filter_median, filter_nsigma = filter_nsigma)
+
+(I_sum, area_I, thresh1_count, thresh2_count, thresh3_count, thresh4_count, I_sum_bgr, area_bgr) = ret
+
+
+print "I_sum=",I_sum
+print "area_I=",area_I
+print "thresh1_count=",thresh1_count
+print "thresh2_count=",thresh2_count
+print "thresh3_count=",thresh3_count
+print "thresh4_count=",thresh4_count
+print "I_sum_bgr=",I_sum_bgr
+print "area_bgr=",area_bgr