diff --git a/PSSS-data.md b/PSSS-data.md index da3dbe5..83749a0 100644 --- a/PSSS-data.md +++ b/PSSS-data.md @@ -13,9 +13,31 @@ All PSSS data channels are listed in the following sheet: | SARFE10-PSSS059:**AVG*** | Data calculated from average (not single shot) spectra | ## Concepts -**Width and centre** +**Width and center** -Spectral width and central energy are calculated by both a Gaussian fit and directly from the spectra. Depending on the spectral intensity profile, the Gaussian may return a poor representation of the spectra, for example for a spectral with a long tail. +Spectral width and central energy are calculated by both a Gaussian fit and directly from the spectra. Depending on the spectral intensity profile, the Gaussian may return a poor representation of the spectra, for example for a spectral with a long tail. Before both fitting and calculation the spiky single shot spectra are smoothed with a savgol filter: + +``` +# smooth the spectrum with savgol filter with 51 window size and 3rd order polynomial +smoothed_spectrum = scipy.signal.savgol_filter(spectrum, 51, 3) +``` + +The standard deviation and center of mass for the spectra are calculated as: + +``` +smoothed_spectrum_normed = smoothed_spectrum / np.sum(smoothed_spectrum) +spectrum_com = np.sum(axis * smoothed_spectrum_normed) +spectrum_std = np.sqrt(np.sum((axis - spectrum_com) ** 2 * smoothed_spectrum_normed)) +``` **Relative energy spread** -Channels ending in **RES** are a measure of the relative energy spread in units of ‰. For FIT data the relative energy spread is calculated as: $$2.355*\sigma\div\mu$$ \ No newline at end of file + +Channels ending in **RES** are a measure of the relative energy spread in units of ‰. For **FIT** data the relative energy spread is calculated as: + +$`\frac{2.355*\sigma}{\mu}`$ + +and for directly calculated values (**SPECT**): + +$`\frac{2.355*RMS}{\text{Center of mass}}`$ + +where the factor or 2.355 is included to allow these values to be comparable. \ No newline at end of file