140 lines
4.3 KiB
Python
140 lines
4.3 KiB
Python
"""
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@package tests.test_project
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unit tests for pmsco.project.
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the purpose of these tests is to help debugging the code.
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to run the tests, change to the directory which contains the tests directory, and execute =nosetests=.
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@pre nose and mock must be installed.
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@author Matthias Muntwiler, matthias.muntwiler@psi.ch
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@copyright (c) 2015-18 by Paul Scherrer Institut @n
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Licensed under the Apache License, Version 2.0 (the "License"); @n
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you may not use this file except in compliance with the License.
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You may obtain a copy of the License at
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http://www.apache.org/licenses/LICENSE-2.0
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"""
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from __future__ import absolute_import
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from __future__ import division
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from __future__ import print_function
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import mock
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import numpy as np
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import os
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import unittest
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import pmsco.data as data
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import pmsco.dispatch as dispatch
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import pmsco.project as project
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class TestScan(unittest.TestCase):
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"""
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test case for @ref pmsco.project.Scan class
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"""
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def test_import_scan_file(self):
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base_dir = os.path.dirname(os.path.abspath(__file__))
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test_file = os.path.join(base_dir, "..", "projects", "twoatom", "twoatom_energy_alpha.etpai")
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scan = project.Scan()
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scan.import_scan_file(test_file, "C", "1s")
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mode = ['e', 'a']
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self.assertEqual(scan.mode, mode)
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ae = np.arange(10, 1005, 5)
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at = np.asarray([0])
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ap = np.asarray([0])
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aa = np.arange(-90, 91, 1)
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np.testing.assert_array_almost_equal(scan.energies, ae)
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np.testing.assert_array_almost_equal(scan.thetas, at)
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np.testing.assert_array_almost_equal(scan.phis, ap)
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np.testing.assert_array_almost_equal(scan.alphas, aa)
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def test_define_scan(self):
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scan = project.Scan()
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p0 = np.asarray([20])
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p1 = np.linspace(1, 4, 4)
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p2 = np.linspace(11, 13, 3)
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d = {'t': p1, 'e': p0, 'p': p2}
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scan.define_scan(d, "C", "1s")
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ae = np.asarray([20])
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at = np.asarray([1, 2, 3, 4])
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ap = np.asarray([11, 12, 13])
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aa = np.asarray([0])
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np.testing.assert_array_almost_equal(scan.energies, ae)
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np.testing.assert_array_almost_equal(scan.thetas, at)
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np.testing.assert_array_almost_equal(scan.phis, ap)
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np.testing.assert_array_almost_equal(scan.alphas, aa)
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re = np.ones(12) * 20
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rt = np.asarray([1, 1, 1, 2, 2, 2, 3, 3, 3, 4, 4, 4])
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rp = np.asarray([11, 12, 13, 11, 12, 13, 11, 12, 13, 11, 12, 13])
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ra = np.ones(12) * 0
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np.testing.assert_array_almost_equal(scan.raw_data['e'], re)
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np.testing.assert_array_almost_equal(scan.raw_data['t'], rt)
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np.testing.assert_array_almost_equal(scan.raw_data['p'], rp)
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np.testing.assert_array_almost_equal(scan.raw_data['a'], ra)
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class TestProject(unittest.TestCase):
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def setUp(self):
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# before each test method
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self.project = project.Project()
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def tearDown(self):
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# after each test method
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pass
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@classmethod
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def setup_class(cls):
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# before any methods in this class
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pass
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@classmethod
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def teardown_class(cls):
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# teardown_class() after any methods in this class
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pass
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@mock.patch('pmsco.data.load_data')
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@mock.patch('pmsco.data.save_data')
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def test_combine_domains(self, save_data_mock, load_data_mock):
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self.project.scans.append(project.Scan())
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parent_task = dispatch.CalculationTask()
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parent_task.change_id(model=0, scan=0)
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parent_task.model['wdom1'] = 0.5
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child_tasks = [parent_task.copy()] * 2
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for idx, task in enumerate(child_tasks):
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task.change_id(domain=idx)
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data1 = data.create_data(5, datatype='EI')
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data1['e'] = np.arange(5)
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data1['i'] = 10.
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data2 = data1.copy()
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data2['i'] = 10.
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load_data_mock.side_effect = [data1, data2]
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data3 = data1.copy()
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data3['i'] = (10. + 0.5 * 10.) / 1.5
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self.project.combine_domains(parent_task, child_tasks)
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save_data_mock.assert_called()
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args, kwargs = save_data_mock.call_args
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result_data = args[1]
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np.testing.assert_array_almost_equal(result_data['e'], data3['e'])
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np.testing.assert_array_almost_equal(result_data['i'], data3['i'])
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if __name__ == '__main__':
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unittest.main()
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