public distro 2.1.0

This commit is contained in:
2019-07-19 12:54:54 +02:00
parent acea809e4e
commit fbd2d4fa8c
40 changed files with 2813 additions and 345 deletions

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@ -20,14 +20,71 @@ Licensed under the Apache License, Version 2.0 (the "License"); @n
from __future__ import absolute_import
from __future__ import division
from __future__ import print_function
import unittest
import mock
import numpy as np
import os
import unittest
import pmsco.data as data
import pmsco.dispatch as dispatch
import pmsco.project as project
class TestScan(unittest.TestCase):
"""
test case for @ref pmsco.project.Scan class
"""
def test_import_scan_file(self):
base_dir = os.path.dirname(os.path.abspath(__file__))
test_file = os.path.join(base_dir, "..", "projects", "twoatom", "twoatom_energy_alpha.etpai")
scan = project.Scan()
scan.import_scan_file(test_file, "C", "1s")
mode = ['e', 'a']
self.assertEqual(scan.mode, mode)
ae = np.arange(10, 1005, 5)
at = np.asarray([0])
ap = np.asarray([0])
aa = np.arange(-90, 91, 1)
np.testing.assert_array_almost_equal(scan.energies, ae)
np.testing.assert_array_almost_equal(scan.thetas, at)
np.testing.assert_array_almost_equal(scan.phis, ap)
np.testing.assert_array_almost_equal(scan.alphas, aa)
def test_define_scan(self):
scan = project.Scan()
p0 = np.asarray([20])
p1 = np.linspace(1, 4, 4)
p2 = np.linspace(11, 13, 3)
d = {'t': p1, 'e': p0, 'p': p2}
scan.define_scan(d, "C", "1s")
ae = np.asarray([20])
at = np.asarray([1, 2, 3, 4])
ap = np.asarray([11, 12, 13])
aa = np.asarray([0])
np.testing.assert_array_almost_equal(scan.energies, ae)
np.testing.assert_array_almost_equal(scan.thetas, at)
np.testing.assert_array_almost_equal(scan.phis, ap)
np.testing.assert_array_almost_equal(scan.alphas, aa)
re = np.ones(12) * 20
rt = np.asarray([1, 1, 1, 2, 2, 2, 3, 3, 3, 4, 4, 4])
rp = np.asarray([11, 12, 13, 11, 12, 13, 11, 12, 13, 11, 12, 13])
ra = np.ones(12) * 0
np.testing.assert_array_almost_equal(scan.raw_data['e'], re)
np.testing.assert_array_almost_equal(scan.raw_data['t'], rt)
np.testing.assert_array_almost_equal(scan.raw_data['p'], rp)
np.testing.assert_array_almost_equal(scan.raw_data['a'], ra)
class TestProject(unittest.TestCase):
def setUp(self):
# before each test method