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<a href="pearl-area-import_8ipf.html">Go to the documentation of this file.</a><div class="fragment"><div class="line"><a name="l00001"></a><span class="lineno"> 1</span> <span class="preprocessor">#pragma rtGlobals=3 // Use modern global access method and strict wave access.</span></div><div class="line"><a name="l00002"></a><span class="lineno"> 2</span> <span class="preprocessor">#pragma IgorVersion = 6.2</span></div><div class="line"><a name="l00003"></a><span class="lineno"> 3</span> <span class="preprocessor">#pragma ModuleName = PearlAreaImport</span></div><div class="line"><a name="l00004"></a><span class="lineno"> 4</span> <span class="preprocessor">#include <HDF5 Browser></span></div><div class="line"><a name="l00005"></a><span class="lineno"> 5</span> <span class="preprocessor">#include "pearl-compat"</span></div><div class="line"><a name="l00006"></a><span class="lineno"> 6</span> <span class="preprocessor">#include "pearl-gui-tools"</span></div><div class="line"><a name="l00007"></a><span class="lineno"> 7</span> </div><div class="line"><a name="l00008"></a><span class="lineno"> 8</span> <span class="comment">// copyright (c) 2013-18 Paul Scherrer Institut</span></div><div class="line"><a name="l00009"></a><span class="lineno"> 9</span> <span class="comment">//</span></div><div class="line"><a name="l00010"></a><span class="lineno"> 10</span> <span class="comment">// Licensed under the Apache License, Version 2.0 (the "License");</span></div><div class="line"><a name="l00011"></a><span class="lineno"> 11</span> <span class="comment">// you may not use this file except in compliance with the License.</span></div><div class="line"><a name="l00012"></a><span class="lineno"> 12</span> <span class="comment">// You may obtain a copy of the License at</span></div><div class="line"><a name="l00013"></a><span class="lineno"> 13</span> <span class="comment">// http:///www.apache.org/licenses/LICENSE-2.0</span></div><div class="line"><a name="l00014"></a><span class="lineno"> 14</span> </div><div class="line"><a name="l00034"></a><span class="lineno"> 34</span> </div><div class="line"><a name="l00039"></a><span class="lineno"> 39</span> </div><div class="line"><a name="l00042"></a><span class="lineno"><a class="line" href="pearl-area-import_8ipf.html#ae2cfa1ac6651cfc3fb0dfce03494995b"> 42</a></span> <span class="keyword">static</span> <span class="keyword">function</span> <a class="code" href="pearl-area-import_8ipf.html#ae2cfa1ac6651cfc3fb0dfce03494995b">BeforeFileOpenHook</a>(refNum,fileName,path,type,creator,kind)</div><div class="line"><a name="l00043"></a><span class="lineno"> 43</span>  variable refNum, kind</div><div class="line"><a name="l00044"></a><span class="lineno"> 44</span>  <span class="keywordtype">string</span> fileName, path, type, creator</div><div class="line"><a name="l00045"></a><span class="lineno"> 45</span>  </div><div class="line"><a name="l00046"></a><span class="lineno"> 46</span>  variable handledOpen = 0</div><div class="line"><a name="l00047"></a><span class="lineno"> 47</span> </div><div class="line"><a name="l00048"></a><span class="lineno"> 48</span>  <span class="comment">//PathInfo $path</span></div><div class="line"><a name="l00049"></a><span class="lineno"> 49</span>  <span class="comment">//string FilePath = s_path + filename</span></div><div class="line"><a name="l00050"></a><span class="lineno"> 50</span>  <span class="keywordtype">string</span> NickName = <a class="code" href="pearl-compat_8ipf.html#aa1f59acc532c7eee75c83b70ee1feaa9">PearlCleanupName</a>(ParseFilePath(3, FileName, <span class="stringliteral">":"</span>, 0, 0))</div><div class="line"><a name="l00051"></a><span class="lineno"> 51</span>  string FileExt = LowerStr(ParseFilePath(4, FileName, ":", 0, 0))</div><div class="line"><a name="l00052"></a><span class="lineno"> 52</span>  <span class="keywordtype">string</span> result = ""</div><div class="line"><a name="l00053"></a><span class="lineno"> 53</span>  </div><div class="line"><a name="l00054"></a><span class="lineno"> 54</span>  <span class="comment">// override nickname with custom setting</span></div><div class="line"><a name="l00055"></a><span class="lineno"> 55</span>  svar /z cnn = gsCustomNickName</div><div class="line"><a name="l00056"></a><span class="lineno"> 56</span>  if (svar_exists(cnn))</div><div class="line"><a name="l00057"></a><span class="lineno"> 57</span>  if (exists("gvNickNameIndex") != 2)</div><div class="line"><a name="l00058"></a><span class="lineno"> 58</span>  variable/g gvNickNameIndex = 1</div><div class="line"><a name="l00059"></a><span class="lineno"> 59</span>  endif</div><div class="line"><a name="l00060"></a><span class="lineno"> 60</span>  nvar nni = gvNickNameIndex</div><div class="line"><a name="l00061"></a><span class="lineno"> 61</span>  NickName = cnn + num2str(nni)</div><div class="line"><a name="l00062"></a><span class="lineno"> 62</span>  nni += 1</div><div class="line"><a name="l00063"></a><span class="lineno"> 63</span>  endif</div><div class="line"><a name="l00064"></a><span class="lineno"> 64</span> </div><div class="line"><a name="l00065"></a><span class="lineno"> 65</span>  if (stringmatch(FileExt, "h5") == 1)</div><div class="line"><a name="l00066"></a><span class="lineno"> 66</span>  result = <a class="code" href="pearl-area-import_8ipf.html#ab1040bf272c69dc69777b2f91df41fab">adh5_load_complete</a>(NickName, path, FileName)</div><div class="line"><a name="l00067"></a><span class="lineno"> 67</span>  endif</div><div class="line"><a name="l00068"></a><span class="lineno"> 68</span>  </div><div class="line"><a name="l00069"></a><span class="lineno"> 69</span>  <span class="keywordtype">string</span>/g s_latest_datafile = result</div><div class="line"><a name="l00070"></a><span class="lineno"> 70</span>  <span class="keywordtype">string</span>/g s_latest_nickname = nickname</div><div class="line"><a name="l00071"></a><span class="lineno"> 71</span>  </div><div class="line"><a name="l00072"></a><span class="lineno"> 72</span>  handledOpen = strlen(result) > 0</div><div class="line"><a name="l00073"></a><span class="lineno"> 73</span>  if (handledOpen)</div><div class="line"><a name="l00074"></a><span class="lineno"> 74</span>  close refnum</div><div class="line"><a name="l00075"></a><span class="lineno"> 75</span>  endif</div><div class="line"><a name="l00076"></a><span class="lineno"> 76</span>  </div><div class="line"><a name="l00077"></a><span class="lineno"> 77</span>  return handledOpen <span class="comment">// 1 tells Igor not to open the file</span></div><div class="line"><a name="l00078"></a><span class="lineno"> 78</span> End</div><div class="line"><a name="l00079"></a><span class="lineno"> 79</span> </div><div class="line"><a name="l00106"></a><span class="lineno"><a class="line" href="pearl-area-import_8ipf.html#ad28dbbba73e553f7b5dcf8baf1c86786"> 106</a></span> function /s <a class="code" href="pearl-area-import_8ipf.html#ad28dbbba73e553f7b5dcf8baf1c86786">ad_suggest_foldername</a>(filename, [ignoredate,sourcename,unique])</div><div class="line"><a name="l00107"></a><span class="lineno"> 107</span>  <span class="keywordtype">string</span> filename</div><div class="line"><a name="l00108"></a><span class="lineno"> 108</span>  variable ignoredate</div><div class="line"><a name="l00109"></a><span class="lineno"> 109</span>  <span class="keywordtype">string</span> sourcename</div><div class="line"><a name="l00110"></a><span class="lineno"> 110</span>  variable unique</div><div class="line"><a name="l00111"></a><span class="lineno"> 111</span>  </div><div class="line"><a name="l00112"></a><span class="lineno"> 112</span>  if (ParamIsDefault(ignoredate))</div><div class="line"><a name="l00113"></a><span class="lineno"> 113</span>  ignoredate = 0</div><div class="line"><a name="l00114"></a><span class="lineno"> 114</span>  endif</div><div class="line"><a name="l00115"></a><span class="lineno"> 115</span>  if (ParamIsDefault(unique))</div><div class="line"><a name="l00116"></a><span class="lineno"> 116</span>  unique = 0</div><div class="line"><a name="l00117"></a><span class="lineno"> 117</span>  endif</div><div class="line"><a name="l00118"></a><span class="lineno"> 118</span>  </div><div class="line"><a name="l00119"></a><span class="lineno"> 119</span>  <span class="keywordtype">string</span> basename = ParseFilePath(3, filename, ":", 0, 0)</div><div class="line"><a name="l00120"></a><span class="lineno"> 120</span>  <span class="keywordtype">string</span> extension = ParseFilePath(4, filename, ":", 0, 0)</div><div class="line"><a name="l00121"></a><span class="lineno"> 121</span>  <span class="keywordtype">string</span> nickname</div><div class="line"><a name="l00122"></a><span class="lineno"> 122</span>  </div><div class="line"><a name="l00123"></a><span class="lineno"> 123</span>  <span class="keywordtype">string</span> autosource</div><div class="line"><a name="l00124"></a><span class="lineno"> 124</span>  if (strsearch(basename, "scienta", 0, 2) >= 0)</div><div class="line"><a name="l00125"></a><span class="lineno"> 125</span>  autosource = "sci"</div><div class="line"><a name="l00126"></a><span class="lineno"> 126</span>  elseif (strsearch(basename, "pshell", 0, 2) >= 0)</div><div class="line"><a name="l00127"></a><span class="lineno"> 127</span>  autosource = "psh"</div><div class="line"><a name="l00128"></a><span class="lineno"> 128</span>  elseif (strsearch(basename, "OP-SL", 0, 2) >= 0)</div><div class="line"><a name="l00129"></a><span class="lineno"> 129</span>  autosource = "sl"</div><div class="line"><a name="l00130"></a><span class="lineno"> 130</span>  elseif (strsearch(basename, "ES-PS", 0, 2) >= 0)</div><div class="line"><a name="l00131"></a><span class="lineno"> 131</span>  autosource = "es"</div><div class="line"><a name="l00132"></a><span class="lineno"> 132</span>  else</div><div class="line"><a name="l00133"></a><span class="lineno"> 133</span>  autosource = "xy"</div><div class="line"><a name="l00134"></a><span class="lineno"> 134</span>  endif</div><div class="line"><a name="l00135"></a><span class="lineno"> 135</span>  if (ParamIsDefault(sourcename))</div><div class="line"><a name="l00136"></a><span class="lineno"> 136</span>  sourcename = autosource</div><div class="line"><a name="l00137"></a><span class="lineno"> 137</span>  endif</div><div class="line"><a name="l00138"></a><span class="lineno"> 138</span>  </div><div class="line"><a name="l00139"></a><span class="lineno"> 139</span>  variable nparts = ItemsInList(basename, "-")</div><div class="line"><a name="l00140"></a><span class="lineno"> 140</span>  if (nparts >= 3)</div><div class="line"><a name="l00141"></a><span class="lineno"> 141</span>  <span class="keywordtype">string</span> datepart = StringFromList(1, basename, "-")</div><div class="line"><a name="l00142"></a><span class="lineno"> 142</span>  variable l_datepart = strlen(datepart)</div><div class="line"><a name="l00143"></a><span class="lineno"> 143</span>  if (l_datepart == 8)</div><div class="line"><a name="l00144"></a><span class="lineno"> 144</span>  datepart = datepart[l_datepart-6, l_datepart-1]</div><div class="line"><a name="l00145"></a><span class="lineno"> 145</span>  endif</div><div class="line"><a name="l00146"></a><span class="lineno"> 146</span>  <span class="keywordtype">string</span> indexpart = StringFromList(2, basename, "-")</div><div class="line"><a name="l00147"></a><span class="lineno"> 147</span>  if (ignoredate)</div><div class="line"><a name="l00148"></a><span class="lineno"> 148</span>  sprintf nickname, "%s_%s", sourcename, indexpart</div><div class="line"><a name="l00149"></a><span class="lineno"> 149</span>  else</div><div class="line"><a name="l00150"></a><span class="lineno"> 150</span>  sprintf nickname, "%s_%s_%s", sourcename, datepart, indexpart</div><div class="line"><a name="l00151"></a><span class="lineno"> 151</span>  endif</div><div class="line"><a name="l00152"></a><span class="lineno"> 152</span>  else</div><div class="line"><a name="l00153"></a><span class="lineno"> 153</span>  nickname = <a class="code" href="pearl-compat_8ipf.html#aa1f59acc532c7eee75c83b70ee1feaa9">PearlCleanupName</a>(basename)</div><div class="line"><a name="l00154"></a><span class="lineno"> 154</span>  endif</div><div class="line"><a name="l00155"></a><span class="lineno"> 155</span>  </div><div class="line"><a name="l00156"></a><span class="lineno"> 156</span>  if (unique && CheckName(nickname, 11))</div><div class="line"><a name="l00157"></a><span class="lineno"> 157</span>  nickname = UniqueName(nickname + "_", 11, 0)</div><div class="line"><a name="l00158"></a><span class="lineno"> 158</span>  endif</div><div class="line"><a name="l00159"></a><span class="lineno"> 159</span>  </div><div class="line"><a name="l00160"></a><span class="lineno"> 160</span>  return nickname</div><div class="line"><a name="l00161"></a><span class="lineno"> 161</span> end</div><div class="line"><a name="l00162"></a><span class="lineno"> 162</span> </div><div class="line"><a name="l00167"></a><span class="lineno"><a class="line" href="pearl-area-import_8ipf.html#aedff2e67d2e1bac907f2eaf24a6e5c3c"> 167</a></span> function <a class="code" href="pearl-area-import_8ipf.html#aedff2e67d2e1bac907f2eaf24a6e5c3c">ad_load_dialog</a>(APathName)</div><div class="line"><a name="l00168"></a><span class="lineno"> 168</span>  <span class="keywordtype">string</span> APathName</div><div class="line"><a name="l00169"></a><span class="lineno"> 169</span>  </div><div class="line"><a name="l00170"></a><span class="lineno"> 170</span>  variable refNum</div><div class="line"><a name="l00171"></a><span class="lineno"> 171</span>  <span class="keywordtype">string</span> message = "Select data files"</div><div class="line"><a name="l00172"></a><span class="lineno"> 172</span>  <span class="keywordtype">string</span> filepaths</div><div class="line"><a name="l00173"></a><span class="lineno"> 173</span>  <span class="keywordtype">string</span> filefilters = "Area Detector HDF5 Files (*.h5):.h5;"</div><div class="line"><a name="l00174"></a><span class="lineno"> 174</span>  filefilters += "All Files:.*;"</div><div class="line"><a name="l00175"></a><span class="lineno"> 175</span> </div><div class="line"><a name="l00176"></a><span class="lineno"> 176</span>  PathInfo /S $APathName</div><div class="line"><a name="l00177"></a><span class="lineno"> 177</span>  Open /D /R /F=filefilters /M=message /MULT=1 refNum</div><div class="line"><a name="l00178"></a><span class="lineno"> 178</span>  filepaths = S_fileName</div><div class="line"><a name="l00179"></a><span class="lineno"> 179</span> </div><div class="line"><a name="l00180"></a><span class="lineno"> 180</span>  dfref saveDF = GetDataFolderDFR()</div><div class="line"><a name="l00181"></a><span class="lineno"> 181</span>  setdatafolder root:</div><div class="line"><a name="l00182"></a><span class="lineno"> 182</span> </div><div class="line"><a name="l00183"></a><span class="lineno"> 183</span>  if (strlen(filepaths) > 0)</div><div class="line"><a name="l00184"></a><span class="lineno"> 184</span>  variable nfiles = ItemsInList(filepaths, "\r")</div><div class="line"><a name="l00185"></a><span class="lineno"> 185</span>  variable ifile</div><div class="line"><a name="l00186"></a><span class="lineno"> 186</span>  for(ifile = 0; ifile < nfiles; ifile += 1)</div><div class="line"><a name="l00187"></a><span class="lineno"> 187</span>  String path = StringFromList(ifile, filepaths, "\r")</div><div class="line"><a name="l00188"></a><span class="lineno"> 188</span>  <span class="keywordtype">string</span> nickname = <a class="code" href="pearl-area-import_8ipf.html#ad28dbbba73e553f7b5dcf8baf1c86786">ad_suggest_foldername</a>(path)</div><div class="line"><a name="l00189"></a><span class="lineno"> 189</span>  <a class="code" href="pearl-area-import_8ipf.html#ab1040bf272c69dc69777b2f91df41fab">adh5_load_complete</a>(nickname, "", path)</div><div class="line"><a name="l00190"></a><span class="lineno"> 190</span>  endfor</div><div class="line"><a name="l00191"></a><span class="lineno"> 191</span>  endif</div><div class="line"><a name="l00192"></a><span class="lineno"> 192</span> </div><div class="line"><a name="l00193"></a><span class="lineno"> 193</span>  setdatafolder saveDF</div><div class="line"><a name="l00194"></a><span class="lineno"> 194</span> end</div><div class="line"><a name="l00195"></a><span class="lineno"> 195</span> </div><div class="line"><a name="l00207"></a><span class="lineno"><a class="line" href="pearl-area-import_8ipf.html#ab1040bf272c69dc69777b2f91df41fab"> 207</a></span> function /s <a class="code" href="pearl-area-import_8ipf.html#ab1040bf272c69dc69777b2f91df41fab">adh5_load_complete</a>(ANickName, APathName, AFileName, [load_data, load_attr])</div><div class="line"><a name="l00208"></a><span class="lineno"> 208</span>  <span class="keywordtype">string</span> ANickName</div><div class="line"><a name="l00209"></a><span class="lineno"> 209</span>  <span class="keywordtype">string</span> APathName</div><div class="line"><a name="l00210"></a><span class="lineno"> 210</span>  <span class="keywordtype">string</span> AFileName</div><div class="line"><a name="l00211"></a><span class="lineno"> 211</span>  variable load_data</div><div class="line"><a name="l00212"></a><span class="lineno"> 212</span>  variable load_attr</div><div class="line"><a name="l00213"></a><span class="lineno"> 213</span>  </div><div class="line"><a name="l00214"></a><span class="lineno"> 214</span>  if (ParamIsDefault(load_data))</div><div class="line"><a name="l00215"></a><span class="lineno"> 215</span>  load_data = 1</div><div class="line"><a name="l00216"></a><span class="lineno"> 216</span>  endif</div><div class="line"><a name="l00217"></a><span class="lineno"> 217</span>  if (ParamIsDefault(load_attr))</div><div class="line"><a name="l00218"></a><span class="lineno"> 218</span>  load_attr = 1</div><div class="line"><a name="l00219"></a><span class="lineno"> 219</span>  endif</div><div class="line"><a name="l00220"></a><span class="lineno"> 220</span>  </div><div class="line"><a name="l00221"></a><span class="lineno"> 221</span>  dfref saveDF = GetDataFolderDFR()</div><div class="line"><a name="l00222"></a><span class="lineno"> 222</span>  setdatafolder root:</div><div class="line"><a name="l00223"></a><span class="lineno"> 223</span>  newdatafolder /s/o $("root:" + ANickName)</div><div class="line"><a name="l00224"></a><span class="lineno"> 224</span>  </div><div class="line"><a name="l00225"></a><span class="lineno"> 225</span>  <span class="comment">// open file</span></div><div class="line"><a name="l00226"></a><span class="lineno"> 226</span>  variable fileID</div><div class="line"><a name="l00227"></a><span class="lineno"> 227</span>  <span class="keywordtype">string</span> instrumentpath = "/entry/instrument/"</div><div class="line"><a name="l00228"></a><span class="lineno"> 228</span>  <span class="keywordtype">string</span> detectorpath = instrumentpath + "detector/"</div><div class="line"><a name="l00229"></a><span class="lineno"> 229</span>  <span class="keywordtype">string</span> attributespath = instrumentpath + "NDAttributes/"</div><div class="line"><a name="l00230"></a><span class="lineno"> 230</span>  <span class="keywordtype">string</span> datasetname</div><div class="line"><a name="l00231"></a><span class="lineno"> 231</span>  <span class="keywordtype">string</span> datawavename</div><div class="line"><a name="l00232"></a><span class="lineno"> 232</span>  </div><div class="line"><a name="l00233"></a><span class="lineno"> 233</span>  <span class="comment">// performance monitoring</span></div><div class="line"><a name="l00234"></a><span class="lineno"> 234</span>  variable timerRefNum</div><div class="line"><a name="l00235"></a><span class="lineno"> 235</span>  variable /g adh5_perf_secs</div><div class="line"><a name="l00236"></a><span class="lineno"> 236</span>  timerRefNum = startMSTimer</div><div class="line"><a name="l00237"></a><span class="lineno"> 237</span>  </div><div class="line"><a name="l00238"></a><span class="lineno"> 238</span>  <span class="comment">// avoid compilation error if HDF5 XOP has not been loaded</span></div><div class="line"><a name="l00239"></a><span class="lineno"> 239</span>  <span class="preprocessor">#if Exists("HDF5OpenFile")</span></div><div class="line"><a name="l00240"></a><span class="lineno"> 240</span>  HDF5OpenFile /P=$APathName/R fileID as AFileName</div><div class="line"><a name="l00241"></a><span class="lineno"> 241</span>  <span class="keywordflow">if</span> (v_flag == 0)</div><div class="line"><a name="l00242"></a><span class="lineno"> 242</span>  AFileName = s_path + s_filename</div><div class="line"><a name="l00243"></a><span class="lineno"> 243</span>  print <span class="stringliteral">"loading "</span> + s_filename + <span class="stringliteral">"\r"</span></div><div class="line"><a name="l00244"></a><span class="lineno"> 244</span>  </div><div class="line"><a name="l00245"></a><span class="lineno"> 245</span>  <span class="keywordflow">if</span> (load_data)</div><div class="line"><a name="l00246"></a><span class="lineno"> 246</span>  <a class="code" href="pearl-area-import_8ipf.html#a4a9741d1c19b10bb98b73bd5163a497b">adh5_load_detector_slabs</a>(fileID, detectorpath)</div><div class="line"><a name="l00247"></a><span class="lineno"> 247</span>  endif</div><div class="line"><a name="l00248"></a><span class="lineno"> 248</span>  <span class="keywordflow">if</span> (load_attr)</div><div class="line"><a name="l00249"></a><span class="lineno"> 249</span>  newdatafolder /o/s attr</div><div class="line"><a name="l00250"></a><span class="lineno"> 250</span>  <a class="code" href="pearl-area-import_8ipf.html#acde16dc7a393250b17165344f865f7b5">adh5_loadattr_all</a>(fileID, attributespath)</div><div class="line"><a name="l00251"></a><span class="lineno"> 251</span>  setdatafolder ::</div><div class="line"><a name="l00252"></a><span class="lineno"> 252</span>  endif</div><div class="line"><a name="l00253"></a><span class="lineno"> 253</span> </div><div class="line"><a name="l00254"></a><span class="lineno"> 254</span>  wave /z data</div><div class="line"><a name="l00255"></a><span class="lineno"> 255</span>  <span class="keywordflow">if</span> (waveexists(data))</div><div class="line"><a name="l00256"></a><span class="lineno"> 256</span>  <span class="comment">//adh5_redim(data) // not to be used with adh5_load_detector_slabs</span></div><div class="line"><a name="l00257"></a><span class="lineno"> 257</span>  <a class="code" href="pearl-area-import_8ipf.html#a774751d1857ea6946a942448dc913128">adh5_scale</a>(data)</div><div class="line"><a name="l00258"></a><span class="lineno"> 258</span>  endif</div><div class="line"><a name="l00259"></a><span class="lineno"> 259</span> </div><div class="line"><a name="l00260"></a><span class="lineno"> 260</span>  HDF5CloseFile fileID</div><div class="line"><a name="l00261"></a><span class="lineno"> 261</span>  <span class="keywordflow">else</span></div><div class="line"><a name="l00262"></a><span class="lineno"> 262</span>  AFileName = <span class="stringliteral">""</span></div><div class="line"><a name="l00263"></a><span class="lineno"> 263</span>  endif</div><div class="line"><a name="l00264"></a><span class="lineno"> 264</span> <span class="preprocessor"> #else</span></div><div class="line"><a name="l00265"></a><span class="lineno"> 265</span>  Abort <span class="stringliteral">"HDF5 XOP not loaded."</span></div><div class="line"><a name="l00266"></a><span class="lineno"> 266</span> <span class="preprocessor"> #endif</span></div><div class="line"><a name="l00267"></a><span class="lineno"> 267</span> </div><div class="line"><a name="l00268"></a><span class="lineno"> 268</span>  <span class="keywordflow">if</span> (timerRefNum >= 0)</div><div class="line"><a name="l00269"></a><span class="lineno"> 269</span>  adh5_perf_secs = stopMSTimer(timerRefNum) / 1e6</div><div class="line"><a name="l00270"></a><span class="lineno"> 270</span>  endif</div><div class="line"><a name="l00271"></a><span class="lineno"> 271</span>  </div><div class="line"><a name="l00272"></a><span class="lineno"> 272</span>  setdatafolder saveDF</div><div class="line"><a name="l00273"></a><span class="lineno"> 273</span>  <span class="keywordflow">return</span> AFileName</div><div class="line"><a name="l00274"></a><span class="lineno"> 274</span> end</div><div class="line"><a name="l00275"></a><span class="lineno"> 275</span> </div><div class="line"><a name="l00302"></a><span class="lineno"><a class="line" href="pearl-area-import_8ipf.html#a98f9339cd2fae80d0d92451df88395aa"> 302</a></span> <span class="keyword">function</span> /s <a class="code" href="pearl-area-import_8ipf.html#a98f9339cd2fae80d0d92451df88395aa">adh5_load_reduced</a>(ANickName, APathName, AFileName, reduction_func, reduction_param, [load_data, load_attr, progress])</div><div class="line"><a name="l00303"></a><span class="lineno"> 303</span>  <span class="keywordtype">string</span> ANickName</div><div class="line"><a name="l00304"></a><span class="lineno"> 304</span>  <span class="keywordtype">string</span> APathName</div><div class="line"><a name="l00305"></a><span class="lineno"> 305</span>  <span class="keywordtype">string</span> AFileName</div><div class="line"><a name="l00306"></a><span class="lineno"> 306</span> </div><div class="line"><a name="l00307"></a><span class="lineno"> 307</span>  funcref <a class="code" href="pearl-area-import_8ipf.html#ade69cb0f82e0c9cf6082d5fcc29f742f">adh5_default_reduction</a> reduction_func</div><div class="line"><a name="l00308"></a><span class="lineno"> 308</span>  <span class="keywordtype">string</span> reduction_param</div><div class="line"><a name="l00309"></a><span class="lineno"> 309</span> </div><div class="line"><a name="l00310"></a><span class="lineno"> 310</span>  variable load_data</div><div class="line"><a name="l00311"></a><span class="lineno"> 311</span>  variable load_attr</div><div class="line"><a name="l00312"></a><span class="lineno"> 312</span>  variable progress</div><div class="line"><a name="l00313"></a><span class="lineno"> 313</span>  </div><div class="line"><a name="l00314"></a><span class="lineno"> 314</span>  <span class="keywordflow">if</span> (ParamIsDefault(load_data))</div><div class="line"><a name="l00315"></a><span class="lineno"> 315</span>  load_data = 1</div><div class="line"><a name="l00316"></a><span class="lineno"> 316</span>  endif</div><div class="line"><a name="l00317"></a><span class="lineno"> 317</span>  <span class="keywordflow">if</span> (ParamIsDefault(load_attr))</div><div class="line"><a name="l00318"></a><span class="lineno"> 318</span>  load_attr = 1</div><div class="line"><a name="l00319"></a><span class="lineno"> 319</span>  endif</div><div class="line"><a name="l00320"></a><span class="lineno"> 320</span>  <span class="keywordflow">if</span> (ParamIsDefault(progress))</div><div class="line"><a name="l00321"></a><span class="lineno"> 321</span>  progress = 1</div><div class="line"><a name="l00322"></a><span class="lineno"> 322</span>  endif</div><div class="line"><a name="l00323"></a><span class="lineno"> 323</span>  </div><div class="line"><a name="l00324"></a><span class="lineno"> 324</span>  dfref saveDF = GetDataFolderDFR()</div><div class="line"><a name="l00325"></a><span class="lineno"> 325</span>  setdatafolder root:</div><div class="line"><a name="l00326"></a><span class="lineno"> 326</span>  newdatafolder /s/o $("root:" + ANickName)</div><div class="line"><a name="l00327"></a><span class="lineno"> 327</span>  </div><div class="line"><a name="l00328"></a><span class="lineno"> 328</span>  <span class="comment">// open file</span></div><div class="line"><a name="l00329"></a><span class="lineno"> 329</span>  variable fileID</div><div class="line"><a name="l00330"></a><span class="lineno"> 330</span>  <span class="keywordtype">string</span> instrumentpath = "/entry/instrument/"</div><div class="line"><a name="l00331"></a><span class="lineno"> 331</span>  <span class="keywordtype">string</span> detectorpath = instrumentpath + "detector/"</div><div class="line"><a name="l00332"></a><span class="lineno"> 332</span>  <span class="keywordtype">string</span> attributespath = instrumentpath + "NDAttributes/"</div><div class="line"><a name="l00333"></a><span class="lineno"> 333</span>  <span class="keywordtype">string</span> datasetname</div><div class="line"><a name="l00334"></a><span class="lineno"> 334</span>  <span class="keywordtype">string</span> datawavename</div><div class="line"><a name="l00335"></a><span class="lineno"> 335</span>  </div><div class="line"><a name="l00336"></a><span class="lineno"> 336</span>  <span class="comment">// performance monitoring</span></div><div class="line"><a name="l00337"></a><span class="lineno"> 337</span>  variable timerRefNum</div><div class="line"><a name="l00338"></a><span class="lineno"> 338</span>  variable /g adh5_perf_secs</div><div class="line"><a name="l00339"></a><span class="lineno"> 339</span>  timerRefNum = startMSTimer</div><div class="line"><a name="l00340"></a><span class="lineno"> 340</span>  </div><div class="line"><a name="l00341"></a><span class="lineno"> 341</span>  <span class="comment">// avoid compilation error if HDF5 XOP has not been loaded</span></div><div class="line"><a name="l00342"></a><span class="lineno"> 342</span>  <span class="preprocessor">#if Exists("HDF5OpenFile")</span></div><div class="line"><a name="l00343"></a><span class="lineno"> 343</span>  HDF5OpenFile /P=$APathName/R fileID as AFileName</div><div class="line"><a name="l00344"></a><span class="lineno"> 344</span>  <span class="keywordflow">if</span> (v_flag == 0)</div><div class="line"><a name="l00345"></a><span class="lineno"> 345</span>  AFileName = s_path + s_filename</div><div class="line"><a name="l00346"></a><span class="lineno"> 346</span>  print <span class="stringliteral">"loading "</span> + s_filename + <span class="stringliteral">"\r"</span></div><div class="line"><a name="l00347"></a><span class="lineno"> 347</span>  </div><div class="line"><a name="l00348"></a><span class="lineno"> 348</span>  <span class="keywordflow">if</span> (load_attr)</div><div class="line"><a name="l00349"></a><span class="lineno"> 349</span>  newdatafolder /o/s attr</div><div class="line"><a name="l00350"></a><span class="lineno"> 350</span>  <a class="code" href="pearl-area-import_8ipf.html#acde16dc7a393250b17165344f865f7b5">adh5_loadattr_all</a>(fileID, attributespath)</div><div class="line"><a name="l00351"></a><span class="lineno"> 351</span>  setdatafolder ::</div><div class="line"><a name="l00352"></a><span class="lineno"> 352</span>  endif</div><div class="line"><a name="l00353"></a><span class="lineno"> 353</span>  <span class="keywordflow">if</span> (load_data)</div><div class="line"><a name="l00354"></a><span class="lineno"> 354</span>  <a class="code" href="pearl-area-import_8ipf.html#a3f2ac36f961941e46e80a775de8300e5">adh5_load_reduced_detector</a>(fileID, detectorpath, reduction_func, reduction_param, progress=progress)</div><div class="line"><a name="l00355"></a><span class="lineno"> 355</span>  endif</div><div class="line"><a name="l00356"></a><span class="lineno"> 356</span> </div><div class="line"><a name="l00357"></a><span class="lineno"> 357</span>  HDF5CloseFile fileID</div><div class="line"><a name="l00358"></a><span class="lineno"> 358</span>  <span class="keywordflow">else</span></div><div class="line"><a name="l00359"></a><span class="lineno"> 359</span>  AFileName = <span class="stringliteral">""</span></div><div class="line"><a name="l00360"></a><span class="lineno"> 360</span>  endif</div><div class="line"><a name="l00361"></a><span class="lineno"> 361</span> <span class="preprocessor"> #else</span></div><div class="line"><a name="l00362"></a><span class="lineno"> 362</span>  Abort <span class="stringliteral">"HDF5 XOP not loaded."</span></div><div class="line"><a name="l00363"></a><span class="lineno"> 363</span> <span class="preprocessor"> #endif</span></div><div class="line"><a name="l00364"></a><span class="lineno"> 364</span> </div><div class="line"><a name="l00365"></a><span class="lineno"> 365</span>  <span class="keywordflow">if</span> (timerRefNum >= 0)</div><div class="line"><a name="l00366"></a><span class="lineno"> 366</span>  adh5_perf_secs = stopMSTimer(timerRefNum) / 1e6</div><div class="line"><a name="l00367"></a><span class="lineno"> 367</span>  endif</div><div class="line"><a name="l00368"></a><span class="lineno"> 368</span>  </div><div class="line"><a name="l00369"></a><span class="lineno"> 369</span>  setdatafolder saveDF</div><div class="line"><a name="l00370"></a><span class="lineno"> 370</span>  <span class="keywordflow">return</span> AFileName</div><div class="line"><a name="l00371"></a><span class="lineno"> 371</span> end</div><div class="line"><a name="l00372"></a><span class="lineno"> 372</span> </div><div class="line"><a name="l00387"></a><span class="lineno"><a class="line" href="pearl-area-import_8ipf.html#a98f29671bdce6a5981e8865de8b9d483"> 387</a></span> <span class="keyword">function</span> /s <a class="code" href="pearl-area-import_8ipf.html#a98f29671bdce6a5981e8865de8b9d483">adh5_load_preview</a>(ANickName, APathName, AFileName, [load_data, load_attr])</div><div class="line"><a name="l00388"></a><span class="lineno"> 388</span>  <span class="keywordtype">string</span> ANickName</div><div class="line"><a name="l00389"></a><span class="lineno"> 389</span>  <span class="keywordtype">string</span> APathName</div><div class="line"><a name="l00390"></a><span class="lineno"> 390</span>  <span class="keywordtype">string</span> AFileName</div><div class="line"><a name="l00391"></a><span class="lineno"> 391</span>  variable load_data</div><div class="line"><a name="l00392"></a><span class="lineno"> 392</span>  variable load_attr</div><div class="line"><a name="l00393"></a><span class="lineno"> 393</span>  </div><div class="line"><a name="l00394"></a><span class="lineno"> 394</span>  <span class="keywordflow">if</span> (ParamIsDefault(load_data))</div><div class="line"><a name="l00395"></a><span class="lineno"> 395</span>  load_data = 1</div><div class="line"><a name="l00396"></a><span class="lineno"> 396</span>  endif</div><div class="line"><a name="l00397"></a><span class="lineno"> 397</span>  <span class="keywordflow">if</span> (ParamIsDefault(load_attr))</div><div class="line"><a name="l00398"></a><span class="lineno"> 398</span>  load_attr = 1</div><div class="line"><a name="l00399"></a><span class="lineno"> 399</span>  endif</div><div class="line"><a name="l00400"></a><span class="lineno"> 400</span> </div><div class="line"><a name="l00401"></a><span class="lineno"> 401</span>  dfref saveDF = GetDataFolderDFR()</div><div class="line"><a name="l00402"></a><span class="lineno"> 402</span>  setdatafolder root:</div><div class="line"><a name="l00403"></a><span class="lineno"> 403</span>  newdatafolder /o/s pearl_area</div><div class="line"><a name="l00404"></a><span class="lineno"> 404</span>  newdatafolder /o/s preview</div><div class="line"><a name="l00405"></a><span class="lineno"> 405</span> </div><div class="line"><a name="l00406"></a><span class="lineno"> 406</span>  <span class="comment">// open file</span></div><div class="line"><a name="l00407"></a><span class="lineno"> 407</span>  variable fileID</div><div class="line"><a name="l00408"></a><span class="lineno"> 408</span>  <span class="keywordtype">string</span> instrumentpath = "/entry/instrument/"</div><div class="line"><a name="l00409"></a><span class="lineno"> 409</span>  <span class="keywordtype">string</span> detectorpath = instrumentpath + "detector/"</div><div class="line"><a name="l00410"></a><span class="lineno"> 410</span>  <span class="keywordtype">string</span> attributespath = instrumentpath + "NDAttributes/"</div><div class="line"><a name="l00411"></a><span class="lineno"> 411</span>  <span class="keywordtype">string</span> datasetname</div><div class="line"><a name="l00412"></a><span class="lineno"> 412</span>  <span class="keywordtype">string</span> datawavename</div><div class="line"><a name="l00413"></a><span class="lineno"> 413</span>  </div><div class="line"><a name="l00414"></a><span class="lineno"> 414</span>  <span class="comment">// performance monitoring</span></div><div class="line"><a name="l00415"></a><span class="lineno"> 415</span>  variable timerRefNum</div><div class="line"><a name="l00416"></a><span class="lineno"> 416</span>  variable /g adh5_perf_secs</div><div class="line"><a name="l00417"></a><span class="lineno"> 417</span>  timerRefNum = startMSTimer</div><div class="line"><a name="l00418"></a><span class="lineno"> 418</span>  </div><div class="line"><a name="l00419"></a><span class="lineno"> 419</span>  <span class="comment">// avoid compilation error if HDF5 XOP has not been loaded</span></div><div class="line"><a name="l00420"></a><span class="lineno"> 420</span>  <span class="preprocessor">#if Exists("HDF5OpenFile")</span></div><div class="line"><a name="l00421"></a><span class="lineno"> 421</span>  HDF5OpenFile /P=$APathName/R/Z fileID as AFileName</div><div class="line"><a name="l00422"></a><span class="lineno"> 422</span>  <span class="keywordflow">if</span> (v_flag == 0)</div><div class="line"><a name="l00423"></a><span class="lineno"> 423</span>  AFileName = s_path + s_filename</div><div class="line"><a name="l00424"></a><span class="lineno"> 424</span>  </div><div class="line"><a name="l00425"></a><span class="lineno"> 425</span>  <span class="comment">// detector data</span></div><div class="line"><a name="l00426"></a><span class="lineno"> 426</span>  datasetname = detectorpath + <span class="stringliteral">"data"</span></div><div class="line"><a name="l00427"></a><span class="lineno"> 427</span>  STRUCT HDF5DataInfo di <span class="comment">// Defined in HDF5 Browser.ipf.</span></div><div class="line"><a name="l00428"></a><span class="lineno"> 428</span>  InitHDF5DataInfo(di)</div><div class="line"><a name="l00429"></a><span class="lineno"> 429</span>  variable err = HDF5DatasetInfo(fileID, datasetname, 0, di)</div><div class="line"><a name="l00430"></a><span class="lineno"> 430</span>  <span class="keywordflow">if</span> (err != 0)</div><div class="line"><a name="l00431"></a><span class="lineno"> 431</span>  print <span class="stringliteral">"error accessing detector/data"</span></div><div class="line"><a name="l00432"></a><span class="lineno"> 432</span>  <span class="keywordflow">return</span> <span class="stringliteral">""</span></div><div class="line"><a name="l00433"></a><span class="lineno"> 433</span>  endif</div><div class="line"><a name="l00434"></a><span class="lineno"> 434</span>  <span class="keywordflow">if</span> (di.ndims < 2)</div><div class="line"><a name="l00435"></a><span class="lineno"> 435</span>  print <span class="stringliteral">"error: rank of dataset < 2"</span></div><div class="line"><a name="l00436"></a><span class="lineno"> 436</span>  <span class="keywordflow">return</span> <span class="stringliteral">""</span></div><div class="line"><a name="l00437"></a><span class="lineno"> 437</span>  endif</div><div class="line"><a name="l00438"></a><span class="lineno"> 438</span> </div><div class="line"><a name="l00439"></a><span class="lineno"> 439</span>  variable dim2start = 0, dim2count = 1, dim3start = 0, dim3count = 1</div><div class="line"><a name="l00440"></a><span class="lineno"> 440</span>  <span class="keywordflow">if</span> (di.ndims >= 3)</div><div class="line"><a name="l00441"></a><span class="lineno"> 441</span>  dim2start = floor(di.dims[di.ndims - 3] / 2)</div><div class="line"><a name="l00442"></a><span class="lineno"> 442</span>  dim2count = 1</div><div class="line"><a name="l00443"></a><span class="lineno"> 443</span>  endif</div><div class="line"><a name="l00444"></a><span class="lineno"> 444</span>  if (di.ndims >= 4)</div><div class="line"><a name="l00445"></a><span class="lineno"> 445</span>  dim3start = floor(di.dims[di.ndims - 4] / 2)</div><div class="line"><a name="l00446"></a><span class="lineno"> 446</span>  dim3count = 1</div><div class="line"><a name="l00447"></a><span class="lineno"> 447</span>  endif</div><div class="line"><a name="l00448"></a><span class="lineno"> 448</span>  </div><div class="line"><a name="l00449"></a><span class="lineno"> 449</span>  if (load_data)</div><div class="line"><a name="l00450"></a><span class="lineno"> 450</span>  <a class="code" href="pearl-area-import_8ipf.html#a931a7bfaaf75d308a0ce3c74ffc751bc">adh5_load_detector_image</a>(fileID, detectorpath, dim2start, dim2count, dim3start, dim3count)</div><div class="line"><a name="l00451"></a><span class="lineno"> 451</span>  wave /z data</div><div class="line"><a name="l00452"></a><span class="lineno"> 452</span>  <span class="keywordtype">string</span> destpath = GetDataFolder(1, saveDF) + ANickName</div><div class="line"><a name="l00453"></a><span class="lineno"> 453</span>  if (waveexists(data))</div><div class="line"><a name="l00454"></a><span class="lineno"> 454</span>  duplicate /o data, $destpath</div><div class="line"><a name="l00455"></a><span class="lineno"> 455</span>  wave /z data = $destpath</div><div class="line"><a name="l00456"></a><span class="lineno"> 456</span>  endif</div><div class="line"><a name="l00457"></a><span class="lineno"> 457</span>  endif</div><div class="line"><a name="l00458"></a><span class="lineno"> 458</span>  </div><div class="line"><a name="l00459"></a><span class="lineno"> 459</span>  if (load_attr)</div><div class="line"><a name="l00460"></a><span class="lineno"> 460</span>  setdatafolder saveDF</div><div class="line"><a name="l00461"></a><span class="lineno"> 461</span>  newdatafolder /o/s attr</div><div class="line"><a name="l00462"></a><span class="lineno"> 462</span>  killwaves /a/z</div><div class="line"><a name="l00463"></a><span class="lineno"> 463</span>  <a class="code" href="pearl-area-import_8ipf.html#acde16dc7a393250b17165344f865f7b5">adh5_loadattr_all</a>(fileID, attributespath)</div><div class="line"><a name="l00464"></a><span class="lineno"> 464</span>  setdatafolder ::</div><div class="line"><a name="l00465"></a><span class="lineno"> 465</span>  if (waveexists(data))</div><div class="line"><a name="l00466"></a><span class="lineno"> 466</span>  <a class="code" href="pearl-area-import_8ipf.html#a774751d1857ea6946a942448dc913128">adh5_scale</a>(data)</div><div class="line"><a name="l00467"></a><span class="lineno"> 467</span>  endif</div><div class="line"><a name="l00468"></a><span class="lineno"> 468</span>  endif</div><div class="line"><a name="l00469"></a><span class="lineno"> 469</span> </div><div class="line"><a name="l00470"></a><span class="lineno"> 470</span>  HDF5CloseFile fileID</div><div class="line"><a name="l00471"></a><span class="lineno"> 471</span>  else</div><div class="line"><a name="l00472"></a><span class="lineno"> 472</span>  print "error opening file " + AFileName</div><div class="line"><a name="l00473"></a><span class="lineno"> 473</span>  AFileName = ""</div><div class="line"><a name="l00474"></a><span class="lineno"> 474</span>  endif</div><div class="line"><a name="l00475"></a><span class="lineno"> 475</span>  <span class="preprocessor">#else</span></div><div class="line"><a name="l00476"></a><span class="lineno"> 476</span>  Abort <span class="stringliteral">"HDF5 XOP not loaded."</span></div><div class="line"><a name="l00477"></a><span class="lineno"> 477</span> <span class="preprocessor"> #endif</span></div><div class="line"><a name="l00478"></a><span class="lineno"> 478</span> </div><div class="line"><a name="l00479"></a><span class="lineno"> 479</span>  <span class="keywordflow">if</span> (timerRefNum >= 0)</div><div class="line"><a name="l00480"></a><span class="lineno"> 480</span>  adh5_perf_secs = stopMSTimer(timerRefNum) / 1e6</div><div class="line"><a name="l00481"></a><span class="lineno"> 481</span>  endif</div><div class="line"><a name="l00482"></a><span class="lineno"> 482</span>  </div><div class="line"><a name="l00483"></a><span class="lineno"> 483</span>  setdatafolder saveDF</div><div class="line"><a name="l00484"></a><span class="lineno"> 484</span>  <span class="keywordflow">return</span> AFileName</div><div class="line"><a name="l00485"></a><span class="lineno"> 485</span> end</div><div class="line"><a name="l00486"></a><span class="lineno"> 486</span> </div><div class="line"><a name="l00497"></a><span class="lineno"><a class="line" href="pearl-area-import_8ipf.html#ac76d5ba94a3d7c864437420d80c77064"> 497</a></span> <span class="keyword">function</span> /s <a class="code" href="pearl-area-import_8ipf.html#ac76d5ba94a3d7c864437420d80c77064">adh5_load_info</a>(APathName, AFileName)</div><div class="line"><a name="l00498"></a><span class="lineno"> 498</span>  <span class="keywordtype">string</span> APathName</div><div class="line"><a name="l00499"></a><span class="lineno"> 499</span>  <span class="keywordtype">string</span> AFileName</div><div class="line"><a name="l00500"></a><span class="lineno"> 500</span>  </div><div class="line"><a name="l00501"></a><span class="lineno"> 501</span>  dfref saveDF = GetDataFolderDFR()</div><div class="line"><a name="l00502"></a><span class="lineno"> 502</span> </div><div class="line"><a name="l00503"></a><span class="lineno"> 503</span>  <span class="comment">// open file</span></div><div class="line"><a name="l00504"></a><span class="lineno"> 504</span>  variable fileID</div><div class="line"><a name="l00505"></a><span class="lineno"> 505</span>  <span class="keywordtype">string</span> instrumentpath = "/entry/instrument/"</div><div class="line"><a name="l00506"></a><span class="lineno"> 506</span>  <span class="keywordtype">string</span> detectorpath = instrumentpath + "detector/"</div><div class="line"><a name="l00507"></a><span class="lineno"> 507</span>  <span class="keywordtype">string</span> attributespath = instrumentpath + "NDAttributes/"</div><div class="line"><a name="l00508"></a><span class="lineno"> 508</span>  <span class="keywordtype">string</span> datasetname</div><div class="line"><a name="l00509"></a><span class="lineno"> 509</span>  <span class="keywordtype">string</span> datawavename</div><div class="line"><a name="l00510"></a><span class="lineno"> 510</span>  </div><div class="line"><a name="l00511"></a><span class="lineno"> 511</span>  <span class="keywordtype">string</span> s_info = ""</div><div class="line"><a name="l00512"></a><span class="lineno"> 512</span>  <span class="keywordtype">string</span> s</div><div class="line"><a name="l00513"></a><span class="lineno"> 513</span>  </div><div class="line"><a name="l00514"></a><span class="lineno"> 514</span>  variable idim</div><div class="line"><a name="l00515"></a><span class="lineno"> 515</span>  </div><div class="line"><a name="l00516"></a><span class="lineno"> 516</span>  <span class="comment">// avoid compilation error if HDF5 XOP has not been loaded</span></div><div class="line"><a name="l00517"></a><span class="lineno"> 517</span>  <span class="preprocessor">#if Exists("HDF5OpenFile")</span></div><div class="line"><a name="l00518"></a><span class="lineno"> 518</span>  HDF5OpenFile /P=$APathName/R/Z fileID as AFileName</div><div class="line"><a name="l00519"></a><span class="lineno"> 519</span>  <span class="keywordflow">if</span> (v_flag == 0)</div><div class="line"><a name="l00520"></a><span class="lineno"> 520</span>  AFileName = s_path + s_filename</div><div class="line"><a name="l00521"></a><span class="lineno"> 521</span>  </div><div class="line"><a name="l00522"></a><span class="lineno"> 522</span>  <span class="comment">// detector data</span></div><div class="line"><a name="l00523"></a><span class="lineno"> 523</span>  datasetname = detectorpath + <span class="stringliteral">"data"</span></div><div class="line"><a name="l00524"></a><span class="lineno"> 524</span>  STRUCT HDF5DataInfo di <span class="comment">// Defined in HDF5 Browser.ipf.</span></div><div class="line"><a name="l00525"></a><span class="lineno"> 525</span>  InitHDF5DataInfo(di)</div><div class="line"><a name="l00526"></a><span class="lineno"> 526</span>  variable err = HDF5DatasetInfo(fileID, datasetname, 0, di)</div><div class="line"><a name="l00527"></a><span class="lineno"> 527</span>  <span class="keywordflow">if</span> (err != 0)</div><div class="line"><a name="l00528"></a><span class="lineno"> 528</span>  print <span class="stringliteral">"error accessing detector/data"</span></div><div class="line"><a name="l00529"></a><span class="lineno"> 529</span>  <span class="keywordflow">return</span> <span class="stringliteral">""</span></div><div class="line"><a name="l00530"></a><span class="lineno"> 530</span>  endif</div><div class="line"><a name="l00531"></a><span class="lineno"> 531</span> </div><div class="line"><a name="l00532"></a><span class="lineno"> 532</span>  <span class="keywordflow">for</span> (idim = 0; idim < di.ndims; idim += 1)</div><div class="line"><a name="l00533"></a><span class="lineno"> 533</span>  sprintf s, <span class="stringliteral">"dim %u: %u points"</span>, idim, di.dims[idim]</div><div class="line"><a name="l00534"></a><span class="lineno"> 534</span>  if (strlen(s_info) > 0)</div><div class="line"><a name="l00535"></a><span class="lineno"> 535</span>  s_info = s_info + <span class="stringliteral">"\r"</span> + s</div><div class="line"><a name="l00536"></a><span class="lineno"> 536</span>  <span class="keywordflow">else</span></div><div class="line"><a name="l00537"></a><span class="lineno"> 537</span>  s_info = s</div><div class="line"><a name="l00538"></a><span class="lineno"> 538</span>  endif</div><div class="line"><a name="l00539"></a><span class="lineno"> 539</span>  endfor</div><div class="line"><a name="l00540"></a><span class="lineno"> 540</span>  </div><div class="line"><a name="l00541"></a><span class="lineno"> 541</span>  dfref df = NewFreeDataFolder()</div><div class="line"><a name="l00542"></a><span class="lineno"> 542</span>  setdatafolder df</div><div class="line"><a name="l00543"></a><span class="lineno"> 543</span>  <a class="code" href="pearl-area-import_8ipf.html#acde16dc7a393250b17165344f865f7b5">adh5_loadattr_all</a>(fileID, attributespath)</div><div class="line"><a name="l00544"></a><span class="lineno"> 544</span> </div><div class="line"><a name="l00545"></a><span class="lineno"> 545</span>  for (idim = 1; idim < 5; idim += 1)</div><div class="line"><a name="l00546"></a><span class="lineno"> 546</span>  sprintf s, "Scan%uActive", idim</div><div class="line"><a name="l00547"></a><span class="lineno"> 547</span>  wave /z w = $s</div><div class="line"><a name="l00548"></a><span class="lineno"> 548</span>  if (waveexists(w) && (numpnts(w) > 0) && (w[0] > 0))</div><div class="line"><a name="l00549"></a><span class="lineno"> 549</span>  sprintf s, "Scan%uPositioner1", idim</div><div class="line"><a name="l00550"></a><span class="lineno"> 550</span>  wave /t wt = $s</div><div class="line"><a name="l00551"></a><span class="lineno"> 551</span>  sprintf s, "scan %u: %s", idim, wt[0]</div><div class="line"><a name="l00552"></a><span class="lineno"> 552</span>  if (strlen(s_info) > 0)</div><div class="line"><a name="l00553"></a><span class="lineno"> 553</span>  s_info = s_info + "\r" + s</div><div class="line"><a name="l00554"></a><span class="lineno"> 554</span>  else</div><div class="line"><a name="l00555"></a><span class="lineno"> 555</span>  s_info = s</div><div class="line"><a name="l00556"></a><span class="lineno"> 556</span>  endif</div><div class="line"><a name="l00557"></a><span class="lineno"> 557</span>  endif</div><div class="line"><a name="l00558"></a><span class="lineno"> 558</span>  endfor</div><div class="line"><a name="l00559"></a><span class="lineno"> 559</span>  </div><div class="line"><a name="l00560"></a><span class="lineno"> 560</span>  HDF5CloseFile fileID</div><div class="line"><a name="l00561"></a><span class="lineno"> 561</span>  else</div><div class="line"><a name="l00562"></a><span class="lineno"> 562</span>  print "error opening file " + AFileName</div><div class="line"><a name="l00563"></a><span class="lineno"> 563</span>  AFileName = ""</div><div class="line"><a name="l00564"></a><span class="lineno"> 564</span>  endif</div><div class="line"><a name="l00565"></a><span class="lineno"> 565</span>  <span class="preprocessor">#else</span></div><div class="line"><a name="l00566"></a><span class="lineno"> 566</span>  Abort <span class="stringliteral">"HDF5 XOP not loaded."</span></div><div class="line"><a name="l00567"></a><span class="lineno"> 567</span> <span class="preprocessor"> #endif</span></div><div class="line"><a name="l00568"></a><span class="lineno"> 568</span> </div><div class="line"><a name="l00569"></a><span class="lineno"> 569</span>  setdatafolder saveDF</div><div class="line"><a name="l00570"></a><span class="lineno"> 570</span>  <span class="keywordflow">return</span> s_info</div><div class="line"><a name="l00571"></a><span class="lineno"> 571</span> end</div><div class="line"><a name="l00572"></a><span class="lineno"> 572</span> </div><div class="line"><a name="l00581"></a><span class="lineno"><a class="line" href="pearl-area-import_8ipf.html#a84dc7f466b42dde5d96c49827b2122cf"> 581</a></span> <span class="keyword">function</span> <a class="code" href="pearl-area-import_8ipf.html#a84dc7f466b42dde5d96c49827b2122cf">adh5_load_detector</a>(fileID, detectorpath)</div><div class="line"><a name="l00582"></a><span class="lineno"> 582</span>  variable fileID</div><div class="line"><a name="l00583"></a><span class="lineno"> 583</span>  <span class="keywordtype">string</span> detectorpath</div><div class="line"><a name="l00584"></a><span class="lineno"> 584</span> </div><div class="line"><a name="l00585"></a><span class="lineno"> 585</span>  <span class="comment">// avoid compilation error if HDF5 XOP has not been loaded</span></div><div class="line"><a name="l00586"></a><span class="lineno"> 586</span> <span class="preprocessor"> #if Exists("HDF5LoadData")</span></div><div class="line"><a name="l00587"></a><span class="lineno"> 587</span>  <span class="keywordtype">string</span> datasetname</div><div class="line"><a name="l00588"></a><span class="lineno"> 588</span>  <span class="keywordtype">string</span> datawavename</div><div class="line"><a name="l00589"></a><span class="lineno"> 589</span> </div><div class="line"><a name="l00590"></a><span class="lineno"> 590</span>  <span class="comment">// detector data</span></div><div class="line"><a name="l00591"></a><span class="lineno"> 591</span>  datasetname = detectorpath + <span class="stringliteral">"data"</span></div><div class="line"><a name="l00592"></a><span class="lineno"> 592</span>  STRUCT HDF5DataInfo di <span class="comment">// Defined in HDF5 Browser.ipf.</span></div><div class="line"><a name="l00593"></a><span class="lineno"> 593</span>  InitHDF5DataInfo(di)</div><div class="line"><a name="l00594"></a><span class="lineno"> 594</span>  variable err = HDF5DatasetInfo(fileID, datasetname, 0, di)</div><div class="line"><a name="l00595"></a><span class="lineno"> 595</span>  <span class="keywordflow">if</span> (err != 0)</div><div class="line"><a name="l00596"></a><span class="lineno"> 596</span>  print <span class="stringliteral">"error accessing detector/data"</span></div><div class="line"><a name="l00597"></a><span class="lineno"> 597</span>  <span class="keywordflow">return</span> -1</div><div class="line"><a name="l00598"></a><span class="lineno"> 598</span>  endif</div><div class="line"><a name="l00599"></a><span class="lineno"> 599</span>  <span class="keywordflow">if</span> (di.ndims < 2)</div><div class="line"><a name="l00600"></a><span class="lineno"> 600</span>  print <span class="stringliteral">"error: rank of dataset < 2"</span></div><div class="line"><a name="l00601"></a><span class="lineno"> 601</span>  <span class="keywordflow">return</span> -2</div><div class="line"><a name="l00602"></a><span class="lineno"> 602</span>  endif</div><div class="line"><a name="l00603"></a><span class="lineno"> 603</span>  </div><div class="line"><a name="l00604"></a><span class="lineno"> 604</span>  HDF5LoadData /O /Q /Z fileID, datasetname</div><div class="line"><a name="l00605"></a><span class="lineno"> 605</span>  wave data</div><div class="line"><a name="l00606"></a><span class="lineno"> 606</span>  </div><div class="line"><a name="l00607"></a><span class="lineno"> 607</span> <span class="preprocessor"> #else</span></div><div class="line"><a name="l00608"></a><span class="lineno"> 608</span>  Abort <span class="stringliteral">"HDF5 XOP not loaded."</span></div><div class="line"><a name="l00609"></a><span class="lineno"> 609</span> <span class="preprocessor"> #endif</span></div><div class="line"><a name="l00610"></a><span class="lineno"> 610</span> end</div><div class="line"><a name="l00611"></a><span class="lineno"> 611</span> </div><div class="line"><a name="l00626"></a><span class="lineno"><a class="line" href="pearl-area-import_8ipf.html#acfa6d2675e63f4f686289ef853b262a9"> 626</a></span> <span class="keyword">function</span> <a class="code" href="pearl-area-import_8ipf.html#acfa6d2675e63f4f686289ef853b262a9">adh5_redim</a>(data)</div><div class="line"><a name="l00627"></a><span class="lineno"> 627</span>  wave data</div><div class="line"><a name="l00628"></a><span class="lineno"> 628</span>  </div><div class="line"><a name="l00629"></a><span class="lineno"> 629</span>  duplicate /free data, tempdata</div><div class="line"><a name="l00630"></a><span class="lineno"> 630</span>  variable nd = wavedims(tempdata)</div><div class="line"><a name="l00631"></a><span class="lineno"> 631</span>  variable nx = dimsize(tempdata, nd - 1)</div><div class="line"><a name="l00632"></a><span class="lineno"> 632</span>  variable ny = dimsize(tempdata, nd - 2)</div><div class="line"><a name="l00633"></a><span class="lineno"> 633</span>  variable nz = dimsize(tempdata, nd - 3)</div><div class="line"><a name="l00634"></a><span class="lineno"> 634</span>  variable nt = dimsize(tempdata, nd - 4)</div><div class="line"><a name="l00635"></a><span class="lineno"> 635</span> </div><div class="line"><a name="l00636"></a><span class="lineno"> 636</span>  switch (nd)</div><div class="line"><a name="l00637"></a><span class="lineno"> 637</span>  case 2:</div><div class="line"><a name="l00638"></a><span class="lineno"> 638</span>  if (nx <= 1)</div><div class="line"><a name="l00639"></a><span class="lineno"> 639</span>  redimension /n=(ny) data</div><div class="line"><a name="l00640"></a><span class="lineno"> 640</span>  setdimlabel 0, -1, AD_Dim1, data</div><div class="line"><a name="l00641"></a><span class="lineno"> 641</span>  data = tempdata[p][0]</div><div class="line"><a name="l00642"></a><span class="lineno"> 642</span>  elseif (ny <= 1)</div><div class="line"><a name="l00643"></a><span class="lineno"> 643</span>  redimension /n=(nx) data</div><div class="line"><a name="l00644"></a><span class="lineno"> 644</span>  setdimlabel 0, -1, AD_Dim0, data</div><div class="line"><a name="l00645"></a><span class="lineno"> 645</span>  data = tempdata[0][p]</div><div class="line"><a name="l00646"></a><span class="lineno"> 646</span>  else</div><div class="line"><a name="l00647"></a><span class="lineno"> 647</span>  redimension /n=(nx,ny) data</div><div class="line"><a name="l00648"></a><span class="lineno"> 648</span>  setdimlabel 0, -1, AD_Dim0, data</div><div class="line"><a name="l00649"></a><span class="lineno"> 649</span>  setdimlabel 1, -1, AD_Dim1, data</div><div class="line"><a name="l00650"></a><span class="lineno"> 650</span>  data = tempdata[q][p]</div><div class="line"><a name="l00651"></a><span class="lineno"> 651</span>  endif</div><div class="line"><a name="l00652"></a><span class="lineno"> 652</span>  break</div><div class="line"><a name="l00653"></a><span class="lineno"> 653</span>  case 3:</div><div class="line"><a name="l00654"></a><span class="lineno"> 654</span>  if (nx <= 1)</div><div class="line"><a name="l00655"></a><span class="lineno"> 655</span>  redimension /n=(ny,nz) data</div><div class="line"><a name="l00656"></a><span class="lineno"> 656</span>  setdimlabel 0, -1, AD_Dim1, data</div><div class="line"><a name="l00657"></a><span class="lineno"> 657</span>  setdimlabel 1, -1, AD_DimN, data</div><div class="line"><a name="l00658"></a><span class="lineno"> 658</span>  multithread data = tempdata[q][p][0]</div><div class="line"><a name="l00659"></a><span class="lineno"> 659</span>  elseif (ny <= 1)</div><div class="line"><a name="l00660"></a><span class="lineno"> 660</span>  redimension /n=(nx,nz) data</div><div class="line"><a name="l00661"></a><span class="lineno"> 661</span>  setdimlabel 0, -1, AD_Dim0, data</div><div class="line"><a name="l00662"></a><span class="lineno"> 662</span>  setdimlabel 1, -1, AD_DimN, data</div><div class="line"><a name="l00663"></a><span class="lineno"> 663</span>  multithread data = tempdata[q][0][p]</div><div class="line"><a name="l00664"></a><span class="lineno"> 664</span>  elseif (nz <= 1)</div><div class="line"><a name="l00665"></a><span class="lineno"> 665</span>  redimension /n=(nx,ny) data</div><div class="line"><a name="l00666"></a><span class="lineno"> 666</span>  setdimlabel 0, -1, AD_Dim0, data</div><div class="line"><a name="l00667"></a><span class="lineno"> 667</span>  setdimlabel 1, -1, AD_Dim1, data</div><div class="line"><a name="l00668"></a><span class="lineno"> 668</span>  multithread data = tempdata[0][q][p]</div><div class="line"><a name="l00669"></a><span class="lineno"> 669</span>  else</div><div class="line"><a name="l00670"></a><span class="lineno"> 670</span>  redimension /n=(nx,ny,nz) data</div><div class="line"><a name="l00671"></a><span class="lineno"> 671</span>  setdimlabel 0, -1, AD_Dim0, data</div><div class="line"><a name="l00672"></a><span class="lineno"> 672</span>  setdimlabel 1, -1, AD_Dim1, data</div><div class="line"><a name="l00673"></a><span class="lineno"> 673</span>  setdimlabel 2, -1, AD_DimN, data</div><div class="line"><a name="l00674"></a><span class="lineno"> 674</span>  multithread data = tempdata[r][q][p]</div><div class="line"><a name="l00675"></a><span class="lineno"> 675</span>  endif</div><div class="line"><a name="l00676"></a><span class="lineno"> 676</span>  break</div><div class="line"><a name="l00677"></a><span class="lineno"> 677</span>  case 4:</div><div class="line"><a name="l00678"></a><span class="lineno"> 678</span>  if (nz <= 1)</div><div class="line"><a name="l00679"></a><span class="lineno"> 679</span>  <span class="comment">// singleton "frame number" dimension</span></div><div class="line"><a name="l00680"></a><span class="lineno"> 680</span>  redimension /n=(nx,ny,nt) data</div><div class="line"><a name="l00681"></a><span class="lineno"> 681</span>  setdimlabel 0, -1, AD_Dim0, data</div><div class="line"><a name="l00682"></a><span class="lineno"> 682</span>  setdimlabel 1, -1, AD_Dim1, data</div><div class="line"><a name="l00683"></a><span class="lineno"> 683</span>  setdimlabel 2, -1, AD_DimX, data</div><div class="line"><a name="l00684"></a><span class="lineno"> 684</span>  multithread data = tempdata[r][0][q][p]</div><div class="line"><a name="l00685"></a><span class="lineno"> 685</span>  else</div><div class="line"><a name="l00686"></a><span class="lineno"> 686</span>  redimension /n=(nx,ny,nz,nt) data</div><div class="line"><a name="l00687"></a><span class="lineno"> 687</span>  setdimlabel 0, -1, AD_Dim0, data</div><div class="line"><a name="l00688"></a><span class="lineno"> 688</span>  setdimlabel 1, -1, AD_Dim1, data</div><div class="line"><a name="l00689"></a><span class="lineno"> 689</span>  setdimlabel 2, -1, AD_DimN, data</div><div class="line"><a name="l00690"></a><span class="lineno"> 690</span>  setdimlabel 3, -1, AD_DimX, data</div><div class="line"><a name="l00691"></a><span class="lineno"> 691</span>  multithread data = tempdata[s][r][q][p]</div><div class="line"><a name="l00692"></a><span class="lineno"> 692</span>  endif</div><div class="line"><a name="l00693"></a><span class="lineno"> 693</span>  break</div><div class="line"><a name="l00694"></a><span class="lineno"> 694</span>  endswitch</div><div class="line"><a name="l00695"></a><span class="lineno"> 695</span> end</div><div class="line"><a name="l00696"></a><span class="lineno"> 696</span> </div><div class="line"><a name="l00707"></a><span class="lineno"><a class="line" href="pearl-area-import_8ipf.html#aa3cdc56096a6a1bf2a2d80a6245a36d2"> 707</a></span> static function /DF <a class="code" href="pearl-area-import_8ipf.html#aa3cdc56096a6a1bf2a2d80a6245a36d2">GetAttrDataFolderDFR</a>(data)</div><div class="line"><a name="l00708"></a><span class="lineno"> 708</span>  wave data</div><div class="line"><a name="l00709"></a><span class="lineno"> 709</span>  </div><div class="line"><a name="l00710"></a><span class="lineno"> 710</span>  dfref dataDF = GetWavesDataFolderDFR(data)</div><div class="line"><a name="l00711"></a><span class="lineno"> 711</span>  dfref attrDF = dataDF:attr</div><div class="line"><a name="l00712"></a><span class="lineno"> 712</span>  if (DataFolderRefStatus(attrDF) == 0)</div><div class="line"><a name="l00713"></a><span class="lineno"> 713</span>  attrDF = dataDF</div><div class="line"><a name="l00714"></a><span class="lineno"> 714</span>  endif</div><div class="line"><a name="l00715"></a><span class="lineno"> 715</span>  </div><div class="line"><a name="l00716"></a><span class="lineno"> 716</span>  return attrDF</div><div class="line"><a name="l00717"></a><span class="lineno"> 717</span> end</div><div class="line"><a name="l00718"></a><span class="lineno"> 718</span> </div><div class="line"><a name="l00726"></a><span class="lineno"><a class="line" href="pearl-area-import_8ipf.html#a774751d1857ea6946a942448dc913128"> 726</a></span> function <a class="code" href="pearl-area-import_8ipf.html#a774751d1857ea6946a942448dc913128">adh5_scale</a>(data,[source])</div><div class="line"><a name="l00727"></a><span class="lineno"> 727</span>  wave data</div><div class="line"><a name="l00728"></a><span class="lineno"> 728</span>  <span class="keywordtype">string</span> source</div><div class="line"><a name="l00729"></a><span class="lineno"> 729</span> </div><div class="line"><a name="l00730"></a><span class="lineno"> 730</span>  dfref saveDF = GetDataFolderDFR()</div><div class="line"><a name="l00731"></a><span class="lineno"> 731</span>  dfref dataDF = GetWavesDataFolderDFR(data)</div><div class="line"><a name="l00732"></a><span class="lineno"> 732</span>  dfref attrDF = <a class="code" href="pearl-area-import_8ipf.html#aa3cdc56096a6a1bf2a2d80a6245a36d2">GetAttrDataFolderDFR</a>(data)</div><div class="line"><a name="l00733"></a><span class="lineno"> 733</span> </div><div class="line"><a name="l00734"></a><span class="lineno"> 734</span>  if (ParamIsDefault(source))</div><div class="line"><a name="l00735"></a><span class="lineno"> 735</span>  <span class="comment">// is the source a Scienta analyser?</span></div><div class="line"><a name="l00736"></a><span class="lineno"> 736</span>  wave /SDFR=attrDF /Z AcquisitionMode</div><div class="line"><a name="l00737"></a><span class="lineno"> 737</span>  wave /SDFR=attrDF /T /Z Manufacturer</div><div class="line"><a name="l00738"></a><span class="lineno"> 738</span>  source = "unknown"</div><div class="line"><a name="l00739"></a><span class="lineno"> 739</span>  if (waveexists(Manufacturer) && (numpnts(Manufacturer) >= 1))</div><div class="line"><a name="l00740"></a><span class="lineno"> 740</span>  strswitch(Manufacturer[0])</div><div class="line"><a name="l00741"></a><span class="lineno"> 741</span>  case "VG Scienta":</div><div class="line"><a name="l00742"></a><span class="lineno"> 742</span>  source = "scienta"</div><div class="line"><a name="l00743"></a><span class="lineno"> 743</span>  break</div><div class="line"><a name="l00744"></a><span class="lineno"> 744</span>  case "Prosilica":</div><div class="line"><a name="l00745"></a><span class="lineno"> 745</span>  source = "prosilica"</div><div class="line"><a name="l00746"></a><span class="lineno"> 746</span>  break</div><div class="line"><a name="l00747"></a><span class="lineno"> 747</span>  endswitch</div><div class="line"><a name="l00748"></a><span class="lineno"> 748</span>  elseif (waveexists(AcquisitionMode) && (numpnts(AcquisitionMode) >= 1))</div><div class="line"><a name="l00749"></a><span class="lineno"> 749</span>  if (stringmatch(note(AcquisitionMode), "*SCIENTA*"))</div><div class="line"><a name="l00750"></a><span class="lineno"> 750</span>  source = "scienta"</div><div class="line"><a name="l00751"></a><span class="lineno"> 751</span>  endif</div><div class="line"><a name="l00752"></a><span class="lineno"> 752</span>  endif</div><div class="line"><a name="l00753"></a><span class="lineno"> 753</span>  endif</div><div class="line"><a name="l00754"></a><span class="lineno"> 754</span>  </div><div class="line"><a name="l00755"></a><span class="lineno"> 755</span>  strswitch(source)</div><div class="line"><a name="l00756"></a><span class="lineno"> 756</span>  case "prosilica":</div><div class="line"><a name="l00757"></a><span class="lineno"> 757</span>  <span class="comment">// pixel scale - nothing to do</span></div><div class="line"><a name="l00758"></a><span class="lineno"> 758</span>  break</div><div class="line"><a name="l00759"></a><span class="lineno"> 759</span>  case "scienta":</div><div class="line"><a name="l00760"></a><span class="lineno"> 760</span>  <a class="code" href="pearl-area-import_8ipf.html#a227e4db1c51a910dcf86d355473fe74e">adh5_scale_scienta</a>(data)</div><div class="line"><a name="l00761"></a><span class="lineno"> 761</span>  break</div><div class="line"><a name="l00762"></a><span class="lineno"> 762</span>  endswitch</div><div class="line"><a name="l00763"></a><span class="lineno"> 763</span> </div><div class="line"><a name="l00764"></a><span class="lineno"> 764</span>  setdatafolder saveDF </div><div class="line"><a name="l00765"></a><span class="lineno"> 765</span> end</div><div class="line"><a name="l00766"></a><span class="lineno"> 766</span> </div><div class="line"><a name="l00780"></a><span class="lineno"><a class="line" href="pearl-area-import_8ipf.html#a4a9741d1c19b10bb98b73bd5163a497b"> 780</a></span> function <a class="code" href="pearl-area-import_8ipf.html#a4a9741d1c19b10bb98b73bd5163a497b">adh5_load_detector_slabs</a>(fileID, detectorpath, [progress])</div><div class="line"><a name="l00781"></a><span class="lineno"> 781</span>  variable fileID</div><div class="line"><a name="l00782"></a><span class="lineno"> 782</span>  <span class="keywordtype">string</span> detectorpath</div><div class="line"><a name="l00783"></a><span class="lineno"> 783</span>  variable progress</div><div class="line"><a name="l00784"></a><span class="lineno"> 784</span>  </div><div class="line"><a name="l00785"></a><span class="lineno"> 785</span>  if (ParamIsDefault(progress))</div><div class="line"><a name="l00786"></a><span class="lineno"> 786</span>  progress = 1</div><div class="line"><a name="l00787"></a><span class="lineno"> 787</span>  endif</div><div class="line"><a name="l00788"></a><span class="lineno"> 788</span>  variable result = 0</div><div class="line"><a name="l00789"></a><span class="lineno"> 789</span> </div><div class="line"><a name="l00790"></a><span class="lineno"> 790</span>  <span class="comment">// avoid compilation error if HDF5 XOP has not been loaded</span></div><div class="line"><a name="l00791"></a><span class="lineno"> 791</span>  <span class="preprocessor">#if Exists("HDF5LoadData")</span></div><div class="line"><a name="l00792"></a><span class="lineno"> 792</span>  <span class="keywordtype">string</span> datasetname</div><div class="line"><a name="l00793"></a><span class="lineno"> 793</span>  <span class="keywordtype">string</span> datawavename</div><div class="line"><a name="l00794"></a><span class="lineno"> 794</span> </div><div class="line"><a name="l00795"></a><span class="lineno"> 795</span>  <span class="comment">// detector data</span></div><div class="line"><a name="l00796"></a><span class="lineno"> 796</span>  datasetname = detectorpath + <span class="stringliteral">"data"</span></div><div class="line"><a name="l00797"></a><span class="lineno"> 797</span>  STRUCT HDF5DataInfo di <span class="comment">// Defined in HDF5 Browser.ipf.</span></div><div class="line"><a name="l00798"></a><span class="lineno"> 798</span>  InitHDF5DataInfo(di)</div><div class="line"><a name="l00799"></a><span class="lineno"> 799</span>  variable err = HDF5DatasetInfo(fileID, datasetname, 0, di)</div><div class="line"><a name="l00800"></a><span class="lineno"> 800</span>  <span class="keywordflow">if</span> (err != 0)</div><div class="line"><a name="l00801"></a><span class="lineno"> 801</span>  print <span class="stringliteral">"error accessing detector/data"</span></div><div class="line"><a name="l00802"></a><span class="lineno"> 802</span>  <span class="keywordflow">return</span> -1</div><div class="line"><a name="l00803"></a><span class="lineno"> 803</span>  endif</div><div class="line"><a name="l00804"></a><span class="lineno"> 804</span>  <span class="keywordflow">if</span> (di.ndims < 2)</div><div class="line"><a name="l00805"></a><span class="lineno"> 805</span>  print <span class="stringliteral">"error: rank of dataset < 2"</span></div><div class="line"><a name="l00806"></a><span class="lineno"> 806</span>  <span class="keywordflow">return</span> -2</div><div class="line"><a name="l00807"></a><span class="lineno"> 807</span>  endif</div><div class="line"><a name="l00808"></a><span class="lineno"> 808</span>  </div><div class="line"><a name="l00809"></a><span class="lineno"> 809</span>  <span class="comment">// nx and nz are the image dimensions</span></div><div class="line"><a name="l00810"></a><span class="lineno"> 810</span>  variable idx, idy, idz, idt, izt</div><div class="line"><a name="l00811"></a><span class="lineno"> 811</span>  idx = di.ndims - 1</div><div class="line"><a name="l00812"></a><span class="lineno"> 812</span>  idy = di.ndims - 2</div><div class="line"><a name="l00813"></a><span class="lineno"> 813</span>  idz = -1</div><div class="line"><a name="l00814"></a><span class="lineno"> 814</span>  idt = -1</div><div class="line"><a name="l00815"></a><span class="lineno"> 815</span>  </div><div class="line"><a name="l00816"></a><span class="lineno"> 816</span>  variable nx, ny, nz, nt, nzt</div><div class="line"><a name="l00817"></a><span class="lineno"> 817</span>  nx = di.dims[idx]</div><div class="line"><a name="l00818"></a><span class="lineno"> 818</span>  ny = di.dims[idy]</div><div class="line"><a name="l00819"></a><span class="lineno"> 819</span>  nz = 1</div><div class="line"><a name="l00820"></a><span class="lineno"> 820</span>  nt = 1</div><div class="line"><a name="l00821"></a><span class="lineno"> 821</span>  </div><div class="line"><a name="l00822"></a><span class="lineno"> 822</span>  make /n=(nx,ny,nz,nt) /o data</div><div class="line"><a name="l00823"></a><span class="lineno"> 823</span>  <span class="keywordtype">string</span> dim_labels = <span class="stringliteral">"AD_Dim0;AD_Dim1;AD_DimN;AD_DimX;AD_DimY"</span></div><div class="line"><a name="l00824"></a><span class="lineno"> 824</span>  <span class="keywordtype">string</span> dim_label</div><div class="line"><a name="l00825"></a><span class="lineno"> 825</span>  dim_label = StringFromList(0, dim_labels, <span class="stringliteral">";"</span>)</div><div class="line"><a name="l00826"></a><span class="lineno"> 826</span>  setdimlabel 0, -1, $dim_label, data</div><div class="line"><a name="l00827"></a><span class="lineno"> 827</span>  dim_labels = RemoveFromList(dim_label, dim_labels, <span class="stringliteral">";"</span>)</div><div class="line"><a name="l00828"></a><span class="lineno"> 828</span>  dim_label = StringFromList(0, dim_labels, ";")</div><div class="line"><a name="l00829"></a><span class="lineno"> 829</span>  setdimlabel 1, -1, $dim_label, data</div><div class="line"><a name="l00830"></a><span class="lineno"> 830</span>  dim_labels = RemoveFromList(dim_label, dim_labels, ";")</div><div class="line"><a name="l00831"></a><span class="lineno"> 831</span> </div><div class="line"><a name="l00832"></a><span class="lineno"> 832</span>  <span class="comment">// find additional dimensions, ignore singletons</span></div><div class="line"><a name="l00833"></a><span class="lineno"> 833</span>  variable <span class="keywordtype">id</span></div><div class="line"><a name="l00834"></a><span class="lineno"> 834</span>  for (<span class="keywordtype">id</span> = idy - 1; (<span class="keywordtype">id</span> >= 0) && (nz == 1); <span class="keywordtype">id</span> -= 1)</div><div class="line"><a name="l00835"></a><span class="lineno"> 835</span>  if (di.dims[<span class="keywordtype">id</span>] > 1)</div><div class="line"><a name="l00836"></a><span class="lineno"> 836</span>  idz = <span class="keywordtype">id</span></div><div class="line"><a name="l00837"></a><span class="lineno"> 837</span>  nz = di.dims[<span class="keywordtype">id</span>]</div><div class="line"><a name="l00838"></a><span class="lineno"> 838</span>  dim_label = StringFromList(0, dim_labels, ";")</div><div class="line"><a name="l00839"></a><span class="lineno"> 839</span>  setdimlabel 2, -1, $dim_label, data</div><div class="line"><a name="l00840"></a><span class="lineno"> 840</span>  endif</div><div class="line"><a name="l00841"></a><span class="lineno"> 841</span>  dim_labels = RemoveListItem(0, dim_labels, ";")</div><div class="line"><a name="l00842"></a><span class="lineno"> 842</span>  endfor</div><div class="line"><a name="l00843"></a><span class="lineno"> 843</span>  for (<span class="keywordtype">id</span> = idz - 1; (<span class="keywordtype">id</span> >= 0) && (nt == 1); <span class="keywordtype">id</span> -= 1)</div><div class="line"><a name="l00844"></a><span class="lineno"> 844</span>  if (di.dims[<span class="keywordtype">id</span>] > 1)</div><div class="line"><a name="l00845"></a><span class="lineno"> 845</span>  idt = <span class="keywordtype">id</span></div><div class="line"><a name="l00846"></a><span class="lineno"> 846</span>  nt = di.dims[<span class="keywordtype">id</span>]</div><div class="line"><a name="l00847"></a><span class="lineno"> 847</span>  dim_label = StringFromList(0, dim_labels, ";")</div><div class="line"><a name="l00848"></a><span class="lineno"> 848</span>  setdimlabel 3, -1, $dim_label, data</div><div class="line"><a name="l00849"></a><span class="lineno"> 849</span>  endif</div><div class="line"><a name="l00850"></a><span class="lineno"> 850</span>  dim_labels = RemoveListItem(0, dim_labels, ";")</div><div class="line"><a name="l00851"></a><span class="lineno"> 851</span>  endfor</div><div class="line"><a name="l00852"></a><span class="lineno"> 852</span>  redimension /n=(nx,ny,nz,nt) data</div><div class="line"><a name="l00853"></a><span class="lineno"> 853</span> </div><div class="line"><a name="l00854"></a><span class="lineno"> 854</span>  <span class="comment">// default values if dimensions are not present in dataset</span></div><div class="line"><a name="l00855"></a><span class="lineno"> 855</span>  if (idz < 0)</div><div class="line"><a name="l00856"></a><span class="lineno"> 856</span>  idz = idx + 1</div><div class="line"><a name="l00857"></a><span class="lineno"> 857</span>  idt = idz + 1</div><div class="line"><a name="l00858"></a><span class="lineno"> 858</span>  elseif (idt < 0)</div><div class="line"><a name="l00859"></a><span class="lineno"> 859</span>  idt = idx + 1</div><div class="line"><a name="l00860"></a><span class="lineno"> 860</span>  endif</div><div class="line"><a name="l00861"></a><span class="lineno"> 861</span>  </div><div class="line"><a name="l00862"></a><span class="lineno"> 862</span>  nzt = nz * nt</div><div class="line"><a name="l00863"></a><span class="lineno"> 863</span>  izt = 0</div><div class="line"><a name="l00864"></a><span class="lineno"> 864</span>  if (progress)</div><div class="line"><a name="l00865"></a><span class="lineno"> 865</span>  <a class="code" href="pearl-gui-tools_8ipf.html#aaf29d090c81e00cf44af295193b24c5a">display_progress_panel</a>("HDF5 Import", "Loading data...", nzt)</div><div class="line"><a name="l00866"></a><span class="lineno"> 866</span>  endif</div><div class="line"><a name="l00867"></a><span class="lineno"> 867</span>  </div><div class="line"><a name="l00868"></a><span class="lineno"> 868</span>  <span class="comment">// load data image by image</span></div><div class="line"><a name="l00869"></a><span class="lineno"> 869</span>  HDF5MakeHyperslabWave(GetDataFolder(1) + "slab", max(di.ndims, 4))</div><div class="line"><a name="l00870"></a><span class="lineno"> 870</span>  wave slab</div><div class="line"><a name="l00871"></a><span class="lineno"> 871</span>  slab[][%Start] = 0</div><div class="line"><a name="l00872"></a><span class="lineno"> 872</span>  slab[][%Stride] = 1</div><div class="line"><a name="l00873"></a><span class="lineno"> 873</span>  slab[][%Count] = 1</div><div class="line"><a name="l00874"></a><span class="lineno"> 874</span>  slab[][%Block] = 1</div><div class="line"><a name="l00875"></a><span class="lineno"> 875</span>  slab[idx][%Block] = nx</div><div class="line"><a name="l00876"></a><span class="lineno"> 876</span>  slab[idy][%Block] = ny</div><div class="line"><a name="l00877"></a><span class="lineno"> 877</span>  </div><div class="line"><a name="l00878"></a><span class="lineno"> 878</span>  variable iz, it</div><div class="line"><a name="l00879"></a><span class="lineno"> 879</span>  for (iz = 0; iz < nz; iz += 1)</div><div class="line"><a name="l00880"></a><span class="lineno"> 880</span>  for (it = 0; it < nt; it += 1)</div><div class="line"><a name="l00881"></a><span class="lineno"> 881</span>  slab[idz][%Start] = iz</div><div class="line"><a name="l00882"></a><span class="lineno"> 882</span>  slab[idt][%Start] = it</div><div class="line"><a name="l00883"></a><span class="lineno"> 883</span>  HDF5LoadData /O /Q /Z /SLAB=slab /N=slabdata fileID, datasetname</div><div class="line"><a name="l00884"></a><span class="lineno"> 884</span>  wave slabdata <span class="comment">// 2D, 3D, or 4D with singletons</span></div><div class="line"><a name="l00885"></a><span class="lineno"> 885</span>  switch (WaveDims(slabdata))</div><div class="line"><a name="l00886"></a><span class="lineno"> 886</span>  case 2:</div><div class="line"><a name="l00887"></a><span class="lineno"> 887</span>  data[][][iz][it] = slabdata[q][p]</div><div class="line"><a name="l00888"></a><span class="lineno"> 888</span>  break</div><div class="line"><a name="l00889"></a><span class="lineno"> 889</span>  case 3:</div><div class="line"><a name="l00890"></a><span class="lineno"> 890</span>  data[][][iz][it] = slabdata[0][q][p]</div><div class="line"><a name="l00891"></a><span class="lineno"> 891</span>  break</div><div class="line"><a name="l00892"></a><span class="lineno"> 892</span>  case 4:</div><div class="line"><a name="l00893"></a><span class="lineno"> 893</span>  data[][][iz][it] = slabdata[0][0][q][p]</div><div class="line"><a name="l00894"></a><span class="lineno"> 894</span>  break</div><div class="line"><a name="l00895"></a><span class="lineno"> 895</span>  endswitch</div><div class="line"><a name="l00896"></a><span class="lineno"> 896</span>  <span class="comment">// progress window</span></div><div class="line"><a name="l00897"></a><span class="lineno"> 897</span>  izt += 1</div><div class="line"><a name="l00898"></a><span class="lineno"> 898</span>  if (progress)</div><div class="line"><a name="l00899"></a><span class="lineno"> 899</span>  if (<a class="code" href="pearl-gui-tools_8ipf.html#a97ad19d83cf0007c4bcf97a32164610f">update_progress_panel</a>(izt))</div><div class="line"><a name="l00900"></a><span class="lineno"> 900</span>  result = -4 <span class="comment">// user abort</span></div><div class="line"><a name="l00901"></a><span class="lineno"> 901</span>  break</div><div class="line"><a name="l00902"></a><span class="lineno"> 902</span>  endif</div><div class="line"><a name="l00903"></a><span class="lineno"> 903</span>  endif</div><div class="line"><a name="l00904"></a><span class="lineno"> 904</span>  endfor</div><div class="line"><a name="l00905"></a><span class="lineno"> 905</span>  if (result < 0)</div><div class="line"><a name="l00906"></a><span class="lineno"> 906</span>  break</div><div class="line"><a name="l00907"></a><span class="lineno"> 907</span>  endif</div><div class="line"><a name="l00908"></a><span class="lineno"> 908</span>  endfor</div><div class="line"><a name="l00909"></a><span class="lineno"> 909</span>  </div><div class="line"><a name="l00910"></a><span class="lineno"> 910</span>  if (nz == 1)</div><div class="line"><a name="l00911"></a><span class="lineno"> 911</span>  redimension /n=(nx,ny) data</div><div class="line"><a name="l00912"></a><span class="lineno"> 912</span>  elseif (nt == 1)</div><div class="line"><a name="l00913"></a><span class="lineno"> 913</span>  redimension /n=(nx,ny,nz) data</div><div class="line"><a name="l00914"></a><span class="lineno"> 914</span>  endif</div><div class="line"><a name="l00915"></a><span class="lineno"> 915</span>  </div><div class="line"><a name="l00916"></a><span class="lineno"> 916</span>  if (progress)</div><div class="line"><a name="l00917"></a><span class="lineno"> 917</span>  <a class="code" href="pearl-gui-tools_8ipf.html#aca0a41a0f28a35ac7535df30ddbd79fe">kill_progress_panel</a>()</div><div class="line"><a name="l00918"></a><span class="lineno"> 918</span>  endif</div><div class="line"><a name="l00919"></a><span class="lineno"> 919</span>  <span class="preprocessor">#else</span></div><div class="line"><a name="l00920"></a><span class="lineno"> 920</span>  Abort <span class="stringliteral">"HDF5 XOP not loaded."</span></div><div class="line"><a name="l00921"></a><span class="lineno"> 921</span> <span class="preprocessor"> #endif</span></div><div class="line"><a name="l00922"></a><span class="lineno"> 922</span>  </div><div class="line"><a name="l00923"></a><span class="lineno"> 923</span>  <span class="keywordflow">return</span> result</div><div class="line"><a name="l00924"></a><span class="lineno"> 924</span> end</div><div class="line"><a name="l00925"></a><span class="lineno"> 925</span> </div><div class="line"><a name="l00945"></a><span class="lineno"><a class="line" href="pearl-area-import_8ipf.html#a931a7bfaaf75d308a0ce3c74ffc751bc"> 945</a></span> <span class="keyword">function</span> <a class="code" href="pearl-area-import_8ipf.html#a931a7bfaaf75d308a0ce3c74ffc751bc">adh5_load_detector_image</a>(fileID, detectorpath, dim2start, dim2count, dim3start, dim3count)</div><div class="line"><a name="l00946"></a><span class="lineno"> 946</span>  variable fileID</div><div class="line"><a name="l00947"></a><span class="lineno"> 947</span>  <span class="keywordtype">string</span> detectorpath</div><div class="line"><a name="l00948"></a><span class="lineno"> 948</span>  variable dim2start</div><div class="line"><a name="l00949"></a><span class="lineno"> 949</span>  variable dim2count</div><div class="line"><a name="l00950"></a><span class="lineno"> 950</span>  variable dim3start</div><div class="line"><a name="l00951"></a><span class="lineno"> 951</span>  variable dim3count</div><div class="line"><a name="l00952"></a><span class="lineno"> 952</span>  </div><div class="line"><a name="l00953"></a><span class="lineno"> 953</span>  <span class="comment">// avoid compilation error if HDF5 XOP has not been loaded</span></div><div class="line"><a name="l00954"></a><span class="lineno"> 954</span> <span class="preprocessor"> #if Exists("HDF5LoadData")</span></div><div class="line"><a name="l00955"></a><span class="lineno"> 955</span>  <span class="keywordtype">string</span> datasetname</div><div class="line"><a name="l00956"></a><span class="lineno"> 956</span>  <span class="keywordtype">string</span> datawavename</div><div class="line"><a name="l00957"></a><span class="lineno"> 957</span> </div><div class="line"><a name="l00958"></a><span class="lineno"> 958</span>  <span class="comment">// detector data</span></div><div class="line"><a name="l00959"></a><span class="lineno"> 959</span>  datasetname = detectorpath + <span class="stringliteral">"data"</span></div><div class="line"><a name="l00960"></a><span class="lineno"> 960</span>  STRUCT HDF5DataInfo di <span class="comment">// Defined in HDF5 Browser.ipf.</span></div><div class="line"><a name="l00961"></a><span class="lineno"> 961</span>  InitHDF5DataInfo(di)</div><div class="line"><a name="l00962"></a><span class="lineno"> 962</span>  variable err = HDF5DatasetInfo(fileID, datasetname, 0, di)</div><div class="line"><a name="l00963"></a><span class="lineno"> 963</span>  <span class="keywordflow">if</span> (err != 0)</div><div class="line"><a name="l00964"></a><span class="lineno"> 964</span>  print <span class="stringliteral">"error accessing detector/data"</span></div><div class="line"><a name="l00965"></a><span class="lineno"> 965</span>  <span class="keywordflow">return</span> -1</div><div class="line"><a name="l00966"></a><span class="lineno"> 966</span>  endif</div><div class="line"><a name="l00967"></a><span class="lineno"> 967</span>  <span class="keywordflow">if</span> (di.ndims < 1)</div><div class="line"><a name="l00968"></a><span class="lineno"> 968</span>  print <span class="stringliteral">"error: rank of dataset < 1"</span></div><div class="line"><a name="l00969"></a><span class="lineno"> 969</span>  <span class="keywordflow">return</span> -2</div><div class="line"><a name="l00970"></a><span class="lineno"> 970</span>  endif</div><div class="line"><a name="l00971"></a><span class="lineno"> 971</span>  </div><div class="line"><a name="l00972"></a><span class="lineno"> 972</span>  <span class="comment">// nx and nz are the image dimensions</span></div><div class="line"><a name="l00973"></a><span class="lineno"> 973</span>  variable idx, idy, idz, idt</div><div class="line"><a name="l00974"></a><span class="lineno"> 974</span>  idx = di.ndims - 1</div><div class="line"><a name="l00975"></a><span class="lineno"> 975</span>  idy = di.ndims >= 2 ? di.ndims - 2 : 1</div><div class="line"><a name="l00976"></a><span class="lineno"> 976</span>  idz = di.ndims >= 3 ? di.ndims - 3 : 2</div><div class="line"><a name="l00977"></a><span class="lineno"> 977</span>  idt = di.ndims >= 4 ? di.ndims - 4 : 3</div><div class="line"><a name="l00978"></a><span class="lineno"> 978</span>  </div><div class="line"><a name="l00979"></a><span class="lineno"> 979</span>  variable nx, ny</div><div class="line"><a name="l00980"></a><span class="lineno"> 980</span>  nx = di.dims[idx]</div><div class="line"><a name="l00981"></a><span class="lineno"> 981</span>  ny = di.ndims >= 2 ? di.dims[idy] : 1</div><div class="line"><a name="l00982"></a><span class="lineno"> 982</span>  </div><div class="line"><a name="l00983"></a><span class="lineno"> 983</span>  variable dim2end = dim2start + dim2count - 1</div><div class="line"><a name="l00984"></a><span class="lineno"> 984</span>  variable dim3end = dim3start + dim3count - 1</div><div class="line"><a name="l00985"></a><span class="lineno"> 985</span>  </div><div class="line"><a name="l00986"></a><span class="lineno"> 986</span>  <span class="comment">// the slab wave is at least 4-dimensional</span></div><div class="line"><a name="l00987"></a><span class="lineno"> 987</span>  <span class="comment">// it will also load lower-dimensional datasets</span></div><div class="line"><a name="l00988"></a><span class="lineno"> 988</span>  HDF5MakeHyperslabWave(GetDataFolder(1) + <span class="stringliteral">"slab"</span>, max(di.ndims, 4))</div><div class="line"><a name="l00989"></a><span class="lineno"> 989</span>  wave slab</div><div class="line"><a name="l00990"></a><span class="lineno"> 990</span>  slab[][%Start] = 0</div><div class="line"><a name="l00991"></a><span class="lineno"> 991</span>  slab[][%Stride] = 1</div><div class="line"><a name="l00992"></a><span class="lineno"> 992</span>  slab[][%Count] = 1</div><div class="line"><a name="l00993"></a><span class="lineno"> 993</span>  slab[][%Block] = 1</div><div class="line"><a name="l00994"></a><span class="lineno"> 994</span>  slab[idx][%Block] = nx</div><div class="line"><a name="l00995"></a><span class="lineno"> 995</span>  slab[idy][%Block] = ny</div><div class="line"><a name="l00996"></a><span class="lineno"> 996</span>  </div><div class="line"><a name="l00997"></a><span class="lineno"> 997</span>  make /n=(nx,ny)/o/d data</div><div class="line"><a name="l00998"></a><span class="lineno"> 998</span>  data = 0</div><div class="line"><a name="l00999"></a><span class="lineno"> 999</span>  variable iz, it</div><div class="line"><a name="l01000"></a><span class="lineno"> 1000</span>  variable navg = 0</div><div class="line"><a name="l01001"></a><span class="lineno"> 1001</span>  for (iz = dim2start; iz <= dim2end; iz += 1)</div><div class="line"><a name="l01002"></a><span class="lineno"> 1002</span>  for (it = dim3start; it <= dim3end; it += 1)</div><div class="line"><a name="l01003"></a><span class="lineno"> 1003</span>  slab[idz][%Start] = iz</div><div class="line"><a name="l01004"></a><span class="lineno"> 1004</span>  slab[idt][%Start] = it</div><div class="line"><a name="l01005"></a><span class="lineno"> 1005</span>  HDF5LoadData /O /Q /Z /SLAB=slab /N=slabdata fileID, datasetname</div><div class="line"><a name="l01006"></a><span class="lineno"> 1006</span>  wave slabdata <span class="comment">// 2D, 3D, or 4D with singletons</span></div><div class="line"><a name="l01007"></a><span class="lineno"> 1007</span>  switch (WaveDims(slabdata))</div><div class="line"><a name="l01008"></a><span class="lineno"> 1008</span>  case 1:</div><div class="line"><a name="l01009"></a><span class="lineno"> 1009</span>  data += slabdata[p]</div><div class="line"><a name="l01010"></a><span class="lineno"> 1010</span>  navg += 1</div><div class="line"><a name="l01011"></a><span class="lineno"> 1011</span>  break</div><div class="line"><a name="l01012"></a><span class="lineno"> 1012</span>  case 2:</div><div class="line"><a name="l01013"></a><span class="lineno"> 1013</span>  data += slabdata[q][p]</div><div class="line"><a name="l01014"></a><span class="lineno"> 1014</span>  navg += 1</div><div class="line"><a name="l01015"></a><span class="lineno"> 1015</span>  break</div><div class="line"><a name="l01016"></a><span class="lineno"> 1016</span>  case 3:</div><div class="line"><a name="l01017"></a><span class="lineno"> 1017</span>  data += slabdata[0][q][p]</div><div class="line"><a name="l01018"></a><span class="lineno"> 1018</span>  navg += 1</div><div class="line"><a name="l01019"></a><span class="lineno"> 1019</span>  break</div><div class="line"><a name="l01020"></a><span class="lineno"> 1020</span>  case 4:</div><div class="line"><a name="l01021"></a><span class="lineno"> 1021</span>  data += slabdata[0][0][q][p]</div><div class="line"><a name="l01022"></a><span class="lineno"> 1022</span>  navg += 1</div><div class="line"><a name="l01023"></a><span class="lineno"> 1023</span>  break</div><div class="line"><a name="l01024"></a><span class="lineno"> 1024</span>  endswitch</div><div class="line"><a name="l01025"></a><span class="lineno"> 1025</span>  endfor</div><div class="line"><a name="l01026"></a><span class="lineno"> 1026</span>  endfor</div><div class="line"><a name="l01027"></a><span class="lineno"> 1027</span>  data /= navg</div><div class="line"><a name="l01028"></a><span class="lineno"> 1028</span>  setdimlabel 0, -1, AD_Dim0, data</div><div class="line"><a name="l01029"></a><span class="lineno"> 1029</span>  setdimlabel 1, -1, AD_Dim1, data</div><div class="line"><a name="l01030"></a><span class="lineno"> 1030</span>  </div><div class="line"><a name="l01031"></a><span class="lineno"> 1031</span>  <span class="preprocessor">#else</span></div><div class="line"><a name="l01032"></a><span class="lineno"> 1032</span>  Abort <span class="stringliteral">"HDF5 XOP not loaded."</span></div><div class="line"><a name="l01033"></a><span class="lineno"> 1033</span> <span class="preprocessor"> #endif</span></div><div class="line"><a name="l01034"></a><span class="lineno"> 1034</span> end</div><div class="line"><a name="l01035"></a><span class="lineno"> 1035</span> </div><div class="line"><a name="l01041"></a><span class="lineno"><a class="line" href="pearl-area-import_8ipf.html#aa5e29dc1a380311d00a5f85be867e47b"> 1041</a></span> <span class="keyword">function</span> /s <a class="code" href="pearl-area-import_8ipf.html#aa5e29dc1a380311d00a5f85be867e47b">adh5_list_reduction_funcs</a>()</div><div class="line"><a name="l01042"></a><span class="lineno"> 1042</span>  string all_funcs = FunctionList("*", ";", "KIND:6,NPARAMS:2,VALTYPE:8")</div><div class="line"><a name="l01043"></a><span class="lineno"> 1043</span>  <span class="keywordtype">string</span> result = ""</div><div class="line"><a name="l01044"></a><span class="lineno"> 1044</span>  </div><div class="line"><a name="l01045"></a><span class="lineno"> 1045</span>  variable ii</div><div class="line"><a name="l01046"></a><span class="lineno"> 1046</span>  variable nn = ItemsInList(all_funcs, ";")</div><div class="line"><a name="l01047"></a><span class="lineno"> 1047</span>  </div><div class="line"><a name="l01048"></a><span class="lineno"> 1048</span>  <span class="keywordtype">string</span> funcname</div><div class="line"><a name="l01049"></a><span class="lineno"> 1049</span>  <span class="keywordtype">string</span> info</div><div class="line"><a name="l01050"></a><span class="lineno"> 1050</span>  variable nparams</div><div class="line"><a name="l01051"></a><span class="lineno"> 1051</span>  variable accept</div><div class="line"><a name="l01052"></a><span class="lineno"> 1052</span>  </div><div class="line"><a name="l01053"></a><span class="lineno"> 1053</span>  for (ii = 0; ii < nn; ii += 1)</div><div class="line"><a name="l01054"></a><span class="lineno"> 1054</span>  funcname = StringFromList(ii, all_funcs, ";")</div><div class="line"><a name="l01055"></a><span class="lineno"> 1055</span>  info = FunctionInfo(funcname)</div><div class="line"><a name="l01056"></a><span class="lineno"> 1056</span>  accept = (NumberByKey("RETURNTYPE", info, ":", ";") == 0x4000)</div><div class="line"><a name="l01057"></a><span class="lineno"> 1057</span>  accept = accept && (cmpstr(StringByKey("THREADSAFE", info, ":", ";"), "yes") == 0)</div><div class="line"><a name="l01058"></a><span class="lineno"> 1058</span>  accept = accept && (NumberByKey("N_PARAMS", info, ":", ";") == 2)</div><div class="line"><a name="l01059"></a><span class="lineno"> 1059</span>  accept = accept && (NumberByKey("N_OPT_PARAMS", info, ":", ";") == 0)</div><div class="line"><a name="l01060"></a><span class="lineno"> 1060</span>  if (accept)</div><div class="line"><a name="l01061"></a><span class="lineno"> 1061</span>  <span class="comment">// one numeric wave and one pass-by-reference string</span></div><div class="line"><a name="l01062"></a><span class="lineno"> 1062</span>  accept = accept && (NumberByKey("PARAM_0_TYPE", info, ":", ";") == 0x4002)</div><div class="line"><a name="l01063"></a><span class="lineno"> 1063</span>  accept = accept && (NumberByKey("PARAM_1_TYPE", info, ":", ";") == 0x3000)</div><div class="line"><a name="l01064"></a><span class="lineno"> 1064</span>  endif</div><div class="line"><a name="l01065"></a><span class="lineno"> 1065</span>  if (accept)</div><div class="line"><a name="l01066"></a><span class="lineno"> 1066</span>  result = AddListItem(funcname, result, ";")</div><div class="line"><a name="l01067"></a><span class="lineno"> 1067</span>  endif</div><div class="line"><a name="l01068"></a><span class="lineno"> 1068</span>  endfor</div><div class="line"><a name="l01069"></a><span class="lineno"> 1069</span>  </div><div class="line"><a name="l01070"></a><span class="lineno"> 1070</span>  result = SortList(result, ";", 4)</div><div class="line"><a name="l01071"></a><span class="lineno"> 1071</span>  return result</div><div class="line"><a name="l01072"></a><span class="lineno"> 1072</span> end</div><div class="line"><a name="l01073"></a><span class="lineno"> 1073</span> </div><div class="line"><a name="l01111"></a><span class="lineno"><a class="line" href="pearl-area-import_8ipf.html#ade69cb0f82e0c9cf6082d5fcc29f742f"> 1111</a></span> threadsafe function /wave <a class="code" href="pearl-area-import_8ipf.html#ade69cb0f82e0c9cf6082d5fcc29f742f">adh5_default_reduction</a>(source, param)</div><div class="line"><a name="l01112"></a><span class="lineno"> 1112</span>  wave source</div><div class="line"><a name="l01113"></a><span class="lineno"> 1113</span>  <span class="keywordtype">string</span> &param</div><div class="line"><a name="l01114"></a><span class="lineno"> 1114</span>  </div><div class="line"><a name="l01115"></a><span class="lineno"> 1115</span>  <span class="comment">// demo code</span></div><div class="line"><a name="l01116"></a><span class="lineno"> 1116</span>  <span class="comment">// integrate along the dimensions</span></div><div class="line"><a name="l01117"></a><span class="lineno"> 1117</span>  make /n=0 /free dest1, dest2</div><div class="line"><a name="l01118"></a><span class="lineno"> 1118</span>  <a class="code" href="pearl-area-import_8ipf.html#a9439de3b676e686eeca4e6b2588c01a6">adh5_setup_profile</a>(source, dest1, 0)</div><div class="line"><a name="l01119"></a><span class="lineno"> 1119</span>  <a class="code" href="pearl-area-profiles_8ipf.html#aa40fd5049f993e72fd52a66a6cdde7cc">ad_profile_x_w</a>(source, 0, -1, dest1)</div><div class="line"><a name="l01120"></a><span class="lineno"> 1120</span>  <a class="code" href="pearl-area-import_8ipf.html#a9439de3b676e686eeca4e6b2588c01a6">adh5_setup_profile</a>(source, dest2, 1)</div><div class="line"><a name="l01121"></a><span class="lineno"> 1121</span>  <a class="code" href="pearl-area-profiles_8ipf.html#a8b09e13162fa47cc076e1e661e80b002">ad_profile_y_w</a>(source, 0, -1, dest2)</div><div class="line"><a name="l01122"></a><span class="lineno"> 1122</span>  </div><div class="line"><a name="l01123"></a><span class="lineno"> 1123</span>  make /n=2 /free /wave results</div><div class="line"><a name="l01124"></a><span class="lineno"> 1124</span>  results[0] = dest1</div><div class="line"><a name="l01125"></a><span class="lineno"> 1125</span>  results[1] = dest2</div><div class="line"><a name="l01126"></a><span class="lineno"> 1126</span>  return results</div><div class="line"><a name="l01127"></a><span class="lineno"> 1127</span> end</div><div class="line"><a name="l01128"></a><span class="lineno"> 1128</span> </div><div class="line"><a name="l01134"></a><span class="lineno"><a class="line" href="pearl-area-import_8ipf.html#a9439de3b676e686eeca4e6b2588c01a6"> 1134</a></span> threadsafe function <a class="code" href="pearl-area-import_8ipf.html#a9439de3b676e686eeca4e6b2588c01a6">adh5_setup_profile</a>(image, profile, dim)</div><div class="line"><a name="l01135"></a><span class="lineno"> 1135</span>  wave image <span class="comment">// prototype</span></div><div class="line"><a name="l01136"></a><span class="lineno"> 1136</span>  wave profile <span class="comment">// destination wave</span></div><div class="line"><a name="l01137"></a><span class="lineno"> 1137</span>  variable dim <span class="comment">// which dimension to keep: 0 = X, 1 = Y</span></div><div class="line"><a name="l01138"></a><span class="lineno"> 1138</span>  </div><div class="line"><a name="l01139"></a><span class="lineno"> 1139</span>  redimension /n=(dimsize(image, dim)) profile</div><div class="line"><a name="l01140"></a><span class="lineno"> 1140</span>  setscale /p x dimoffset(image, dim), dimdelta(image, dim), waveunits(image, dim), profile</div><div class="line"><a name="l01141"></a><span class="lineno"> 1141</span>  setscale d 0, 0, waveunits(image, -1), profile</div><div class="line"><a name="l01142"></a><span class="lineno"> 1142</span>  setdimlabel 0, -1, $getdimlabel(image, dim, -1), profile</div><div class="line"><a name="l01143"></a><span class="lineno"> 1143</span> end</div><div class="line"><a name="l01144"></a><span class="lineno"> 1144</span> </div><div class="line"><a name="l01167"></a><span class="lineno"><a class="line" href="pearl-area-import_8ipf.html#a98804ce23a5c2c314ac243baa0824424"> 1167</a></span> function /s <a class="code" href="pearl-area-import_8ipf.html#a98804ce23a5c2c314ac243baa0824424">adh5_test_reduction_func</a>(source, reduction_func, reduction_param, result_prefix)</div><div class="line"><a name="l01168"></a><span class="lineno"> 1168</span>  wave source</div><div class="line"><a name="l01169"></a><span class="lineno"> 1169</span>  funcref <a class="code" href="pearl-area-import_8ipf.html#ade69cb0f82e0c9cf6082d5fcc29f742f">adh5_default_reduction</a> reduction_func</div><div class="line"><a name="l01170"></a><span class="lineno"> 1170</span>  <span class="keywordtype">string</span> reduction_param</div><div class="line"><a name="l01171"></a><span class="lineno"> 1171</span>  <span class="keywordtype">string</span> result_prefix</div><div class="line"><a name="l01172"></a><span class="lineno"> 1172</span>  </div><div class="line"><a name="l01173"></a><span class="lineno"> 1173</span>  wave /wave results = reduction_func(source, reduction_param)</div><div class="line"><a name="l01174"></a><span class="lineno"> 1174</span>  <a class="code" href="pearl-area-import_8ipf.html#a27a72a3901a5342ca9dea02e3219631c">adh5_get_result_waves</a>(results, result_prefix, 1)</div><div class="line"><a name="l01175"></a><span class="lineno"> 1175</span>  </div><div class="line"><a name="l01176"></a><span class="lineno"> 1176</span>  return reduction_param</div><div class="line"><a name="l01177"></a><span class="lineno"> 1177</span> end</div><div class="line"><a name="l01178"></a><span class="lineno"> 1178</span> </div><div class="line"><a name="l01198"></a><span class="lineno"><a class="line" href="pearl-area-import_8ipf.html#ae88bc41882fd16c94c04d856f3e062e4"> 1198</a></span> function <a class="code" href="pearl-area-import_8ipf.html#ae88bc41882fd16c94c04d856f3e062e4">adh5_reduce_brick</a>(source, reduction_func, reduction_param, result_prefix, [progress, nthreads])</div><div class="line"><a name="l01199"></a><span class="lineno"> 1199</span>  wave source</div><div class="line"><a name="l01200"></a><span class="lineno"> 1200</span>  funcref <a class="code" href="pearl-area-import_8ipf.html#ade69cb0f82e0c9cf6082d5fcc29f742f">adh5_default_reduction</a> reduction_func</div><div class="line"><a name="l01201"></a><span class="lineno"> 1201</span>  <span class="keywordtype">string</span> reduction_param</div><div class="line"><a name="l01202"></a><span class="lineno"> 1202</span>  <span class="keywordtype">string</span> result_prefix</div><div class="line"><a name="l01203"></a><span class="lineno"> 1203</span>  </div><div class="line"><a name="l01204"></a><span class="lineno"> 1204</span>  variable progress</div><div class="line"><a name="l01205"></a><span class="lineno"> 1205</span>  variable nthreads</div><div class="line"><a name="l01206"></a><span class="lineno"> 1206</span>  </div><div class="line"><a name="l01207"></a><span class="lineno"> 1207</span>  if (ParamIsDefault(progress))</div><div class="line"><a name="l01208"></a><span class="lineno"> 1208</span>  progress = 1</div><div class="line"><a name="l01209"></a><span class="lineno"> 1209</span>  endif</div><div class="line"><a name="l01210"></a><span class="lineno"> 1210</span>  if (ParamIsDefault(nthreads))</div><div class="line"><a name="l01211"></a><span class="lineno"> 1211</span>  nthreads = -1</div><div class="line"><a name="l01212"></a><span class="lineno"> 1212</span>  endif</div><div class="line"><a name="l01213"></a><span class="lineno"> 1213</span>  variable result = 0</div><div class="line"><a name="l01214"></a><span class="lineno"> 1214</span>  </div><div class="line"><a name="l01215"></a><span class="lineno"> 1215</span>  <span class="comment">// nx and nz are the image dimensions</span></div><div class="line"><a name="l01216"></a><span class="lineno"> 1216</span>  variable nx, ny, nz, nt</div><div class="line"><a name="l01217"></a><span class="lineno"> 1217</span>  nx = dimsize(source, 0)</div><div class="line"><a name="l01218"></a><span class="lineno"> 1218</span>  ny = dimsize(source, 1)</div><div class="line"><a name="l01219"></a><span class="lineno"> 1219</span>  nz = dimsize(source, 2)</div><div class="line"><a name="l01220"></a><span class="lineno"> 1220</span>  <span class="comment">// force 4th dimension to singleton (ad_extract_slab handles 3 dimensions only)</span></div><div class="line"><a name="l01221"></a><span class="lineno"> 1221</span>  nt = 0</div><div class="line"><a name="l01222"></a><span class="lineno"> 1222</span>  </div><div class="line"><a name="l01223"></a><span class="lineno"> 1223</span>  variable nzt = max(nz, 1) * max(nt, 1)</div><div class="line"><a name="l01224"></a><span class="lineno"> 1224</span>  variable izt</div><div class="line"><a name="l01225"></a><span class="lineno"> 1225</span>  </div><div class="line"><a name="l01226"></a><span class="lineno"> 1226</span>  <span class="comment">// set up multi threading</span></div><div class="line"><a name="l01227"></a><span class="lineno"> 1227</span>  if (nthreads < 0)</div><div class="line"><a name="l01228"></a><span class="lineno"> 1228</span>  nthreads = ThreadProcessorCount</div><div class="line"><a name="l01229"></a><span class="lineno"> 1229</span>  endif</div><div class="line"><a name="l01230"></a><span class="lineno"> 1230</span>  if (nthreads > 0)</div><div class="line"><a name="l01231"></a><span class="lineno"> 1231</span>  variable threadGroupID = ThreadGroupCreate(nthreads)</div><div class="line"><a name="l01232"></a><span class="lineno"> 1232</span>  variable ithread</div><div class="line"><a name="l01233"></a><span class="lineno"> 1233</span>  for (ithread = 0; ithread < nthreads; ithread += 1)</div><div class="line"><a name="l01234"></a><span class="lineno"> 1234</span>  ThreadStart threadGroupID, ithread, <a class="code" href="pearl-area-import_8ipf.html#a33f8faf117450af1d6dae9ef48786cd6">reduce_slab_worker</a>(reduction_func)</div><div class="line"><a name="l01235"></a><span class="lineno"> 1235</span>  endfor</div><div class="line"><a name="l01236"></a><span class="lineno"> 1236</span>  else</div><div class="line"><a name="l01237"></a><span class="lineno"> 1237</span>  make /n=(nzt) /df /free processing_folders</div><div class="line"><a name="l01238"></a><span class="lineno"> 1238</span>  endif</div><div class="line"><a name="l01239"></a><span class="lineno"> 1239</span>  </div><div class="line"><a name="l01240"></a><span class="lineno"> 1240</span>  if (progress)</div><div class="line"><a name="l01241"></a><span class="lineno"> 1241</span>  <a class="code" href="pearl-gui-tools_8ipf.html#aaf29d090c81e00cf44af295193b24c5a">display_progress_panel</a>("data reduction", "extracting data (step 1 of 2)...", nzt)</div><div class="line"><a name="l01242"></a><span class="lineno"> 1242</span>  endif</div><div class="line"><a name="l01243"></a><span class="lineno"> 1243</span>  </div><div class="line"><a name="l01244"></a><span class="lineno"> 1244</span>  variable iz, it</div><div class="line"><a name="l01245"></a><span class="lineno"> 1245</span>  <span class="keywordtype">string</span> dfname</div><div class="line"><a name="l01246"></a><span class="lineno"> 1246</span>  variable iw, nw</div><div class="line"><a name="l01247"></a><span class="lineno"> 1247</span>  <span class="keywordtype">string</span> sw</div><div class="line"><a name="l01248"></a><span class="lineno"> 1248</span>  make /n=0 /free /wave result_waves</div><div class="line"><a name="l01249"></a><span class="lineno"> 1249</span>  </div><div class="line"><a name="l01250"></a><span class="lineno"> 1250</span>  izt = 0</div><div class="line"><a name="l01251"></a><span class="lineno"> 1251</span>  for (iz = 0; iz < max(nz, 1); iz += 1)</div><div class="line"><a name="l01252"></a><span class="lineno"> 1252</span>  for (it = 0; it < max(nt, 1); it += 1)</div><div class="line"><a name="l01253"></a><span class="lineno"> 1253</span>  dfname = "processing_" + num2str(izt)</div><div class="line"><a name="l01254"></a><span class="lineno"> 1254</span>  newdatafolder /s $dfname</div><div class="line"><a name="l01255"></a><span class="lineno"> 1255</span>  <a class="code" href="pearl-area-profiles_8ipf.html#a65bb359c057a9d900c486e186c9974df">ad_extract_slab</a>(source, nan, nan, nan, nan, iz, iz, "image", pscale=1)</div><div class="line"><a name="l01256"></a><span class="lineno"> 1256</span>  wave image</div><div class="line"><a name="l01257"></a><span class="lineno"> 1257</span> </div><div class="line"><a name="l01258"></a><span class="lineno"> 1258</span>  <span class="comment">// send to processing queue</span></div><div class="line"><a name="l01259"></a><span class="lineno"> 1259</span>  variable /g r_index = iz</div><div class="line"><a name="l01260"></a><span class="lineno"> 1260</span>  variable /g s_index = it</div><div class="line"><a name="l01261"></a><span class="lineno"> 1261</span>  <span class="keywordtype">string</span> /g func_param = reduction_param</div><div class="line"><a name="l01262"></a><span class="lineno"> 1262</span> </div><div class="line"><a name="l01263"></a><span class="lineno"> 1263</span>  if (nthreads > 0)</div><div class="line"><a name="l01264"></a><span class="lineno"> 1264</span>  WaveClear image</div><div class="line"><a name="l01265"></a><span class="lineno"> 1265</span>  ThreadGroupPutDF threadGroupID, :</div><div class="line"><a name="l01266"></a><span class="lineno"> 1266</span>  else</div><div class="line"><a name="l01267"></a><span class="lineno"> 1267</span>  processing_folders[izt] = GetDataFolderDFR()</div><div class="line"><a name="l01268"></a><span class="lineno"> 1268</span>  <span class="keywordtype">string</span> param = reduction_param</div><div class="line"><a name="l01269"></a><span class="lineno"> 1269</span>  wave /wave reduced_waves = reduction_func(image, param)</div><div class="line"><a name="l01270"></a><span class="lineno"> 1270</span>  variable /g func_result = numpnts(reduced_waves)</div><div class="line"><a name="l01271"></a><span class="lineno"> 1271</span>  <a class="code" href="pearl-area-import_8ipf.html#a27a72a3901a5342ca9dea02e3219631c">adh5_get_result_waves</a>(reduced_waves, "redw_", 0)</div><div class="line"><a name="l01272"></a><span class="lineno"> 1272</span>  WaveClear image, reduced_waves</div><div class="line"><a name="l01273"></a><span class="lineno"> 1273</span>  setdatafolder ::</div><div class="line"><a name="l01274"></a><span class="lineno"> 1274</span>  endif</div><div class="line"><a name="l01275"></a><span class="lineno"> 1275</span>  </div><div class="line"><a name="l01276"></a><span class="lineno"> 1276</span>  izt += 1</div><div class="line"><a name="l01277"></a><span class="lineno"> 1277</span>  <span class="comment">// progress window</span></div><div class="line"><a name="l01278"></a><span class="lineno"> 1278</span>  if (progress)</div><div class="line"><a name="l01279"></a><span class="lineno"> 1279</span>  if (<a class="code" href="pearl-gui-tools_8ipf.html#a97ad19d83cf0007c4bcf97a32164610f">update_progress_panel</a>(izt))</div><div class="line"><a name="l01280"></a><span class="lineno"> 1280</span>  result = -4 <span class="comment">// user abort</span></div><div class="line"><a name="l01281"></a><span class="lineno"> 1281</span>  break</div><div class="line"><a name="l01282"></a><span class="lineno"> 1282</span>  endif</div><div class="line"><a name="l01283"></a><span class="lineno"> 1283</span>  endif</div><div class="line"><a name="l01284"></a><span class="lineno"> 1284</span>  endfor</div><div class="line"><a name="l01285"></a><span class="lineno"> 1285</span>  endfor</div><div class="line"><a name="l01286"></a><span class="lineno"> 1286</span>  </div><div class="line"><a name="l01287"></a><span class="lineno"> 1287</span>  if (progress)</div><div class="line"><a name="l01288"></a><span class="lineno"> 1288</span>  <a class="code" href="pearl-gui-tools_8ipf.html#a97ad19d83cf0007c4bcf97a32164610f">update_progress_panel</a>(0, message="processing data (step 2 of 2)...")</div><div class="line"><a name="l01289"></a><span class="lineno"> 1289</span>  endif</div><div class="line"><a name="l01290"></a><span class="lineno"> 1290</span> </div><div class="line"><a name="l01291"></a><span class="lineno"> 1291</span>  dfref dfr</div><div class="line"><a name="l01292"></a><span class="lineno"> 1292</span>  for (izt = 0; (izt < nzt) && (result == 0); izt += 1)</div><div class="line"><a name="l01293"></a><span class="lineno"> 1293</span>  if (nthreads > 0)</div><div class="line"><a name="l01294"></a><span class="lineno"> 1294</span>  do</div><div class="line"><a name="l01295"></a><span class="lineno"> 1295</span>  dfr = ThreadGroupGetDFR(threadGroupID, 1000)</div><div class="line"><a name="l01296"></a><span class="lineno"> 1296</span>  if (DatafolderRefStatus(dfr) != 0)</div><div class="line"><a name="l01297"></a><span class="lineno"> 1297</span>  break</div><div class="line"><a name="l01298"></a><span class="lineno"> 1298</span>  endif</div><div class="line"><a name="l01299"></a><span class="lineno"> 1299</span>  if (progress)</div><div class="line"><a name="l01300"></a><span class="lineno"> 1300</span>  if (update_progress_panel(izt))</div><div class="line"><a name="l01301"></a><span class="lineno"> 1301</span>  result = -4 <span class="comment">// user abort</span></div><div class="line"><a name="l01302"></a><span class="lineno"> 1302</span>  break</div><div class="line"><a name="l01303"></a><span class="lineno"> 1303</span>  endif</div><div class="line"><a name="l01304"></a><span class="lineno"> 1304</span>  endif</div><div class="line"><a name="l01305"></a><span class="lineno"> 1305</span>  while (1)</div><div class="line"><a name="l01306"></a><span class="lineno"> 1306</span>  else</div><div class="line"><a name="l01307"></a><span class="lineno"> 1307</span>  dfr = processing_folders[izt]</div><div class="line"><a name="l01308"></a><span class="lineno"> 1308</span>  if (progress)</div><div class="line"><a name="l01309"></a><span class="lineno"> 1309</span>  if (update_progress_panel(izt))</div><div class="line"><a name="l01310"></a><span class="lineno"> 1310</span>  result = -4 <span class="comment">// user abort</span></div><div class="line"><a name="l01311"></a><span class="lineno"> 1311</span>  break</div><div class="line"><a name="l01312"></a><span class="lineno"> 1312</span>  endif</div><div class="line"><a name="l01313"></a><span class="lineno"> 1313</span>  endif</div><div class="line"><a name="l01314"></a><span class="lineno"> 1314</span>  endif</div><div class="line"><a name="l01315"></a><span class="lineno"> 1315</span>  </div><div class="line"><a name="l01316"></a><span class="lineno"> 1316</span>  if (result != 0)</div><div class="line"><a name="l01317"></a><span class="lineno"> 1317</span>  break</div><div class="line"><a name="l01318"></a><span class="lineno"> 1318</span>  endif</div><div class="line"><a name="l01319"></a><span class="lineno"> 1319</span>  </div><div class="line"><a name="l01320"></a><span class="lineno"> 1320</span>  nvar rr = dfr:r_index</div><div class="line"><a name="l01321"></a><span class="lineno"> 1321</span>  nvar ss = dfr:s_index</div><div class="line"><a name="l01322"></a><span class="lineno"> 1322</span>  nvar func_result = dfr:func_result</div><div class="line"><a name="l01323"></a><span class="lineno"> 1323</span> </div><div class="line"><a name="l01324"></a><span class="lineno"> 1324</span>  if (func_result < 1)</div><div class="line"><a name="l01325"></a><span class="lineno"> 1325</span>  result = -3 <span class="comment">// dimension reduction error</span></div><div class="line"><a name="l01326"></a><span class="lineno"> 1326</span>  break</div><div class="line"><a name="l01327"></a><span class="lineno"> 1327</span>  endif</div><div class="line"><a name="l01328"></a><span class="lineno"> 1328</span> </div><div class="line"><a name="l01329"></a><span class="lineno"> 1329</span>  if (numpnts(result_waves) == 0)</div><div class="line"><a name="l01330"></a><span class="lineno"> 1330</span>  redimension /n=(func_result) result_waves</div><div class="line"><a name="l01331"></a><span class="lineno"> 1331</span>  for (iw = 0; iw < func_result; iw += 1)</div><div class="line"><a name="l01332"></a><span class="lineno"> 1332</span>  sw = "redw_" + num2str(iw)</div><div class="line"><a name="l01333"></a><span class="lineno"> 1333</span>  wave profile = dfr:$sw</div><div class="line"><a name="l01334"></a><span class="lineno"> 1334</span>  sw = "ReducedData" + num2str(iw+1)</div><div class="line"><a name="l01335"></a><span class="lineno"> 1335</span>  make /n=(dimsize(profile, 0), nz, nt) /d /o $sw</div><div class="line"><a name="l01336"></a><span class="lineno"> 1336</span>  wave data = $sw</div><div class="line"><a name="l01337"></a><span class="lineno"> 1337</span>  setdimlabel 0, -1, $getdimlabel(profile, 0, -1), data</div><div class="line"><a name="l01338"></a><span class="lineno"> 1338</span>  setscale /p x dimoffset(profile, 0), dimdelta(profile, 0), waveunits(profile, 0), data</div><div class="line"><a name="l01339"></a><span class="lineno"> 1339</span>  setscale /p y dimoffset(source, 2), dimdelta(source, 2), waveunits(source, 2), data</div><div class="line"><a name="l01340"></a><span class="lineno"> 1340</span>  setscale /p z dimoffset(source, 3), dimdelta(source, 3), waveunits(source, 3), data</div><div class="line"><a name="l01341"></a><span class="lineno"> 1341</span>  setscale d 0, 0, waveunits(profile, -1), data</div><div class="line"><a name="l01342"></a><span class="lineno"> 1342</span>  result_waves[iw] = data</div><div class="line"><a name="l01343"></a><span class="lineno"> 1343</span>  endfor</div><div class="line"><a name="l01344"></a><span class="lineno"> 1344</span>  endif</div><div class="line"><a name="l01345"></a><span class="lineno"> 1345</span>  for (iw = 0; iw < func_result; iw += 1)</div><div class="line"><a name="l01346"></a><span class="lineno"> 1346</span>  sw = "redw_" + num2str(iw)</div><div class="line"><a name="l01347"></a><span class="lineno"> 1347</span>  wave profile = dfr:$sw</div><div class="line"><a name="l01348"></a><span class="lineno"> 1348</span>  wave data = result_waves[iw]</div><div class="line"><a name="l01349"></a><span class="lineno"> 1349</span>  data[][rr][ss] = profile[p]</div><div class="line"><a name="l01350"></a><span class="lineno"> 1350</span>  endfor</div><div class="line"><a name="l01351"></a><span class="lineno"> 1351</span>  endfor</div><div class="line"><a name="l01352"></a><span class="lineno"> 1352</span>  </div><div class="line"><a name="l01353"></a><span class="lineno"> 1353</span>  if (nthreads > 0)</div><div class="line"><a name="l01354"></a><span class="lineno"> 1354</span>  variable tstatus = ThreadGroupRelease(threadGroupID)</div><div class="line"><a name="l01355"></a><span class="lineno"> 1355</span>  if (tstatus == -2)</div><div class="line"><a name="l01356"></a><span class="lineno"> 1356</span>  result = -5 <span class="comment">// thread did not terminate properly</span></div><div class="line"><a name="l01357"></a><span class="lineno"> 1357</span>  endif</div><div class="line"><a name="l01358"></a><span class="lineno"> 1358</span>  else</div><div class="line"><a name="l01359"></a><span class="lineno"> 1359</span>  for (izt = 0; izt < nzt; izt += 1)</div><div class="line"><a name="l01360"></a><span class="lineno"> 1360</span>  KillDataFolder /Z processing_folders[izt]</div><div class="line"><a name="l01361"></a><span class="lineno"> 1361</span>  endfor</div><div class="line"><a name="l01362"></a><span class="lineno"> 1362</span>  endif</div><div class="line"><a name="l01363"></a><span class="lineno"> 1363</span>  </div><div class="line"><a name="l01364"></a><span class="lineno"> 1364</span>  if (progress)</div><div class="line"><a name="l01365"></a><span class="lineno"> 1365</span>  <a class="code" href="pearl-gui-tools_8ipf.html#aca0a41a0f28a35ac7535df30ddbd79fe">kill_progress_panel</a>()</div><div class="line"><a name="l01366"></a><span class="lineno"> 1366</span>  endif</div><div class="line"><a name="l01367"></a><span class="lineno"> 1367</span>  </div><div class="line"><a name="l01368"></a><span class="lineno"> 1368</span>  return result</div><div class="line"><a name="l01369"></a><span class="lineno"> 1369</span> end</div><div class="line"><a name="l01370"></a><span class="lineno"> 1370</span> </div><div class="line"><a name="l01377"></a><span class="lineno"><a class="line" href="pearl-area-import_8ipf.html#a4efc9178892310c9e2caf40c61d71bd7"> 1377</a></span> threadsafe static function <a class="code" href="pearl-area-import_8ipf.html#a4efc9178892310c9e2caf40c61d71bd7">reduce_brick_worker</a>(reduction_func)</div><div class="line"><a name="l01378"></a><span class="lineno"> 1378</span>  funcref <a class="code" href="pearl-area-import_8ipf.html#ade69cb0f82e0c9cf6082d5fcc29f742f">adh5_default_reduction</a> reduction_func</div><div class="line"><a name="l01379"></a><span class="lineno"> 1379</span>  do</div><div class="line"><a name="l01380"></a><span class="lineno"> 1380</span>  <span class="comment">// wait for job from main thread</span></div><div class="line"><a name="l01381"></a><span class="lineno"> 1381</span>  do</div><div class="line"><a name="l01382"></a><span class="lineno"> 1382</span>  dfref dfr = ThreadGroupGetDFR(0, 1000)</div><div class="line"><a name="l01383"></a><span class="lineno"> 1383</span>  if (DataFolderRefStatus(dfr) == 0)</div><div class="line"><a name="l01384"></a><span class="lineno"> 1384</span>  if (GetRTError(2))</div><div class="line"><a name="l01385"></a><span class="lineno"> 1385</span>  return 0 <span class="comment">// no more jobs</span></div><div class="line"><a name="l01386"></a><span class="lineno"> 1386</span>  endif</div><div class="line"><a name="l01387"></a><span class="lineno"> 1387</span>  else</div><div class="line"><a name="l01388"></a><span class="lineno"> 1388</span>  break</div><div class="line"><a name="l01389"></a><span class="lineno"> 1389</span>  endif</div><div class="line"><a name="l01390"></a><span class="lineno"> 1390</span>  while (1)</div><div class="line"><a name="l01391"></a><span class="lineno"> 1391</span> </div><div class="line"><a name="l01392"></a><span class="lineno"> 1392</span>  <span class="comment">// get input data</span></div><div class="line"><a name="l01393"></a><span class="lineno"> 1393</span>  wave image = dfr:image</div><div class="line"><a name="l01394"></a><span class="lineno"> 1394</span>  svar func_param = dfr:func_param</div><div class="line"><a name="l01395"></a><span class="lineno"> 1395</span>  nvar rr = dfr:r_index</div><div class="line"><a name="l01396"></a><span class="lineno"> 1396</span>  nvar ss = dfr:s_index</div><div class="line"><a name="l01397"></a><span class="lineno"> 1397</span>  </div><div class="line"><a name="l01398"></a><span class="lineno"> 1398</span>  <span class="comment">// do the work</span></div><div class="line"><a name="l01399"></a><span class="lineno"> 1399</span>  newdatafolder /s outDF</div><div class="line"><a name="l01400"></a><span class="lineno"> 1400</span>  variable /g r_index = rr</div><div class="line"><a name="l01401"></a><span class="lineno"> 1401</span>  variable /g s_index = ss</div><div class="line"><a name="l01402"></a><span class="lineno"> 1402</span>  <span class="keywordtype">string</span> param = func_param</div><div class="line"><a name="l01403"></a><span class="lineno"> 1403</span>  wave /wave reduced_waves = reduction_func(image, param)</div><div class="line"><a name="l01404"></a><span class="lineno"> 1404</span>  variable /g func_result = numpnts(reduced_waves)</div><div class="line"><a name="l01405"></a><span class="lineno"> 1405</span> </div><div class="line"><a name="l01406"></a><span class="lineno"> 1406</span>  <span class="comment">// send output to queue and clean up</span></div><div class="line"><a name="l01407"></a><span class="lineno"> 1407</span>  <a class="code" href="pearl-area-import_8ipf.html#a27a72a3901a5342ca9dea02e3219631c">adh5_get_result_waves</a>(reduced_waves, "redw_", 0)</div><div class="line"><a name="l01408"></a><span class="lineno"> 1408</span>  WaveClear image, reduced_waves</div><div class="line"><a name="l01409"></a><span class="lineno"> 1409</span>  ThreadGroupPutDF 0, :</div><div class="line"><a name="l01410"></a><span class="lineno"> 1410</span>  KillDataFolder dfr</div><div class="line"><a name="l01411"></a><span class="lineno"> 1411</span>  while (1)</div><div class="line"><a name="l01412"></a><span class="lineno"> 1412</span>  </div><div class="line"><a name="l01413"></a><span class="lineno"> 1413</span>  return 0</div><div class="line"><a name="l01414"></a><span class="lineno"> 1414</span> end</div><div class="line"><a name="l01415"></a><span class="lineno"> 1415</span> </div><div class="line"><a name="l01430"></a><span class="lineno"><a class="line" href="pearl-area-import_8ipf.html#a27a72a3901a5342ca9dea02e3219631c"> 1430</a></span> threadsafe function <a class="code" href="pearl-area-import_8ipf.html#a27a72a3901a5342ca9dea02e3219631c">adh5_get_result_waves</a>(results, result_prefix, start_index)</div><div class="line"><a name="l01431"></a><span class="lineno"> 1431</span>  wave /wave results</div><div class="line"><a name="l01432"></a><span class="lineno"> 1432</span>  <span class="keywordtype">string</span> result_prefix</div><div class="line"><a name="l01433"></a><span class="lineno"> 1433</span>  variable start_index</div><div class="line"><a name="l01434"></a><span class="lineno"> 1434</span>  </div><div class="line"><a name="l01435"></a><span class="lineno"> 1435</span>  variable nw = numpnts(results)</div><div class="line"><a name="l01436"></a><span class="lineno"> 1436</span>  variable iw</div><div class="line"><a name="l01437"></a><span class="lineno"> 1437</span>  <span class="keywordtype">string</span> sw</div><div class="line"><a name="l01438"></a><span class="lineno"> 1438</span>  for (iw = 0; iw < nw; iw += 1)</div><div class="line"><a name="l01439"></a><span class="lineno"> 1439</span>  sw = result_prefix + num2str(iw + start_index)</div><div class="line"><a name="l01440"></a><span class="lineno"> 1440</span>  duplicate /o results[iw], $sw</div><div class="line"><a name="l01441"></a><span class="lineno"> 1441</span>  endfor</div><div class="line"><a name="l01442"></a><span class="lineno"> 1442</span> end</div><div class="line"><a name="l01443"></a><span class="lineno"> 1443</span> </div><div class="line"><a name="l01466"></a><span class="lineno"><a class="line" href="pearl-area-import_8ipf.html#a3f2ac36f961941e46e80a775de8300e5"> 1466</a></span> function <a class="code" href="pearl-area-import_8ipf.html#a3f2ac36f961941e46e80a775de8300e5">adh5_load_reduced_detector</a>(fileID, detectorpath, reduction_func, reduction_param, [progress, nthreads])</div><div class="line"><a name="l01467"></a><span class="lineno"> 1467</span>  variable fileID</div><div class="line"><a name="l01468"></a><span class="lineno"> 1468</span>  <span class="keywordtype">string</span> detectorpath</div><div class="line"><a name="l01469"></a><span class="lineno"> 1469</span>  funcref <a class="code" href="pearl-area-import_8ipf.html#ade69cb0f82e0c9cf6082d5fcc29f742f">adh5_default_reduction</a> reduction_func</div><div class="line"><a name="l01470"></a><span class="lineno"> 1470</span>  <span class="keywordtype">string</span> reduction_param</div><div class="line"><a name="l01471"></a><span class="lineno"> 1471</span>  variable progress</div><div class="line"><a name="l01472"></a><span class="lineno"> 1472</span>  variable nthreads</div><div class="line"><a name="l01473"></a><span class="lineno"> 1473</span>  </div><div class="line"><a name="l01474"></a><span class="lineno"> 1474</span>  if (ParamIsDefault(progress))</div><div class="line"><a name="l01475"></a><span class="lineno"> 1475</span>  progress = 1</div><div class="line"><a name="l01476"></a><span class="lineno"> 1476</span>  endif</div><div class="line"><a name="l01477"></a><span class="lineno"> 1477</span>  if (ParamIsDefault(nthreads))</div><div class="line"><a name="l01478"></a><span class="lineno"> 1478</span>  nthreads = -1</div><div class="line"><a name="l01479"></a><span class="lineno"> 1479</span>  endif</div><div class="line"><a name="l01480"></a><span class="lineno"> 1480</span>  variable result = 0</div><div class="line"><a name="l01481"></a><span class="lineno"> 1481</span>  </div><div class="line"><a name="l01482"></a><span class="lineno"> 1482</span>  <span class="comment">// avoid compilation error if HDF5 XOP has not been loaded</span></div><div class="line"><a name="l01483"></a><span class="lineno"> 1483</span>  <span class="preprocessor">#if Exists("HDF5LoadData")</span></div><div class="line"><a name="l01484"></a><span class="lineno"> 1484</span>  <span class="keywordtype">string</span> datasetname</div><div class="line"><a name="l01485"></a><span class="lineno"> 1485</span>  <span class="keywordtype">string</span> datawavename</div><div class="line"><a name="l01486"></a><span class="lineno"> 1486</span>  </div><div class="line"><a name="l01487"></a><span class="lineno"> 1487</span>  <span class="comment">// detector data</span></div><div class="line"><a name="l01488"></a><span class="lineno"> 1488</span>  datasetname = detectorpath + <span class="stringliteral">"data"</span></div><div class="line"><a name="l01489"></a><span class="lineno"> 1489</span>  STRUCT HDF5DataInfo di <span class="comment">// Defined in HDF5 Browser.ipf.</span></div><div class="line"><a name="l01490"></a><span class="lineno"> 1490</span>  InitHDF5DataInfo(di)</div><div class="line"><a name="l01491"></a><span class="lineno"> 1491</span>  variable err = HDF5DatasetInfo(fileID, datasetname, 0, di)</div><div class="line"><a name="l01492"></a><span class="lineno"> 1492</span>  <span class="keywordflow">if</span> (err != 0)</div><div class="line"><a name="l01493"></a><span class="lineno"> 1493</span>  print <span class="stringliteral">"error accessing detector/data"</span></div><div class="line"><a name="l01494"></a><span class="lineno"> 1494</span>  <span class="keywordflow">return</span> -1</div><div class="line"><a name="l01495"></a><span class="lineno"> 1495</span>  endif</div><div class="line"><a name="l01496"></a><span class="lineno"> 1496</span>  <span class="keywordflow">if</span> (di.ndims < 2)</div><div class="line"><a name="l01497"></a><span class="lineno"> 1497</span>  print <span class="stringliteral">"error: rank of dataset < 2"</span></div><div class="line"><a name="l01498"></a><span class="lineno"> 1498</span>  <span class="keywordflow">return</span> -2</div><div class="line"><a name="l01499"></a><span class="lineno"> 1499</span>  endif</div><div class="line"><a name="l01500"></a><span class="lineno"> 1500</span>  </div><div class="line"><a name="l01501"></a><span class="lineno"> 1501</span>  <span class="comment">// nx and nz are the image dimensions</span></div><div class="line"><a name="l01502"></a><span class="lineno"> 1502</span>  variable idx, idy, idz, idt</div><div class="line"><a name="l01503"></a><span class="lineno"> 1503</span>  idx = di.ndims - 1</div><div class="line"><a name="l01504"></a><span class="lineno"> 1504</span>  idy = di.ndims - 2</div><div class="line"><a name="l01505"></a><span class="lineno"> 1505</span>  idz = -1</div><div class="line"><a name="l01506"></a><span class="lineno"> 1506</span>  idt = -1</div><div class="line"><a name="l01507"></a><span class="lineno"> 1507</span>  </div><div class="line"><a name="l01508"></a><span class="lineno"> 1508</span>  variable nx, ny, nz, nt</div><div class="line"><a name="l01509"></a><span class="lineno"> 1509</span>  nx = di.dims[idx]</div><div class="line"><a name="l01510"></a><span class="lineno"> 1510</span>  ny = di.dims[idy]</div><div class="line"><a name="l01511"></a><span class="lineno"> 1511</span>  nz = 1</div><div class="line"><a name="l01512"></a><span class="lineno"> 1512</span>  nt = 1</div><div class="line"><a name="l01513"></a><span class="lineno"> 1513</span>  </div><div class="line"><a name="l01514"></a><span class="lineno"> 1514</span>  <span class="comment">// find additional dimensions, ignore singletons</span></div><div class="line"><a name="l01515"></a><span class="lineno"> 1515</span>  variable <span class="keywordtype">id</span></div><div class="line"><a name="l01516"></a><span class="lineno"> 1516</span>  <span class="keywordflow">for</span> (<span class="keywordtype">id</span> = idy - 1; (<span class="keywordtype">id</span> >= 0) && (nz == 1); <span class="keywordtype">id</span> -= 1)</div><div class="line"><a name="l01517"></a><span class="lineno"> 1517</span>  <span class="keywordflow">if</span> (di.dims[<span class="keywordtype">id</span>] > 1)</div><div class="line"><a name="l01518"></a><span class="lineno"> 1518</span>  idz = <span class="keywordtype">id</span></div><div class="line"><a name="l01519"></a><span class="lineno"> 1519</span>  nz = di.dims[id]</div><div class="line"><a name="l01520"></a><span class="lineno"> 1520</span>  endif</div><div class="line"><a name="l01521"></a><span class="lineno"> 1521</span>  endfor</div><div class="line"><a name="l01522"></a><span class="lineno"> 1522</span>  <span class="keywordflow">for</span> (<span class="keywordtype">id</span> = idz - 1; (<span class="keywordtype">id</span> >= 0) && (nt == 1); <span class="keywordtype">id</span> -= 1)</div><div class="line"><a name="l01523"></a><span class="lineno"> 1523</span>  <span class="keywordflow">if</span> (di.dims[<span class="keywordtype">id</span>] > 1)</div><div class="line"><a name="l01524"></a><span class="lineno"> 1524</span>  idt = <span class="keywordtype">id</span></div><div class="line"><a name="l01525"></a><span class="lineno"> 1525</span>  nt = di.dims[id]</div><div class="line"><a name="l01526"></a><span class="lineno"> 1526</span>  endif</div><div class="line"><a name="l01527"></a><span class="lineno"> 1527</span>  endfor</div><div class="line"><a name="l01528"></a><span class="lineno"> 1528</span>  <span class="comment">// default values if dimensions are not present in dataset</span></div><div class="line"><a name="l01529"></a><span class="lineno"> 1529</span>  <span class="keywordflow">if</span> (idz < 0)</div><div class="line"><a name="l01530"></a><span class="lineno"> 1530</span>  idz = idx + 1</div><div class="line"><a name="l01531"></a><span class="lineno"> 1531</span>  idt = idz + 1</div><div class="line"><a name="l01532"></a><span class="lineno"> 1532</span>  elseif (idt < 0)</div><div class="line"><a name="l01533"></a><span class="lineno"> 1533</span>  idt = idx + 1</div><div class="line"><a name="l01534"></a><span class="lineno"> 1534</span>  endif</div><div class="line"><a name="l01535"></a><span class="lineno"> 1535</span>  variable nzt = nz * nt</div><div class="line"><a name="l01536"></a><span class="lineno"> 1536</span>  variable izt</div><div class="line"><a name="l01537"></a><span class="lineno"> 1537</span>  </div><div class="line"><a name="l01538"></a><span class="lineno"> 1538</span>  <span class="comment">// load data image by image</span></div><div class="line"><a name="l01539"></a><span class="lineno"> 1539</span>  HDF5MakeHyperslabWave(GetDataFolder(1) + "slab", max(di.ndims, 4))</div><div class="line"><a name="l01540"></a><span class="lineno"> 1540</span>  wave slab</div><div class="line"><a name="l01541"></a><span class="lineno"> 1541</span>  slab[][%Start] = 0</div><div class="line"><a name="l01542"></a><span class="lineno"> 1542</span>  slab[][%Stride] = 1</div><div class="line"><a name="l01543"></a><span class="lineno"> 1543</span>  slab[][%Count] = 1</div><div class="line"><a name="l01544"></a><span class="lineno"> 1544</span>  slab[][%Block] = 1</div><div class="line"><a name="l01545"></a><span class="lineno"> 1545</span>  slab[idx][%Block] = nx</div><div class="line"><a name="l01546"></a><span class="lineno"> 1546</span>  slab[idy][%Block] = ny</div><div class="line"><a name="l01547"></a><span class="lineno"> 1547</span>  </div><div class="line"><a name="l01548"></a><span class="lineno"> 1548</span>  <span class="comment">// set up multi threading</span></div><div class="line"><a name="l01549"></a><span class="lineno"> 1549</span>  if (nthreads < 0)</div><div class="line"><a name="l01550"></a><span class="lineno"> 1550</span>  nthreads = ThreadProcessorCount</div><div class="line"><a name="l01551"></a><span class="lineno"> 1551</span>  endif</div><div class="line"><a name="l01552"></a><span class="lineno"> 1552</span>  if (nthreads > 0)</div><div class="line"><a name="l01553"></a><span class="lineno"> 1553</span>  variable threadGroupID = ThreadGroupCreate(nthreads)</div><div class="line"><a name="l01554"></a><span class="lineno"> 1554</span>  variable ithread</div><div class="line"><a name="l01555"></a><span class="lineno"> 1555</span>  for (ithread = 0; ithread < nthreads; ithread += 1)</div><div class="line"><a name="l01556"></a><span class="lineno"> 1556</span>  ThreadStart threadGroupID, ithread, <a class="code" href="pearl-area-import_8ipf.html#a33f8faf117450af1d6dae9ef48786cd6">reduce_slab_worker</a>(reduction_func)</div><div class="line"><a name="l01557"></a><span class="lineno"> 1557</span>  endfor</div><div class="line"><a name="l01558"></a><span class="lineno"> 1558</span>  else</div><div class="line"><a name="l01559"></a><span class="lineno"> 1559</span>  make /n=(nzt) /df /free processing_folders</div><div class="line"><a name="l01560"></a><span class="lineno"> 1560</span>  endif</div><div class="line"><a name="l01561"></a><span class="lineno"> 1561</span>  </div><div class="line"><a name="l01562"></a><span class="lineno"> 1562</span>  if (progress)</div><div class="line"><a name="l01563"></a><span class="lineno"> 1563</span>  <a class="code" href="pearl-gui-tools_8ipf.html#aaf29d090c81e00cf44af295193b24c5a">display_progress_panel</a>("HDF5 Import", "Loading data (step 1 of 2)...", nzt)</div><div class="line"><a name="l01564"></a><span class="lineno"> 1564</span>  endif</div><div class="line"><a name="l01565"></a><span class="lineno"> 1565</span>  </div><div class="line"><a name="l01566"></a><span class="lineno"> 1566</span>  make /n=(nx,ny)/d image_template</div><div class="line"><a name="l01567"></a><span class="lineno"> 1567</span>  setdimlabel 0, -1, AD_Dim0, image_template</div><div class="line"><a name="l01568"></a><span class="lineno"> 1568</span>  setdimlabel 1, -1, AD_Dim1, image_template</div><div class="line"><a name="l01569"></a><span class="lineno"> 1569</span>  <a class="code" href="pearl-area-import_8ipf.html#a774751d1857ea6946a942448dc913128">adh5_scale</a>(image_template)</div><div class="line"><a name="l01570"></a><span class="lineno"> 1570</span> </div><div class="line"><a name="l01571"></a><span class="lineno"> 1571</span>  variable iz, it</div><div class="line"><a name="l01572"></a><span class="lineno"> 1572</span>  <span class="keywordtype">string</span> dfname</div><div class="line"><a name="l01573"></a><span class="lineno"> 1573</span>  variable iw, nw</div><div class="line"><a name="l01574"></a><span class="lineno"> 1574</span>  <span class="keywordtype">string</span> sw</div><div class="line"><a name="l01575"></a><span class="lineno"> 1575</span>  make /n=0 /free /wave result_waves</div><div class="line"><a name="l01576"></a><span class="lineno"> 1576</span>  </div><div class="line"><a name="l01577"></a><span class="lineno"> 1577</span>  izt = 0</div><div class="line"><a name="l01578"></a><span class="lineno"> 1578</span>  for (iz = 0; iz < nz; iz += 1)</div><div class="line"><a name="l01579"></a><span class="lineno"> 1579</span>  for (it = 0; it < nt; it += 1)</div><div class="line"><a name="l01580"></a><span class="lineno"> 1580</span>  <span class="comment">// load hyperslab</span></div><div class="line"><a name="l01581"></a><span class="lineno"> 1581</span>  slab[idz][%Start] = iz</div><div class="line"><a name="l01582"></a><span class="lineno"> 1582</span>  slab[idt][%Start] = it</div><div class="line"><a name="l01583"></a><span class="lineno"> 1583</span>  dfname = "processing_" + num2str(izt)</div><div class="line"><a name="l01584"></a><span class="lineno"> 1584</span>  newdatafolder /s $dfname</div><div class="line"><a name="l01585"></a><span class="lineno"> 1585</span>  HDF5LoadData /O /Q /Z /SLAB=slab /N=slabdata fileID, datasetname</div><div class="line"><a name="l01586"></a><span class="lineno"> 1586</span> </div><div class="line"><a name="l01587"></a><span class="lineno"> 1587</span>  <span class="comment">// send to processing queue</span></div><div class="line"><a name="l01588"></a><span class="lineno"> 1588</span>  duplicate image_template, image</div><div class="line"><a name="l01589"></a><span class="lineno"> 1589</span>  variable /g r_index = iz</div><div class="line"><a name="l01590"></a><span class="lineno"> 1590</span>  variable /g s_index = it</div><div class="line"><a name="l01591"></a><span class="lineno"> 1591</span>  <span class="keywordtype">string</span> /g func_param = reduction_param</div><div class="line"><a name="l01592"></a><span class="lineno"> 1592</span> </div><div class="line"><a name="l01593"></a><span class="lineno"> 1593</span>  if (nthreads > 0)</div><div class="line"><a name="l01594"></a><span class="lineno"> 1594</span>  WaveClear image</div><div class="line"><a name="l01595"></a><span class="lineno"> 1595</span>  ThreadGroupPutDF threadGroupID, :</div><div class="line"><a name="l01596"></a><span class="lineno"> 1596</span>  else</div><div class="line"><a name="l01597"></a><span class="lineno"> 1597</span>  processing_folders[izt] = GetDataFolderDFR()</div><div class="line"><a name="l01598"></a><span class="lineno"> 1598</span>  wave slabdata</div><div class="line"><a name="l01599"></a><span class="lineno"> 1599</span>  wave /wave reduced_waves = <a class="code" href="pearl-area-import_8ipf.html#a44d495fba0dd2b82dec13760a07fd226">reduce_slab_image</a>(slabdata, image, reduction_func, func_param)</div><div class="line"><a name="l01600"></a><span class="lineno"> 1600</span>  variable /g func_result = numpnts(reduced_waves)</div><div class="line"><a name="l01601"></a><span class="lineno"> 1601</span>  <a class="code" href="pearl-area-import_8ipf.html#a27a72a3901a5342ca9dea02e3219631c">adh5_get_result_waves</a>(reduced_waves, "redw_", 0)</div><div class="line"><a name="l01602"></a><span class="lineno"> 1602</span>  WaveClear slabdata, image, reduced_waves</div><div class="line"><a name="l01603"></a><span class="lineno"> 1603</span>  setdatafolder ::</div><div class="line"><a name="l01604"></a><span class="lineno"> 1604</span>  endif</div><div class="line"><a name="l01605"></a><span class="lineno"> 1605</span>  </div><div class="line"><a name="l01606"></a><span class="lineno"> 1606</span>  izt += 1</div><div class="line"><a name="l01607"></a><span class="lineno"> 1607</span>  <span class="comment">// progress window</span></div><div class="line"><a name="l01608"></a><span class="lineno"> 1608</span>  if (progress)</div><div class="line"><a name="l01609"></a><span class="lineno"> 1609</span>  if (update_progress_panel(izt))</div><div class="line"><a name="l01610"></a><span class="lineno"> 1610</span>  result = -4 <span class="comment">// user abort</span></div><div class="line"><a name="l01611"></a><span class="lineno"> 1611</span>  break</div><div class="line"><a name="l01612"></a><span class="lineno"> 1612</span>  endif</div><div class="line"><a name="l01613"></a><span class="lineno"> 1613</span>  endif</div><div class="line"><a name="l01614"></a><span class="lineno"> 1614</span>  endfor</div><div class="line"><a name="l01615"></a><span class="lineno"> 1615</span>  endfor</div><div class="line"><a name="l01616"></a><span class="lineno"> 1616</span>  </div><div class="line"><a name="l01617"></a><span class="lineno"> 1617</span>  killwaves /z slab, image_template</div><div class="line"><a name="l01618"></a><span class="lineno"> 1618</span>  if (progress)</div><div class="line"><a name="l01619"></a><span class="lineno"> 1619</span>  update_progress_panel(0, message="Processing data (step 2 of 2)...")</div><div class="line"><a name="l01620"></a><span class="lineno"> 1620</span>  endif</div><div class="line"><a name="l01621"></a><span class="lineno"> 1621</span> </div><div class="line"><a name="l01622"></a><span class="lineno"> 1622</span>  dfref dfr</div><div class="line"><a name="l01623"></a><span class="lineno"> 1623</span>  for (izt = 0; (izt < nzt) && (result == 0); izt += 1)</div><div class="line"><a name="l01624"></a><span class="lineno"> 1624</span>  if (nthreads > 0)</div><div class="line"><a name="l01625"></a><span class="lineno"> 1625</span>  do</div><div class="line"><a name="l01626"></a><span class="lineno"> 1626</span>  dfr = ThreadGroupGetDFR(threadGroupID, 1000)</div><div class="line"><a name="l01627"></a><span class="lineno"> 1627</span>  if (DatafolderRefStatus(dfr) != 0)</div><div class="line"><a name="l01628"></a><span class="lineno"> 1628</span>  break</div><div class="line"><a name="l01629"></a><span class="lineno"> 1629</span>  endif</div><div class="line"><a name="l01630"></a><span class="lineno"> 1630</span>  if (progress)</div><div class="line"><a name="l01631"></a><span class="lineno"> 1631</span>  if (update_progress_panel(izt))</div><div class="line"><a name="l01632"></a><span class="lineno"> 1632</span>  result = -4 <span class="comment">// user abort</span></div><div class="line"><a name="l01633"></a><span class="lineno"> 1633</span>  break</div><div class="line"><a name="l01634"></a><span class="lineno"> 1634</span>  endif</div><div class="line"><a name="l01635"></a><span class="lineno"> 1635</span>  endif</div><div class="line"><a name="l01636"></a><span class="lineno"> 1636</span>  while (1)</div><div class="line"><a name="l01637"></a><span class="lineno"> 1637</span>  else</div><div class="line"><a name="l01638"></a><span class="lineno"> 1638</span>  dfr = processing_folders[izt]</div><div class="line"><a name="l01639"></a><span class="lineno"> 1639</span>  if (progress)</div><div class="line"><a name="l01640"></a><span class="lineno"> 1640</span>  if (update_progress_panel(izt))</div><div class="line"><a name="l01641"></a><span class="lineno"> 1641</span>  result = -4 <span class="comment">// user abort</span></div><div class="line"><a name="l01642"></a><span class="lineno"> 1642</span>  break</div><div class="line"><a name="l01643"></a><span class="lineno"> 1643</span>  endif</div><div class="line"><a name="l01644"></a><span class="lineno"> 1644</span>  endif</div><div class="line"><a name="l01645"></a><span class="lineno"> 1645</span>  endif</div><div class="line"><a name="l01646"></a><span class="lineno"> 1646</span>  </div><div class="line"><a name="l01647"></a><span class="lineno"> 1647</span>  if (result != 0)</div><div class="line"><a name="l01648"></a><span class="lineno"> 1648</span>  break</div><div class="line"><a name="l01649"></a><span class="lineno"> 1649</span>  endif</div><div class="line"><a name="l01650"></a><span class="lineno"> 1650</span>  </div><div class="line"><a name="l01651"></a><span class="lineno"> 1651</span>  nvar rr = dfr:r_index</div><div class="line"><a name="l01652"></a><span class="lineno"> 1652</span>  nvar ss = dfr:s_index</div><div class="line"><a name="l01653"></a><span class="lineno"> 1653</span>  nvar func_result = dfr:func_result</div><div class="line"><a name="l01654"></a><span class="lineno"> 1654</span> </div><div class="line"><a name="l01655"></a><span class="lineno"> 1655</span>  if (func_result < 1)</div><div class="line"><a name="l01656"></a><span class="lineno"> 1656</span>  result = -3 <span class="comment">// dimension reduction error</span></div><div class="line"><a name="l01657"></a><span class="lineno"> 1657</span>  break</div><div class="line"><a name="l01658"></a><span class="lineno"> 1658</span>  endif</div><div class="line"><a name="l01659"></a><span class="lineno"> 1659</span> </div><div class="line"><a name="l01660"></a><span class="lineno"> 1660</span>  if (numpnts(result_waves) == 0)</div><div class="line"><a name="l01661"></a><span class="lineno"> 1661</span>  redimension /n=(func_result) result_waves</div><div class="line"><a name="l01662"></a><span class="lineno"> 1662</span>  for (iw = 0; iw < func_result; iw += 1)</div><div class="line"><a name="l01663"></a><span class="lineno"> 1663</span>  sw = "redw_" + num2str(iw)</div><div class="line"><a name="l01664"></a><span class="lineno"> 1664</span>  wave profile = dfr:$sw</div><div class="line"><a name="l01665"></a><span class="lineno"> 1665</span>  sw = "ReducedData" + num2str(iw+1)</div><div class="line"><a name="l01666"></a><span class="lineno"> 1666</span>  make /n=(dimsize(profile, 0), nz, nt) /d /o $sw</div><div class="line"><a name="l01667"></a><span class="lineno"> 1667</span>  wave data = $sw</div><div class="line"><a name="l01668"></a><span class="lineno"> 1668</span>  setdimlabel 0, -1, $getdimlabel(profile, 0, -1), data</div><div class="line"><a name="l01669"></a><span class="lineno"> 1669</span>  setscale /p x dimoffset(profile, 0), dimdelta(profile, 0), waveunits(profile, 0), data</div><div class="line"><a name="l01670"></a><span class="lineno"> 1670</span>  setscale d 0, 0, waveunits(profile, -1), data</div><div class="line"><a name="l01671"></a><span class="lineno"> 1671</span>  result_waves[iw] = data</div><div class="line"><a name="l01672"></a><span class="lineno"> 1672</span>  endfor</div><div class="line"><a name="l01673"></a><span class="lineno"> 1673</span>  endif</div><div class="line"><a name="l01674"></a><span class="lineno"> 1674</span>  for (iw = 0; iw < func_result; iw += 1)</div><div class="line"><a name="l01675"></a><span class="lineno"> 1675</span>  sw = "redw_" + num2str(iw)</div><div class="line"><a name="l01676"></a><span class="lineno"> 1676</span>  wave profile = dfr:$sw</div><div class="line"><a name="l01677"></a><span class="lineno"> 1677</span>  wave data = result_waves[iw]</div><div class="line"><a name="l01678"></a><span class="lineno"> 1678</span>  data[][rr][ss] = profile[p]</div><div class="line"><a name="l01679"></a><span class="lineno"> 1679</span>  endfor</div><div class="line"><a name="l01680"></a><span class="lineno"> 1680</span>  endfor</div><div class="line"><a name="l01681"></a><span class="lineno"> 1681</span>  </div><div class="line"><a name="l01682"></a><span class="lineno"> 1682</span>  if (nthreads > 0)</div><div class="line"><a name="l01683"></a><span class="lineno"> 1683</span>  variable tstatus = ThreadGroupRelease(threadGroupID)</div><div class="line"><a name="l01684"></a><span class="lineno"> 1684</span>  if (tstatus == -2)</div><div class="line"><a name="l01685"></a><span class="lineno"> 1685</span>  result = -5 <span class="comment">// thread did not terminate properly</span></div><div class="line"><a name="l01686"></a><span class="lineno"> 1686</span>  endif</div><div class="line"><a name="l01687"></a><span class="lineno"> 1687</span>  else</div><div class="line"><a name="l01688"></a><span class="lineno"> 1688</span>  for (izt = 0; izt < nzt; izt += 1)</div><div class="line"><a name="l01689"></a><span class="lineno"> 1689</span>  KillDataFolder /Z processing_folders[izt]</div><div class="line"><a name="l01690"></a><span class="lineno"> 1690</span>  endfor</div><div class="line"><a name="l01691"></a><span class="lineno"> 1691</span>  endif</div><div class="line"><a name="l01692"></a><span class="lineno"> 1692</span>  </div><div class="line"><a name="l01693"></a><span class="lineno"> 1693</span>  if (result == 0)</div><div class="line"><a name="l01694"></a><span class="lineno"> 1694</span>  nw = numpnts(result_waves)</div><div class="line"><a name="l01695"></a><span class="lineno"> 1695</span>  for (iw = 0; iw < nw; iw += 1)</div><div class="line"><a name="l01696"></a><span class="lineno"> 1696</span>  wave data = result_waves[iw]</div><div class="line"><a name="l01697"></a><span class="lineno"> 1697</span>  if (nz == 1)</div><div class="line"><a name="l01698"></a><span class="lineno"> 1698</span>  redimension /n=(dimsize(data, 0)) data</div><div class="line"><a name="l01699"></a><span class="lineno"> 1699</span>  elseif (nt == 1)</div><div class="line"><a name="l01700"></a><span class="lineno"> 1700</span>  redimension /n=(dimsize(data, 0),nz) data</div><div class="line"><a name="l01701"></a><span class="lineno"> 1701</span>  setdimlabel 1, -1, AD_DimN, data</div><div class="line"><a name="l01702"></a><span class="lineno"> 1702</span>  else</div><div class="line"><a name="l01703"></a><span class="lineno"> 1703</span>  setdimlabel 1, -1, AD_DimN, data</div><div class="line"><a name="l01704"></a><span class="lineno"> 1704</span>  setdimlabel 2, -1, AD_DimX, data</div><div class="line"><a name="l01705"></a><span class="lineno"> 1705</span>  endif</div><div class="line"><a name="l01706"></a><span class="lineno"> 1706</span>  endfor</div><div class="line"><a name="l01707"></a><span class="lineno"> 1707</span>  endif</div><div class="line"><a name="l01708"></a><span class="lineno"> 1708</span>  if (progress)</div><div class="line"><a name="l01709"></a><span class="lineno"> 1709</span>  <a class="code" href="pearl-gui-tools_8ipf.html#aca0a41a0f28a35ac7535df30ddbd79fe">kill_progress_panel</a>()</div><div class="line"><a name="l01710"></a><span class="lineno"> 1710</span>  endif</div><div class="line"><a name="l01711"></a><span class="lineno"> 1711</span>  </div><div class="line"><a name="l01712"></a><span class="lineno"> 1712</span>  <span class="preprocessor">#else</span></div><div class="line"><a name="l01713"></a><span class="lineno"> 1713</span>  Abort <span class="stringliteral">"HDF5 XOP not loaded."</span></div><div class="line"><a name="l01714"></a><span class="lineno"> 1714</span> <span class="preprocessor"> #endif</span></div><div class="line"><a name="l01715"></a><span class="lineno"> 1715</span>  <span class="keywordflow">return</span> result</div><div class="line"><a name="l01716"></a><span class="lineno"> 1716</span> end</div><div class="line"><a name="l01717"></a><span class="lineno"> 1717</span> </div><div class="line"><a name="l01718"></a><span class="lineno"><a class="line" href="pearl-area-import_8ipf.html#a33f8faf117450af1d6dae9ef48786cd6"> 1718</a></span> threadsafe <span class="keyword">static</span> <span class="keyword">function</span> <a class="code" href="pearl-area-import_8ipf.html#a33f8faf117450af1d6dae9ef48786cd6">reduce_slab_worker</a>(reduction_func)</div><div class="line"><a name="l01719"></a><span class="lineno"> 1719</span>  funcref <a class="code" href="pearl-area-import_8ipf.html#ade69cb0f82e0c9cf6082d5fcc29f742f">adh5_default_reduction</a> reduction_func</div><div class="line"><a name="l01720"></a><span class="lineno"> 1720</span>  <span class="keywordflow">do</span></div><div class="line"><a name="l01721"></a><span class="lineno"> 1721</span>  <span class="comment">// wait for job from main thread</span></div><div class="line"><a name="l01722"></a><span class="lineno"> 1722</span>  <span class="keywordflow">do</span></div><div class="line"><a name="l01723"></a><span class="lineno"> 1723</span>  dfref dfr = ThreadGroupGetDFR(0, 1000)</div><div class="line"><a name="l01724"></a><span class="lineno"> 1724</span>  if (DataFolderRefStatus(dfr) == 0)</div><div class="line"><a name="l01725"></a><span class="lineno"> 1725</span>  if (GetRTError(2))</div><div class="line"><a name="l01726"></a><span class="lineno"> 1726</span>  return 0 <span class="comment">// no more jobs</span></div><div class="line"><a name="l01727"></a><span class="lineno"> 1727</span>  endif</div><div class="line"><a name="l01728"></a><span class="lineno"> 1728</span>  else</div><div class="line"><a name="l01729"></a><span class="lineno"> 1729</span>  break</div><div class="line"><a name="l01730"></a><span class="lineno"> 1730</span>  endif</div><div class="line"><a name="l01731"></a><span class="lineno"> 1731</span>  while (1)</div><div class="line"><a name="l01732"></a><span class="lineno"> 1732</span> </div><div class="line"><a name="l01733"></a><span class="lineno"> 1733</span>  <span class="comment">// get input data</span></div><div class="line"><a name="l01734"></a><span class="lineno"> 1734</span>  wave slabdata = dfr:slabdata</div><div class="line"><a name="l01735"></a><span class="lineno"> 1735</span>  wave image = dfr:image</div><div class="line"><a name="l01736"></a><span class="lineno"> 1736</span>  svar func_param = dfr:func_param</div><div class="line"><a name="l01737"></a><span class="lineno"> 1737</span>  nvar rr = dfr:r_index</div><div class="line"><a name="l01738"></a><span class="lineno"> 1738</span>  nvar ss = dfr:s_index</div><div class="line"><a name="l01739"></a><span class="lineno"> 1739</span>  </div><div class="line"><a name="l01740"></a><span class="lineno"> 1740</span>  <span class="comment">// do the work</span></div><div class="line"><a name="l01741"></a><span class="lineno"> 1741</span>  newdatafolder /s outDF</div><div class="line"><a name="l01742"></a><span class="lineno"> 1742</span>  variable /g r_index = rr</div><div class="line"><a name="l01743"></a><span class="lineno"> 1743</span>  variable /g s_index = ss</div><div class="line"><a name="l01744"></a><span class="lineno"> 1744</span>  wave /wave reduced_waves = <a class="code" href="pearl-area-import_8ipf.html#a44d495fba0dd2b82dec13760a07fd226">reduce_slab_image</a>(slabdata, image, reduction_func, func_param)</div><div class="line"><a name="l01745"></a><span class="lineno"> 1745</span>  variable /g func_result = numpnts(reduced_waves)</div><div class="line"><a name="l01746"></a><span class="lineno"> 1746</span> </div><div class="line"><a name="l01747"></a><span class="lineno"> 1747</span>  <span class="comment">// send output to queue and clean up</span></div><div class="line"><a name="l01748"></a><span class="lineno"> 1748</span>  <a class="code" href="pearl-area-import_8ipf.html#a27a72a3901a5342ca9dea02e3219631c">adh5_get_result_waves</a>(reduced_waves, "redw_", 0)</div><div class="line"><a name="l01749"></a><span class="lineno"> 1749</span>  WaveClear slabdata, image, reduced_waves</div><div class="line"><a name="l01750"></a><span class="lineno"> 1750</span>  ThreadGroupPutDF 0, :</div><div class="line"><a name="l01751"></a><span class="lineno"> 1751</span>  KillDataFolder dfr</div><div class="line"><a name="l01752"></a><span class="lineno"> 1752</span>  while (1)</div><div class="line"><a name="l01753"></a><span class="lineno"> 1753</span>  </div><div class="line"><a name="l01754"></a><span class="lineno"> 1754</span>  return 0</div><div class="line"><a name="l01755"></a><span class="lineno"> 1755</span> end</div><div class="line"><a name="l01756"></a><span class="lineno"> 1756</span> </div><div class="line"><a name="l01757"></a><span class="lineno"><a class="line" href="pearl-area-import_8ipf.html#a44d495fba0dd2b82dec13760a07fd226"> 1757</a></span> threadsafe static function /wave <a class="code" href="pearl-area-import_8ipf.html#a44d495fba0dd2b82dec13760a07fd226">reduce_slab_image</a>(slabdata, image, reduction_func, reduction_param)</div><div class="line"><a name="l01758"></a><span class="lineno"> 1758</span>  wave slabdata</div><div class="line"><a name="l01759"></a><span class="lineno"> 1759</span>  wave image</div><div class="line"><a name="l01760"></a><span class="lineno"> 1760</span>  funcref <a class="code" href="pearl-area-import_8ipf.html#ade69cb0f82e0c9cf6082d5fcc29f742f">adh5_default_reduction</a> reduction_func</div><div class="line"><a name="l01761"></a><span class="lineno"> 1761</span>  <span class="keywordtype">string</span> reduction_param</div><div class="line"><a name="l01762"></a><span class="lineno"> 1762</span>  </div><div class="line"><a name="l01763"></a><span class="lineno"> 1763</span>  switch (WaveDims(slabdata))</div><div class="line"><a name="l01764"></a><span class="lineno"> 1764</span>  case 2:</div><div class="line"><a name="l01765"></a><span class="lineno"> 1765</span>  image = slabdata[q][p]</div><div class="line"><a name="l01766"></a><span class="lineno"> 1766</span>  break</div><div class="line"><a name="l01767"></a><span class="lineno"> 1767</span>  case 3:</div><div class="line"><a name="l01768"></a><span class="lineno"> 1768</span>  image = slabdata[0][q][p]</div><div class="line"><a name="l01769"></a><span class="lineno"> 1769</span>  break</div><div class="line"><a name="l01770"></a><span class="lineno"> 1770</span>  case 4:</div><div class="line"><a name="l01771"></a><span class="lineno"> 1771</span>  image = slabdata[0][0][q][p]</div><div class="line"><a name="l01772"></a><span class="lineno"> 1772</span>  break</div><div class="line"><a name="l01773"></a><span class="lineno"> 1773</span>  endswitch</div><div class="line"><a name="l01774"></a><span class="lineno"> 1774</span> </div><div class="line"><a name="l01775"></a><span class="lineno"> 1775</span>  return reduction_func(image, reduction_param)</div><div class="line"><a name="l01776"></a><span class="lineno"> 1776</span> end</div><div class="line"><a name="l01777"></a><span class="lineno"> 1777</span> </div><div class="line"><a name="l01790"></a><span class="lineno"><a class="line" href="pearl-area-import_8ipf.html#acde16dc7a393250b17165344f865f7b5"> 1790</a></span> function <a class="code" href="pearl-area-import_8ipf.html#acde16dc7a393250b17165344f865f7b5">adh5_loadattr_all</a>(fileID, attributespath)</div><div class="line"><a name="l01791"></a><span class="lineno"> 1791</span>  variable fileID</div><div class="line"><a name="l01792"></a><span class="lineno"> 1792</span>  <span class="keywordtype">string</span> attributespath</div><div class="line"><a name="l01793"></a><span class="lineno"> 1793</span> </div><div class="line"><a name="l01794"></a><span class="lineno"> 1794</span>  <span class="keywordtype">string</span> datasetname</div><div class="line"><a name="l01795"></a><span class="lineno"> 1795</span>  <span class="keywordtype">string</span> datawavename</div><div class="line"><a name="l01796"></a><span class="lineno"> 1796</span>  </div><div class="line"><a name="l01797"></a><span class="lineno"> 1797</span>  <span class="comment">// avoid compilation error if HDF5 XOP has not been loaded</span></div><div class="line"><a name="l01798"></a><span class="lineno"> 1798</span>  <span class="preprocessor">#if Exists("HDF5LoadData")</span></div><div class="line"><a name="l01799"></a><span class="lineno"> 1799</span> </div><div class="line"><a name="l01800"></a><span class="lineno"> 1800</span>  <span class="comment">// datasets in NDAttributes group</span></div><div class="line"><a name="l01801"></a><span class="lineno"> 1801</span>  HDF5ListGroup /F /TYPE=2 fileID, attributespath</div><div class="line"><a name="l01802"></a><span class="lineno"> 1802</span>  <span class="keywordtype">string</span> h5datasets = S_HDF5ListGroup</div><div class="line"><a name="l01803"></a><span class="lineno"> 1803</span>  HDF5ListAttributes /TYPE=1 /Z fileID, attributespath</div><div class="line"><a name="l01804"></a><span class="lineno"> 1804</span>  <span class="keywordtype">string</span> h5attributes = S_HDF5ListAttributes</div><div class="line"><a name="l01805"></a><span class="lineno"> 1805</span>  </div><div class="line"><a name="l01806"></a><span class="lineno"> 1806</span>  variable nds = ItemsInList(h5datasets, <span class="stringliteral">";"</span>)</div><div class="line"><a name="l01807"></a><span class="lineno"> 1807</span>  variable na = ItemsInList(h5attributes, ";")</div><div class="line"><a name="l01808"></a><span class="lineno"> 1808</span>  variable ids</div><div class="line"><a name="l01809"></a><span class="lineno"> 1809</span>  variable idest = 0</div><div class="line"><a name="l01810"></a><span class="lineno"> 1810</span>  variable n_attr</div><div class="line"><a name="l01811"></a><span class="lineno"> 1811</span>  <span class="keywordtype">string</span> s_attr</div><div class="line"><a name="l01812"></a><span class="lineno"> 1812</span>  <span class="keywordtype">string</span> s_source</div><div class="line"><a name="l01813"></a><span class="lineno"> 1813</span> </div><div class="line"><a name="l01814"></a><span class="lineno"> 1814</span>  make /n=(nds+na) /t /o IN, ID, IV, IU</div><div class="line"><a name="l01815"></a><span class="lineno"> 1815</span>  </div><div class="line"><a name="l01816"></a><span class="lineno"> 1816</span>  for (ids = 0; ids < nds; ids += 1)</div><div class="line"><a name="l01817"></a><span class="lineno"> 1817</span>  datasetname = StringFromList(ids, h5datasets, ";")</div><div class="line"><a name="l01818"></a><span class="lineno"> 1818</span>  HDF5LoadData /O/Q fileID, datasetname</div><div class="line"><a name="l01819"></a><span class="lineno"> 1819</span>  if (v_flag == 0)</div><div class="line"><a name="l01820"></a><span class="lineno"> 1820</span>  datawavename = StringFromList(0, s_wavenames)</div><div class="line"><a name="l01821"></a><span class="lineno"> 1821</span>  else</div><div class="line"><a name="l01822"></a><span class="lineno"> 1822</span>  datawavename = ""</div><div class="line"><a name="l01823"></a><span class="lineno"> 1823</span>  endif</div><div class="line"><a name="l01824"></a><span class="lineno"> 1824</span>  HDF5LoadData /A="source"/O/Q/TYPE=2 fileID, datasetname</div><div class="line"><a name="l01825"></a><span class="lineno"> 1825</span>  if (v_flag == 0)</div><div class="line"><a name="l01826"></a><span class="lineno"> 1826</span>  wave /t source</div><div class="line"><a name="l01827"></a><span class="lineno"> 1827</span>  s_source = source[0]</div><div class="line"><a name="l01828"></a><span class="lineno"> 1828</span>  else</div><div class="line"><a name="l01829"></a><span class="lineno"> 1829</span>  s_source = ""</div><div class="line"><a name="l01830"></a><span class="lineno"> 1830</span>  endif</div><div class="line"><a name="l01831"></a><span class="lineno"> 1831</span>  <a class="code" href="pearl-area-import_8ipf.html#ac98a5f2d12b559aba4e53192c49a7743">read_attribute_info</a>(datawavename, s_source, idest)</div><div class="line"><a name="l01832"></a><span class="lineno"> 1832</span>  endfor</div><div class="line"><a name="l01833"></a><span class="lineno"> 1833</span>  </div><div class="line"><a name="l01834"></a><span class="lineno"> 1834</span>  <span class="comment">// attributes of NDAttributes group</span></div><div class="line"><a name="l01835"></a><span class="lineno"> 1835</span>  if (v_flag == 0)</div><div class="line"><a name="l01836"></a><span class="lineno"> 1836</span>  nds = ItemsInList(h5attributes, ";")</div><div class="line"><a name="l01837"></a><span class="lineno"> 1837</span>  else</div><div class="line"><a name="l01838"></a><span class="lineno"> 1838</span>  nds = 0</div><div class="line"><a name="l01839"></a><span class="lineno"> 1839</span>  endif</div><div class="line"><a name="l01840"></a><span class="lineno"> 1840</span>  for (ids = 0; ids < nds; ids += 1)</div><div class="line"><a name="l01841"></a><span class="lineno"> 1841</span>  datasetname = StringFromList(ids, h5attributes, ";")</div><div class="line"><a name="l01842"></a><span class="lineno"> 1842</span>  HDF5LoadData /A=datasetname/O/Q/TYPE=1 fileID, attributespath</div><div class="line"><a name="l01843"></a><span class="lineno"> 1843</span>  if (v_flag == 0)</div><div class="line"><a name="l01844"></a><span class="lineno"> 1844</span>  datawavename = StringFromList(0, s_wavenames)</div><div class="line"><a name="l01845"></a><span class="lineno"> 1845</span>  <a class="code" href="pearl-area-import_8ipf.html#ac98a5f2d12b559aba4e53192c49a7743">read_attribute_info</a>(datawavename, "", idest) <span class="comment">// we don't get the source of these attributes</span></div><div class="line"><a name="l01846"></a><span class="lineno"> 1846</span>  endif</div><div class="line"><a name="l01847"></a><span class="lineno"> 1847</span>  endfor</div><div class="line"><a name="l01848"></a><span class="lineno"> 1848</span>  </div><div class="line"><a name="l01849"></a><span class="lineno"> 1849</span>  redimension /n=(idest) IN, ID, IV, IU</div><div class="line"><a name="l01850"></a><span class="lineno"> 1850</span>  sort {IN, ID}, IN, ID, IV, IU</div><div class="line"><a name="l01851"></a><span class="lineno"> 1851</span> </div><div class="line"><a name="l01852"></a><span class="lineno"> 1852</span>  killwaves /z source</div><div class="line"><a name="l01853"></a><span class="lineno"> 1853</span> <span class="preprocessor"> #else</span></div><div class="line"><a name="l01854"></a><span class="lineno"> 1854</span>  Abort <span class="stringliteral">"HDF5 XOP not loaded."</span></div><div class="line"><a name="l01855"></a><span class="lineno"> 1855</span> <span class="preprocessor"> #endif</span></div><div class="line"><a name="l01856"></a><span class="lineno"> 1856</span>  </div><div class="line"><a name="l01857"></a><span class="lineno"> 1857</span> end</div><div class="line"><a name="l01858"></a><span class="lineno"> 1858</span> </div><div class="line"><a name="l01872"></a><span class="lineno"><a class="line" href="pearl-area-import_8ipf.html#ac98a5f2d12b559aba4e53192c49a7743"> 1872</a></span> <span class="keyword">static</span> <span class="keyword">function</span> <a class="code" href="pearl-area-import_8ipf.html#ac98a5f2d12b559aba4e53192c49a7743">read_attribute_info</a>(datawavename, source, idest)</div><div class="line"><a name="l01873"></a><span class="lineno"> 1873</span>  <span class="keywordtype">string</span> datawavename <span class="comment">// name of the attribute wave in the current folder.</span></div><div class="line"><a name="l01874"></a><span class="lineno"> 1874</span>  <span class="comment">// can be text or numeric.</span></div><div class="line"><a name="l01875"></a><span class="lineno"> 1875</span>  <span class="keywordtype">string</span> source</div><div class="line"><a name="l01876"></a><span class="lineno"> 1876</span>  <span class="comment">// source identifier (EPICS name) of the attribute.</span></div><div class="line"><a name="l01877"></a><span class="lineno"> 1877</span>  variable &idest</div><div class="line"><a name="l01878"></a><span class="lineno"> 1878</span>  <span class="comment">// destination index in IN, ID, IV, IU where the results are written.</span></div><div class="line"><a name="l01879"></a><span class="lineno"> 1879</span>  <span class="comment">// the variable is incremented if data was written, otherwise it is left unchanged.</span></div><div class="line"><a name="l01880"></a><span class="lineno"> 1880</span>  <span class="comment">// make sure IN, ID, IV, IU have at least idest + 1 elements.</span></div><div class="line"><a name="l01881"></a><span class="lineno"> 1881</span>  </div><div class="line"><a name="l01882"></a><span class="lineno"> 1882</span>  wave /t IN</div><div class="line"><a name="l01883"></a><span class="lineno"> 1883</span>  wave /t ID</div><div class="line"><a name="l01884"></a><span class="lineno"> 1884</span>  wave /t IV</div><div class="line"><a name="l01885"></a><span class="lineno"> 1885</span>  wave /t IU</div><div class="line"><a name="l01886"></a><span class="lineno"> 1886</span>  </div><div class="line"><a name="l01887"></a><span class="lineno"> 1887</span>  variable n_attr</div><div class="line"><a name="l01888"></a><span class="lineno"> 1888</span>  <span class="keywordtype">string</span> s_attr</div><div class="line"><a name="l01889"></a><span class="lineno"> 1889</span>  </div><div class="line"><a name="l01890"></a><span class="lineno"> 1890</span>  <span class="keywordflow">if</span> (exists(datawavename) == 1)</div><div class="line"><a name="l01891"></a><span class="lineno"> 1891</span>  <span class="keywordflow">if</span> (strlen(source) > 0)</div><div class="line"><a name="l01892"></a><span class="lineno"> 1892</span>  Note $datawavename, <span class="stringliteral">"PV="</span> + source</div><div class="line"><a name="l01893"></a><span class="lineno"> 1893</span>  endif</div><div class="line"><a name="l01894"></a><span class="lineno"> 1894</span>  <span class="keywordflow">switch</span>(WaveType($datawavename, 1))</div><div class="line"><a name="l01895"></a><span class="lineno"> 1895</span>  <span class="keywordflow">case</span> 1: <span class="comment">// numeric</span></div><div class="line"><a name="l01896"></a><span class="lineno"> 1896</span>  wave w_attr = $datawavename</div><div class="line"><a name="l01897"></a><span class="lineno"> 1897</span>  n_attr = numpnts(w_attr)</div><div class="line"><a name="l01898"></a><span class="lineno"> 1898</span>  sprintf s_attr, <span class="stringliteral">"%.12g"</span>, w_attr[0]</div><div class="line"><a name="l01899"></a><span class="lineno"> 1899</span>  <span class="keywordflow">break</span></div><div class="line"><a name="l01900"></a><span class="lineno"> 1900</span>  <span class="keywordflow">case</span> 2: <span class="comment">// text</span></div><div class="line"><a name="l01901"></a><span class="lineno"> 1901</span>  wave /t wt_attr = $datawavename</div><div class="line"><a name="l01902"></a><span class="lineno"> 1902</span>  n_attr = numpnts(wt_attr)</div><div class="line"><a name="l01903"></a><span class="lineno"> 1903</span>  s_attr = wt_attr[0]</div><div class="line"><a name="l01904"></a><span class="lineno"> 1904</span>  <span class="keywordflow">break</span></div><div class="line"><a name="l01905"></a><span class="lineno"> 1905</span>  <span class="keywordflow">default</span>: <span class="comment">// unknown</span></div><div class="line"><a name="l01906"></a><span class="lineno"> 1906</span>  n_attr = 0</div><div class="line"><a name="l01907"></a><span class="lineno"> 1907</span>  endswitch</div><div class="line"><a name="l01908"></a><span class="lineno"> 1908</span>  <span class="keywordflow">if</span> (n_attr == 1)</div><div class="line"><a name="l01909"></a><span class="lineno"> 1909</span>  IN[idest] = source</div><div class="line"><a name="l01910"></a><span class="lineno"> 1910</span>  ID[idest] = datawavename</div><div class="line"><a name="l01911"></a><span class="lineno"> 1911</span>  IV[idest] = s_attr</div><div class="line"><a name="l01912"></a><span class="lineno"> 1912</span>  IU[idest] = <span class="stringliteral">""</span> <span class="comment">// we don't get the units</span></div><div class="line"><a name="l01913"></a><span class="lineno"> 1913</span>  idest += 1</div><div class="line"><a name="l01914"></a><span class="lineno"> 1914</span>  endif</div><div class="line"><a name="l01915"></a><span class="lineno"> 1915</span>  endif</div><div class="line"><a name="l01916"></a><span class="lineno"> 1916</span> end</div><div class="line"><a name="l01917"></a><span class="lineno"> 1917</span> </div><div class="line"><a name="l01925"></a><span class="lineno"><a class="line" href="pearl-area-import_8ipf.html#a227e4db1c51a910dcf86d355473fe74e"> 1925</a></span> <span class="keyword">function</span> <a class="code" href="pearl-area-import_8ipf.html#a227e4db1c51a910dcf86d355473fe74e">adh5_scale_scienta</a>(data)</div><div class="line"><a name="l01926"></a><span class="lineno"> 1926</span>  wave data</div><div class="line"><a name="l01927"></a><span class="lineno"> 1927</span>  </div><div class="line"><a name="l01928"></a><span class="lineno"> 1928</span>  dfref saveDF = GetDataFolderDFR()</div><div class="line"><a name="l01929"></a><span class="lineno"> 1929</span>  </div><div class="line"><a name="l01930"></a><span class="lineno"> 1930</span>  dfref dataDF = GetWavesDataFolderDFR(data)</div><div class="line"><a name="l01931"></a><span class="lineno"> 1931</span>  dfref attrDF = <a class="code" href="pearl-area-import_8ipf.html#aa3cdc56096a6a1bf2a2d80a6245a36d2">GetAttrDataFolderDFR</a>(data)</div><div class="line"><a name="l01932"></a><span class="lineno"> 1932</span>  </div><div class="line"><a name="l01933"></a><span class="lineno"> 1933</span>  wave /SDFR=attrDF LensMode</div><div class="line"><a name="l01934"></a><span class="lineno"> 1934</span>  wave /SDFR=attrDF /Z ChannelBegin, ChannelEnd</div><div class="line"><a name="l01935"></a><span class="lineno"> 1935</span>  wave /SDFR=attrDF /Z SliceBegin, SliceEnd</div><div class="line"><a name="l01936"></a><span class="lineno"> 1936</span>  </div><div class="line"><a name="l01937"></a><span class="lineno"> 1937</span>  variable EDim, ADim</div><div class="line"><a name="l01938"></a><span class="lineno"> 1938</span>  variable ELow, EHigh, ALow, AHigh</div><div class="line"><a name="l01939"></a><span class="lineno"> 1939</span>  <span class="keywordtype">string</span> EUnit, AUnit</div><div class="line"><a name="l01940"></a><span class="lineno"> 1940</span>  </div><div class="line"><a name="l01941"></a><span class="lineno"> 1941</span>  <span class="comment">// which dimension is angle and which one is energy?</span></div><div class="line"><a name="l01942"></a><span class="lineno"> 1942</span>  strswitch(GetDimLabel(data, 0, -1))</div><div class="line"><a name="l01943"></a><span class="lineno"> 1943</span>  case "AD_Dim0":</div><div class="line"><a name="l01944"></a><span class="lineno"> 1944</span>  EDim = 0</div><div class="line"><a name="l01945"></a><span class="lineno"> 1945</span>  break</div><div class="line"><a name="l01946"></a><span class="lineno"> 1946</span>  case "AD_Dim1":</div><div class="line"><a name="l01947"></a><span class="lineno"> 1947</span>  EDim = 1</div><div class="line"><a name="l01948"></a><span class="lineno"> 1948</span>  break</div><div class="line"><a name="l01949"></a><span class="lineno"> 1949</span>  default:</div><div class="line"><a name="l01950"></a><span class="lineno"> 1950</span>  EDim = -1</div><div class="line"><a name="l01951"></a><span class="lineno"> 1951</span>  endswitch</div><div class="line"><a name="l01952"></a><span class="lineno"> 1952</span>  strswitch(GetDimLabel(data, 1, -1))</div><div class="line"><a name="l01953"></a><span class="lineno"> 1953</span>  case "AD_Dim0":</div><div class="line"><a name="l01954"></a><span class="lineno"> 1954</span>  ADim = 0</div><div class="line"><a name="l01955"></a><span class="lineno"> 1955</span>  break</div><div class="line"><a name="l01956"></a><span class="lineno"> 1956</span>  case "AD_Dim1":</div><div class="line"><a name="l01957"></a><span class="lineno"> 1957</span>  ADim = 1</div><div class="line"><a name="l01958"></a><span class="lineno"> 1958</span>  break</div><div class="line"><a name="l01959"></a><span class="lineno"> 1959</span>  default:</div><div class="line"><a name="l01960"></a><span class="lineno"> 1960</span>  ADim = -1</div><div class="line"><a name="l01961"></a><span class="lineno"> 1961</span>  endswitch</div><div class="line"><a name="l01962"></a><span class="lineno"> 1962</span>  </div><div class="line"><a name="l01963"></a><span class="lineno"> 1963</span>  <span class="comment">// defaults (point scaling)</span></div><div class="line"><a name="l01964"></a><span class="lineno"> 1964</span>  if (EDim >= 0)</div><div class="line"><a name="l01965"></a><span class="lineno"> 1965</span>  ELow = dimoffset(data, EDim)</div><div class="line"><a name="l01966"></a><span class="lineno"> 1966</span>  EHigh = dimoffset(data, EDim) + dimdelta(data, EDim) * (dimsize(data, EDim) - 1)</div><div class="line"><a name="l01967"></a><span class="lineno"> 1967</span>  EUnit = "eV"</div><div class="line"><a name="l01968"></a><span class="lineno"> 1968</span>  endif</div><div class="line"><a name="l01969"></a><span class="lineno"> 1969</span>  if (ADim >= 0)</div><div class="line"><a name="l01970"></a><span class="lineno"> 1970</span>  ALow = dimoffset(data, ADim)</div><div class="line"><a name="l01971"></a><span class="lineno"> 1971</span>  AHigh = dimoffset(data, ADim) + dimdelta(data, ADim) * (dimsize(data, ADim) - 1)</div><div class="line"><a name="l01972"></a><span class="lineno"> 1972</span>  AUnit = "arb."</div><div class="line"><a name="l01973"></a><span class="lineno"> 1973</span>  endif</div><div class="line"><a name="l01974"></a><span class="lineno"> 1974</span>  </div><div class="line"><a name="l01975"></a><span class="lineno"> 1975</span>  <span class="comment">// lens mode can give more detail</span></div><div class="line"><a name="l01976"></a><span class="lineno"> 1976</span>  if (waveexists(LensMode) && (numpnts(LensMode) >= 1))</div><div class="line"><a name="l01977"></a><span class="lineno"> 1977</span>  switch(LensMode[0])</div><div class="line"><a name="l01978"></a><span class="lineno"> 1978</span>  case 1: <span class="comment">// Angular45</span></div><div class="line"><a name="l01979"></a><span class="lineno"> 1979</span>  ALow = -45/2</div><div class="line"><a name="l01980"></a><span class="lineno"> 1980</span>  AHigh = +45/2</div><div class="line"><a name="l01981"></a><span class="lineno"> 1981</span>  AUnit = "°"</div><div class="line"><a name="l01982"></a><span class="lineno"> 1982</span>  break</div><div class="line"><a name="l01983"></a><span class="lineno"> 1983</span>  case 2: <span class="comment">// Angular60</span></div><div class="line"><a name="l01984"></a><span class="lineno"> 1984</span>  ALow = -60/2</div><div class="line"><a name="l01985"></a><span class="lineno"> 1985</span>  AHigh = +60/2</div><div class="line"><a name="l01986"></a><span class="lineno"> 1986</span>  AUnit = "°"</div><div class="line"><a name="l01987"></a><span class="lineno"> 1987</span>  break</div><div class="line"><a name="l01988"></a><span class="lineno"> 1988</span>  endswitch</div><div class="line"><a name="l01989"></a><span class="lineno"> 1989</span>  endif</div><div class="line"><a name="l01990"></a><span class="lineno"> 1990</span>  </div><div class="line"><a name="l01991"></a><span class="lineno"> 1991</span>  <span class="comment">// best option if scales are explicit in separate waves</span></div><div class="line"><a name="l01992"></a><span class="lineno"> 1992</span>  if (waveexists(ChannelBegin) && waveexists(ChannelEnd) && (numpnts(ChannelBegin) >= 1) && (numpnts(ChannelEnd) >= 1))</div><div class="line"><a name="l01993"></a><span class="lineno"> 1993</span>  ELow = ChannelBegin[0]</div><div class="line"><a name="l01994"></a><span class="lineno"> 1994</span>  EHigh = ChannelEnd[0]</div><div class="line"><a name="l01995"></a><span class="lineno"> 1995</span>  endif</div><div class="line"><a name="l01996"></a><span class="lineno"> 1996</span>  if (waveexists(SliceBegin) && waveexists(SliceEnd) && (numpnts(SliceBegin) >= 1) && (numpnts(SliceEnd) >= 1))</div><div class="line"><a name="l01997"></a><span class="lineno"> 1997</span>  ALow = SliceBegin[0]</div><div class="line"><a name="l01998"></a><span class="lineno"> 1998</span>  AHigh = SliceEnd[0]</div><div class="line"><a name="l01999"></a><span class="lineno"> 1999</span>  endif</div><div class="line"><a name="l02000"></a><span class="lineno"> 2000</span> </div><div class="line"><a name="l02001"></a><span class="lineno"> 2001</span>  <span class="comment">// apply new scales</span></div><div class="line"><a name="l02002"></a><span class="lineno"> 2002</span>  switch(EDim)</div><div class="line"><a name="l02003"></a><span class="lineno"> 2003</span>  case 0:</div><div class="line"><a name="l02004"></a><span class="lineno"> 2004</span>  setscale /i x ELow, EHigh, EUnit, data</div><div class="line"><a name="l02005"></a><span class="lineno"> 2005</span>  break</div><div class="line"><a name="l02006"></a><span class="lineno"> 2006</span>  case 1:</div><div class="line"><a name="l02007"></a><span class="lineno"> 2007</span>  setscale /i y ELow, EHigh, EUnit, data</div><div class="line"><a name="l02008"></a><span class="lineno"> 2008</span>  break</div><div class="line"><a name="l02009"></a><span class="lineno"> 2009</span>  endswitch</div><div class="line"><a name="l02010"></a><span class="lineno"> 2010</span>  switch(ADim)</div><div class="line"><a name="l02011"></a><span class="lineno"> 2011</span>  case 0:</div><div class="line"><a name="l02012"></a><span class="lineno"> 2012</span>  setscale /i x ALow, AHigh, AUnit, data</div><div class="line"><a name="l02013"></a><span class="lineno"> 2013</span>  break</div><div class="line"><a name="l02014"></a><span class="lineno"> 2014</span>  case 1:</div><div class="line"><a name="l02015"></a><span class="lineno"> 2015</span>  setscale /i y ALow, AHigh, AUnit, data</div><div class="line"><a name="l02016"></a><span class="lineno"> 2016</span>  break</div><div class="line"><a name="l02017"></a><span class="lineno"> 2017</span>  endswitch</div><div class="line"><a name="l02018"></a><span class="lineno"> 2018</span> </div><div class="line"><a name="l02019"></a><span class="lineno"> 2019</span>  setscale d 0, 0, "arb.", data</div><div class="line"><a name="l02020"></a><span class="lineno"> 2020</span>  </div><div class="line"><a name="l02021"></a><span class="lineno"> 2021</span>  setdatafolder saveDF</div><div class="line"><a name="l02022"></a><span class="lineno"> 2022</span> end</div><div class="line"><a name="l02023"></a><span class="lineno"> 2023</span> </div><div class="line"><a name="l02030"></a><span class="lineno"><a class="line" href="pearl-area-import_8ipf.html#a1fdcc02340375afe8d8cd7537c6e9cfb"> 2030</a></span> function <a class="code" href="pearl-area-import_8ipf.html#a1fdcc02340375afe8d8cd7537c6e9cfb">adh5_scale_scan</a>(data)</div><div class="line"><a name="l02031"></a><span class="lineno"> 2031</span>  wave data</div><div class="line"><a name="l02032"></a><span class="lineno"> 2032</span> </div><div class="line"><a name="l02033"></a><span class="lineno"> 2033</span>  dfref saveDF = GetDataFolderDFR()</div><div class="line"><a name="l02034"></a><span class="lineno"> 2034</span>  </div><div class="line"><a name="l02035"></a><span class="lineno"> 2035</span>  dfref dataDF = GetWavesDataFolderDFR(data)</div><div class="line"><a name="l02036"></a><span class="lineno"> 2036</span>  wave /SDFR=dataDF AcquisitionMode, DetectorMode, EnergyMode</div><div class="line"><a name="l02037"></a><span class="lineno"> 2037</span> </div><div class="line"><a name="l02038"></a><span class="lineno"> 2038</span>  wave /SDFR=dataDF /z Scan1Active, Scan2Active</div><div class="line"><a name="l02039"></a><span class="lineno"> 2039</span>  wave /SDFR=dataDF /t /z Scan1Positioner1, Scan1Readback1</div><div class="line"><a name="l02040"></a><span class="lineno"> 2040</span>  wave /SDFR=dataDF /t /z Scan1Positioner2, Scan1Readback2</div><div class="line"><a name="l02041"></a><span class="lineno"> 2041</span>  wave /SDFR=dataDF /t /z Scan2Positioner1, Scan2Readback1</div><div class="line"><a name="l02042"></a><span class="lineno"> 2042</span>  wave /SDFR=dataDF /t /z Scan2Positioner2, Scan2Readback2</div><div class="line"><a name="l02043"></a><span class="lineno"> 2043</span> </div><div class="line"><a name="l02044"></a><span class="lineno"> 2044</span>  <span class="comment">// TODO : search the data folder for positioner waves,</span></div><div class="line"><a name="l02045"></a><span class="lineno"> 2045</span>  <span class="comment">// i.e. waves with the PV name corresponding to Scan1Positioner1 in their wave note.</span></div><div class="line"><a name="l02046"></a><span class="lineno"> 2046</span>  wave /z zscale</div><div class="line"><a name="l02047"></a><span class="lineno"> 2047</span>  </div><div class="line"><a name="l02048"></a><span class="lineno"> 2048</span>  strswitch(GetDimLabel(data, 0, -1))</div><div class="line"><a name="l02049"></a><span class="lineno"> 2049</span>  case "AD_DimN":</div><div class="line"><a name="l02050"></a><span class="lineno"> 2050</span>  setscale /i x zscale[0], zscale[numpnts(zscale)-1], "", data</div><div class="line"><a name="l02051"></a><span class="lineno"> 2051</span>  break</div><div class="line"><a name="l02052"></a><span class="lineno"> 2052</span>  endswitch</div><div class="line"><a name="l02053"></a><span class="lineno"> 2053</span>  strswitch(GetDimLabel(data, 1, -1))</div><div class="line"><a name="l02054"></a><span class="lineno"> 2054</span>  case "AD_DimN":</div><div class="line"><a name="l02055"></a><span class="lineno"> 2055</span>  setscale /i y zscale[0], zscale[numpnts(zscale)-1], "", data</div><div class="line"><a name="l02056"></a><span class="lineno"> 2056</span>  break</div><div class="line"><a name="l02057"></a><span class="lineno"> 2057</span>  endswitch</div><div class="line"><a name="l02058"></a><span class="lineno"> 2058</span>  strswitch(GetDimLabel(data, 2, -1))</div><div class="line"><a name="l02059"></a><span class="lineno"> 2059</span>  case "AD_DimN":</div><div class="line"><a name="l02060"></a><span class="lineno"> 2060</span>  setscale /i z zscale[0], zscale[numpnts(zscale)-1], "", data</div><div class="line"><a name="l02061"></a><span class="lineno"> 2061</span>  break</div><div class="line"><a name="l02062"></a><span class="lineno"> 2062</span>  endswitch</div><div class="line"><a name="l02063"></a><span class="lineno"> 2063</span>  </div><div class="line"><a name="l02064"></a><span class="lineno"> 2064</span>  setdatafolder saveDF</div><div class="line"><a name="l02065"></a><span class="lineno"> 2065</span> end</div><div class="ttc" id="pearl-area-import_8ipf_html_a98f29671bdce6a5981e8865de8b9d483"><div class="ttname"><a href="pearl-area-import_8ipf.html#a98f29671bdce6a5981e8865de8b9d483">adh5_load_preview</a></div><div class="ttdeci">string adh5_load_preview(string ANickName, string APathName, string AFileName, variable load_data=defaultValue, variable load_attr=defaultValue)</div><div class="ttdoc">load a single image from a HDF5 file created by the Area Detector software. </div><div class="ttdef"><b>Definition:</b> <a href="pearl-area-import_8ipf_source.html#l00387">pearl-area-import.ipf:387</a></div></div>
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<div class="ttc" id="pearl-gui-tools_8ipf_html_aca0a41a0f28a35ac7535df30ddbd79fe"><div class="ttname"><a href="pearl-gui-tools_8ipf.html#aca0a41a0f28a35ac7535df30ddbd79fe">kill_progress_panel</a></div><div class="ttdeci">variable kill_progress_panel()</div><div class="ttdef"><b>Definition:</b> <a href="pearl-gui-tools_8ipf_source.html#l00050">pearl-gui-tools.ipf:50</a></div></div>
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<div class="ttc" id="pearl-gui-tools_8ipf_html_aaf29d090c81e00cf44af295193b24c5a"><div class="ttname"><a href="pearl-gui-tools_8ipf.html#aaf29d090c81e00cf44af295193b24c5a">display_progress_panel</a></div><div class="ttdeci">variable display_progress_panel(string title, string message, variable progress_max)</div><div class="ttdef"><b>Definition:</b> <a href="pearl-gui-tools_8ipf_source.html#l00018">pearl-gui-tools.ipf:18</a></div></div>
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<div class="ttc" id="pearl-area-import_8ipf_html_ac76d5ba94a3d7c864437420d80c77064"><div class="ttname"><a href="pearl-area-import_8ipf.html#ac76d5ba94a3d7c864437420d80c77064">adh5_load_info</a></div><div class="ttdeci">string adh5_load_info(string APathName, string AFileName)</div><div class="ttdoc">load descriptive info from a HDF5 file created by the Area Detector software. </div><div class="ttdef"><b>Definition:</b> <a href="pearl-area-import_8ipf_source.html#l00497">pearl-area-import.ipf:497</a></div></div>
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<div class="ttc" id="pearl-area-import_8ipf_html_aedff2e67d2e1bac907f2eaf24a6e5c3c"><div class="ttname"><a href="pearl-area-import_8ipf.html#aedff2e67d2e1bac907f2eaf24a6e5c3c">ad_load_dialog</a></div><div class="ttdeci">variable ad_load_dialog(string APathName)</div><div class="ttdoc">load area detector data files selected in a file dialog window </div><div class="ttdef"><b>Definition:</b> <a href="pearl-area-import_8ipf_source.html#l00167">pearl-area-import.ipf:167</a></div></div>
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<div class="ttc" id="pearl-area-profiles_8ipf_html_aa40fd5049f993e72fd52a66a6cdde7cc"><div class="ttname"><a href="pearl-area-profiles_8ipf.html#aa40fd5049f993e72fd52a66a6cdde7cc">ad_profile_x_w</a></div><div class="ttdeci">threadsafe wave ad_profile_x_w(wave dataset, variable q1, variable q2, wave destwave, variable noavg=defaultValue)</div><div class="ttdoc">1D cut through 2D dataset along X dimension, existing destination wave. </div><div class="ttdef"><b>Definition:</b> <a href="pearl-area-profiles_8ipf_source.html#l00504">pearl-area-profiles.ipf:504</a></div></div>
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<div class="ttc" id="pearl-area-import_8ipf_html_ac98a5f2d12b559aba4e53192c49a7743"><div class="ttname"><a href="pearl-area-import_8ipf.html#ac98a5f2d12b559aba4e53192c49a7743">read_attribute_info</a></div><div class="ttdeci">static variable read_attribute_info(string datawavename, string source, variable *idest)</div><div class="ttdoc">sub-function of adh5_loadattr_all. </div><div class="ttdef"><b>Definition:</b> <a href="pearl-area-import_8ipf_source.html#l01872">pearl-area-import.ipf:1872</a></div></div>
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<div class="ttc" id="pearl-compat_8ipf_html_aa1f59acc532c7eee75c83b70ee1feaa9"><div class="ttname"><a href="pearl-compat_8ipf.html#aa1f59acc532c7eee75c83b70ee1feaa9">PearlCleanupName</a></div><div class="ttdeci">string PearlCleanupName(string name)</div><div class="ttdef"><b>Definition:</b> <a href="pearl-compat_8ipf_source.html#l00047">pearl-compat.ipf:47</a></div></div>
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<div class="ttc" id="pearl-area-import_8ipf_html_aa3cdc56096a6a1bf2a2d80a6245a36d2"><div class="ttname"><a href="pearl-area-import_8ipf.html#aa3cdc56096a6a1bf2a2d80a6245a36d2">GetAttrDataFolderDFR</a></div><div class="ttdeci">static dfr GetAttrDataFolderDFR(wave data)</div><div class="ttdoc">find the attributes data folder of an area detector dataset. </div><div class="ttdef"><b>Definition:</b> <a href="pearl-area-import_8ipf_source.html#l00707">pearl-area-import.ipf:707</a></div></div>
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<div class="ttc" id="pearl-area-import_8ipf_html_a9439de3b676e686eeca4e6b2588c01a6"><div class="ttname"><a href="pearl-area-import_8ipf.html#a9439de3b676e686eeca4e6b2588c01a6">adh5_setup_profile</a></div><div class="ttdeci">threadsafe variable adh5_setup_profile(wave image, wave profile, variable dim)</div><div class="ttdoc">set up a one-dimensional wave for a line profile based on a 2D original wave. </div><div class="ttdef"><b>Definition:</b> <a href="pearl-area-import_8ipf_source.html#l01134">pearl-area-import.ipf:1134</a></div></div>
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<div class="ttc" id="pearl-area-import_8ipf_html_a27a72a3901a5342ca9dea02e3219631c"><div class="ttname"><a href="pearl-area-import_8ipf.html#a27a72a3901a5342ca9dea02e3219631c">adh5_get_result_waves</a></div><div class="ttdeci">threadsafe variable adh5_get_result_waves(wave results, string result_prefix, variable start_index)</div><div class="ttdoc">copy waves from wave reference wave into current data folder </div><div class="ttdef"><b>Definition:</b> <a href="pearl-area-import_8ipf_source.html#l01430">pearl-area-import.ipf:1430</a></div></div>
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<div class="ttc" id="pearl-area-import_8ipf_html_a227e4db1c51a910dcf86d355473fe74e"><div class="ttname"><a href="pearl-area-import_8ipf.html#a227e4db1c51a910dcf86d355473fe74e">adh5_scale_scienta</a></div><div class="ttdeci">variable adh5_scale_scienta(wave data)</div><div class="ttdoc">set the energy and angle scales of an area detector dataset from the Scienta analyser. </div><div class="ttdef"><b>Definition:</b> <a href="pearl-area-import_8ipf_source.html#l01925">pearl-area-import.ipf:1925</a></div></div>
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<div class="ttc" id="pearl-area-import_8ipf_html_a98804ce23a5c2c314ac243baa0824424"><div class="ttname"><a href="pearl-area-import_8ipf.html#a98804ce23a5c2c314ac243baa0824424">adh5_test_reduction_func</a></div><div class="ttdeci">string adh5_test_reduction_func(wave source, funcref reduction_func, string reduction_param, string result_prefix)</div><div class="ttdoc">wrapper function for testing reduction functions from the command line. </div><div class="ttdef"><b>Definition:</b> <a href="pearl-area-import_8ipf_source.html#l01167">pearl-area-import.ipf:1167</a></div></div>
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<div class="ttc" id="pearl-area-import_8ipf_html_acde16dc7a393250b17165344f865f7b5"><div class="ttname"><a href="pearl-area-import_8ipf.html#acde16dc7a393250b17165344f865f7b5">adh5_loadattr_all</a></div><div class="ttdeci">variable adh5_loadattr_all(variable fileID, string attributespath)</div><div class="ttdoc">load an NDAttributes group from an open HDF5 file into the current data folder. </div><div class="ttdef"><b>Definition:</b> <a href="pearl-area-import_8ipf_source.html#l01790">pearl-area-import.ipf:1790</a></div></div>
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<div class="ttc" id="pearl-area-import_8ipf_html_a1fdcc02340375afe8d8cd7537c6e9cfb"><div class="ttname"><a href="pearl-area-import_8ipf.html#a1fdcc02340375afe8d8cd7537c6e9cfb">adh5_scale_scan</a></div><div class="ttdeci">variable adh5_scale_scan(wave data)</div><div class="ttdoc">scales the extra dimensions of an area detector dataset according to the EPICS scan ...</div><div class="ttdef"><b>Definition:</b> <a href="pearl-area-import_8ipf_source.html#l02030">pearl-area-import.ipf:2030</a></div></div>
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<div class="ttc" id="pearl-area-import_8ipf_html_a4efc9178892310c9e2caf40c61d71bd7"><div class="ttname"><a href="pearl-area-import_8ipf.html#a4efc9178892310c9e2caf40c61d71bd7">reduce_brick_worker</a></div><div class="ttdeci">static threadsafe variable reduce_brick_worker(funcref reduction_func)</div><div class="ttdoc">thread worker for adh5_reduce_brick </div><div class="ttdef"><b>Definition:</b> <a href="pearl-area-import_8ipf_source.html#l01377">pearl-area-import.ipf:1377</a></div></div>
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<div class="ttc" id="pearl-area-import_8ipf_html_ae88bc41882fd16c94c04d856f3e062e4"><div class="ttname"><a href="pearl-area-import_8ipf.html#ae88bc41882fd16c94c04d856f3e062e4">adh5_reduce_brick</a></div><div class="ttdeci">variable adh5_reduce_brick(wave source, funcref reduction_func, string reduction_param, string result_prefix, variable progress=defaultValue, variable nthreads=defaultValue)</div><div class="ttdoc">reduce a three-dimensional intensity distribution </div><div class="ttdef"><b>Definition:</b> <a href="pearl-area-import_8ipf_source.html#l01198">pearl-area-import.ipf:1198</a></div></div>
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<div class="ttc" id="pearl-area-import_8ipf_html_ad28dbbba73e553f7b5dcf8baf1c86786"><div class="ttname"><a href="pearl-area-import_8ipf.html#ad28dbbba73e553f7b5dcf8baf1c86786">ad_suggest_foldername</a></div><div class="ttdeci">string ad_suggest_foldername(string filename, variable ignoredate=defaultValue, string sourcename=defaultValue, variable unique=defaultValue)</div><div class="ttdoc">generate the name of a data folder based on a file name. </div><div class="ttdef"><b>Definition:</b> <a href="pearl-area-import_8ipf_source.html#l00106">pearl-area-import.ipf:106</a></div></div>
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<div class="ttc" id="pearl-area-profiles_8ipf_html_a8b09e13162fa47cc076e1e661e80b002"><div class="ttname"><a href="pearl-area-profiles_8ipf.html#a8b09e13162fa47cc076e1e661e80b002">ad_profile_y_w</a></div><div class="ttdeci">threadsafe wave ad_profile_y_w(wave dataset, variable p1, variable p2, wave destwave, variable noavg=defaultValue)</div><div class="ttdoc">1D cut through 2D dataset along X dimension, existing destination wave. </div><div class="ttdef"><b>Definition:</b> <a href="pearl-area-profiles_8ipf_source.html#l00567">pearl-area-profiles.ipf:567</a></div></div>
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<div class="ttc" id="pearl-area-import_8ipf_html_ab1040bf272c69dc69777b2f91df41fab"><div class="ttname"><a href="pearl-area-import_8ipf.html#ab1040bf272c69dc69777b2f91df41fab">adh5_load_complete</a></div><div class="ttdeci">string adh5_load_complete(string ANickName, string APathName, string AFileName, variable load_data=defaultValue, variable load_attr=defaultValue)</div><div class="ttdoc">import everything from a HDF5 file created by the Area Detector software. </div><div class="ttdef"><b>Definition:</b> <a href="pearl-area-import_8ipf_source.html#l00207">pearl-area-import.ipf:207</a></div></div>
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<div class="ttc" id="pearl-area-import_8ipf_html_a3f2ac36f961941e46e80a775de8300e5"><div class="ttname"><a href="pearl-area-import_8ipf.html#a3f2ac36f961941e46e80a775de8300e5">adh5_load_reduced_detector</a></div><div class="ttdeci">variable adh5_load_reduced_detector(variable fileID, string detectorpath, funcref reduction_func, string reduction_param, variable progress=defaultValue, variable nthreads=defaultValue)</div><div class="ttdoc">load a reduced detector dataset from the open HDF5 file. </div><div class="ttdef"><b>Definition:</b> <a href="pearl-area-import_8ipf_source.html#l01466">pearl-area-import.ipf:1466</a></div></div>
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<div class="ttc" id="pearl-area-import_8ipf_html_a98f9339cd2fae80d0d92451df88395aa"><div class="ttname"><a href="pearl-area-import_8ipf.html#a98f9339cd2fae80d0d92451df88395aa">adh5_load_reduced</a></div><div class="ttdeci">string adh5_load_reduced(string ANickName, string APathName, string AFileName, funcref reduction_func, string reduction_param, variable load_data=defaultValue, variable load_attr=defaultValue, variable progress=defaultValue)</div><div class="ttdoc">load and reduce a dataset from a HDF5 file created by the Area Detector software. ...</div><div class="ttdef"><b>Definition:</b> <a href="pearl-area-import_8ipf_source.html#l00302">pearl-area-import.ipf:302</a></div></div>
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<div class="ttc" id="pearl-area-import_8ipf_html_acfa6d2675e63f4f686289ef853b262a9"><div class="ttname"><a href="pearl-area-import_8ipf.html#acfa6d2675e63f4f686289ef853b262a9">adh5_redim</a></div><div class="ttdeci">variable adh5_redim(wave data)</div><div class="ttdoc">redimension a multi-dimensional area detector array loaded from HDF5. </div><div class="ttdef"><b>Definition:</b> <a href="pearl-area-import_8ipf_source.html#l00626">pearl-area-import.ipf:626</a></div></div>
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<div class="ttc" id="pearl-area-import_8ipf_html_ade69cb0f82e0c9cf6082d5fcc29f742f"><div class="ttname"><a href="pearl-area-import_8ipf.html#ade69cb0f82e0c9cf6082d5fcc29f742f">adh5_default_reduction</a></div><div class="ttdeci">threadsafe wave adh5_default_reduction(wave source, string *param)</div><div class="ttdoc">function prototype for adh5_load_reduced_detector </div><div class="ttdef"><b>Definition:</b> <a href="pearl-area-import_8ipf_source.html#l01111">pearl-area-import.ipf:1111</a></div></div>
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<div class="ttc" id="pearl-area-import_8ipf_html_a4a9741d1c19b10bb98b73bd5163a497b"><div class="ttname"><a href="pearl-area-import_8ipf.html#a4a9741d1c19b10bb98b73bd5163a497b">adh5_load_detector_slabs</a></div><div class="ttdeci">variable adh5_load_detector_slabs(variable fileID, string detectorpath, variable progress=defaultValue)</div><div class="ttdoc">load the detector dataset from the open HDF5 file. </div><div class="ttdef"><b>Definition:</b> <a href="pearl-area-import_8ipf_source.html#l00780">pearl-area-import.ipf:780</a></div></div>
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<div class="ttc" id="pearl-area-import_8ipf_html_a774751d1857ea6946a942448dc913128"><div class="ttname"><a href="pearl-area-import_8ipf.html#a774751d1857ea6946a942448dc913128">adh5_scale</a></div><div class="ttdeci">variable adh5_scale(wave data, string source=defaultValue)</div><div class="ttdoc">set the dimension scales of an area detector dataset. </div><div class="ttdef"><b>Definition:</b> <a href="pearl-area-import_8ipf_source.html#l00726">pearl-area-import.ipf:726</a></div></div>
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<div class="ttc" id="pearl-gui-tools_8ipf_html_a97ad19d83cf0007c4bcf97a32164610f"><div class="ttname"><a href="pearl-gui-tools_8ipf.html#a97ad19d83cf0007c4bcf97a32164610f">update_progress_panel</a></div><div class="ttdeci">variable update_progress_panel(variable progress, string message=defaultValue, variable progress_max=defaultValue)</div><div class="ttdef"><b>Definition:</b> <a href="pearl-gui-tools_8ipf_source.html#l00032">pearl-gui-tools.ipf:32</a></div></div>
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<div class="ttc" id="pearl-area-import_8ipf_html_a84dc7f466b42dde5d96c49827b2122cf"><div class="ttname"><a href="pearl-area-import_8ipf.html#a84dc7f466b42dde5d96c49827b2122cf">adh5_load_detector</a></div><div class="ttdeci">variable adh5_load_detector(variable fileID, string detectorpath)</div><div class="ttdoc">load the detector dataset from the open HDF5 file. </div><div class="ttdef"><b>Definition:</b> <a href="pearl-area-import_8ipf_source.html#l00581">pearl-area-import.ipf:581</a></div></div>
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<div class="ttc" id="pearl-area-import_8ipf_html_a44d495fba0dd2b82dec13760a07fd226"><div class="ttname"><a href="pearl-area-import_8ipf.html#a44d495fba0dd2b82dec13760a07fd226">reduce_slab_image</a></div><div class="ttdeci">static threadsafe wave reduce_slab_image(wave slabdata, wave image, funcref reduction_func, string reduction_param)</div><div class="ttdef"><b>Definition:</b> <a href="pearl-area-import_8ipf_source.html#l01757">pearl-area-import.ipf:1757</a></div></div>
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<div class="ttc" id="pearl-area-import_8ipf_html_ae2cfa1ac6651cfc3fb0dfce03494995b"><div class="ttname"><a href="pearl-area-import_8ipf.html#ae2cfa1ac6651cfc3fb0dfce03494995b">BeforeFileOpenHook</a></div><div class="ttdeci">static variable BeforeFileOpenHook(variable refNum, string fileName, string path, string type, string creator, variable kind)</div><div class="ttdoc">callback function for drag&drop of HDF5 files into Igor. </div><div class="ttdef"><b>Definition:</b> <a href="pearl-area-import_8ipf_source.html#l00042">pearl-area-import.ipf:42</a></div></div>
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<div class="ttc" id="pearl-area-import_8ipf_html_aa5e29dc1a380311d00a5f85be867e47b"><div class="ttname"><a href="pearl-area-import_8ipf.html#aa5e29dc1a380311d00a5f85be867e47b">adh5_list_reduction_funcs</a></div><div class="ttdeci">string adh5_list_reduction_funcs()</div><div class="ttdoc">get a list of functions which can be used as reduction functions. </div><div class="ttdef"><b>Definition:</b> <a href="pearl-area-import_8ipf_source.html#l01041">pearl-area-import.ipf:1041</a></div></div>
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<div class="ttc" id="pearl-area-import_8ipf_html_a931a7bfaaf75d308a0ce3c74ffc751bc"><div class="ttname"><a href="pearl-area-import_8ipf.html#a931a7bfaaf75d308a0ce3c74ffc751bc">adh5_load_detector_image</a></div><div class="ttdeci">variable adh5_load_detector_image(variable fileID, string detectorpath, variable dim2start, variable dim2count, variable dim3start, variable dim3count)</div><div class="ttdoc">load a single image from the detector dataset of the open HDF5 file </div><div class="ttdef"><b>Definition:</b> <a href="pearl-area-import_8ipf_source.html#l00945">pearl-area-import.ipf:945</a></div></div>
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<div class="ttc" id="pearl-area-profiles_8ipf_html_a65bb359c057a9d900c486e186c9974df"><div class="ttname"><a href="pearl-area-profiles_8ipf.html#a65bb359c057a9d900c486e186c9974df">ad_extract_slab</a></div><div class="ttdeci">threadsafe wave ad_extract_slab(wave dataset, variable x1, variable x2, variable y1, variable y2, variable z1, variable z2, string destname, variable noavg=defaultValue, variable pscale=defaultValue)</div><div class="ttdoc">2D cut through 3D dataset, integrate in normal dimension </div><div class="ttdef"><b>Definition:</b> <a href="pearl-area-profiles_8ipf_source.html#l00313">pearl-area-profiles.ipf:313</a></div></div>
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<div class="ttc" id="pearl-area-import_8ipf_html_a33f8faf117450af1d6dae9ef48786cd6"><div class="ttname"><a href="pearl-area-import_8ipf.html#a33f8faf117450af1d6dae9ef48786cd6">reduce_slab_worker</a></div><div class="ttdeci">static threadsafe variable reduce_slab_worker(funcref reduction_func)</div><div class="ttdef"><b>Definition:</b> <a href="pearl-area-import_8ipf_source.html#l01718">pearl-area-import.ipf:1718</a></div></div>
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