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<a href="pearl-pshell-import_8ipf.html">Go to the documentation of this file.</a><div class="fragment"><div class="line"><a name="l00001"></a><span class="lineno"> 1</span> <span class="preprocessor">#pragma rtGlobals=3 // Use modern global access method and strict wave access.</span></div><div class="line"><a name="l00002"></a><span class="lineno"> 2</span> <span class="preprocessor">#pragma IgorVersion = 6.36</span></div><div class="line"><a name="l00003"></a><span class="lineno"> 3</span> <span class="preprocessor">#pragma ModuleName = PearlPShellImport</span></div><div class="line"><a name="l00004"></a><span class="lineno"> 4</span> <span class="preprocessor">#include <HDF5 Browser></span></div><div class="line"><a name="l00005"></a><span class="lineno"> 5</span> <span class="preprocessor">#include "pearl-compat"</span></div><div class="line"><a name="l00006"></a><span class="lineno"> 6</span> <span class="preprocessor">#include "pearl-gui-tools"</span></div><div class="line"><a name="l00007"></a><span class="lineno"> 7</span> <span class="preprocessor">#include "pearl-area-import"</span></div><div class="line"><a name="l00008"></a><span class="lineno"> 8</span> </div><div class="line"><a name="l00009"></a><span class="lineno"> 9</span> <span class="comment">// copyright (c) 2013-18 Paul Scherrer Institut</span></div><div class="line"><a name="l00010"></a><span class="lineno"> 10</span> <span class="comment">//</span></div><div class="line"><a name="l00011"></a><span class="lineno"> 11</span> <span class="comment">// Licensed under the Apache License, Version 2.0 (the "License");</span></div><div class="line"><a name="l00012"></a><span class="lineno"> 12</span> <span class="comment">// you may not use this file except in compliance with the License.</span></div><div class="line"><a name="l00013"></a><span class="lineno"> 13</span> <span class="comment">// You may obtain a copy of the License at</span></div><div class="line"><a name="l00014"></a><span class="lineno"> 14</span> <span class="comment">// http:///www.apache.org/licenses/LICENSE-2.0</span></div><div class="line"><a name="l00015"></a><span class="lineno"> 15</span> </div><div class="line"><a name="l00058"></a><span class="lineno"> 58</span> </div><div class="line"><a name="l00063"></a><span class="lineno"> 63</span> </div><div class="line"><a name="l00065"></a><span class="lineno"><a class="line" href="pearl-pshell-import_8ipf.html#a5ad52cb10171572c454f9426d3a9be21"> 65</a></span> strconstant <a class="code" href="pearl-pshell-import_8ipf.html#a5ad52cb10171572c454f9426d3a9be21">kEnergyDimLabel</a> = <span class="stringliteral">"energy"</span></div><div class="line"><a name="l00066"></a><span class="lineno"> 66</span> </div><div class="line"><a name="l00068"></a><span class="lineno"><a class="line" href="pearl-pshell-import_8ipf.html#a83930d4384b0238fc8416ba03dbc0386"> 68</a></span> strconstant <a class="code" href="pearl-pshell-import_8ipf.html#a83930d4384b0238fc8416ba03dbc0386">kAngleDimLabel</a> = <span class="stringliteral">"angle"</span></div><div class="line"><a name="l00069"></a><span class="lineno"> 69</span> </div><div class="line"><a name="l00071"></a><span class="lineno"><a class="line" href="pearl-pshell-import_8ipf.html#a412b4753ceb753d705a113a26c018b22"> 71</a></span> strconstant <a class="code" href="pearl-pshell-import_8ipf.html#a412b4753ceb753d705a113a26c018b22">kScanDimLabel</a> = <span class="stringliteral">"scan"</span></div><div class="line"><a name="l00072"></a><span class="lineno"> 72</span> </div><div class="line"><a name="l00075"></a><span class="lineno"><a class="line" href="pearl-pshell-import_8ipf.html#a277cd450cca7832aa44f8097934e6acb"> 75</a></span> strconstant <a class="code" href="pearl-pshell-import_8ipf.html#a277cd450cca7832aa44f8097934e6acb">kDataDimLabel</a> = <span class="stringliteral">"data"</span></div><div class="line"><a name="l00076"></a><span class="lineno"> 76</span> </div><div class="line"><a name="l00078"></a><span class="lineno"><a class="line" href="pearl-pshell-import_8ipf.html#a3c72087695969f42ea91c000de47b26e"> 78</a></span> strconstant <a class="code" href="pearl-pshell-import_8ipf.html#a3c72087695969f42ea91c000de47b26e">kPreviewDatasets</a> = <span class="stringliteral">"ScientaImage;ScientaSpectrum;ImageAngleDistribution;ImageEnergyDistribution;Counts;SampleCurrent;"</span></div><div class="line"><a name="l00079"></a><span class="lineno"> 79</span> </div><div class="line"><a name="l00081"></a><span class="lineno"><a class="line" href="pearl-pshell-import_8ipf.html#a03f00b3299bc3df671fcc239f7dd5418"> 81</a></span> strconstant <a class="code" href="pearl-pshell-import_8ipf.html#a03f00b3299bc3df671fcc239f7dd5418">kScientaScalingDatasets</a> = <span class="stringliteral">"LensMode;ScientaChannelBegin;ScientaChannelEnd;ScientaSliceBegin;ScientaSliceEnd;"</span></div><div class="line"><a name="l00082"></a><span class="lineno"> 82</span> </div><div class="line"><a name="l00084"></a><span class="lineno"><a class="line" href="pearl-pshell-import_8ipf.html#a0f2c168c04d075734edb995361aefb82"> 84</a></span> strconstant <a class="code" href="pearl-pshell-import_8ipf.html#a0f2c168c04d075734edb995361aefb82">kTransposedDatasets</a> = <span class="stringliteral">"ScientaImage;"</span></div><div class="line"><a name="l00085"></a><span class="lineno"> 85</span> </div><div class="line"><a name="l00087"></a><span class="lineno"><a class="line" href="pearl-pshell-import_8ipf.html#a5745428740b64cd66394a7fcd78b86f1"> 87</a></span> constant <a class="code" href="pearl-pshell-import_8ipf.html#a5745428740b64cd66394a7fcd78b86f1">kDetectorSensitivity</a> = 1</div><div class="line"><a name="l00088"></a><span class="lineno"> 88</span> </div><div class="line"><a name="l00110"></a><span class="lineno"><a class="line" href="pearl-pshell-import_8ipf.html#accc20b0fc6bda95ba0cd0aea6633086f"> 110</a></span> <span class="keyword">function</span> <a class="code" href="pearl-pshell-import_8ipf.html#accc20b0fc6bda95ba0cd0aea6633086f">psh5_open_file</a>(ANickName, APathName, AFileName)</div><div class="line"><a name="l00111"></a><span class="lineno"> 111</span>  <span class="keywordtype">string</span> ANickName</div><div class="line"><a name="l00112"></a><span class="lineno"> 112</span>  <span class="keywordtype">string</span> APathName</div><div class="line"><a name="l00113"></a><span class="lineno"> 113</span>  <span class="keywordtype">string</span> AFileName</div><div class="line"><a name="l00114"></a><span class="lineno"> 114</span>  </div><div class="line"><a name="l00115"></a><span class="lineno"> 115</span>  setdatafolder root:</div><div class="line"><a name="l00116"></a><span class="lineno"> 116</span>  newdatafolder /s /o $(<span class="stringliteral">"root:"</span> + ANickName)</div><div class="line"><a name="l00117"></a><span class="lineno"> 117</span>  dfref fileDF = GetDataFolderDFR()</div><div class="line"><a name="l00118"></a><span class="lineno"> 118</span>  </div><div class="line"><a name="l00119"></a><span class="lineno"> 119</span>  variable fileID</div><div class="line"><a name="l00120"></a><span class="lineno"> 120</span>  HDF5OpenFile /P=$APathName /R fileID as AFileName</div><div class="line"><a name="l00121"></a><span class="lineno"> 121</span>  if (v_flag == 0)</div><div class="line"><a name="l00122"></a><span class="lineno"> 122</span>  <span class="keywordtype">string</span> /g s_filepath</div><div class="line"><a name="l00123"></a><span class="lineno"> 123</span>  <span class="keywordtype">string</span> /g s_scanpaths</div><div class="line"><a name="l00124"></a><span class="lineno"> 124</span>  s_filepath = s_path + s_filename</div><div class="line"><a name="l00125"></a><span class="lineno"> 125</span>  s_scanpaths = <a class="code" href="pearl-pshell-import_8ipf.html#a2152f7c39a187b740cf9890767ffac3f">psh5_list_scans</a>(fileID)</div><div class="line"><a name="l00126"></a><span class="lineno"> 126</span>  else</div><div class="line"><a name="l00127"></a><span class="lineno"> 127</span>  fileID = 0</div><div class="line"><a name="l00128"></a><span class="lineno"> 128</span>  endif</div><div class="line"><a name="l00129"></a><span class="lineno"> 129</span>  </div><div class="line"><a name="l00130"></a><span class="lineno"> 130</span>  return fileID</div><div class="line"><a name="l00131"></a><span class="lineno"> 131</span> end</div><div class="line"><a name="l00132"></a><span class="lineno"> 132</span> </div><div class="line"><a name="l00140"></a><span class="lineno"><a class="line" href="pearl-pshell-import_8ipf.html#a2fc497747287d6fe40c6de997ed4a90d"> 140</a></span> function <a class="code" href="pearl-pshell-import_8ipf.html#a2fc497747287d6fe40c6de997ed4a90d">psh5_close_file</a>(fileID)</div><div class="line"><a name="l00141"></a><span class="lineno"> 141</span>  variable fileID</div><div class="line"><a name="l00142"></a><span class="lineno"> 142</span> </div><div class="line"><a name="l00143"></a><span class="lineno"> 143</span>  HDF5CloseFile fileID</div><div class="line"><a name="l00144"></a><span class="lineno"> 144</span> end</div><div class="line"><a name="l00145"></a><span class="lineno"> 145</span> </div><div class="line"><a name="l00170"></a><span class="lineno"><a class="line" href="pearl-pshell-import_8ipf.html#a8a5ce6c2767607de194b4c148ee98c27"> 170</a></span> function /s <a class="code" href="pearl-pshell-import_8ipf.html#a8a5ce6c2767607de194b4c148ee98c27">psh5_load_complete</a>(ANickName, APathName, AFileName, [load_data, load_attr])</div><div class="line"><a name="l00171"></a><span class="lineno"> 171</span>  <span class="keywordtype">string</span> ANickName</div><div class="line"><a name="l00172"></a><span class="lineno"> 172</span>  <span class="keywordtype">string</span> APathName</div><div class="line"><a name="l00173"></a><span class="lineno"> 173</span>  <span class="keywordtype">string</span> AFileName</div><div class="line"><a name="l00174"></a><span class="lineno"> 174</span>  variable load_data</div><div class="line"><a name="l00175"></a><span class="lineno"> 175</span>  variable load_attr</div><div class="line"><a name="l00176"></a><span class="lineno"> 176</span>  </div><div class="line"><a name="l00177"></a><span class="lineno"> 177</span>  if (ParamIsDefault(load_data))</div><div class="line"><a name="l00178"></a><span class="lineno"> 178</span>  load_data = 1</div><div class="line"><a name="l00179"></a><span class="lineno"> 179</span>  endif</div><div class="line"><a name="l00180"></a><span class="lineno"> 180</span>  if (ParamIsDefault(load_attr))</div><div class="line"><a name="l00181"></a><span class="lineno"> 181</span>  load_attr = 1</div><div class="line"><a name="l00182"></a><span class="lineno"> 182</span>  endif</div><div class="line"><a name="l00183"></a><span class="lineno"> 183</span>  </div><div class="line"><a name="l00184"></a><span class="lineno"> 184</span>  dfref saveDF = GetDataFolderDFR()</div><div class="line"><a name="l00185"></a><span class="lineno"> 185</span>  </div><div class="line"><a name="l00186"></a><span class="lineno"> 186</span>  <span class="comment">// performance monitoring</span></div><div class="line"><a name="l00187"></a><span class="lineno"> 187</span>  variable timerRefNum</div><div class="line"><a name="l00188"></a><span class="lineno"> 188</span>  variable /g psh5_perf_secs</div><div class="line"><a name="l00189"></a><span class="lineno"> 189</span>  timerRefNum = startMSTimer</div><div class="line"><a name="l00190"></a><span class="lineno"> 190</span>  </div><div class="line"><a name="l00191"></a><span class="lineno"> 191</span>  variable fileID = <a class="code" href="pearl-pshell-import_8ipf.html#accc20b0fc6bda95ba0cd0aea6633086f">psh5_open_file</a>(ANickName, APathName, AFileName)</div><div class="line"><a name="l00192"></a><span class="lineno"> 192</span>  if (fileID)</div><div class="line"><a name="l00193"></a><span class="lineno"> 193</span>  dfref fileDF = GetDataFolderDFR()</div><div class="line"><a name="l00194"></a><span class="lineno"> 194</span>  svar s_filepath</div><div class="line"><a name="l00195"></a><span class="lineno"> 195</span>  svar s_scanpaths</div><div class="line"><a name="l00196"></a><span class="lineno"> 196</span>  AFileName = s_filepath</div><div class="line"><a name="l00197"></a><span class="lineno"> 197</span>  print "loading " + s_filepath + "\r"</div><div class="line"><a name="l00198"></a><span class="lineno"> 198</span> </div><div class="line"><a name="l00199"></a><span class="lineno"> 199</span>  variable ig</div><div class="line"><a name="l00200"></a><span class="lineno"> 200</span>  variable ng = ItemsInList(s_scanpaths, ";")</div><div class="line"><a name="l00201"></a><span class="lineno"> 201</span>  <span class="keywordtype">string</span> sg</div><div class="line"><a name="l00202"></a><span class="lineno"> 202</span>  <span class="keywordtype">string</span> folder</div><div class="line"><a name="l00203"></a><span class="lineno"> 203</span>  </div><div class="line"><a name="l00204"></a><span class="lineno"> 204</span>  for (ig = 0; ig < ng; ig += 1)</div><div class="line"><a name="l00205"></a><span class="lineno"> 205</span>  sg = StringFromList(ig, s_scanpaths, ";")</div><div class="line"><a name="l00206"></a><span class="lineno"> 206</span>  folder = ReplaceString("/", sg, "")</div><div class="line"><a name="l00207"></a><span class="lineno"> 207</span>  folder = ReplaceString(" ", folder, "")</div><div class="line"><a name="l00208"></a><span class="lineno"> 208</span>  folder = <a class="code" href="pearl-compat_8ipf.html#aa1f59acc532c7eee75c83b70ee1feaa9">PearlCleanupName</a>(folder)</div><div class="line"><a name="l00209"></a><span class="lineno"> 209</span>  setdatafolder fileDF</div><div class="line"><a name="l00210"></a><span class="lineno"> 210</span>  newdatafolder /s /o $folder</div><div class="line"><a name="l00211"></a><span class="lineno"> 211</span>  <a class="code" href="pearl-pshell-import_8ipf.html#a0a02f87e19e825964aa17c46ed51df8c">psh5_load_scan_complete</a>(fileID, sg, load_data=load_data, load_attr=load_attr)</div><div class="line"><a name="l00212"></a><span class="lineno"> 212</span>  endfor</div><div class="line"><a name="l00213"></a><span class="lineno"> 213</span>  </div><div class="line"><a name="l00214"></a><span class="lineno"> 214</span>  <a class="code" href="pearl-pshell-import_8ipf.html#a2fc497747287d6fe40c6de997ed4a90d">psh5_close_file</a>(fileID)</div><div class="line"><a name="l00215"></a><span class="lineno"> 215</span>  else</div><div class="line"><a name="l00216"></a><span class="lineno"> 216</span>  AFileName = ""</div><div class="line"><a name="l00217"></a><span class="lineno"> 217</span>  endif</div><div class="line"><a name="l00218"></a><span class="lineno"> 218</span> </div><div class="line"><a name="l00219"></a><span class="lineno"> 219</span>  psh5_perf_secs = stopMSTimer(timerRefNum) / 1e6</div><div class="line"><a name="l00220"></a><span class="lineno"> 220</span>  </div><div class="line"><a name="l00221"></a><span class="lineno"> 221</span>  setdatafolder saveDF</div><div class="line"><a name="l00222"></a><span class="lineno"> 222</span>  return AFileName</div><div class="line"><a name="l00223"></a><span class="lineno"> 223</span> end</div><div class="line"><a name="l00224"></a><span class="lineno"> 224</span> </div><div class="line"><a name="l00251"></a><span class="lineno"><a class="line" href="pearl-pshell-import_8ipf.html#a1dc6c971120749b378014f1f63cb6668"> 251</a></span> function /s <a class="code" href="pearl-pshell-import_8ipf.html#a1dc6c971120749b378014f1f63cb6668">psh5_load_preview</a>(APathName, AFileName, [load_data, load_attr, pref_scans, pref_datasets])</div><div class="line"><a name="l00252"></a><span class="lineno"> 252</span>  <span class="keywordtype">string</span> APathName</div><div class="line"><a name="l00253"></a><span class="lineno"> 253</span>  <span class="keywordtype">string</span> AFileName</div><div class="line"><a name="l00254"></a><span class="lineno"> 254</span>  variable load_data</div><div class="line"><a name="l00255"></a><span class="lineno"> 255</span>  variable load_attr</div><div class="line"><a name="l00256"></a><span class="lineno"> 256</span>  <span class="keywordtype">string</span> pref_scans</div><div class="line"><a name="l00257"></a><span class="lineno"> 257</span>  <span class="keywordtype">string</span> pref_datasets</div><div class="line"><a name="l00258"></a><span class="lineno"> 258</span>  </div><div class="line"><a name="l00259"></a><span class="lineno"> 259</span>  if (ParamIsDefault(load_data))</div><div class="line"><a name="l00260"></a><span class="lineno"> 260</span>  load_data = 1</div><div class="line"><a name="l00261"></a><span class="lineno"> 261</span>  endif</div><div class="line"><a name="l00262"></a><span class="lineno"> 262</span>  if (ParamIsDefault(load_attr))</div><div class="line"><a name="l00263"></a><span class="lineno"> 263</span>  load_attr = 1</div><div class="line"><a name="l00264"></a><span class="lineno"> 264</span>  endif</div><div class="line"><a name="l00265"></a><span class="lineno"> 265</span>  if (ParamIsDefault(pref_scans))</div><div class="line"><a name="l00266"></a><span class="lineno"> 266</span>  pref_scans = "*scan1*;"</div><div class="line"><a name="l00267"></a><span class="lineno"> 267</span>  endif</div><div class="line"><a name="l00268"></a><span class="lineno"> 268</span>  if (ParamIsDefault(pref_datasets))</div><div class="line"><a name="l00269"></a><span class="lineno"> 269</span>  pref_datasets = ""</div><div class="line"><a name="l00270"></a><span class="lineno"> 270</span>  endif</div><div class="line"><a name="l00271"></a><span class="lineno"> 271</span>  </div><div class="line"><a name="l00272"></a><span class="lineno"> 272</span>  dfref saveDF = GetDataFolderDFR()</div><div class="line"><a name="l00273"></a><span class="lineno"> 273</span> </div><div class="line"><a name="l00274"></a><span class="lineno"> 274</span>  variable fileID</div><div class="line"><a name="l00275"></a><span class="lineno"> 275</span>  <span class="keywordtype">string</span> scanpaths = ""</div><div class="line"><a name="l00276"></a><span class="lineno"> 276</span>  <span class="keywordtype">string</span> dataname = ""</div><div class="line"><a name="l00277"></a><span class="lineno"> 277</span>  </div><div class="line"><a name="l00278"></a><span class="lineno"> 278</span>  <span class="comment">// performance monitoring</span></div><div class="line"><a name="l00279"></a><span class="lineno"> 279</span>  variable timerRefNum</div><div class="line"><a name="l00280"></a><span class="lineno"> 280</span>  variable /g adh5_perf_secs</div><div class="line"><a name="l00281"></a><span class="lineno"> 281</span>  timerRefNum = startMSTimer</div><div class="line"><a name="l00282"></a><span class="lineno"> 282</span>  </div><div class="line"><a name="l00283"></a><span class="lineno"> 283</span>  HDF5OpenFile /P=$APathName /R /Z fileID as AFileName</div><div class="line"><a name="l00284"></a><span class="lineno"> 284</span>  if (v_flag == 0)</div><div class="line"><a name="l00285"></a><span class="lineno"> 285</span>  AFileName = s_path + s_filename</div><div class="line"><a name="l00286"></a><span class="lineno"> 286</span>  dfref fileDF = GetDataFolderDFR()</div><div class="line"><a name="l00287"></a><span class="lineno"> 287</span> </div><div class="line"><a name="l00288"></a><span class="lineno"> 288</span>  scanpaths = <a class="code" href="pearl-pshell-import_8ipf.html#a2152f7c39a187b740cf9890767ffac3f">psh5_list_scans</a>(fileID)</div><div class="line"><a name="l00289"></a><span class="lineno"> 289</span>  variable ng = ItemsInList(scanpaths)</div><div class="line"><a name="l00290"></a><span class="lineno"> 290</span>  variable ig</div><div class="line"><a name="l00291"></a><span class="lineno"> 291</span>  <span class="keywordtype">string</span> sg</div><div class="line"><a name="l00292"></a><span class="lineno"> 292</span>  variable np = ItemsInList(pref_scans)</div><div class="line"><a name="l00293"></a><span class="lineno"> 293</span>  variable ip</div><div class="line"><a name="l00294"></a><span class="lineno"> 294</span>  <span class="keywordtype">string</span> sp</div><div class="line"><a name="l00295"></a><span class="lineno"> 295</span>  variable found = 0</div><div class="line"><a name="l00296"></a><span class="lineno"> 296</span>  if (ng > 0)</div><div class="line"><a name="l00297"></a><span class="lineno"> 297</span>  for (ip = 0; ip < np; ip += 1)</div><div class="line"><a name="l00298"></a><span class="lineno"> 298</span>  for (ig = 0; ig < ng; ig += 1)</div><div class="line"><a name="l00299"></a><span class="lineno"> 299</span>  sg = StringFromList(ig, scanpaths)</div><div class="line"><a name="l00300"></a><span class="lineno"> 300</span>  sp = StringFromList(ip, pref_scans)</div><div class="line"><a name="l00301"></a><span class="lineno"> 301</span>  if (StringMatch(sg, sp))</div><div class="line"><a name="l00302"></a><span class="lineno"> 302</span>  found = 1</div><div class="line"><a name="l00303"></a><span class="lineno"> 303</span>  break</div><div class="line"><a name="l00304"></a><span class="lineno"> 304</span>  endif</div><div class="line"><a name="l00305"></a><span class="lineno"> 305</span>  endfor</div><div class="line"><a name="l00306"></a><span class="lineno"> 306</span>  if (found)</div><div class="line"><a name="l00307"></a><span class="lineno"> 307</span>  break</div><div class="line"><a name="l00308"></a><span class="lineno"> 308</span>  endif</div><div class="line"><a name="l00309"></a><span class="lineno"> 309</span>  endfor</div><div class="line"><a name="l00310"></a><span class="lineno"> 310</span>  if (!found)</div><div class="line"><a name="l00311"></a><span class="lineno"> 311</span>  ig = 0</div><div class="line"><a name="l00312"></a><span class="lineno"> 312</span>  endif</div><div class="line"><a name="l00313"></a><span class="lineno"> 313</span>  sg = StringFromList(ig, scanpaths)</div><div class="line"><a name="l00314"></a><span class="lineno"> 314</span>  </div><div class="line"><a name="l00315"></a><span class="lineno"> 315</span>  if (load_attr)</div><div class="line"><a name="l00316"></a><span class="lineno"> 316</span>  setdatafolder fileDF</div><div class="line"><a name="l00317"></a><span class="lineno"> 317</span>  newdatafolder /o/s attr</div><div class="line"><a name="l00318"></a><span class="lineno"> 318</span>  killwaves /a/z</div><div class="line"><a name="l00319"></a><span class="lineno"> 319</span>  <a class="code" href="pearl-pshell-import_8ipf.html#aec191d0167bbf606d24396f4658104b5">psh5_load_scan_attrs</a>(fileID, sg)</div><div class="line"><a name="l00320"></a><span class="lineno"> 320</span>  endif</div><div class="line"><a name="l00321"></a><span class="lineno"> 321</span>  </div><div class="line"><a name="l00322"></a><span class="lineno"> 322</span>  setdatafolder fileDF</div><div class="line"><a name="l00323"></a><span class="lineno"> 323</span>  dataname = <a class="code" href="pearl-pshell-import_8ipf.html#ad3b9354b137ba4f1bc3ed2e74f24dc88">psh5_load_scan_preview</a>(fileID, sg, set_scale=load_attr, pref_datasets=pref_datasets)</div><div class="line"><a name="l00324"></a><span class="lineno"> 324</span>  else</div><div class="line"><a name="l00325"></a><span class="lineno"> 325</span>  print "no scans found in file " + AFileName</div><div class="line"><a name="l00326"></a><span class="lineno"> 326</span>  endif</div><div class="line"><a name="l00327"></a><span class="lineno"> 327</span> </div><div class="line"><a name="l00328"></a><span class="lineno"> 328</span>  HDF5CloseFile fileID</div><div class="line"><a name="l00329"></a><span class="lineno"> 329</span>  endif</div><div class="line"><a name="l00330"></a><span class="lineno"> 330</span> </div><div class="line"><a name="l00331"></a><span class="lineno"> 331</span>  if (timerRefNum >= 0)</div><div class="line"><a name="l00332"></a><span class="lineno"> 332</span>  adh5_perf_secs = stopMSTimer(timerRefNum) / 1e6</div><div class="line"><a name="l00333"></a><span class="lineno"> 333</span>  endif</div><div class="line"><a name="l00334"></a><span class="lineno"> 334</span>  </div><div class="line"><a name="l00335"></a><span class="lineno"> 335</span>  setdatafolder saveDF</div><div class="line"><a name="l00336"></a><span class="lineno"> 336</span>  return dataname</div><div class="line"><a name="l00337"></a><span class="lineno"> 337</span> end</div><div class="line"><a name="l00338"></a><span class="lineno"> 338</span> </div><div class="line"><a name="l00361"></a><span class="lineno"><a class="line" href="pearl-pshell-import_8ipf.html#a0a02f87e19e825964aa17c46ed51df8c"> 361</a></span> function /s <a class="code" href="pearl-pshell-import_8ipf.html#a0a02f87e19e825964aa17c46ed51df8c">psh5_load_scan_complete</a>(fileID, scanpath, [load_data, load_attr])</div><div class="line"><a name="l00362"></a><span class="lineno"> 362</span>  variable fileID</div><div class="line"><a name="l00363"></a><span class="lineno"> 363</span>  <span class="keywordtype">string</span> scanpath</div><div class="line"><a name="l00364"></a><span class="lineno"> 364</span>  variable load_data</div><div class="line"><a name="l00365"></a><span class="lineno"> 365</span>  variable load_attr</div><div class="line"><a name="l00366"></a><span class="lineno"> 366</span>  </div><div class="line"><a name="l00367"></a><span class="lineno"> 367</span>  if (ParamIsDefault(load_data))</div><div class="line"><a name="l00368"></a><span class="lineno"> 368</span>  load_data = 1</div><div class="line"><a name="l00369"></a><span class="lineno"> 369</span>  endif</div><div class="line"><a name="l00370"></a><span class="lineno"> 370</span>  if (ParamIsDefault(load_attr))</div><div class="line"><a name="l00371"></a><span class="lineno"> 371</span>  load_attr = 1</div><div class="line"><a name="l00372"></a><span class="lineno"> 372</span>  endif</div><div class="line"><a name="l00373"></a><span class="lineno"> 373</span>  </div><div class="line"><a name="l00374"></a><span class="lineno"> 374</span>  dfref saveDF = GetDataFolderDFR()</div><div class="line"><a name="l00375"></a><span class="lineno"> 375</span>  </div><div class="line"><a name="l00376"></a><span class="lineno"> 376</span>  dfref dataDF = GetDataFolderDFR()</div><div class="line"><a name="l00377"></a><span class="lineno"> 377</span>  <span class="keywordtype">string</span> wavenames</div><div class="line"><a name="l00378"></a><span class="lineno"> 378</span>  <span class="keywordtype">string</span> attrnames</div><div class="line"><a name="l00379"></a><span class="lineno"> 379</span>  <a class="code" href="pearl-pshell-import_8ipf.html#aa56c25d64b3e59f74d6dd92a599cce4f">psh5_load_scan_meta</a>(fileID, scanpath)</div><div class="line"><a name="l00380"></a><span class="lineno"> 380</span>  if (load_attr)</div><div class="line"><a name="l00381"></a><span class="lineno"> 381</span>  newdatafolder /s /o attr</div><div class="line"><a name="l00382"></a><span class="lineno"> 382</span>  attrnames = <a class="code" href="pearl-pshell-import_8ipf.html#aec191d0167bbf606d24396f4658104b5">psh5_load_scan_attrs</a>(fileID, scanpath)</div><div class="line"><a name="l00383"></a><span class="lineno"> 383</span>  endif</div><div class="line"><a name="l00384"></a><span class="lineno"> 384</span>  if (load_data)</div><div class="line"><a name="l00385"></a><span class="lineno"> 385</span>  setdatafolder dataDF</div><div class="line"><a name="l00386"></a><span class="lineno"> 386</span>  wavenames = <a class="code" href="pearl-pshell-import_8ipf.html#ad26b0b56d7ccd23547535091c9430569">psh5_load_scan_data</a>(fileID, scanpath)</div><div class="line"><a name="l00387"></a><span class="lineno"> 387</span>  endif</div><div class="line"><a name="l00388"></a><span class="lineno"> 388</span>  if (load_data && load_attr)</div><div class="line"><a name="l00389"></a><span class="lineno"> 389</span>  setdatafolder dataDF</div><div class="line"><a name="l00390"></a><span class="lineno"> 390</span>  <a class="code" href="pearl-pshell-import_8ipf.html#af08a467036c64f70ca3dfe644fcc457c">ps_scale_datasets</a>()</div><div class="line"><a name="l00391"></a><span class="lineno"> 391</span>  endif</div><div class="line"><a name="l00392"></a><span class="lineno"> 392</span> </div><div class="line"><a name="l00393"></a><span class="lineno"> 393</span>  setdatafolder saveDF</div><div class="line"><a name="l00394"></a><span class="lineno"> 394</span>  return wavenames</div><div class="line"><a name="l00395"></a><span class="lineno"> 395</span> end</div><div class="line"><a name="l00396"></a><span class="lineno"> 396</span> </div><div class="line"><a name="l00405"></a><span class="lineno"><a class="line" href="pearl-pshell-import_8ipf.html#a2152f7c39a187b740cf9890767ffac3f"> 405</a></span> function /s <a class="code" href="pearl-pshell-import_8ipf.html#a2152f7c39a187b740cf9890767ffac3f">psh5_list_scans</a>(fileID)</div><div class="line"><a name="l00406"></a><span class="lineno"> 406</span>  variable fileID</div><div class="line"><a name="l00407"></a><span class="lineno"> 407</span>  </div><div class="line"><a name="l00408"></a><span class="lineno"> 408</span>  HDF5ListGroup /F /TYPE=1 fileID, "/"</div><div class="line"><a name="l00409"></a><span class="lineno"> 409</span>  </div><div class="line"><a name="l00410"></a><span class="lineno"> 410</span>  variable ig</div><div class="line"><a name="l00411"></a><span class="lineno"> 411</span>  variable ng = ItemsInList(S_HDF5ListGroup, ";")</div><div class="line"><a name="l00412"></a><span class="lineno"> 412</span>  <span class="keywordtype">string</span> sg</div><div class="line"><a name="l00413"></a><span class="lineno"> 413</span>  <span class="keywordtype">string</span> scans = ""</div><div class="line"><a name="l00414"></a><span class="lineno"> 414</span>  </div><div class="line"><a name="l00415"></a><span class="lineno"> 415</span>  for (ig = 0; ig < ng; ig += 1)</div><div class="line"><a name="l00416"></a><span class="lineno"> 416</span>  sg = StringFromList(ig, S_HDF5ListGroup, ";")</div><div class="line"><a name="l00417"></a><span class="lineno"> 417</span>  if (cmpstr(sg[1,4], "scan") == 0)</div><div class="line"><a name="l00418"></a><span class="lineno"> 418</span>  scans = AddListItem(sg, scans, ";", inf)</div><div class="line"><a name="l00419"></a><span class="lineno"> 419</span>  endif</div><div class="line"><a name="l00420"></a><span class="lineno"> 420</span>  endfor</div><div class="line"><a name="l00421"></a><span class="lineno"> 421</span>  </div><div class="line"><a name="l00422"></a><span class="lineno"> 422</span>  return scans</div><div class="line"><a name="l00423"></a><span class="lineno"> 423</span> end</div><div class="line"><a name="l00424"></a><span class="lineno"> 424</span> </div><div class="line"><a name="l00440"></a><span class="lineno"><a class="line" href="pearl-pshell-import_8ipf.html#a4508bd507c4c935bd8463d9b2b84c6fc"> 440</a></span> function /s <a class="code" href="pearl-pshell-import_8ipf.html#a4508bd507c4c935bd8463d9b2b84c6fc">psh5_list_scan_datasets</a>(fileID, scanpath, [include_regions])</div><div class="line"><a name="l00441"></a><span class="lineno"> 441</span>  variable fileID</div><div class="line"><a name="l00442"></a><span class="lineno"> 442</span>  <span class="keywordtype">string</span> scanpath</div><div class="line"><a name="l00443"></a><span class="lineno"> 443</span>  variable include_regions</div><div class="line"><a name="l00444"></a><span class="lineno"> 444</span>  </div><div class="line"><a name="l00445"></a><span class="lineno"> 445</span>  if (ParamIsDefault(include_regions))</div><div class="line"><a name="l00446"></a><span class="lineno"> 446</span>  include_regions = 0</div><div class="line"><a name="l00447"></a><span class="lineno"> 447</span>  endif</div><div class="line"><a name="l00448"></a><span class="lineno"> 448</span>  <span class="keywordtype">string</span> result</div><div class="line"><a name="l00449"></a><span class="lineno"> 449</span>  </div><div class="line"><a name="l00450"></a><span class="lineno"> 450</span>  HDF5ListGroup /TYPE=2 /Z fileID, scanpath</div><div class="line"><a name="l00451"></a><span class="lineno"> 451</span>  result = S_HDF5ListGroup</div><div class="line"><a name="l00452"></a><span class="lineno"> 452</span>  </div><div class="line"><a name="l00453"></a><span class="lineno"> 453</span>  if (include_regions)</div><div class="line"><a name="l00454"></a><span class="lineno"> 454</span>  HDF5ListGroup /R /TYPE=2 /Z fileID, scanpath</div><div class="line"><a name="l00455"></a><span class="lineno"> 455</span>  variable n = ItemsInList(S_HDF5ListGroup)</div><div class="line"><a name="l00456"></a><span class="lineno"> 456</span>  variable i</div><div class="line"><a name="l00457"></a><span class="lineno"> 457</span>  <span class="keywordtype">string</span> ds</div><div class="line"><a name="l00458"></a><span class="lineno"> 458</span>  <span class="keywordtype">string</span> region_datasets</div><div class="line"><a name="l00459"></a><span class="lineno"> 459</span>  for (i = 0; i < n; i += 1)</div><div class="line"><a name="l00460"></a><span class="lineno"> 460</span>  ds = StringFromList(i, S_HDF5ListGroup)</div><div class="line"><a name="l00461"></a><span class="lineno"> 461</span>  if (StringMatch(ds, "region*<span class="comment">/*"))</span></div><div class="line"><a name="l00462"></a><span class="lineno"> 462</span> <span class="comment"> //region_datasets = psh5_list_scan_datasets(fileID, ReplaceString("//", scanpath + "/" + region, "/"), include_regions=0)</span></div><div class="line"><a name="l00463"></a><span class="lineno"> 463</span> <span class="comment"> result = AddListItem(ds, result, ";", inf)</span></div><div class="line"><a name="l00464"></a><span class="lineno"> 464</span> <span class="comment"> endif</span></div><div class="line"><a name="l00465"></a><span class="lineno"> 465</span> <span class="comment"> endfor</span></div><div class="line"><a name="l00466"></a><span class="lineno"> 466</span> <span class="comment"> endif</span></div><div class="line"><a name="l00467"></a><span class="lineno"> 467</span> <span class="comment"> </span></div><div class="line"><a name="l00468"></a><span class="lineno"> 468</span> <span class="comment"> return result</span></div><div class="line"><a name="l00469"></a><span class="lineno"> 469</span> <span class="comment">end</span></div><div class="line"><a name="l00470"></a><span class="lineno"> 470</span> <span class="comment"></span></div><div class="line"><a name="l00481"></a><span class="lineno"><a class="line" href="pearl-pshell-import_8ipf.html#acb317b57ef137d4d5da5938013dbe442"> 481</a></span> <span class="comment">function /s psh5_list_scan_regions(fileID, scanpath)</span></div><div class="line"><a name="l00482"></a><span class="lineno"> 482</span> <span class="comment"> variable fileID</span></div><div class="line"><a name="l00483"></a><span class="lineno"> 483</span> <span class="comment"> string scanpath</span></div><div class="line"><a name="l00484"></a><span class="lineno"> 484</span> <span class="comment"> </span></div><div class="line"><a name="l00485"></a><span class="lineno"> 485</span> <span class="comment"> HDF5ListGroup /TYPE=1 /Z fileID, scanpath</span></div><div class="line"><a name="l00486"></a><span class="lineno"> 486</span> <span class="comment"> variable n = ItemsInList(S_HDF5ListGroup)</span></div><div class="line"><a name="l00487"></a><span class="lineno"> 487</span> <span class="comment"> variable i</span></div><div class="line"><a name="l00488"></a><span class="lineno"> 488</span> <span class="comment"> string result = ""</span></div><div class="line"><a name="l00489"></a><span class="lineno"> 489</span> <span class="comment"> string s</span></div><div class="line"><a name="l00490"></a><span class="lineno"> 490</span> <span class="comment"> for (i = 0; i < n; i += 1)</span></div><div class="line"><a name="l00491"></a><span class="lineno"> 491</span> <span class="comment"> s = StringFromList(i, S_HDF5ListGroup)</span></div><div class="line"><a name="l00492"></a><span class="lineno"> 492</span> <span class="comment"> if (StringMatch(s, "region*"))</span></div><div class="line"><a name="l00493"></a><span class="lineno"> 493</span> <span class="comment"> result = AddListItem(s, result, ";", inf)</span></div><div class="line"><a name="l00494"></a><span class="lineno"> 494</span> <span class="comment"> endif</span></div><div class="line"><a name="l00495"></a><span class="lineno"> 495</span> <span class="comment"> endfor</span></div><div class="line"><a name="l00496"></a><span class="lineno"> 496</span> <span class="comment"> </span></div><div class="line"><a name="l00497"></a><span class="lineno"> 497</span> <span class="comment"> return result</span></div><div class="line"><a name="l00498"></a><span class="lineno"> 498</span> <span class="comment">end</span></div><div class="line"><a name="l00499"></a><span class="lineno"> 499</span> <span class="comment"></span></div><div class="line"><a name="l00514"></a><span class="lineno"><a class="line" href="pearl-pshell-import_8ipf.html#ad26b0b56d7ccd23547535091c9430569"> 514</a></span> <span class="comment">function /s psh5_load_scan_data(fileID, scanpath)</span></div><div class="line"><a name="l00515"></a><span class="lineno"> 515</span> <span class="comment"> variable fileID</span></div><div class="line"><a name="l00516"></a><span class="lineno"> 516</span> <span class="comment"> string scanpath</span></div><div class="line"><a name="l00517"></a><span class="lineno"> 517</span> <span class="comment"> </span></div><div class="line"><a name="l00518"></a><span class="lineno"> 518</span> <span class="comment"> string datasets = psh5_list_scan_datasets(fileID, scanpath, include_regions=1)</span></div><div class="line"><a name="l00519"></a><span class="lineno"> 519</span> <span class="comment"> variable nds = ItemsInList(datasets)</span></div><div class="line"><a name="l00520"></a><span class="lineno"> 520</span> <span class="comment"> variable ids</span></div><div class="line"><a name="l00521"></a><span class="lineno"> 521</span> <span class="comment"> string sds</span></div><div class="line"><a name="l00522"></a><span class="lineno"> 522</span> <span class="comment"> string sw</span></div><div class="line"><a name="l00523"></a><span class="lineno"> 523</span> <span class="comment"> string wavenames = ""</span></div><div class="line"><a name="l00524"></a><span class="lineno"> 524</span> <span class="comment"> for (ids = 0; ids < nds; ids += 1)</span></div><div class="line"><a name="l00525"></a><span class="lineno"> 525</span> <span class="comment"> sds = StringFromList(ids, datasets)</span></div><div class="line"><a name="l00526"></a><span class="lineno"> 526</span> <span class="comment"> sw = psh5_load_dataset(fileID, scanpath, sds, set_scale=0)</span></div><div class="line"><a name="l00527"></a><span class="lineno"> 527</span> <span class="comment"> wavenames = AddListItem(sw, wavenames, ";", inf)</span></div><div class="line"><a name="l00528"></a><span class="lineno"> 528</span> <span class="comment"> endfor</span></div><div class="line"><a name="l00529"></a><span class="lineno"> 529</span> <span class="comment"> </span></div><div class="line"><a name="l00530"></a><span class="lineno"> 530</span> <span class="comment"> return wavenames</span></div><div class="line"><a name="l00531"></a><span class="lineno"> 531</span> <span class="comment">end</span></div><div class="line"><a name="l00532"></a><span class="lineno"> 532</span> <span class="comment"></span></div><div class="line"><a name="l00554"></a><span class="lineno"><a class="line" href="pearl-pshell-import_8ipf.html#aec191d0167bbf606d24396f4658104b5"> 554</a></span> <span class="comment">function /s psh5_load_scan_attrs(fileID, scanpath, [attr_sets])</span></div><div class="line"><a name="l00555"></a><span class="lineno"> 555</span> <span class="comment"> variable fileID</span></div><div class="line"><a name="l00556"></a><span class="lineno"> 556</span> <span class="comment"> string scanpath</span></div><div class="line"><a name="l00557"></a><span class="lineno"> 557</span> <span class="comment"> variable attr_sets</span></div><div class="line"><a name="l00558"></a><span class="lineno"> 558</span> <span class="comment"></span></div><div class="line"><a name="l00559"></a><span class="lineno"> 559</span> <span class="comment"> if (ParamIsDefault(attr_sets))</span></div><div class="line"><a name="l00560"></a><span class="lineno"> 560</span> <span class="comment"> attr_sets = 1</span></div><div class="line"><a name="l00561"></a><span class="lineno"> 561</span> <span class="comment"> endif</span></div><div class="line"><a name="l00562"></a><span class="lineno"> 562</span> <span class="comment"></span></div><div class="line"><a name="l00563"></a><span class="lineno"> 563</span> <span class="comment"> string attr_path = ReplaceString("//", scanpath + "/attrs", "/")</span></div><div class="line"><a name="l00564"></a><span class="lineno"> 564</span> <span class="comment"> string attr_list = ""</span></div><div class="line"><a name="l00565"></a><span class="lineno"> 565</span> <span class="comment"> if (attr_sets & 1)</span></div><div class="line"><a name="l00566"></a><span class="lineno"> 566</span> <span class="comment"> HDF5ListGroup /TYPE=2 /Z fileID, attr_path</span></div><div class="line"><a name="l00567"></a><span class="lineno"> 567</span> <span class="comment"> if (!v_flag)</span></div><div class="line"><a name="l00568"></a><span class="lineno"> 568</span> <span class="comment"> attr_list = S_HDF5ListGroup</span></div><div class="line"><a name="l00569"></a><span class="lineno"> 569</span> <span class="comment"> endif</span></div><div class="line"><a name="l00570"></a><span class="lineno"> 570</span> <span class="comment"> endif</span></div><div class="line"><a name="l00571"></a><span class="lineno"> 571</span> <span class="comment"> </span></div><div class="line"><a name="l00572"></a><span class="lineno"> 572</span> <span class="comment"> variable ids</span></div><div class="line"><a name="l00573"></a><span class="lineno"> 573</span> <span class="comment"> variable nds</span></div><div class="line"><a name="l00574"></a><span class="lineno"> 574</span> <span class="comment"> string sds</span></div><div class="line"><a name="l00575"></a><span class="lineno"> 575</span> <span class="comment"></span></div><div class="line"><a name="l00576"></a><span class="lineno"> 576</span> <span class="comment"> if (attr_sets & 2)</span></div><div class="line"><a name="l00577"></a><span class="lineno"> 577</span> <span class="comment"> nds = ItemsInList(kScientaScalingDatasets, ";")</span></div><div class="line"><a name="l00578"></a><span class="lineno"> 578</span> <span class="comment"> for (ids = 0; ids < nds; ids += 1)</span></div><div class="line"><a name="l00579"></a><span class="lineno"> 579</span> <span class="comment"> sds = StringFromList(ids, kScientaScalingDatasets)</span></div><div class="line"><a name="l00580"></a><span class="lineno"> 580</span> <span class="comment"> if (WhichListItem(sds, attr_list) < 0)</span></div><div class="line"><a name="l00581"></a><span class="lineno"> 581</span> <span class="comment"> attr_list = AddListItem(sds, attr_list, ";", inf)</span></div><div class="line"><a name="l00582"></a><span class="lineno"> 582</span> <span class="comment"> endif</span></div><div class="line"><a name="l00583"></a><span class="lineno"> 583</span> <span class="comment"> endfor</span></div><div class="line"><a name="l00584"></a><span class="lineno"> 584</span> <span class="comment"> endif</span></div><div class="line"><a name="l00585"></a><span class="lineno"> 585</span> <span class="comment"></span></div><div class="line"><a name="l00586"></a><span class="lineno"> 586</span> <span class="comment"> nds = ItemsInList(attr_list, ";")</span></div><div class="line"><a name="l00587"></a><span class="lineno"> 587</span> <span class="comment"> string wavenames = ""</span></div><div class="line"><a name="l00588"></a><span class="lineno"> 588</span> <span class="comment"> for (ids = 0; ids < nds; ids += 1)</span></div><div class="line"><a name="l00589"></a><span class="lineno"> 589</span> <span class="comment"> sds = StringFromList(ids, attr_list, ";")</span></div><div class="line"><a name="l00590"></a><span class="lineno"> 590</span> <span class="comment"> HDF5LoadData /O /Q /Z fileID, attr_path + "/" + sds</span></div><div class="line"><a name="l00591"></a><span class="lineno"> 591</span> <span class="comment"> if (!v_flag)</span></div><div class="line"><a name="l00592"></a><span class="lineno"> 592</span> <span class="comment"> wavenames = AddListItem(s_wavenames, wavenames, ";", inf)</span></div><div class="line"><a name="l00593"></a><span class="lineno"> 593</span> <span class="comment"> endif</span></div><div class="line"><a name="l00594"></a><span class="lineno"> 594</span> <span class="comment"> endfor</span></div><div class="line"><a name="l00595"></a><span class="lineno"> 595</span> <span class="comment"> wavenames = ReplaceString(";;", wavenames, ";")</span></div><div class="line"><a name="l00596"></a><span class="lineno"> 596</span> <span class="comment"> </span></div><div class="line"><a name="l00597"></a><span class="lineno"> 597</span> <span class="comment"> return wavenames</span></div><div class="line"><a name="l00598"></a><span class="lineno"> 598</span> <span class="comment">end</span></div><div class="line"><a name="l00599"></a><span class="lineno"> 599</span> <span class="comment"></span></div><div class="line"><a name="l00625"></a><span class="lineno"><a class="line" href="pearl-pshell-import_8ipf.html#aa56c25d64b3e59f74d6dd92a599cce4f"> 625</a></span> <span class="comment">function /s psh5_load_scan_meta(fileID, scanpath)</span></div><div class="line"><a name="l00626"></a><span class="lineno"> 626</span> <span class="comment"> variable fileID</span></div><div class="line"><a name="l00627"></a><span class="lineno"> 627</span> <span class="comment"> string scanpath</span></div><div class="line"><a name="l00628"></a><span class="lineno"> 628</span> <span class="comment"> string wavenames = ""</span></div><div class="line"><a name="l00629"></a><span class="lineno"> 629</span> <span class="comment"></span></div><div class="line"><a name="l00630"></a><span class="lineno"> 630</span> <span class="comment"> HDF5LoadData /O /Q /Z /A="Dimensions" /N=ScanDimensions /TYPE=1 fileID, scanpath</span></div><div class="line"><a name="l00631"></a><span class="lineno"> 631</span> <span class="comment"> if (!v_flag)</span></div><div class="line"><a name="l00632"></a><span class="lineno"> 632</span> <span class="comment"> wavenames = AddListItem(s_wavenames, wavenames, ";", inf)</span></div><div class="line"><a name="l00633"></a><span class="lineno"> 633</span> <span class="comment"> else</span></div><div class="line"><a name="l00634"></a><span class="lineno"> 634</span> <span class="comment"> make /n=1 /o ScanDimensions</span></div><div class="line"><a name="l00635"></a><span class="lineno"> 635</span> <span class="comment"> ScanDimensions = 0</span></div><div class="line"><a name="l00636"></a><span class="lineno"> 636</span> <span class="comment"> wavenames = AddListItem("ScanDimensions", wavenames, ";", inf)</span></div><div class="line"><a name="l00637"></a><span class="lineno"> 637</span> <span class="comment"> endif</span></div><div class="line"><a name="l00638"></a><span class="lineno"> 638</span> <span class="comment"> HDF5LoadData /O /Q /Z /A="Readables" /N=ScanReadables /TYPE=1 fileID, scanpath</span></div><div class="line"><a name="l00639"></a><span class="lineno"> 639</span> <span class="comment"> if (!v_flag)</span></div><div class="line"><a name="l00640"></a><span class="lineno"> 640</span> <span class="comment"> wavenames = AddListItem(s_wavenames, wavenames, ";", inf)</span></div><div class="line"><a name="l00641"></a><span class="lineno"> 641</span> <span class="comment"> else</span></div><div class="line"><a name="l00642"></a><span class="lineno"> 642</span> <span class="comment"> make /n=1 /o /t ScanReadables</span></div><div class="line"><a name="l00643"></a><span class="lineno"> 643</span> <span class="comment"> ScanReadables[0] = "ScientaSpectrum"</span></div><div class="line"><a name="l00644"></a><span class="lineno"> 644</span> <span class="comment"> wavenames = AddListItem("ScanReadables", wavenames, ";", inf)</span></div><div class="line"><a name="l00645"></a><span class="lineno"> 645</span> <span class="comment"> endif</span></div><div class="line"><a name="l00646"></a><span class="lineno"> 646</span> <span class="comment"> HDF5LoadData /O /Q /Z /A="Writables" /N=ScanWritables /TYPE=1 fileID, scanpath</span></div><div class="line"><a name="l00647"></a><span class="lineno"> 647</span> <span class="comment"> if (!v_flag)</span></div><div class="line"><a name="l00648"></a><span class="lineno"> 648</span> <span class="comment"> wavenames = AddListItem(s_wavenames, wavenames, ";", inf)</span></div><div class="line"><a name="l00649"></a><span class="lineno"> 649</span> <span class="comment"> endif</span></div><div class="line"><a name="l00650"></a><span class="lineno"> 650</span> <span class="comment"> HDF5LoadData /O /Q /Z /A="Steps" /N=ScanSteps /TYPE=1 fileID, scanpath</span></div><div class="line"><a name="l00651"></a><span class="lineno"> 651</span> <span class="comment"> if (!v_flag)</span></div><div class="line"><a name="l00652"></a><span class="lineno"> 652</span> <span class="comment"> wavenames = AddListItem(s_wavenames, wavenames, ";", inf)</span></div><div class="line"><a name="l00653"></a><span class="lineno"> 653</span> <span class="comment"> endif</span></div><div class="line"><a name="l00654"></a><span class="lineno"> 654</span> <span class="comment"> wavenames = ReplaceString(";;", wavenames, ";")</span></div><div class="line"><a name="l00655"></a><span class="lineno"> 655</span> <span class="comment"></span></div><div class="line"><a name="l00656"></a><span class="lineno"> 656</span> <span class="comment"> // additional attributes from XPSSpectrum.py</span></div><div class="line"><a name="l00657"></a><span class="lineno"> 657</span> <span class="comment"> HDF5LoadData /O /Q /Z /A="Iterations" /N=ScanIterations /TYPE=1 fileID, scanpath</span></div><div class="line"><a name="l00658"></a><span class="lineno"> 658</span> <span class="comment"> if (!v_flag)</span></div><div class="line"><a name="l00659"></a><span class="lineno"> 659</span> <span class="comment"> wavenames = AddListItem(s_wavenames, wavenames, ";", inf)</span></div><div class="line"><a name="l00660"></a><span class="lineno"> 660</span> <span class="comment"> endif</span></div><div class="line"><a name="l00661"></a><span class="lineno"> 661</span> <span class="comment"> HDF5LoadData /O /Q /Z /A="Step Size" /N=ScanStepSize /TYPE=1 fileID, scanpath</span></div><div class="line"><a name="l00662"></a><span class="lineno"> 662</span> <span class="comment"> if (!v_flag)</span></div><div class="line"><a name="l00663"></a><span class="lineno"> 663</span> <span class="comment"> wavenames = AddListItem(s_wavenames, wavenames, ";", inf)</span></div><div class="line"><a name="l00664"></a><span class="lineno"> 664</span> <span class="comment"> endif</span></div><div class="line"><a name="l00665"></a><span class="lineno"> 665</span> <span class="comment"> HDF5LoadData /O /Q /Z /A="Step Time" /N=ScanStepTime /TYPE=1 fileID, scanpath</span></div><div class="line"><a name="l00666"></a><span class="lineno"> 666</span> <span class="comment"> if (!v_flag)</span></div><div class="line"><a name="l00667"></a><span class="lineno"> 667</span> <span class="comment"> wavenames = AddListItem(s_wavenames, wavenames, ";", inf)</span></div><div class="line"><a name="l00668"></a><span class="lineno"> 668</span> <span class="comment"> endif</span></div><div class="line"><a name="l00669"></a><span class="lineno"> 669</span> <span class="comment"></span></div><div class="line"><a name="l00670"></a><span class="lineno"> 670</span> <span class="comment"> return wavenames</span></div><div class="line"><a name="l00671"></a><span class="lineno"> 671</span> <span class="comment">end</span></div><div class="line"><a name="l00672"></a><span class="lineno"> 672</span> <span class="comment"></span></div><div class="line"><a name="l00706"></a><span class="lineno"><a class="line" href="pearl-pshell-import_8ipf.html#ac4dfb90b951d29b56501e904f5cc38aa"> 706</a></span> <span class="comment">function /s psh5_load_dataset(fileID, scanpath, datasetname, [set_scale])</span></div><div class="line"><a name="l00707"></a><span class="lineno"> 707</span> <span class="comment"> variable fileID</span></div><div class="line"><a name="l00708"></a><span class="lineno"> 708</span> <span class="comment"> string scanpath</span></div><div class="line"><a name="l00709"></a><span class="lineno"> 709</span> <span class="comment"> string datasetname</span></div><div class="line"><a name="l00710"></a><span class="lineno"> 710</span> <span class="comment"> variable set_scale</span></div><div class="line"><a name="l00711"></a><span class="lineno"> 711</span> <span class="comment"></span></div><div class="line"><a name="l00712"></a><span class="lineno"> 712</span> <span class="comment"> if (ParamIsDefault(set_scale))</span></div><div class="line"><a name="l00713"></a><span class="lineno"> 713</span> <span class="comment"> set_scale = 1</span></div><div class="line"><a name="l00714"></a><span class="lineno"> 714</span> <span class="comment"> endif</span></div><div class="line"><a name="l00715"></a><span class="lineno"> 715</span> <span class="comment"> </span></div><div class="line"><a name="l00716"></a><span class="lineno"> 716</span> <span class="comment"> dfref base_df = GetDataFolderDFR()</span></div><div class="line"><a name="l00717"></a><span class="lineno"> 717</span> <span class="comment"> </span></div><div class="line"><a name="l00718"></a><span class="lineno"> 718</span> <span class="comment"> string datasetpath</span></div><div class="line"><a name="l00719"></a><span class="lineno"> 719</span> <span class="comment"> datasetpath = scanpath + "/" + datasetname</span></div><div class="line"><a name="l00720"></a><span class="lineno"> 720</span> <span class="comment"> datasetpath = ReplaceString("//", datasetpath, "/")</span></div><div class="line"><a name="l00721"></a><span class="lineno"> 721</span> <span class="comment"> </span></div><div class="line"><a name="l00722"></a><span class="lineno"> 722</span> <span class="comment"> string regionname</span></div><div class="line"><a name="l00723"></a><span class="lineno"> 723</span> <span class="comment"> string regionpath</span></div><div class="line"><a name="l00724"></a><span class="lineno"> 724</span> <span class="comment"> if (ItemsInList(datasetname, "/") >= 2)</span></div><div class="line"><a name="l00725"></a><span class="lineno"> 725</span> <span class="comment"> regionname = StringFromList(0, datasetname, "/")</span></div><div class="line"><a name="l00726"></a><span class="lineno"> 726</span> <span class="comment"> regionpath = ReplaceString("//", scanpath + "/" + regionname, "/")</span></div><div class="line"><a name="l00727"></a><span class="lineno"> 727</span> <span class="comment"> datasetname = RemoveListItem(0, datasetname, "/")</span></div><div class="line"><a name="l00728"></a><span class="lineno"> 728</span> <span class="comment"> NewDataFolder /o/s $regionname</span></div><div class="line"><a name="l00729"></a><span class="lineno"> 729</span> <span class="comment"> else</span></div><div class="line"><a name="l00730"></a><span class="lineno"> 730</span> <span class="comment"> regionname = ""</span></div><div class="line"><a name="l00731"></a><span class="lineno"> 731</span> <span class="comment"> regionpath = scanpath</span></div><div class="line"><a name="l00732"></a><span class="lineno"> 732</span> <span class="comment"> endif</span></div><div class="line"><a name="l00733"></a><span class="lineno"> 733</span> <span class="comment"> </span></div><div class="line"><a name="l00734"></a><span class="lineno"> 734</span> <span class="comment"> STRUCT HDF5DataInfo di // Defined in HDF5 Browser.ipf.</span></div><div class="line"><a name="l00735"></a><span class="lineno"> 735</span> <span class="comment"> InitHDF5DataInfo(di)</span></div><div class="line"><a name="l00736"></a><span class="lineno"> 736</span> <span class="comment"> variable err = HDF5DatasetInfo(fileID, datasetpath, 0, di)</span></div><div class="line"><a name="l00737"></a><span class="lineno"> 737</span> <span class="comment"> if (err != 0)</span></div><div class="line"><a name="l00738"></a><span class="lineno"> 738</span> <span class="comment"> print "error accessing detector/data"</span></div><div class="line"><a name="l00739"></a><span class="lineno"> 739</span> <span class="comment"> return ""</span></div><div class="line"><a name="l00740"></a><span class="lineno"> 740</span> <span class="comment"> endif</span></div><div class="line"><a name="l00741"></a><span class="lineno"> 741</span> <span class="comment"> </span></div><div class="line"><a name="l00742"></a><span class="lineno"> 742</span> <span class="comment"> string dataname</span></div><div class="line"><a name="l00743"></a><span class="lineno"> 743</span> <span class="comment"> if (di.ndims < 2)</span></div><div class="line"><a name="l00744"></a><span class="lineno"> 744</span> <span class="comment"> HDF5LoadData /O /Q /Z fileID, datasetpath</span></div><div class="line"><a name="l00745"></a><span class="lineno"> 745</span> <span class="comment"> dataname = StringFromList(0, S_waveNames)</span></div><div class="line"><a name="l00746"></a><span class="lineno"> 746</span> <span class="comment"> else</span></div><div class="line"><a name="l00747"></a><span class="lineno"> 747</span> <span class="comment"> dataname = psh5_load_dataset_slabs(fileID, regionpath, datasetname)</span></div><div class="line"><a name="l00748"></a><span class="lineno"> 748</span> <span class="comment"> endif</span></div><div class="line"><a name="l00749"></a><span class="lineno"> 749</span> <span class="comment"> </span></div><div class="line"><a name="l00750"></a><span class="lineno"> 750</span> <span class="comment"> wave /z data = $dataname</span></div><div class="line"><a name="l00751"></a><span class="lineno"> 751</span> <span class="comment"> if (waveexists(data))</span></div><div class="line"><a name="l00752"></a><span class="lineno"> 752</span> <span class="comment"> psh5_load_dataset_meta(fileID, regionpath, datasetname, data)</span></div><div class="line"><a name="l00753"></a><span class="lineno"> 753</span> <span class="comment"> ps_set_dimlabels(data)</span></div><div class="line"><a name="l00754"></a><span class="lineno"> 754</span> <span class="comment"> if (set_scale)</span></div><div class="line"><a name="l00755"></a><span class="lineno"> 755</span> <span class="comment"> ps_scale_dataset(data)</span></div><div class="line"><a name="l00756"></a><span class="lineno"> 756</span> <span class="comment"> endif</span></div><div class="line"><a name="l00757"></a><span class="lineno"> 757</span> <span class="comment"> else</span></div><div class="line"><a name="l00758"></a><span class="lineno"> 758</span> <span class="comment"> dataname = ""</span></div><div class="line"><a name="l00759"></a><span class="lineno"> 759</span> <span class="comment"> endif</span></div><div class="line"><a name="l00760"></a><span class="lineno"> 760</span> <span class="comment"> </span></div><div class="line"><a name="l00761"></a><span class="lineno"> 761</span> <span class="comment"> setdatafolder base_df</span></div><div class="line"><a name="l00762"></a><span class="lineno"> 762</span> <span class="comment"> return dataname</span></div><div class="line"><a name="l00763"></a><span class="lineno"> 763</span> <span class="comment">end</span></div><div class="line"><a name="l00764"></a><span class="lineno"> 764</span> <span class="comment"></span></div><div class="line"><a name="l00778"></a><span class="lineno"><a class="line" href="pearl-pshell-import_8ipf.html#abb4afdef6ae4476c25a1ff77b17266c3"> 778</a></span> <span class="comment">static function /s select_dataset(file_datasets, pref_datasets)</span></div><div class="line"><a name="l00779"></a><span class="lineno"> 779</span> <span class="comment"> string file_datasets</span></div><div class="line"><a name="l00780"></a><span class="lineno"> 780</span> <span class="comment"> string pref_datasets</span></div><div class="line"><a name="l00781"></a><span class="lineno"> 781</span> <span class="comment"></span></div><div class="line"><a name="l00782"></a><span class="lineno"> 782</span> <span class="comment"> variable index</span></div><div class="line"><a name="l00783"></a><span class="lineno"> 783</span> <span class="comment"> variable nds = ItemsInList(file_datasets)</span></div><div class="line"><a name="l00784"></a><span class="lineno"> 784</span> <span class="comment"> variable ids</span></div><div class="line"><a name="l00785"></a><span class="lineno"> 785</span> <span class="comment"> string sds = ""</span></div><div class="line"><a name="l00786"></a><span class="lineno"> 786</span> <span class="comment"> string mds = ""</span></div><div class="line"><a name="l00787"></a><span class="lineno"> 787</span> <span class="comment"> variable np = ItemsInList(pref_datasets)</span></div><div class="line"><a name="l00788"></a><span class="lineno"> 788</span> <span class="comment"> variable ip</span></div><div class="line"><a name="l00789"></a><span class="lineno"> 789</span> <span class="comment"> string sp</span></div><div class="line"><a name="l00790"></a><span class="lineno"> 790</span> <span class="comment"> variable found = 0</span></div><div class="line"><a name="l00791"></a><span class="lineno"> 791</span> <span class="comment"> if (nds > 0)</span></div><div class="line"><a name="l00792"></a><span class="lineno"> 792</span> <span class="comment"> for (ip = 0; ip < np; ip += 1)</span></div><div class="line"><a name="l00793"></a><span class="lineno"> 793</span> <span class="comment"> for (ids = 0; ids < nds; ids += 1)</span></div><div class="line"><a name="l00794"></a><span class="lineno"> 794</span> <span class="comment"> sds = StringFromList(ids, file_datasets)</span></div><div class="line"><a name="l00795"></a><span class="lineno"> 795</span> <span class="comment"> index = ItemsInList(sds, "/") - 1</span></div><div class="line"><a name="l00796"></a><span class="lineno"> 796</span> <span class="comment"> mds = StringFromList(index, sds, "/")</span></div><div class="line"><a name="l00797"></a><span class="lineno"> 797</span> <span class="comment"> sp = StringFromList(ip, pref_datasets)</span></div><div class="line"><a name="l00798"></a><span class="lineno"> 798</span> <span class="comment"> if (StringMatch(mds, sp))</span></div><div class="line"><a name="l00799"></a><span class="lineno"> 799</span> <span class="comment"> found = 1</span></div><div class="line"><a name="l00800"></a><span class="lineno"> 800</span> <span class="comment"> break</span></div><div class="line"><a name="l00801"></a><span class="lineno"> 801</span> <span class="comment"> endif</span></div><div class="line"><a name="l00802"></a><span class="lineno"> 802</span> <span class="comment"> endfor</span></div><div class="line"><a name="l00803"></a><span class="lineno"> 803</span> <span class="comment"> if (found)</span></div><div class="line"><a name="l00804"></a><span class="lineno"> 804</span> <span class="comment"> break</span></div><div class="line"><a name="l00805"></a><span class="lineno"> 805</span> <span class="comment"> endif</span></div><div class="line"><a name="l00806"></a><span class="lineno"> 806</span> <span class="comment"> endfor</span></div><div class="line"><a name="l00807"></a><span class="lineno"> 807</span> <span class="comment"> if (!found)</span></div><div class="line"><a name="l00808"></a><span class="lineno"> 808</span> <span class="comment"> ids = 0</span></div><div class="line"><a name="l00809"></a><span class="lineno"> 809</span> <span class="comment"> sds = StringFromList(ids, file_datasets)</span></div><div class="line"><a name="l00810"></a><span class="lineno"> 810</span> <span class="comment"> endif</span></div><div class="line"><a name="l00811"></a><span class="lineno"> 811</span> <span class="comment"> endif</span></div><div class="line"><a name="l00812"></a><span class="lineno"> 812</span> <span class="comment"> </span></div><div class="line"><a name="l00813"></a><span class="lineno"> 813</span> <span class="comment"> return sds</span></div><div class="line"><a name="l00814"></a><span class="lineno"> 814</span> <span class="comment">end</span></div><div class="line"><a name="l00815"></a><span class="lineno"> 815</span> <span class="comment"></span></div><div class="line"><a name="l00840"></a><span class="lineno"><a class="line" href="pearl-pshell-import_8ipf.html#ad3b9354b137ba4f1bc3ed2e74f24dc88"> 840</a></span> <span class="comment">function /s psh5_load_scan_preview(fileID, scanpath, [set_scale, pref_datasets])</span></div><div class="line"><a name="l00841"></a><span class="lineno"> 841</span> <span class="comment"> variable fileID</span></div><div class="line"><a name="l00842"></a><span class="lineno"> 842</span> <span class="comment"> string scanpath</span></div><div class="line"><a name="l00843"></a><span class="lineno"> 843</span> <span class="comment"> variable set_scale</span></div><div class="line"><a name="l00844"></a><span class="lineno"> 844</span> <span class="comment"> string pref_datasets</span></div><div class="line"><a name="l00845"></a><span class="lineno"> 845</span> <span class="comment"></span></div><div class="line"><a name="l00846"></a><span class="lineno"> 846</span> <span class="comment"> if (ParamIsDefault(set_scale))</span></div><div class="line"><a name="l00847"></a><span class="lineno"> 847</span> <span class="comment"> set_scale = 1</span></div><div class="line"><a name="l00848"></a><span class="lineno"> 848</span> <span class="comment"> endif</span></div><div class="line"><a name="l00849"></a><span class="lineno"> 849</span> <span class="comment"> if (ParamIsDefault(pref_datasets) || (strlen(pref_datasets) == 0))</span></div><div class="line"><a name="l00850"></a><span class="lineno"> 850</span> <span class="comment"> pref_datasets = kPreviewDatasets</span></div><div class="line"><a name="l00851"></a><span class="lineno"> 851</span> <span class="comment"> endif</span></div><div class="line"><a name="l00852"></a><span class="lineno"> 852</span> <span class="comment"></span></div><div class="line"><a name="l00853"></a><span class="lineno"> 853</span> <span class="comment"> dfref saveDF = GetDataFolderDFR()</span></div><div class="line"><a name="l00854"></a><span class="lineno"> 854</span> <span class="comment"> dfref dataDF = saveDF</span></div><div class="line"><a name="l00855"></a><span class="lineno"> 855</span> <span class="comment"> </span></div><div class="line"><a name="l00856"></a><span class="lineno"> 856</span> <span class="comment"> string datasets = psh5_list_scan_datasets(fileID, scanpath, include_regions=1)</span></div><div class="line"><a name="l00857"></a><span class="lineno"> 857</span> <span class="comment"> string datasetname = select_dataset(datasets, pref_datasets)</span></div><div class="line"><a name="l00858"></a><span class="lineno"> 858</span> <span class="comment"> string datasetpath</span></div><div class="line"><a name="l00859"></a><span class="lineno"> 859</span> <span class="comment"> datasetpath = scanpath + "/" + datasetname</span></div><div class="line"><a name="l00860"></a><span class="lineno"> 860</span> <span class="comment"> datasetpath = ReplaceString("//", datasetpath, "/")</span></div><div class="line"><a name="l00861"></a><span class="lineno"> 861</span> <span class="comment"> </span></div><div class="line"><a name="l00862"></a><span class="lineno"> 862</span> <span class="comment"> STRUCT HDF5DataInfo di // Defined in HDF5 Browser.ipf.</span></div><div class="line"><a name="l00863"></a><span class="lineno"> 863</span> <span class="comment"> InitHDF5DataInfo(di)</span></div><div class="line"><a name="l00864"></a><span class="lineno"> 864</span> <span class="comment"> variable err = HDF5DatasetInfo(fileID, datasetpath, 0, di)</span></div><div class="line"><a name="l00865"></a><span class="lineno"> 865</span> <span class="comment"> if (err != 0)</span></div><div class="line"><a name="l00866"></a><span class="lineno"> 866</span> <span class="comment"> print "error accessing detector/data"</span></div><div class="line"><a name="l00867"></a><span class="lineno"> 867</span> <span class="comment"> return ""</span></div><div class="line"><a name="l00868"></a><span class="lineno"> 868</span> <span class="comment"> endif</span></div><div class="line"><a name="l00869"></a><span class="lineno"> 869</span> <span class="comment"> </span></div><div class="line"><a name="l00870"></a><span class="lineno"> 870</span> <span class="comment"> string dataname</span></div><div class="line"><a name="l00871"></a><span class="lineno"> 871</span> <span class="comment"> if (di.ndims < 2)</span></div><div class="line"><a name="l00872"></a><span class="lineno"> 872</span> <span class="comment"> HDF5LoadData /O /Q /Z fileID, datasetpath</span></div><div class="line"><a name="l00873"></a><span class="lineno"> 873</span> <span class="comment"> dataname = StringFromList(0, S_waveNames)</span></div><div class="line"><a name="l00874"></a><span class="lineno"> 874</span> <span class="comment"> wave /z data = $dataname</span></div><div class="line"><a name="l00875"></a><span class="lineno"> 875</span> <span class="comment"> if (waveexists(data))</span></div><div class="line"><a name="l00876"></a><span class="lineno"> 876</span> <span class="comment"> ps_set_dimlabels(data)</span></div><div class="line"><a name="l00877"></a><span class="lineno"> 877</span> <span class="comment"> endif</span></div><div class="line"><a name="l00878"></a><span class="lineno"> 878</span> <span class="comment"> else</span></div><div class="line"><a name="l00879"></a><span class="lineno"> 879</span> <span class="comment"> variable dim2start = 0</span></div><div class="line"><a name="l00880"></a><span class="lineno"> 880</span> <span class="comment"> variable dim2count = 1</span></div><div class="line"><a name="l00881"></a><span class="lineno"> 881</span> <span class="comment"> variable dim3start = 0</span></div><div class="line"><a name="l00882"></a><span class="lineno"> 882</span> <span class="comment"> variable dim3count = 1</span></div><div class="line"><a name="l00883"></a><span class="lineno"> 883</span> <span class="comment"> if (di.ndims >= 3)</span></div><div class="line"><a name="l00884"></a><span class="lineno"> 884</span> <span class="comment"> dim2start = floor(di.dims[2] / 2)</span></div><div class="line"><a name="l00885"></a><span class="lineno"> 885</span> <span class="comment"> dim2count = 1</span></div><div class="line"><a name="l00886"></a><span class="lineno"> 886</span> <span class="comment"> endif</span></div><div class="line"><a name="l00887"></a><span class="lineno"> 887</span> <span class="comment"> if (di.ndims >= 4)</span></div><div class="line"><a name="l00888"></a><span class="lineno"> 888</span> <span class="comment"> dim3start = floor(di.dims[3] / 2)</span></div><div class="line"><a name="l00889"></a><span class="lineno"> 889</span> <span class="comment"> dim3count = 1</span></div><div class="line"><a name="l00890"></a><span class="lineno"> 890</span> <span class="comment"> endif</span></div><div class="line"><a name="l00891"></a><span class="lineno"> 891</span> <span class="comment"> </span></div><div class="line"><a name="l00892"></a><span class="lineno"> 892</span> <span class="comment"> dataname = psh5_load_dataset_slab(fileID, scanpath, datasetname, dim2start, dim2count, dim3start, dim3count)</span></div><div class="line"><a name="l00893"></a><span class="lineno"> 893</span> <span class="comment"> endif</span></div><div class="line"><a name="l00894"></a><span class="lineno"> 894</span> <span class="comment"> </span></div><div class="line"><a name="l00895"></a><span class="lineno"> 895</span> <span class="comment"> wave /z data = $dataname</span></div><div class="line"><a name="l00896"></a><span class="lineno"> 896</span> <span class="comment"> if (waveexists(data))</span></div><div class="line"><a name="l00897"></a><span class="lineno"> 897</span> <span class="comment"> if (set_scale)</span></div><div class="line"><a name="l00898"></a><span class="lineno"> 898</span> <span class="comment"> setdatafolder dataDF</span></div><div class="line"><a name="l00899"></a><span class="lineno"> 899</span> <span class="comment"> string positioners</span></div><div class="line"><a name="l00900"></a><span class="lineno"> 900</span> <span class="comment"> string positioner</span></div><div class="line"><a name="l00901"></a><span class="lineno"> 901</span> <span class="comment"> string positionerpath</span></div><div class="line"><a name="l00902"></a><span class="lineno"> 902</span> <span class="comment"> positioners = psh5_load_scan_meta(fileID, scanpath)</span></div><div class="line"><a name="l00903"></a><span class="lineno"> 903</span> <span class="comment"> wave /t /z ScanWritables</span></div><div class="line"><a name="l00904"></a><span class="lineno"> 904</span> <span class="comment"> if (waveexists(ScanWritables) && (numpnts(ScanWritables) >= 1))</span></div><div class="line"><a name="l00905"></a><span class="lineno"> 905</span> <span class="comment"> positioner = ScanWritables[0]</span></div><div class="line"><a name="l00906"></a><span class="lineno"> 906</span> <span class="comment"> if (strlen(positioner) > 0)</span></div><div class="line"><a name="l00907"></a><span class="lineno"> 907</span> <span class="comment"> positionerpath = scanpath + "/" + positioner</span></div><div class="line"><a name="l00908"></a><span class="lineno"> 908</span> <span class="comment"> positionerpath = ReplaceString("//", positionerpath, "/")</span></div><div class="line"><a name="l00909"></a><span class="lineno"> 909</span> <span class="comment"> HDF5LoadData /O /Q /Z fileID, positionerpath</span></div><div class="line"><a name="l00910"></a><span class="lineno"> 910</span> <span class="comment"> endif</span></div><div class="line"><a name="l00911"></a><span class="lineno"> 911</span> <span class="comment"> endif</span></div><div class="line"><a name="l00912"></a><span class="lineno"> 912</span> <span class="comment"> </span></div><div class="line"><a name="l00913"></a><span class="lineno"> 913</span> <span class="comment"> setdatafolder dataDF</span></div><div class="line"><a name="l00914"></a><span class="lineno"> 914</span> <span class="comment"> newdatafolder /o/s attr</span></div><div class="line"><a name="l00915"></a><span class="lineno"> 915</span> <span class="comment"> psh5_load_scan_attrs(fileID, scanpath, attr_sets=2)</span></div><div class="line"><a name="l00916"></a><span class="lineno"> 916</span> <span class="comment"> setdatafolder dataDF</span></div><div class="line"><a name="l00917"></a><span class="lineno"> 917</span> <span class="comment"> ps_scale_dataset(data)</span></div><div class="line"><a name="l00918"></a><span class="lineno"> 918</span> <span class="comment"> endif</span></div><div class="line"><a name="l00919"></a><span class="lineno"> 919</span> <span class="comment"> else</span></div><div class="line"><a name="l00920"></a><span class="lineno"> 920</span> <span class="comment"> dataname = ""</span></div><div class="line"><a name="l00921"></a><span class="lineno"> 921</span> <span class="comment"> endif</span></div><div class="line"><a name="l00922"></a><span class="lineno"> 922</span> <span class="comment"></span></div><div class="line"><a name="l00923"></a><span class="lineno"> 923</span> <span class="comment"> return dataname</span></div><div class="line"><a name="l00924"></a><span class="lineno"> 924</span> <span class="comment">end</span></div><div class="line"><a name="l00925"></a><span class="lineno"> 925</span> <span class="comment"></span></div><div class="line"><a name="l00953"></a><span class="lineno"><a class="line" href="pearl-pshell-import_8ipf.html#a83804ba9637debed6ef8b13e7b9b19e0"> 953</a></span> <span class="comment">function /s psh5_load_scan_section(fileID, scanpath, dim, [set_scale, pref_datasets])</span></div><div class="line"><a name="l00954"></a><span class="lineno"> 954</span> <span class="comment"> variable fileID</span></div><div class="line"><a name="l00955"></a><span class="lineno"> 955</span> <span class="comment"> string scanpath</span></div><div class="line"><a name="l00956"></a><span class="lineno"> 956</span> <span class="comment"> variable dim</span></div><div class="line"><a name="l00957"></a><span class="lineno"> 957</span> <span class="comment"> variable set_scale</span></div><div class="line"><a name="l00958"></a><span class="lineno"> 958</span> <span class="comment"> string pref_datasets</span></div><div class="line"><a name="l00959"></a><span class="lineno"> 959</span> <span class="comment"></span></div><div class="line"><a name="l00960"></a><span class="lineno"> 960</span> <span class="comment"> // select first dimension (future argument)</span></div><div class="line"><a name="l00961"></a><span class="lineno"> 961</span> <span class="comment"> // 0 = first dimension is x axis (energy of scienta image)</span></div><div class="line"><a name="l00962"></a><span class="lineno"> 962</span> <span class="comment"> dim = 0</span></div><div class="line"><a name="l00963"></a><span class="lineno"> 963</span> <span class="comment"> </span></div><div class="line"><a name="l00964"></a><span class="lineno"> 964</span> <span class="comment"> if (ParamIsDefault(set_scale))</span></div><div class="line"><a name="l00965"></a><span class="lineno"> 965</span> <span class="comment"> set_scale = 1</span></div><div class="line"><a name="l00966"></a><span class="lineno"> 966</span> <span class="comment"> endif</span></div><div class="line"><a name="l00967"></a><span class="lineno"> 967</span> <span class="comment"> if (ParamIsDefault(pref_datasets) || (strlen(pref_datasets) == 0))</span></div><div class="line"><a name="l00968"></a><span class="lineno"> 968</span> <span class="comment"> pref_datasets = kPreviewDatasets</span></div><div class="line"><a name="l00969"></a><span class="lineno"> 969</span> <span class="comment"> endif</span></div><div class="line"><a name="l00970"></a><span class="lineno"> 970</span> <span class="comment"></span></div><div class="line"><a name="l00971"></a><span class="lineno"> 971</span> <span class="comment"> dfref saveDF = GetDataFolderDFR()</span></div><div class="line"><a name="l00972"></a><span class="lineno"> 972</span> <span class="comment"> dfref dataDF = saveDF</span></div><div class="line"><a name="l00973"></a><span class="lineno"> 973</span> <span class="comment"> </span></div><div class="line"><a name="l00974"></a><span class="lineno"> 974</span> <span class="comment"> string datasets = psh5_list_scan_datasets(fileID, scanpath)</span></div><div class="line"><a name="l00975"></a><span class="lineno"> 975</span> <span class="comment"> string datasetname = select_dataset(datasets, pref_datasets)</span></div><div class="line"><a name="l00976"></a><span class="lineno"> 976</span> <span class="comment"> string datasetpath</span></div><div class="line"><a name="l00977"></a><span class="lineno"> 977</span> <span class="comment"> datasetpath = scanpath + "/" + datasetname</span></div><div class="line"><a name="l00978"></a><span class="lineno"> 978</span> <span class="comment"> datasetpath = ReplaceString("//", datasetpath, "/")</span></div><div class="line"><a name="l00979"></a><span class="lineno"> 979</span> <span class="comment"> string dataname = StringFromList(ItemsInList(datasetpath, "/") - 1, datasetpath, "/")</span></div><div class="line"><a name="l00980"></a><span class="lineno"> 980</span> <span class="comment"> string destname = dataname[0,29] + num2str(dim)</span></div><div class="line"><a name="l00981"></a><span class="lineno"> 981</span> <span class="comment"> </span></div><div class="line"><a name="l00982"></a><span class="lineno"> 982</span> <span class="comment"> STRUCT HDF5DataInfo di // Defined in HDF5 Browser.ipf.</span></div><div class="line"><a name="l00983"></a><span class="lineno"> 983</span> <span class="comment"> InitHDF5DataInfo(di)</span></div><div class="line"><a name="l00984"></a><span class="lineno"> 984</span> <span class="comment"> variable err = HDF5DatasetInfo(fileID, datasetpath, 0, di)</span></div><div class="line"><a name="l00985"></a><span class="lineno"> 985</span> <span class="comment"> if (err != 0)</span></div><div class="line"><a name="l00986"></a><span class="lineno"> 986</span> <span class="comment"> print "error accessing detector/data"</span></div><div class="line"><a name="l00987"></a><span class="lineno"> 987</span> <span class="comment"> return ""</span></div><div class="line"><a name="l00988"></a><span class="lineno"> 988</span> <span class="comment"> elseif (di.ndims != 3)</span></div><div class="line"><a name="l00989"></a><span class="lineno"> 989</span> <span class="comment"> print "error: rank of dataset != 3"</span></div><div class="line"><a name="l00990"></a><span class="lineno"> 990</span> <span class="comment"> return ""</span></div><div class="line"><a name="l00991"></a><span class="lineno"> 991</span> <span class="comment"> endif</span></div><div class="line"><a name="l00992"></a><span class="lineno"> 992</span> <span class="comment"> </span></div><div class="line"><a name="l00993"></a><span class="lineno"> 993</span> <span class="comment"> variable idx, idy, idz, idt</span></div><div class="line"><a name="l00994"></a><span class="lineno"> 994</span> <span class="comment"> variable transpose = WhichListItem(dataname, kTransposedDatasets) >= 0</span></div><div class="line"><a name="l00995"></a><span class="lineno"> 995</span> <span class="comment"> if (transpose)</span></div><div class="line"><a name="l00996"></a><span class="lineno"> 996</span> <span class="comment"> idx = 1</span></div><div class="line"><a name="l00997"></a><span class="lineno"> 997</span> <span class="comment"> idy = 0</span></div><div class="line"><a name="l00998"></a><span class="lineno"> 998</span> <span class="comment"> else</span></div><div class="line"><a name="l00999"></a><span class="lineno"> 999</span> <span class="comment"> idx = 0</span></div><div class="line"><a name="l01000"></a><span class="lineno"> 1000</span> <span class="comment"> idy = 1</span></div><div class="line"><a name="l01001"></a><span class="lineno"> 1001</span> <span class="comment"> endif</span></div><div class="line"><a name="l01002"></a><span class="lineno"> 1002</span> <span class="comment"> idz = 2</span></div><div class="line"><a name="l01003"></a><span class="lineno"> 1003</span> <span class="comment"> idt = 3</span></div><div class="line"><a name="l01004"></a><span class="lineno"> 1004</span> <span class="comment"></span></div><div class="line"><a name="l01005"></a><span class="lineno"> 1005</span> <span class="comment"> variable nx, ny, nz</span></div><div class="line"><a name="l01006"></a><span class="lineno"> 1006</span> <span class="comment"> nx = di.dims[idx]</span></div><div class="line"><a name="l01007"></a><span class="lineno"> 1007</span> <span class="comment"> ny = di.dims[idy]</span></div><div class="line"><a name="l01008"></a><span class="lineno"> 1008</span> <span class="comment"> nz = di.dims[idz]</span></div><div class="line"><a name="l01009"></a><span class="lineno"> 1009</span> <span class="comment"></span></div><div class="line"><a name="l01010"></a><span class="lineno"> 1010</span> <span class="comment"> HDF5MakeHyperslabWave("slab", max(di.ndims, 4))</span></div><div class="line"><a name="l01011"></a><span class="lineno"> 1011</span> <span class="comment"> wave slab</span></div><div class="line"><a name="l01012"></a><span class="lineno"> 1012</span> <span class="comment"> slab[][%Start] = 0</span></div><div class="line"><a name="l01013"></a><span class="lineno"> 1013</span> <span class="comment"> slab[][%Stride] = 1</span></div><div class="line"><a name="l01014"></a><span class="lineno"> 1014</span> <span class="comment"> slab[][%Count] = 1</span></div><div class="line"><a name="l01015"></a><span class="lineno"> 1015</span> <span class="comment"> slab[][%Block] = 1</span></div><div class="line"><a name="l01016"></a><span class="lineno"> 1016</span> <span class="comment"> </span></div><div class="line"><a name="l01017"></a><span class="lineno"> 1017</span> <span class="comment"> if (dim == 0)</span></div><div class="line"><a name="l01018"></a><span class="lineno"> 1018</span> <span class="comment"> slab[idy][%Start] = floor(ny / 2)</span></div><div class="line"><a name="l01019"></a><span class="lineno"> 1019</span> <span class="comment"> slab[idx][%Block] = nx</span></div><div class="line"><a name="l01020"></a><span class="lineno"> 1020</span> <span class="comment"> make /n=(nx,nz) /o $destname</span></div><div class="line"><a name="l01021"></a><span class="lineno"> 1021</span> <span class="comment"> else</span></div><div class="line"><a name="l01022"></a><span class="lineno"> 1022</span> <span class="comment"> slab[idx][%Start] = floor(nx / 2)</span></div><div class="line"><a name="l01023"></a><span class="lineno"> 1023</span> <span class="comment"> slab[idy][%Block] = ny</span></div><div class="line"><a name="l01024"></a><span class="lineno"> 1024</span> <span class="comment"> make /n=(ny,nz) /o $destname</span></div><div class="line"><a name="l01025"></a><span class="lineno"> 1025</span> <span class="comment"> endif</span></div><div class="line"><a name="l01026"></a><span class="lineno"> 1026</span> <span class="comment"> slab[idz][%Block] = nz</span></div><div class="line"><a name="l01027"></a><span class="lineno"> 1027</span> <span class="comment"> wave data = $destname</span></div><div class="line"><a name="l01028"></a><span class="lineno"> 1028</span> <span class="comment"> data = 0</span></div><div class="line"><a name="l01029"></a><span class="lineno"> 1029</span> <span class="comment"></span></div><div class="line"><a name="l01030"></a><span class="lineno"> 1030</span> <span class="comment"> HDF5LoadData /O /Q /Z /SLAB=slab /N=slabdata fileID, datasetpath</span></div><div class="line"><a name="l01031"></a><span class="lineno"> 1031</span> <span class="comment"> if (!v_flag)</span></div><div class="line"><a name="l01032"></a><span class="lineno"> 1032</span> <span class="comment"> wave slabdata</span></div><div class="line"><a name="l01033"></a><span class="lineno"> 1033</span> <span class="comment"> if (transpose)</span></div><div class="line"><a name="l01034"></a><span class="lineno"> 1034</span> <span class="comment"> data += slabdata[0][p][q][0]</span></div><div class="line"><a name="l01035"></a><span class="lineno"> 1035</span> <span class="comment"> else</span></div><div class="line"><a name="l01036"></a><span class="lineno"> 1036</span> <span class="comment"> data += slabdata[p][0][q][0]</span></div><div class="line"><a name="l01037"></a><span class="lineno"> 1037</span> <span class="comment"> endif</span></div><div class="line"><a name="l01038"></a><span class="lineno"> 1038</span> <span class="comment"> endif</span></div><div class="line"><a name="l01039"></a><span class="lineno"> 1039</span> <span class="comment"> killwaves /z slab, slabdata</span></div><div class="line"><a name="l01040"></a><span class="lineno"> 1040</span> <span class="comment"> </span></div><div class="line"><a name="l01041"></a><span class="lineno"> 1041</span> <span class="comment"> if (set_scale)</span></div><div class="line"><a name="l01042"></a><span class="lineno"> 1042</span> <span class="comment"> make /n=(1,1,1) /free dummy</span></div><div class="line"><a name="l01043"></a><span class="lineno"> 1043</span> <span class="comment"> ps_set_dimlabels2(dummy, dataname)</span></div><div class="line"><a name="l01044"></a><span class="lineno"> 1044</span> <span class="comment"> setdimlabel 0, -1, $GetDimLabel(dummy, dim, -1), data</span></div><div class="line"><a name="l01045"></a><span class="lineno"> 1045</span> <span class="comment"> setdimlabel 1, -1, $kScanDimLabel, data </span></div><div class="line"><a name="l01046"></a><span class="lineno"> 1046</span> <span class="comment"> </span></div><div class="line"><a name="l01047"></a><span class="lineno"> 1047</span> <span class="comment"> setdatafolder dataDF</span></div><div class="line"><a name="l01048"></a><span class="lineno"> 1048</span> <span class="comment"> string positioners</span></div><div class="line"><a name="l01049"></a><span class="lineno"> 1049</span> <span class="comment"> string positioner</span></div><div class="line"><a name="l01050"></a><span class="lineno"> 1050</span> <span class="comment"> string positionerpath</span></div><div class="line"><a name="l01051"></a><span class="lineno"> 1051</span> <span class="comment"> positioners = psh5_load_scan_meta(fileID, scanpath)</span></div><div class="line"><a name="l01052"></a><span class="lineno"> 1052</span> <span class="comment"> wave /t /z ScanWritables</span></div><div class="line"><a name="l01053"></a><span class="lineno"> 1053</span> <span class="comment"> if (waveexists(ScanWritables) && (numpnts(ScanWritables) >= 1))</span></div><div class="line"><a name="l01054"></a><span class="lineno"> 1054</span> <span class="comment"> positioner = ScanWritables[0]</span></div><div class="line"><a name="l01055"></a><span class="lineno"> 1055</span> <span class="comment"> if (strlen(positioner) > 0)</span></div><div class="line"><a name="l01056"></a><span class="lineno"> 1056</span> <span class="comment"> positionerpath = scanpath + "/" + positioner</span></div><div class="line"><a name="l01057"></a><span class="lineno"> 1057</span> <span class="comment"> positionerpath = ReplaceString("//", positionerpath, "/")</span></div><div class="line"><a name="l01058"></a><span class="lineno"> 1058</span> <span class="comment"> HDF5LoadData /O /Q /Z fileID, positionerpath</span></div><div class="line"><a name="l01059"></a><span class="lineno"> 1059</span> <span class="comment"> endif</span></div><div class="line"><a name="l01060"></a><span class="lineno"> 1060</span> <span class="comment"> endif</span></div><div class="line"><a name="l01061"></a><span class="lineno"> 1061</span> <span class="comment"> </span></div><div class="line"><a name="l01062"></a><span class="lineno"> 1062</span> <span class="comment"> setdatafolder dataDF</span></div><div class="line"><a name="l01063"></a><span class="lineno"> 1063</span> <span class="comment"> newdatafolder /o/s attr</span></div><div class="line"><a name="l01064"></a><span class="lineno"> 1064</span> <span class="comment"> killwaves /a/z</span></div><div class="line"><a name="l01065"></a><span class="lineno"> 1065</span> <span class="comment"> psh5_load_scan_attrs(fileID, scanpath, attr_sets=2)</span></div><div class="line"><a name="l01066"></a><span class="lineno"> 1066</span> <span class="comment"> setdatafolder dataDF</span></div><div class="line"><a name="l01067"></a><span class="lineno"> 1067</span> <span class="comment"> ps_scale_dataset(data)</span></div><div class="line"><a name="l01068"></a><span class="lineno"> 1068</span> <span class="comment"> endif</span></div><div class="line"><a name="l01069"></a><span class="lineno"> 1069</span> <span class="comment"></span></div><div class="line"><a name="l01070"></a><span class="lineno"> 1070</span> <span class="comment"> return destname</span></div><div class="line"><a name="l01071"></a><span class="lineno"> 1071</span> <span class="comment">end</span></div><div class="line"><a name="l01072"></a><span class="lineno"> 1072</span> <span class="comment"></span></div><div class="line"><a name="l01091"></a><span class="lineno"><a class="line" href="pearl-pshell-import_8ipf.html#afde787a00a18dc8c63b100d8ac7d992f"> 1091</a></span> <span class="comment">function psh5_load_dataset_meta(fileID, datapath, datasetname, datawave)</span></div><div class="line"><a name="l01092"></a><span class="lineno"> 1092</span> <span class="comment"> variable fileID</span></div><div class="line"><a name="l01093"></a><span class="lineno"> 1093</span> <span class="comment"> string datapath</span></div><div class="line"><a name="l01094"></a><span class="lineno"> 1094</span> <span class="comment"> string datasetname</span></div><div class="line"><a name="l01095"></a><span class="lineno"> 1095</span> <span class="comment"> wave datawave</span></div><div class="line"><a name="l01096"></a><span class="lineno"> 1096</span> <span class="comment"></span></div><div class="line"><a name="l01097"></a><span class="lineno"> 1097</span> <span class="comment"> dfref saveDF = GetDataFolderDFR()</span></div><div class="line"><a name="l01098"></a><span class="lineno"> 1098</span> <span class="comment"> SetDataFolder NewFreeDataFolder()</span></div><div class="line"><a name="l01099"></a><span class="lineno"> 1099</span> <span class="comment"></span></div><div class="line"><a name="l01100"></a><span class="lineno"> 1100</span> <span class="comment"> string datasetpath = datapath + "/" + datasetname</span></div><div class="line"><a name="l01101"></a><span class="lineno"> 1101</span> <span class="comment"> datasetpath = ReplaceString("//", datasetpath, "/")</span></div><div class="line"><a name="l01102"></a><span class="lineno"> 1102</span> <span class="comment"> string wnote</span></div><div class="line"><a name="l01103"></a><span class="lineno"> 1103</span> <span class="comment"> </span></div><div class="line"><a name="l01104"></a><span class="lineno"> 1104</span> <span class="comment"> HDF5LoadData /O /Q /Z /A="Writable Dimension" /N=WriteDim fileID, datasetpath</span></div><div class="line"><a name="l01105"></a><span class="lineno"> 1105</span> <span class="comment"> if (!v_flag)</span></div><div class="line"><a name="l01106"></a><span class="lineno"> 1106</span> <span class="comment"> wave WriteDim</span></div><div class="line"><a name="l01107"></a><span class="lineno"> 1107</span> <span class="comment"> // scan dimension starts at 1</span></div><div class="line"><a name="l01108"></a><span class="lineno"> 1108</span> <span class="comment"> sprintf wnote, "ScanDimension=%u", WriteDim[0]</span></div><div class="line"><a name="l01109"></a><span class="lineno"> 1109</span> <span class="comment"> Note datawave, wnote</span></div><div class="line"><a name="l01110"></a><span class="lineno"> 1110</span> <span class="comment"> endif</span></div><div class="line"><a name="l01111"></a><span class="lineno"> 1111</span> <span class="comment"> </span></div><div class="line"><a name="l01112"></a><span class="lineno"> 1112</span> <span class="comment"> HDF5LoadData /O /Q /Z /A="Writable Index" /N=WriteIndex fileID, datasetpath</span></div><div class="line"><a name="l01113"></a><span class="lineno"> 1113</span> <span class="comment"> if (!v_flag)</span></div><div class="line"><a name="l01114"></a><span class="lineno"> 1114</span> <span class="comment"> wave WriteIndex</span></div><div class="line"><a name="l01115"></a><span class="lineno"> 1115</span> <span class="comment"> sprintf wnote, "WriteableIndex=%u", WriteIndex[0]</span></div><div class="line"><a name="l01116"></a><span class="lineno"> 1116</span> <span class="comment"> Note datawave, wnote</span></div><div class="line"><a name="l01117"></a><span class="lineno"> 1117</span> <span class="comment"> endif</span></div><div class="line"><a name="l01118"></a><span class="lineno"> 1118</span> <span class="comment"> </span></div><div class="line"><a name="l01119"></a><span class="lineno"> 1119</span> <span class="comment"> HDF5LoadData /O /Q /Z /A="Readable Index" /N=ReadIndex fileID, datasetpath</span></div><div class="line"><a name="l01120"></a><span class="lineno"> 1120</span> <span class="comment"> if (!v_flag)</span></div><div class="line"><a name="l01121"></a><span class="lineno"> 1121</span> <span class="comment"> wave ReadIndex</span></div><div class="line"><a name="l01122"></a><span class="lineno"> 1122</span> <span class="comment"> sprintf wnote, "ReadableIndex=%u", ReadIndex[0]</span></div><div class="line"><a name="l01123"></a><span class="lineno"> 1123</span> <span class="comment"> Note datawave, wnote</span></div><div class="line"><a name="l01124"></a><span class="lineno"> 1124</span> <span class="comment"> endif</span></div><div class="line"><a name="l01125"></a><span class="lineno"> 1125</span> <span class="comment"></span></div><div class="line"><a name="l01126"></a><span class="lineno"> 1126</span> <span class="comment"> setdatafolder saveDF </span></div><div class="line"><a name="l01127"></a><span class="lineno"> 1127</span> <span class="comment"> return 0</span></div><div class="line"><a name="l01128"></a><span class="lineno"> 1128</span> <span class="comment">end</span></div><div class="line"><a name="l01129"></a><span class="lineno"> 1129</span> <span class="comment"></span></div><div class="line"><a name="l01148"></a><span class="lineno"><a class="line" href="pearl-pshell-import_8ipf.html#a2972587ec82cc2a261b8119a582b4215"> 1148</a></span> <span class="comment">function /s psh5_load_dataset_slabs(fileID, datapath, datasetname, [progress])</span></div><div class="line"><a name="l01149"></a><span class="lineno"> 1149</span> <span class="comment"> variable fileID</span></div><div class="line"><a name="l01150"></a><span class="lineno"> 1150</span> <span class="comment"> string datapath</span></div><div class="line"><a name="l01151"></a><span class="lineno"> 1151</span> <span class="comment"> string datasetname</span></div><div class="line"><a name="l01152"></a><span class="lineno"> 1152</span> <span class="comment"> variable progress</span></div><div class="line"><a name="l01153"></a><span class="lineno"> 1153</span> <span class="comment"> </span></div><div class="line"><a name="l01154"></a><span class="lineno"> 1154</span> <span class="comment"> if (ParamIsDefault(progress))</span></div><div class="line"><a name="l01155"></a><span class="lineno"> 1155</span> <span class="comment"> progress = 1</span></div><div class="line"><a name="l01156"></a><span class="lineno"> 1156</span> <span class="comment"> endif</span></div><div class="line"><a name="l01157"></a><span class="lineno"> 1157</span> <span class="comment"></span></div><div class="line"><a name="l01158"></a><span class="lineno"> 1158</span> <span class="comment"> variable result = 0</span></div><div class="line"><a name="l01159"></a><span class="lineno"> 1159</span> <span class="comment"> string datasetpath</span></div><div class="line"><a name="l01160"></a><span class="lineno"> 1160</span> <span class="comment"> string datawavename</span></div><div class="line"><a name="l01161"></a><span class="lineno"> 1161</span> <span class="comment"> datasetpath = datapath + "/" + datasetname</span></div><div class="line"><a name="l01162"></a><span class="lineno"> 1162</span> <span class="comment"> datasetpath = ReplaceString("//", datasetpath, "/")</span></div><div class="line"><a name="l01163"></a><span class="lineno"> 1163</span> <span class="comment"> datawavename = StringFromList(ItemsInList(datasetpath, "/") - 1, datasetpath, "/")</span></div><div class="line"><a name="l01164"></a><span class="lineno"> 1164</span> <span class="comment"> </span></div><div class="line"><a name="l01165"></a><span class="lineno"> 1165</span> <span class="comment"> STRUCT HDF5DataInfo di // Defined in HDF5 Browser.ipf.</span></div><div class="line"><a name="l01166"></a><span class="lineno"> 1166</span> <span class="comment"> InitHDF5DataInfo(di)</span></div><div class="line"><a name="l01167"></a><span class="lineno"> 1167</span> <span class="comment"> variable err = HDF5DatasetInfo(fileID, datasetpath, 0, di)</span></div><div class="line"><a name="l01168"></a><span class="lineno"> 1168</span> <span class="comment"> if (err != 0)</span></div><div class="line"><a name="l01169"></a><span class="lineno"> 1169</span> <span class="comment"> print "error accessing detector/data"</span></div><div class="line"><a name="l01170"></a><span class="lineno"> 1170</span> <span class="comment"> return ""</span></div><div class="line"><a name="l01171"></a><span class="lineno"> 1171</span> <span class="comment"> endif</span></div><div class="line"><a name="l01172"></a><span class="lineno"> 1172</span> <span class="comment"> if (di.ndims < 2)</span></div><div class="line"><a name="l01173"></a><span class="lineno"> 1173</span> <span class="comment"> print "error: rank of dataset < 2"</span></div><div class="line"><a name="l01174"></a><span class="lineno"> 1174</span> <span class="comment"> return ""</span></div><div class="line"><a name="l01175"></a><span class="lineno"> 1175</span> <span class="comment"> elseif (di.ndims < 3)</span></div><div class="line"><a name="l01176"></a><span class="lineno"> 1176</span> <span class="comment"> progress = 0</span></div><div class="line"><a name="l01177"></a><span class="lineno"> 1177</span> <span class="comment"> endif</span></div><div class="line"><a name="l01178"></a><span class="lineno"> 1178</span> <span class="comment"> </span></div><div class="line"><a name="l01179"></a><span class="lineno"> 1179</span> <span class="comment"> variable idx, idy, idz, idt, izt</span></div><div class="line"><a name="l01180"></a><span class="lineno"> 1180</span> <span class="comment"> variable transpose = WhichListItem(datawavename, kTransposedDatasets) >= 0</span></div><div class="line"><a name="l01181"></a><span class="lineno"> 1181</span> <span class="comment"> if (transpose)</span></div><div class="line"><a name="l01182"></a><span class="lineno"> 1182</span> <span class="comment"> idx = 1</span></div><div class="line"><a name="l01183"></a><span class="lineno"> 1183</span> <span class="comment"> idy = 0</span></div><div class="line"><a name="l01184"></a><span class="lineno"> 1184</span> <span class="comment"> else</span></div><div class="line"><a name="l01185"></a><span class="lineno"> 1185</span> <span class="comment"> idx = 0</span></div><div class="line"><a name="l01186"></a><span class="lineno"> 1186</span> <span class="comment"> idy = 1</span></div><div class="line"><a name="l01187"></a><span class="lineno"> 1187</span> <span class="comment"> endif</span></div><div class="line"><a name="l01188"></a><span class="lineno"> 1188</span> <span class="comment"> idz = 2</span></div><div class="line"><a name="l01189"></a><span class="lineno"> 1189</span> <span class="comment"> idt = 3</span></div><div class="line"><a name="l01190"></a><span class="lineno"> 1190</span> <span class="comment"> </span></div><div class="line"><a name="l01191"></a><span class="lineno"> 1191</span> <span class="comment"> variable nx, ny, nz, nt, nzt</span></div><div class="line"><a name="l01192"></a><span class="lineno"> 1192</span> <span class="comment"> nx = di.dims[idx]</span></div><div class="line"><a name="l01193"></a><span class="lineno"> 1193</span> <span class="comment"> ny = di.dims[idy]</span></div><div class="line"><a name="l01194"></a><span class="lineno"> 1194</span> <span class="comment"> nz = di.dims[idz]</span></div><div class="line"><a name="l01195"></a><span class="lineno"> 1195</span> <span class="comment"> nt = di.dims[idt]</span></div><div class="line"><a name="l01196"></a><span class="lineno"> 1196</span> <span class="comment"> make /n=(nx,ny,nz,nt) /o $datawavename</span></div><div class="line"><a name="l01197"></a><span class="lineno"> 1197</span> <span class="comment"> wave data = $datawavename</span></div><div class="line"><a name="l01198"></a><span class="lineno"> 1198</span> <span class="comment"></span></div><div class="line"><a name="l01199"></a><span class="lineno"> 1199</span> <span class="comment"> nz = max(nz, 1)</span></div><div class="line"><a name="l01200"></a><span class="lineno"> 1200</span> <span class="comment"> nt = max(nt, 1)</span></div><div class="line"><a name="l01201"></a><span class="lineno"> 1201</span> <span class="comment"> nzt = nz * nt</span></div><div class="line"><a name="l01202"></a><span class="lineno"> 1202</span> <span class="comment"> izt = 0</span></div><div class="line"><a name="l01203"></a><span class="lineno"> 1203</span> <span class="comment"> if (progress)</span></div><div class="line"><a name="l01204"></a><span class="lineno"> 1204</span> <span class="comment"> display_progress_panel("HDF5 Import", "Loading data...", nzt)</span></div><div class="line"><a name="l01205"></a><span class="lineno"> 1205</span> <span class="comment"> endif</span></div><div class="line"><a name="l01206"></a><span class="lineno"> 1206</span> <span class="comment"> </span></div><div class="line"><a name="l01207"></a><span class="lineno"> 1207</span> <span class="comment"> // load data image by image</span></div><div class="line"><a name="l01208"></a><span class="lineno"> 1208</span> <span class="comment"> HDF5MakeHyperslabWave("slab", max(di.ndims, 4))</span></div><div class="line"><a name="l01209"></a><span class="lineno"> 1209</span> <span class="comment"> wave slab</span></div><div class="line"><a name="l01210"></a><span class="lineno"> 1210</span> <span class="comment"> slab[][%Start] = 0</span></div><div class="line"><a name="l01211"></a><span class="lineno"> 1211</span> <span class="comment"> slab[][%Stride] = 1</span></div><div class="line"><a name="l01212"></a><span class="lineno"> 1212</span> <span class="comment"> slab[][%Count] = 1</span></div><div class="line"><a name="l01213"></a><span class="lineno"> 1213</span> <span class="comment"> slab[][%Block] = 1</span></div><div class="line"><a name="l01214"></a><span class="lineno"> 1214</span> <span class="comment"> slab[idx][%Block] = nx</span></div><div class="line"><a name="l01215"></a><span class="lineno"> 1215</span> <span class="comment"> slab[idy][%Block] = ny</span></div><div class="line"><a name="l01216"></a><span class="lineno"> 1216</span> <span class="comment"> </span></div><div class="line"><a name="l01217"></a><span class="lineno"> 1217</span> <span class="comment"> variable iz, it</span></div><div class="line"><a name="l01218"></a><span class="lineno"> 1218</span> <span class="comment"> for (iz = 0; iz < nz; iz += 1)</span></div><div class="line"><a name="l01219"></a><span class="lineno"> 1219</span> <span class="comment"> for (it = 0; it < nt; it += 1)</span></div><div class="line"><a name="l01220"></a><span class="lineno"> 1220</span> <span class="comment"> slab[idz][%Start] = iz</span></div><div class="line"><a name="l01221"></a><span class="lineno"> 1221</span> <span class="comment"> slab[idt][%Start] = it</span></div><div class="line"><a name="l01222"></a><span class="lineno"> 1222</span> <span class="comment"> HDF5LoadData /O /Q /Z /SLAB=slab /N=slabdata fileID, datasetpath</span></div><div class="line"><a name="l01223"></a><span class="lineno"> 1223</span> <span class="comment"> wave slabdata // 2D, 3D, or 4D with singletons</span></div><div class="line"><a name="l01224"></a><span class="lineno"> 1224</span> <span class="comment"> if (transpose)</span></div><div class="line"><a name="l01225"></a><span class="lineno"> 1225</span> <span class="comment"> data[][][iz][it] = slabdata[q][p][0][0]</span></div><div class="line"><a name="l01226"></a><span class="lineno"> 1226</span> <span class="comment"> else</span></div><div class="line"><a name="l01227"></a><span class="lineno"> 1227</span> <span class="comment"> data[][][iz][it] = slabdata[p][q][0][0]</span></div><div class="line"><a name="l01228"></a><span class="lineno"> 1228</span> <span class="comment"> endif</span></div><div class="line"><a name="l01229"></a><span class="lineno"> 1229</span> <span class="comment"> </span></div><div class="line"><a name="l01230"></a><span class="lineno"> 1230</span> <span class="comment"> // progress window</span></div><div class="line"><a name="l01231"></a><span class="lineno"> 1231</span> <span class="comment"> izt += 1</span></div><div class="line"><a name="l01232"></a><span class="lineno"> 1232</span> <span class="comment"> if (progress)</span></div><div class="line"><a name="l01233"></a><span class="lineno"> 1233</span> <span class="comment"> if (update_progress_panel(izt))</span></div><div class="line"><a name="l01234"></a><span class="lineno"> 1234</span> <span class="comment"> result = -4 // user abort</span></div><div class="line"><a name="l01235"></a><span class="lineno"> 1235</span> <span class="comment"> break</span></div><div class="line"><a name="l01236"></a><span class="lineno"> 1236</span> <span class="comment"> endif</span></div><div class="line"><a name="l01237"></a><span class="lineno"> 1237</span> <span class="comment"> endif</span></div><div class="line"><a name="l01238"></a><span class="lineno"> 1238</span> <span class="comment"> endfor</span></div><div class="line"><a name="l01239"></a><span class="lineno"> 1239</span> <span class="comment"> if (result < 0)</span></div><div class="line"><a name="l01240"></a><span class="lineno"> 1240</span> <span class="comment"> break</span></div><div class="line"><a name="l01241"></a><span class="lineno"> 1241</span> <span class="comment"> endif</span></div><div class="line"><a name="l01242"></a><span class="lineno"> 1242</span> <span class="comment"> endfor</span></div><div class="line"><a name="l01243"></a><span class="lineno"> 1243</span> <span class="comment"> </span></div><div class="line"><a name="l01244"></a><span class="lineno"> 1244</span> <span class="comment"> if (progress)</span></div><div class="line"><a name="l01245"></a><span class="lineno"> 1245</span> <span class="comment"> kill_progress_panel()</span></div><div class="line"><a name="l01246"></a><span class="lineno"> 1246</span> <span class="comment"> endif</span></div><div class="line"><a name="l01247"></a><span class="lineno"> 1247</span> <span class="comment"> </span></div><div class="line"><a name="l01248"></a><span class="lineno"> 1248</span> <span class="comment"> killwaves /z slab, slabdata</span></div><div class="line"><a name="l01249"></a><span class="lineno"> 1249</span> <span class="comment"> if (!result)</span></div><div class="line"><a name="l01250"></a><span class="lineno"> 1250</span> <span class="comment"> ps_set_dimlabels(data)</span></div><div class="line"><a name="l01251"></a><span class="lineno"> 1251</span> <span class="comment"> return datawavename</span></div><div class="line"><a name="l01252"></a><span class="lineno"> 1252</span> <span class="comment"> else</span></div><div class="line"><a name="l01253"></a><span class="lineno"> 1253</span> <span class="comment"> killwaves /z data</span></div><div class="line"><a name="l01254"></a><span class="lineno"> 1254</span> <span class="comment"> return ""</span></div><div class="line"><a name="l01255"></a><span class="lineno"> 1255</span> <span class="comment"> endif</span></div><div class="line"><a name="l01256"></a><span class="lineno"> 1256</span> <span class="comment">end</span></div><div class="line"><a name="l01257"></a><span class="lineno"> 1257</span> <span class="comment"></span></div><div class="line"><a name="l01284"></a><span class="lineno"><a class="line" href="pearl-pshell-import_8ipf.html#a035a4df9f4508144149abdb0b46c87d1"> 1284</a></span> <span class="comment">function /s psh5_load_dataset_slab(fileID, datapath, datasetname, dim2start, dim2count, dim3start, dim3count)</span></div><div class="line"><a name="l01285"></a><span class="lineno"> 1285</span> <span class="comment"> variable fileID</span></div><div class="line"><a name="l01286"></a><span class="lineno"> 1286</span> <span class="comment"> string datapath</span></div><div class="line"><a name="l01287"></a><span class="lineno"> 1287</span> <span class="comment"> string datasetname</span></div><div class="line"><a name="l01288"></a><span class="lineno"> 1288</span> <span class="comment"> variable dim2start</span></div><div class="line"><a name="l01289"></a><span class="lineno"> 1289</span> <span class="comment"> variable dim2count</span></div><div class="line"><a name="l01290"></a><span class="lineno"> 1290</span> <span class="comment"> variable dim3start</span></div><div class="line"><a name="l01291"></a><span class="lineno"> 1291</span> <span class="comment"> variable dim3count</span></div><div class="line"><a name="l01292"></a><span class="lineno"> 1292</span> <span class="comment"> </span></div><div class="line"><a name="l01293"></a><span class="lineno"> 1293</span> <span class="comment"> string datasetpath</span></div><div class="line"><a name="l01294"></a><span class="lineno"> 1294</span> <span class="comment"> string datawavename</span></div><div class="line"><a name="l01295"></a><span class="lineno"> 1295</span> <span class="comment"> datasetpath = datapath + "/" + datasetname</span></div><div class="line"><a name="l01296"></a><span class="lineno"> 1296</span> <span class="comment"> datasetpath = ReplaceString("//", datasetpath, "/")</span></div><div class="line"><a name="l01297"></a><span class="lineno"> 1297</span> <span class="comment"> datawavename = StringFromList(ItemsInList(datasetpath, "/") - 1, datasetpath, "/")</span></div><div class="line"><a name="l01298"></a><span class="lineno"> 1298</span> <span class="comment"> </span></div><div class="line"><a name="l01299"></a><span class="lineno"> 1299</span> <span class="comment"> STRUCT HDF5DataInfo di</span></div><div class="line"><a name="l01300"></a><span class="lineno"> 1300</span> <span class="comment"> InitHDF5DataInfo(di)</span></div><div class="line"><a name="l01301"></a><span class="lineno"> 1301</span> <span class="comment"> variable err = HDF5DatasetInfo(fileID, datasetpath, 0, di)</span></div><div class="line"><a name="l01302"></a><span class="lineno"> 1302</span> <span class="comment"> if (err != 0)</span></div><div class="line"><a name="l01303"></a><span class="lineno"> 1303</span> <span class="comment"> print "error accessing detector/data"</span></div><div class="line"><a name="l01304"></a><span class="lineno"> 1304</span> <span class="comment"> return ""</span></div><div class="line"><a name="l01305"></a><span class="lineno"> 1305</span> <span class="comment"> endif</span></div><div class="line"><a name="l01306"></a><span class="lineno"> 1306</span> <span class="comment"> if (di.ndims < 2)</span></div><div class="line"><a name="l01307"></a><span class="lineno"> 1307</span> <span class="comment"> print "error: rank of dataset < 2"</span></div><div class="line"><a name="l01308"></a><span class="lineno"> 1308</span> <span class="comment"> return ""</span></div><div class="line"><a name="l01309"></a><span class="lineno"> 1309</span> <span class="comment"> endif</span></div><div class="line"><a name="l01310"></a><span class="lineno"> 1310</span> <span class="comment"> </span></div><div class="line"><a name="l01311"></a><span class="lineno"> 1311</span> <span class="comment"> variable idx, idy, idz, idt</span></div><div class="line"><a name="l01312"></a><span class="lineno"> 1312</span> <span class="comment"> variable transpose = WhichListItem(datawavename, kTransposedDatasets) >= 0</span></div><div class="line"><a name="l01313"></a><span class="lineno"> 1313</span> <span class="comment"> if (transpose)</span></div><div class="line"><a name="l01314"></a><span class="lineno"> 1314</span> <span class="comment"> idx = 1</span></div><div class="line"><a name="l01315"></a><span class="lineno"> 1315</span> <span class="comment"> idy = 0</span></div><div class="line"><a name="l01316"></a><span class="lineno"> 1316</span> <span class="comment"> else</span></div><div class="line"><a name="l01317"></a><span class="lineno"> 1317</span> <span class="comment"> idx = 0</span></div><div class="line"><a name="l01318"></a><span class="lineno"> 1318</span> <span class="comment"> idy = 1</span></div><div class="line"><a name="l01319"></a><span class="lineno"> 1319</span> <span class="comment"> endif</span></div><div class="line"><a name="l01320"></a><span class="lineno"> 1320</span> <span class="comment"> idz = 2</span></div><div class="line"><a name="l01321"></a><span class="lineno"> 1321</span> <span class="comment"> idt = 3</span></div><div class="line"><a name="l01322"></a><span class="lineno"> 1322</span> <span class="comment"></span></div><div class="line"><a name="l01323"></a><span class="lineno"> 1323</span> <span class="comment"> variable nx, ny</span></div><div class="line"><a name="l01324"></a><span class="lineno"> 1324</span> <span class="comment"> nx = di.dims[idx]</span></div><div class="line"><a name="l01325"></a><span class="lineno"> 1325</span> <span class="comment"> ny = di.dims[idy]</span></div><div class="line"><a name="l01326"></a><span class="lineno"> 1326</span> <span class="comment"> make /n=(nx,ny) /o $datawavename</span></div><div class="line"><a name="l01327"></a><span class="lineno"> 1327</span> <span class="comment"> wave data = $datawavename</span></div><div class="line"><a name="l01328"></a><span class="lineno"> 1328</span> <span class="comment"> data = 0</span></div><div class="line"><a name="l01329"></a><span class="lineno"> 1329</span> <span class="comment"></span></div><div class="line"><a name="l01330"></a><span class="lineno"> 1330</span> <span class="comment"> HDF5MakeHyperslabWave("slab", max(di.ndims, 4))</span></div><div class="line"><a name="l01331"></a><span class="lineno"> 1331</span> <span class="comment"> wave slab</span></div><div class="line"><a name="l01332"></a><span class="lineno"> 1332</span> <span class="comment"> slab[][%Start] = 0</span></div><div class="line"><a name="l01333"></a><span class="lineno"> 1333</span> <span class="comment"> slab[][%Stride] = 1</span></div><div class="line"><a name="l01334"></a><span class="lineno"> 1334</span> <span class="comment"> slab[][%Count] = 1</span></div><div class="line"><a name="l01335"></a><span class="lineno"> 1335</span> <span class="comment"> slab[][%Block] = 1</span></div><div class="line"><a name="l01336"></a><span class="lineno"> 1336</span> <span class="comment"> slab[idx][%Block] = nx</span></div><div class="line"><a name="l01337"></a><span class="lineno"> 1337</span> <span class="comment"> slab[idy][%Block] = ny</span></div><div class="line"><a name="l01338"></a><span class="lineno"> 1338</span> <span class="comment"> </span></div><div class="line"><a name="l01339"></a><span class="lineno"> 1339</span> <span class="comment"> variable iz, it</span></div><div class="line"><a name="l01340"></a><span class="lineno"> 1340</span> <span class="comment"> variable navg = 0</span></div><div class="line"><a name="l01341"></a><span class="lineno"> 1341</span> <span class="comment"> variable dim2end = dim2start + dim2count - 1</span></div><div class="line"><a name="l01342"></a><span class="lineno"> 1342</span> <span class="comment"> variable dim3end = dim3start + dim3count - 1</span></div><div class="line"><a name="l01343"></a><span class="lineno"> 1343</span> <span class="comment"> for (iz = dim2start; iz <= dim2end; iz += 1)</span></div><div class="line"><a name="l01344"></a><span class="lineno"> 1344</span> <span class="comment"> for (it = dim3start; it <= dim3end; it += 1)</span></div><div class="line"><a name="l01345"></a><span class="lineno"> 1345</span> <span class="comment"> slab[idz][%Start] = iz</span></div><div class="line"><a name="l01346"></a><span class="lineno"> 1346</span> <span class="comment"> slab[idt][%Start] = it</span></div><div class="line"><a name="l01347"></a><span class="lineno"> 1347</span> <span class="comment"> HDF5LoadData /O /Q /Z /SLAB=slab /N=slabdata fileID, datasetpath</span></div><div class="line"><a name="l01348"></a><span class="lineno"> 1348</span> <span class="comment"> if (!v_flag)</span></div><div class="line"><a name="l01349"></a><span class="lineno"> 1349</span> <span class="comment"> wave slabdata</span></div><div class="line"><a name="l01350"></a><span class="lineno"> 1350</span> <span class="comment"> if (transpose)</span></div><div class="line"><a name="l01351"></a><span class="lineno"> 1351</span> <span class="comment"> data += slabdata[q][p][0][0]</span></div><div class="line"><a name="l01352"></a><span class="lineno"> 1352</span> <span class="comment"> else</span></div><div class="line"><a name="l01353"></a><span class="lineno"> 1353</span> <span class="comment"> data += slabdata[p][q][0][0]</span></div><div class="line"><a name="l01354"></a><span class="lineno"> 1354</span> <span class="comment"> endif</span></div><div class="line"><a name="l01355"></a><span class="lineno"> 1355</span> <span class="comment"> navg += 1</span></div><div class="line"><a name="l01356"></a><span class="lineno"> 1356</span> <span class="comment"> endif</span></div><div class="line"><a name="l01357"></a><span class="lineno"> 1357</span> <span class="comment"> endfor</span></div><div class="line"><a name="l01358"></a><span class="lineno"> 1358</span> <span class="comment"> endfor</span></div><div class="line"><a name="l01359"></a><span class="lineno"> 1359</span> <span class="comment"> if (navg)</span></div><div class="line"><a name="l01360"></a><span class="lineno"> 1360</span> <span class="comment"> data /= navg</span></div><div class="line"><a name="l01361"></a><span class="lineno"> 1361</span> <span class="comment"> endif</span></div><div class="line"><a name="l01362"></a><span class="lineno"> 1362</span> <span class="comment"> </span></div><div class="line"><a name="l01363"></a><span class="lineno"> 1363</span> <span class="comment"> killwaves /z slab, slabdata</span></div><div class="line"><a name="l01364"></a><span class="lineno"> 1364</span> <span class="comment"> ps_set_dimlabels(data)</span></div><div class="line"><a name="l01365"></a><span class="lineno"> 1365</span> <span class="comment"> return datawavename</span></div><div class="line"><a name="l01366"></a><span class="lineno"> 1366</span> <span class="comment">end</span></div><div class="line"><a name="l01367"></a><span class="lineno"> 1367</span> <span class="comment"></span></div><div class="line"><a name="l01383"></a><span class="lineno"><a class="line" href="pearl-pshell-import_8ipf.html#aba25eb98e4c6cc9066c46ef6be1cde15"> 1383</a></span> <span class="comment">function ps_set_dimlabels(data)</span></div><div class="line"><a name="l01384"></a><span class="lineno"> 1384</span> <span class="comment"> wave data</span></div><div class="line"><a name="l01385"></a><span class="lineno"> 1385</span> <span class="comment"> </span></div><div class="line"><a name="l01386"></a><span class="lineno"> 1386</span> <span class="comment"> ps_set_dimlabels2(data, NameOfWave(data))</span></div><div class="line"><a name="l01387"></a><span class="lineno"> 1387</span> <span class="comment">end</span></div><div class="line"><a name="l01388"></a><span class="lineno"> 1388</span> <span class="comment"></span></div><div class="line"><a name="l01402"></a><span class="lineno"><a class="line" href="pearl-pshell-import_8ipf.html#a8704627410409bcd27a1adeda4082c47"> 1402</a></span> <span class="comment">function ps_set_dimlabels2(data, name)</span></div><div class="line"><a name="l01403"></a><span class="lineno"> 1403</span> <span class="comment"> wave data</span></div><div class="line"><a name="l01404"></a><span class="lineno"> 1404</span> <span class="comment"> string name</span></div><div class="line"><a name="l01405"></a><span class="lineno"> 1405</span> <span class="comment"> </span></div><div class="line"><a name="l01406"></a><span class="lineno"> 1406</span> <span class="comment"> variable dummy</span></div><div class="line"><a name="l01407"></a><span class="lineno"> 1407</span> <span class="comment"> try </span></div><div class="line"><a name="l01408"></a><span class="lineno"> 1408</span> <span class="comment"> // intrinsic dimensions</span></div><div class="line"><a name="l01409"></a><span class="lineno"> 1409</span> <span class="comment"> strswitch(name)</span></div><div class="line"><a name="l01410"></a><span class="lineno"> 1410</span> <span class="comment"> case "ScientaImage":</span></div><div class="line"><a name="l01411"></a><span class="lineno"> 1411</span> <span class="comment"> setdimlabel 0, -1, $kEnergyDimLabel, data</span></div><div class="line"><a name="l01412"></a><span class="lineno"> 1412</span> <span class="comment"> setdimlabel 1, -1, $kAngleDimLabel, data</span></div><div class="line"><a name="l01413"></a><span class="lineno"> 1413</span> <span class="comment"> if (WaveDims(data) >= 3)</span></div><div class="line"><a name="l01414"></a><span class="lineno"> 1414</span> <span class="comment"> setdimlabel 2, -1, $kScanDimLabel, data</span></div><div class="line"><a name="l01415"></a><span class="lineno"> 1415</span> <span class="comment"> endif</span></div><div class="line"><a name="l01416"></a><span class="lineno"> 1416</span> <span class="comment"> AbortOnRTE</span></div><div class="line"><a name="l01417"></a><span class="lineno"> 1417</span> <span class="comment"> break</span></div><div class="line"><a name="l01418"></a><span class="lineno"> 1418</span> <span class="comment"> case "ImageAngleDistribution":</span></div><div class="line"><a name="l01419"></a><span class="lineno"> 1419</span> <span class="comment"> case "ScientaAngleDistribution":</span></div><div class="line"><a name="l01420"></a><span class="lineno"> 1420</span> <span class="comment"> if (WaveDims(data) >= 2)</span></div><div class="line"><a name="l01421"></a><span class="lineno"> 1421</span> <span class="comment"> setdimlabel 0, -1, $kScanDimLabel, data</span></div><div class="line"><a name="l01422"></a><span class="lineno"> 1422</span> <span class="comment"> setdimlabel 1, -1, $kAngleDimLabel, data</span></div><div class="line"><a name="l01423"></a><span class="lineno"> 1423</span> <span class="comment"> else</span></div><div class="line"><a name="l01424"></a><span class="lineno"> 1424</span> <span class="comment"> setdimlabel 0, -1, $kAngleDimLabel, data</span></div><div class="line"><a name="l01425"></a><span class="lineno"> 1425</span> <span class="comment"> endif</span></div><div class="line"><a name="l01426"></a><span class="lineno"> 1426</span> <span class="comment"> AbortOnRTE</span></div><div class="line"><a name="l01427"></a><span class="lineno"> 1427</span> <span class="comment"> break</span></div><div class="line"><a name="l01428"></a><span class="lineno"> 1428</span> <span class="comment"> case "ScientaSpectrum":</span></div><div class="line"><a name="l01429"></a><span class="lineno"> 1429</span> <span class="comment"> case "ImageEnergyDistribution":</span></div><div class="line"><a name="l01430"></a><span class="lineno"> 1430</span> <span class="comment"> case "ScientaEnergyDistribution":</span></div><div class="line"><a name="l01431"></a><span class="lineno"> 1431</span> <span class="comment"> if (WaveDims(data) >= 2)</span></div><div class="line"><a name="l01432"></a><span class="lineno"> 1432</span> <span class="comment"> setdimlabel 0, -1, $kScanDimLabel, data</span></div><div class="line"><a name="l01433"></a><span class="lineno"> 1433</span> <span class="comment"> setdimlabel 1, -1, $kEnergyDimLabel, data</span></div><div class="line"><a name="l01434"></a><span class="lineno"> 1434</span> <span class="comment"> else</span></div><div class="line"><a name="l01435"></a><span class="lineno"> 1435</span> <span class="comment"> setdimlabel 0, -1, $kEnergyDimLabel, data</span></div><div class="line"><a name="l01436"></a><span class="lineno"> 1436</span> <span class="comment"> endif</span></div><div class="line"><a name="l01437"></a><span class="lineno"> 1437</span> <span class="comment"> AbortOnRTE</span></div><div class="line"><a name="l01438"></a><span class="lineno"> 1438</span> <span class="comment"> break</span></div><div class="line"><a name="l01439"></a><span class="lineno"> 1439</span> <span class="comment"> default:</span></div><div class="line"><a name="l01440"></a><span class="lineno"> 1440</span> <span class="comment"> if (WaveDims(data) == 1)</span></div><div class="line"><a name="l01441"></a><span class="lineno"> 1441</span> <span class="comment"> setdimlabel 0, -1, $kScanDimLabel, data</span></div><div class="line"><a name="l01442"></a><span class="lineno"> 1442</span> <span class="comment"> AbortOnRTE</span></div><div class="line"><a name="l01443"></a><span class="lineno"> 1443</span> <span class="comment"> else</span></div><div class="line"><a name="l01444"></a><span class="lineno"> 1444</span> <span class="comment"> return 1</span></div><div class="line"><a name="l01445"></a><span class="lineno"> 1445</span> <span class="comment"> endif</span></div><div class="line"><a name="l01446"></a><span class="lineno"> 1446</span> <span class="comment"> endswitch</span></div><div class="line"><a name="l01447"></a><span class="lineno"> 1447</span> <span class="comment"> catch</span></div><div class="line"><a name="l01448"></a><span class="lineno"> 1448</span> <span class="comment"> dummy = GetRTError(1)</span></div><div class="line"><a name="l01449"></a><span class="lineno"> 1449</span> <span class="comment"> return 2</span></div><div class="line"><a name="l01450"></a><span class="lineno"> 1450</span> <span class="comment"> endtry</span></div><div class="line"><a name="l01451"></a><span class="lineno"> 1451</span> <span class="comment"> return 0</span></div><div class="line"><a name="l01452"></a><span class="lineno"> 1452</span> <span class="comment">end</span></div><div class="line"><a name="l01453"></a><span class="lineno"> 1453</span> <span class="comment"></span></div><div class="line"><a name="l01459"></a><span class="lineno"><a class="line" href="pearl-pshell-import_8ipf.html#a79b968d7439dfbfbc38c05f933071489"> 1459</a></span> <span class="comment">static function /df find_scan_folder(dataDF)</span></div><div class="line"><a name="l01460"></a><span class="lineno"> 1460</span> <span class="comment"> dfref dataDF</span></div><div class="line"><a name="l01461"></a><span class="lineno"> 1461</span> <span class="comment"> </span></div><div class="line"><a name="l01462"></a><span class="lineno"> 1462</span> <span class="comment"> dfref attrDF = dataDF:attr</span></div><div class="line"><a name="l01463"></a><span class="lineno"> 1463</span> <span class="comment"> if (!DataFolderRefStatus(attrDF))</span></div><div class="line"><a name="l01464"></a><span class="lineno"> 1464</span> <span class="comment"> string df = GetDataFolder(1, dataDF) + ":"</span></div><div class="line"><a name="l01465"></a><span class="lineno"> 1465</span> <span class="comment"> dfref scanDF = $df</span></div><div class="line"><a name="l01466"></a><span class="lineno"> 1466</span> <span class="comment"> else</span></div><div class="line"><a name="l01467"></a><span class="lineno"> 1467</span> <span class="comment"> dfref scanDF = dataDF</span></div><div class="line"><a name="l01468"></a><span class="lineno"> 1468</span> <span class="comment"> endif</span></div><div class="line"><a name="l01469"></a><span class="lineno"> 1469</span> <span class="comment"> return scanDF</span></div><div class="line"><a name="l01470"></a><span class="lineno"> 1470</span> <span class="comment">end</span></div><div class="line"><a name="l01471"></a><span class="lineno"> 1471</span> <span class="comment"></span></div><div class="line"><a name="l01476"></a><span class="lineno"><a class="line" href="pearl-pshell-import_8ipf.html#a41bf534983b0662ec2609b136c395f14"> 1476</a></span> <span class="comment">static function /df find_attr_folder(dataDF)</span></div><div class="line"><a name="l01477"></a><span class="lineno"> 1477</span> <span class="comment"> dfref dataDF</span></div><div class="line"><a name="l01478"></a><span class="lineno"> 1478</span> <span class="comment"> </span></div><div class="line"><a name="l01479"></a><span class="lineno"> 1479</span> <span class="comment"> dfref attrDF = dataDF:attr</span></div><div class="line"><a name="l01480"></a><span class="lineno"> 1480</span> <span class="comment"> if (!DataFolderRefStatus(attrDF))</span></div><div class="line"><a name="l01481"></a><span class="lineno"> 1481</span> <span class="comment"> string df = GetDataFolder(1, dataDF) + ":"</span></div><div class="line"><a name="l01482"></a><span class="lineno"> 1482</span> <span class="comment"> dfref scanDF = $df</span></div><div class="line"><a name="l01483"></a><span class="lineno"> 1483</span> <span class="comment"> dfref attrDF = scanDF:attr</span></div><div class="line"><a name="l01484"></a><span class="lineno"> 1484</span> <span class="comment"> endif</span></div><div class="line"><a name="l01485"></a><span class="lineno"> 1485</span> <span class="comment"> return attrDF</span></div><div class="line"><a name="l01486"></a><span class="lineno"> 1486</span> <span class="comment">end</span></div><div class="line"><a name="l01487"></a><span class="lineno"> 1487</span> <span class="comment"></span></div><div class="line"><a name="l01504"></a><span class="lineno"><a class="line" href="pearl-pshell-import_8ipf.html#af08a467036c64f70ca3dfe644fcc457c"> 1504</a></span> <span class="comment">function ps_scale_datasets()</span></div><div class="line"><a name="l01505"></a><span class="lineno"> 1505</span> <span class="comment"> dfref scanDF = GetDataFolderDFR()</span></div><div class="line"><a name="l01506"></a><span class="lineno"> 1506</span> <span class="comment"> dfref attrDF = find_attr_folder(scanDF)</span></div><div class="line"><a name="l01507"></a><span class="lineno"> 1507</span> <span class="comment"> </span></div><div class="line"><a name="l01508"></a><span class="lineno"> 1508</span> <span class="comment"> make /n=3 /free lo, hi</span></div><div class="line"><a name="l01509"></a><span class="lineno"> 1509</span> <span class="comment"> make /n=3 /t /free ax, un</span></div><div class="line"><a name="l01510"></a><span class="lineno"> 1510</span> <span class="comment"> wave /t /z /SDFR=scanDF ScanReadables</span></div><div class="line"><a name="l01511"></a><span class="lineno"> 1511</span> <span class="comment"> if (WaveExists(ScanReadables))</span></div><div class="line"><a name="l01512"></a><span class="lineno"> 1512</span> <span class="comment"> variable isr</span></div><div class="line"><a name="l01513"></a><span class="lineno"> 1513</span> <span class="comment"> variable nsr = numpnts(ScanReadables)</span></div><div class="line"><a name="l01514"></a><span class="lineno"> 1514</span> <span class="comment"> string ssr</span></div><div class="line"><a name="l01515"></a><span class="lineno"> 1515</span> <span class="comment"> string sdf</span></div><div class="line"><a name="l01516"></a><span class="lineno"> 1516</span> <span class="comment"> for (isr = 0; isr < nsr; isr += 1)</span></div><div class="line"><a name="l01517"></a><span class="lineno"> 1517</span> <span class="comment"> setdatafolder scanDF</span></div><div class="line"><a name="l01518"></a><span class="lineno"> 1518</span> <span class="comment"> ssr = ScanReadables[isr]</span></div><div class="line"><a name="l01519"></a><span class="lineno"> 1519</span> <span class="comment"> if (ItemsInList(ssr, "/") >= 2)</span></div><div class="line"><a name="l01520"></a><span class="lineno"> 1520</span> <span class="comment"> sdf = StringFromList(0, ssr, "/")</span></div><div class="line"><a name="l01521"></a><span class="lineno"> 1521</span> <span class="comment"> ssr = RemoveListItem(0, ssr, "/")</span></div><div class="line"><a name="l01522"></a><span class="lineno"> 1522</span> <span class="comment"> setdatafolder $sdf</span></div><div class="line"><a name="l01523"></a><span class="lineno"> 1523</span> <span class="comment"> endif</span></div><div class="line"><a name="l01524"></a><span class="lineno"> 1524</span> <span class="comment"> wave /z wsr=$ssr</span></div><div class="line"><a name="l01525"></a><span class="lineno"> 1525</span> <span class="comment"> if (WaveExists(wsr))</span></div><div class="line"><a name="l01526"></a><span class="lineno"> 1526</span> <span class="comment"> ps_detect_scale(ax, lo, hi, un)</span></div><div class="line"><a name="l01527"></a><span class="lineno"> 1527</span> <span class="comment"> ps_scale_dataset_2(wsr, ax, lo, hi, un)</span></div><div class="line"><a name="l01528"></a><span class="lineno"> 1528</span> <span class="comment"> endif</span></div><div class="line"><a name="l01529"></a><span class="lineno"> 1529</span> <span class="comment"> endfor</span></div><div class="line"><a name="l01530"></a><span class="lineno"> 1530</span> <span class="comment"> endif</span></div><div class="line"><a name="l01531"></a><span class="lineno"> 1531</span> <span class="comment"> setdatafolder scanDF</span></div><div class="line"><a name="l01532"></a><span class="lineno"> 1532</span> <span class="comment">end</span></div><div class="line"><a name="l01533"></a><span class="lineno"> 1533</span> <span class="comment"></span></div><div class="line"><a name="l01550"></a><span class="lineno"><a class="line" href="pearl-pshell-import_8ipf.html#adc11ea797562b3d99c247f4866618d39"> 1550</a></span> <span class="comment">function ps_scale_dataset(data)</span></div><div class="line"><a name="l01551"></a><span class="lineno"> 1551</span> <span class="comment"> wave data</span></div><div class="line"><a name="l01552"></a><span class="lineno"> 1552</span> <span class="comment"></span></div><div class="line"><a name="l01553"></a><span class="lineno"> 1553</span> <span class="comment"> dfref saveDF = GetDataFolderDFR()</span></div><div class="line"><a name="l01554"></a><span class="lineno"> 1554</span> <span class="comment"> dfref dataDF = GetWavesDataFolderDFR(data)</span></div><div class="line"><a name="l01555"></a><span class="lineno"> 1555</span> <span class="comment"> </span></div><div class="line"><a name="l01556"></a><span class="lineno"> 1556</span> <span class="comment"> setdatafolder dataDF</span></div><div class="line"><a name="l01557"></a><span class="lineno"> 1557</span> <span class="comment"> make /n=3 /free lo, hi</span></div><div class="line"><a name="l01558"></a><span class="lineno"> 1558</span> <span class="comment"> make /n=3 /t /free ax, un</span></div><div class="line"><a name="l01559"></a><span class="lineno"> 1559</span> <span class="comment"> ps_detect_scale(ax, lo, hi, un)</span></div><div class="line"><a name="l01560"></a><span class="lineno"> 1560</span> <span class="comment"> ps_scale_dataset_2(data, ax, lo, hi, un)</span></div><div class="line"><a name="l01561"></a><span class="lineno"> 1561</span> <span class="comment"> setdatafolder saveDF</span></div><div class="line"><a name="l01562"></a><span class="lineno"> 1562</span> <span class="comment">end</span></div><div class="line"><a name="l01563"></a><span class="lineno"> 1563</span> <span class="comment"></span></div><div class="line"><a name="l01564"></a><span class="lineno"><a class="line" href="pearl-pshell-import_8ipf.html#acfb01ee360b66f286225f6e9c7220ba2"> 1564</a></span> <span class="comment">static function /wave find_scale_wave(name, dataDF, scanDF, attrDF)</span></div><div class="line"><a name="l01565"></a><span class="lineno"> 1565</span> <span class="comment"> string name</span></div><div class="line"><a name="l01566"></a><span class="lineno"> 1566</span> <span class="comment"> dfref dataDF</span></div><div class="line"><a name="l01567"></a><span class="lineno"> 1567</span> <span class="comment"> dfref scanDF</span></div><div class="line"><a name="l01568"></a><span class="lineno"> 1568</span> <span class="comment"> dfref attrDF</span></div><div class="line"><a name="l01569"></a><span class="lineno"> 1569</span> <span class="comment"> </span></div><div class="line"><a name="l01570"></a><span class="lineno"> 1570</span> <span class="comment"> wave /SDFR=dataDF /Z w = $name</span></div><div class="line"><a name="l01571"></a><span class="lineno"> 1571</span> <span class="comment"> if (!WaveExists(w))</span></div><div class="line"><a name="l01572"></a><span class="lineno"> 1572</span> <span class="comment"> wave /SDFR=scanDF /Z w = $name</span></div><div class="line"><a name="l01573"></a><span class="lineno"> 1573</span> <span class="comment"> if (!WaveExists(w))</span></div><div class="line"><a name="l01574"></a><span class="lineno"> 1574</span> <span class="comment"> wave /SDFR=attrDF /Z w = $name</span></div><div class="line"><a name="l01575"></a><span class="lineno"> 1575</span> <span class="comment"> endif</span></div><div class="line"><a name="l01576"></a><span class="lineno"> 1576</span> <span class="comment"> endif</span></div><div class="line"><a name="l01577"></a><span class="lineno"> 1577</span> <span class="comment"> return w</span></div><div class="line"><a name="l01578"></a><span class="lineno"> 1578</span> <span class="comment">end</span></div><div class="line"><a name="l01579"></a><span class="lineno"> 1579</span> <span class="comment"></span></div><div class="line"><a name="l01621"></a><span class="lineno"><a class="line" href="pearl-pshell-import_8ipf.html#acba7f4b98f67cc112c02dfeefe3e5acd"> 1621</a></span> <span class="comment">function ps_detect_scale(ax, lo, hi, un)</span></div><div class="line"><a name="l01622"></a><span class="lineno"> 1622</span> <span class="comment"> wave /t ax</span></div><div class="line"><a name="l01623"></a><span class="lineno"> 1623</span> <span class="comment"> wave lo</span></div><div class="line"><a name="l01624"></a><span class="lineno"> 1624</span> <span class="comment"> wave hi</span></div><div class="line"><a name="l01625"></a><span class="lineno"> 1625</span> <span class="comment"> wave /t un</span></div><div class="line"><a name="l01626"></a><span class="lineno"> 1626</span> <span class="comment"></span></div><div class="line"><a name="l01627"></a><span class="lineno"> 1627</span> <span class="comment"> dfref dataDF = GetDataFolderDFR()</span></div><div class="line"><a name="l01628"></a><span class="lineno"> 1628</span> <span class="comment"> dfref scanDF = find_scan_folder(dataDF)</span></div><div class="line"><a name="l01629"></a><span class="lineno"> 1629</span> <span class="comment"> dfref attrDF = find_attr_folder(dataDF)</span></div><div class="line"><a name="l01630"></a><span class="lineno"> 1630</span> <span class="comment"> </span></div><div class="line"><a name="l01631"></a><span class="lineno"> 1631</span> <span class="comment"> redimension /n=4 lo, hi, un, ax</span></div><div class="line"><a name="l01632"></a><span class="lineno"> 1632</span> <span class="comment"> setdimlabel 0, 0, $kEnergyDimLabel, lo, hi, un, ax</span></div><div class="line"><a name="l01633"></a><span class="lineno"> 1633</span> <span class="comment"> setdimlabel 0, 1, $kAngleDimLabel, lo, hi, un, ax</span></div><div class="line"><a name="l01634"></a><span class="lineno"> 1634</span> <span class="comment"> setdimlabel 0, 2, $kScanDimLabel, lo, hi, un, ax</span></div><div class="line"><a name="l01635"></a><span class="lineno"> 1635</span> <span class="comment"> setdimlabel 0, 3, $kDataDimLabel, lo, hi, un, ax</span></div><div class="line"><a name="l01636"></a><span class="lineno"> 1636</span> <span class="comment"></span></div><div class="line"><a name="l01637"></a><span class="lineno"> 1637</span> <span class="comment"> // default values</span></div><div class="line"><a name="l01638"></a><span class="lineno"> 1638</span> <span class="comment"> lo[%$kEnergyDimLabel] = 0</span></div><div class="line"><a name="l01639"></a><span class="lineno"> 1639</span> <span class="comment"> hi[%$kEnergyDimLabel] = 1</span></div><div class="line"><a name="l01640"></a><span class="lineno"> 1640</span> <span class="comment"> un[%$kEnergyDimLabel] = "eV"</span></div><div class="line"><a name="l01641"></a><span class="lineno"> 1641</span> <span class="comment"> ax[%$kEnergyDimLabel] = "Ekin"</span></div><div class="line"><a name="l01642"></a><span class="lineno"> 1642</span> <span class="comment"></span></div><div class="line"><a name="l01643"></a><span class="lineno"> 1643</span> <span class="comment"> lo[%$kAngleDimLabel] = -1</span></div><div class="line"><a name="l01644"></a><span class="lineno"> 1644</span> <span class="comment"> hi[%$kAngleDimLabel] = 1</span></div><div class="line"><a name="l01645"></a><span class="lineno"> 1645</span> <span class="comment"> un[%$kAngleDimLabel] = "arb."</span></div><div class="line"><a name="l01646"></a><span class="lineno"> 1646</span> <span class="comment"> un[%$kAngleDimLabel] = "slice"</span></div><div class="line"><a name="l01647"></a><span class="lineno"> 1647</span> <span class="comment"></span></div><div class="line"><a name="l01648"></a><span class="lineno"> 1648</span> <span class="comment"> lo[%$kScanDimLabel] = 0</span></div><div class="line"><a name="l01649"></a><span class="lineno"> 1649</span> <span class="comment"> hi[%$kScanDimLabel] = 1</span></div><div class="line"><a name="l01650"></a><span class="lineno"> 1650</span> <span class="comment"> un[%$kScanDimLabel] = "arb."</span></div><div class="line"><a name="l01651"></a><span class="lineno"> 1651</span> <span class="comment"> ax[%$kScanDimLabel] = "scan"</span></div><div class="line"><a name="l01652"></a><span class="lineno"> 1652</span> <span class="comment"> </span></div><div class="line"><a name="l01653"></a><span class="lineno"> 1653</span> <span class="comment"> lo[%$kDataDimLabel] = 0</span></div><div class="line"><a name="l01654"></a><span class="lineno"> 1654</span> <span class="comment"> hi[%$kDataDimLabel] = 0</span></div><div class="line"><a name="l01655"></a><span class="lineno"> 1655</span> <span class="comment"> un[%$kDataDimLabel] = "arb."</span></div><div class="line"><a name="l01656"></a><span class="lineno"> 1656</span> <span class="comment"> ax[%$kDataDimLabel] = "value"</span></div><div class="line"><a name="l01657"></a><span class="lineno"> 1657</span> <span class="comment"> </span></div><div class="line"><a name="l01658"></a><span class="lineno"> 1658</span> <span class="comment"> wave /SDFR=attrDF /T /Z LensMode</span></div><div class="line"><a name="l01659"></a><span class="lineno"> 1659</span> <span class="comment"> wave /Z ChannelBegin = find_scale_wave("ScientaChannelBegin", dataDF, scanDF, attrDF)</span></div><div class="line"><a name="l01660"></a><span class="lineno"> 1660</span> <span class="comment"> wave /Z ChannelEnd = find_scale_wave("ScientaChannelEnd", dataDF, scanDF, attrDF)</span></div><div class="line"><a name="l01661"></a><span class="lineno"> 1661</span> <span class="comment"> wave /Z SliceBegin = find_scale_wave("ScientaSliceBegin", dataDF, scanDF, attrDF)</span></div><div class="line"><a name="l01662"></a><span class="lineno"> 1662</span> <span class="comment"> wave /Z SliceEnd = find_scale_wave("ScientaSliceEnd", dataDF, scanDF, attrDF)</span></div><div class="line"><a name="l01663"></a><span class="lineno"> 1663</span> <span class="comment"></span></div><div class="line"><a name="l01664"></a><span class="lineno"> 1664</span> <span class="comment"> // lens mode can give more detail</span></div><div class="line"><a name="l01665"></a><span class="lineno"> 1665</span> <span class="comment"> if (waveexists(LensMode) && (numpnts(LensMode) >= 1))</span></div><div class="line"><a name="l01666"></a><span class="lineno"> 1666</span> <span class="comment"> strswitch(LensMode[0])</span></div><div class="line"><a name="l01667"></a><span class="lineno"> 1667</span> <span class="comment"> case "Angular45":</span></div><div class="line"><a name="l01668"></a><span class="lineno"> 1668</span> <span class="comment"> lo[%$kAngleDimLabel] = -45/2</span></div><div class="line"><a name="l01669"></a><span class="lineno"> 1669</span> <span class="comment"> hi[%$kAngleDimLabel] = +45/2</span></div><div class="line"><a name="l01670"></a><span class="lineno"> 1670</span> <span class="comment"> un[%$kAngleDimLabel] = "°"</span></div><div class="line"><a name="l01671"></a><span class="lineno"> 1671</span> <span class="comment"> ax[%$kAngleDimLabel] = "angle"</span></div><div class="line"><a name="l01672"></a><span class="lineno"> 1672</span> <span class="comment"> break</span></div><div class="line"><a name="l01673"></a><span class="lineno"> 1673</span> <span class="comment"> case "Angular60":</span></div><div class="line"><a name="l01674"></a><span class="lineno"> 1674</span> <span class="comment"> lo[%$kAngleDimLabel] = -60/2</span></div><div class="line"><a name="l01675"></a><span class="lineno"> 1675</span> <span class="comment"> hi[%$kAngleDimLabel] = +60/2</span></div><div class="line"><a name="l01676"></a><span class="lineno"> 1676</span> <span class="comment"> un[%$kAngleDimLabel] = "°"</span></div><div class="line"><a name="l01677"></a><span class="lineno"> 1677</span> <span class="comment"> ax[%$kAngleDimLabel] = "angle"</span></div><div class="line"><a name="l01678"></a><span class="lineno"> 1678</span> <span class="comment"> break</span></div><div class="line"><a name="l01679"></a><span class="lineno"> 1679</span> <span class="comment"> case "Transmission":</span></div><div class="line"><a name="l01680"></a><span class="lineno"> 1680</span> <span class="comment"> un[%$kAngleDimLabel] = "arb."</span></div><div class="line"><a name="l01681"></a><span class="lineno"> 1681</span> <span class="comment"> ax[%$kAngleDimLabel] = "offset"</span></div><div class="line"><a name="l01682"></a><span class="lineno"> 1682</span> <span class="comment"> break</span></div><div class="line"><a name="l01683"></a><span class="lineno"> 1683</span> <span class="comment"> endswitch</span></div><div class="line"><a name="l01684"></a><span class="lineno"> 1684</span> <span class="comment"> endif</span></div><div class="line"><a name="l01685"></a><span class="lineno"> 1685</span> <span class="comment"> </span></div><div class="line"><a name="l01686"></a><span class="lineno"> 1686</span> <span class="comment"> // best option if scales are explicit in separate waves</span></div><div class="line"><a name="l01687"></a><span class="lineno"> 1687</span> <span class="comment"> if (waveexists(ChannelBegin) && waveexists(ChannelEnd) && (numpnts(ChannelBegin) >= 1) && (numpnts(ChannelEnd) >= 1))</span></div><div class="line"><a name="l01688"></a><span class="lineno"> 1688</span> <span class="comment"> lo[%$kEnergyDimLabel] = ChannelBegin[0]</span></div><div class="line"><a name="l01689"></a><span class="lineno"> 1689</span> <span class="comment"> hi[%$kEnergyDimLabel] = ChannelEnd[0]</span></div><div class="line"><a name="l01690"></a><span class="lineno"> 1690</span> <span class="comment"> endif</span></div><div class="line"><a name="l01691"></a><span class="lineno"> 1691</span> <span class="comment"> if (waveexists(SliceBegin) && waveexists(SliceEnd) && (numpnts(SliceBegin) >= 1) && (numpnts(SliceEnd) >= 1))</span></div><div class="line"><a name="l01692"></a><span class="lineno"> 1692</span> <span class="comment"> lo[%$kAngleDimLabel] = SliceBegin[0]</span></div><div class="line"><a name="l01693"></a><span class="lineno"> 1693</span> <span class="comment"> hi[%$kAngleDimLabel] = SliceEnd[0]</span></div><div class="line"><a name="l01694"></a><span class="lineno"> 1694</span> <span class="comment"> endif</span></div><div class="line"><a name="l01695"></a><span class="lineno"> 1695</span> <span class="comment"> </span></div><div class="line"><a name="l01696"></a><span class="lineno"> 1696</span> <span class="comment"> wave /z /t /SDFR=scanDF ScanWritables</span></div><div class="line"><a name="l01697"></a><span class="lineno"> 1697</span> <span class="comment"> if (WaveExists(ScanWritables))</span></div><div class="line"><a name="l01698"></a><span class="lineno"> 1698</span> <span class="comment"> wave /z /SDFR=scanDF scanner = $ScanWritables[0]</span></div><div class="line"><a name="l01699"></a><span class="lineno"> 1699</span> <span class="comment"> if (!WaveExists(scanner))</span></div><div class="line"><a name="l01700"></a><span class="lineno"> 1700</span> <span class="comment"> wave /z /SDFR=attrDF scanner = $ScanWritables[0]</span></div><div class="line"><a name="l01701"></a><span class="lineno"> 1701</span> <span class="comment"> endif</span></div><div class="line"><a name="l01702"></a><span class="lineno"> 1702</span> <span class="comment"> if (WaveExists(scanner) && (numpnts(scanner) >= 1))</span></div><div class="line"><a name="l01703"></a><span class="lineno"> 1703</span> <span class="comment"> lo[%$kScanDimLabel] = scanner[0]</span></div><div class="line"><a name="l01704"></a><span class="lineno"> 1704</span> <span class="comment"> hi[%$kScanDimLabel] = scanner[numpnts(scanner)-1]</span></div><div class="line"><a name="l01705"></a><span class="lineno"> 1705</span> <span class="comment"> ax[%$kScanDimLabel] = NameOfWave(scanner)</span></div><div class="line"><a name="l01706"></a><span class="lineno"> 1706</span> <span class="comment"> strswitch(NameOfWave(scanner))</span></div><div class="line"><a name="l01707"></a><span class="lineno"> 1707</span> <span class="comment"> case "Eph":</span></div><div class="line"><a name="l01708"></a><span class="lineno"> 1708</span> <span class="comment"> ax[%$kScanDimLabel] = "photon energy"</span></div><div class="line"><a name="l01709"></a><span class="lineno"> 1709</span> <span class="comment"> un[%$kScanDimLabel] = "eV"</span></div><div class="line"><a name="l01710"></a><span class="lineno"> 1710</span> <span class="comment"> break</span></div><div class="line"><a name="l01711"></a><span class="lineno"> 1711</span> <span class="comment"> case "ManipulatorX":</span></div><div class="line"><a name="l01712"></a><span class="lineno"> 1712</span> <span class="comment"> case "ManipulatorY":</span></div><div class="line"><a name="l01713"></a><span class="lineno"> 1713</span> <span class="comment"> case "ManipulatorZ":</span></div><div class="line"><a name="l01714"></a><span class="lineno"> 1714</span> <span class="comment"> case "FocusYTrans":</span></div><div class="line"><a name="l01715"></a><span class="lineno"> 1715</span> <span class="comment"> case "FocusZTrans":</span></div><div class="line"><a name="l01716"></a><span class="lineno"> 1716</span> <span class="comment"> case "RefocusYTrans":</span></div><div class="line"><a name="l01717"></a><span class="lineno"> 1717</span> <span class="comment"> case "RefocusZTrans":</span></div><div class="line"><a name="l01718"></a><span class="lineno"> 1718</span> <span class="comment"> case "ExitSlitY":</span></div><div class="line"><a name="l01719"></a><span class="lineno"> 1719</span> <span class="comment"> un[%$kScanDimLabel] = "mm"</span></div><div class="line"><a name="l01720"></a><span class="lineno"> 1720</span> <span class="comment"> break</span></div><div class="line"><a name="l01721"></a><span class="lineno"> 1721</span> <span class="comment"> case "ExitSlit":</span></div><div class="line"><a name="l01722"></a><span class="lineno"> 1722</span> <span class="comment"> un[%$kScanDimLabel] = "µm"</span></div><div class="line"><a name="l01723"></a><span class="lineno"> 1723</span> <span class="comment"> break</span></div><div class="line"><a name="l01724"></a><span class="lineno"> 1724</span> <span class="comment"> case "ManipulatorTheta":</span></div><div class="line"><a name="l01725"></a><span class="lineno"> 1725</span> <span class="comment"> case "ManipulatorTilt":</span></div><div class="line"><a name="l01726"></a><span class="lineno"> 1726</span> <span class="comment"> case "ManipulatorPhi":</span></div><div class="line"><a name="l01727"></a><span class="lineno"> 1727</span> <span class="comment"> un[%$kScanDimLabel] = "°"</span></div><div class="line"><a name="l01728"></a><span class="lineno"> 1728</span> <span class="comment"> break</span></div><div class="line"><a name="l01729"></a><span class="lineno"> 1729</span> <span class="comment"> case "FocusXRot":</span></div><div class="line"><a name="l01730"></a><span class="lineno"> 1730</span> <span class="comment"> case "FocusYRot":</span></div><div class="line"><a name="l01731"></a><span class="lineno"> 1731</span> <span class="comment"> case "FocusZRot":</span></div><div class="line"><a name="l01732"></a><span class="lineno"> 1732</span> <span class="comment"> case "RefocusXRot":</span></div><div class="line"><a name="l01733"></a><span class="lineno"> 1733</span> <span class="comment"> case "RefocusYRot":</span></div><div class="line"><a name="l01734"></a><span class="lineno"> 1734</span> <span class="comment"> case "RefocusZRot":</span></div><div class="line"><a name="l01735"></a><span class="lineno"> 1735</span> <span class="comment"> un[%$kScanDimLabel] = "mrad"</span></div><div class="line"><a name="l01736"></a><span class="lineno"> 1736</span> <span class="comment"> break</span></div><div class="line"><a name="l01737"></a><span class="lineno"> 1737</span> <span class="comment"> endswitch</span></div><div class="line"><a name="l01738"></a><span class="lineno"> 1738</span> <span class="comment"> endif</span></div><div class="line"><a name="l01739"></a><span class="lineno"> 1739</span> <span class="comment"> endif</span></div><div class="line"><a name="l01740"></a><span class="lineno"> 1740</span> <span class="comment">end</span></div><div class="line"><a name="l01741"></a><span class="lineno"> 1741</span> <span class="comment"></span></div><div class="line"><a name="l01781"></a><span class="lineno"><a class="line" href="pearl-pshell-import_8ipf.html#a2c456397c36d4116bfddca452eff5954"> 1781</a></span> <span class="comment">function ps_scale_dataset_2(data, ax, lo, hi, un)</span></div><div class="line"><a name="l01782"></a><span class="lineno"> 1782</span> <span class="comment"> wave data</span></div><div class="line"><a name="l01783"></a><span class="lineno"> 1783</span> <span class="comment"> wave /t ax</span></div><div class="line"><a name="l01784"></a><span class="lineno"> 1784</span> <span class="comment"> wave lo</span></div><div class="line"><a name="l01785"></a><span class="lineno"> 1785</span> <span class="comment"> wave hi</span></div><div class="line"><a name="l01786"></a><span class="lineno"> 1786</span> <span class="comment"> wave /t un</span></div><div class="line"><a name="l01787"></a><span class="lineno"> 1787</span> <span class="comment"> </span></div><div class="line"><a name="l01788"></a><span class="lineno"> 1788</span> <span class="comment"> string snote = note(data)</span></div><div class="line"><a name="l01789"></a><span class="lineno"> 1789</span> <span class="comment"> string sdim</span></div><div class="line"><a name="l01790"></a><span class="lineno"> 1790</span> <span class="comment"> sdim = GetDimLabel(data, 0, -1)</span></div><div class="line"><a name="l01791"></a><span class="lineno"> 1791</span> <span class="comment"> if (strlen(sdim))</span></div><div class="line"><a name="l01792"></a><span class="lineno"> 1792</span> <span class="comment"> setscale /i x lo[%$sdim], hi[%$sdim], un[%$sdim], data</span></div><div class="line"><a name="l01793"></a><span class="lineno"> 1793</span> <span class="comment"> snote = ReplaceStringByKey("AxisLabelX", snote, ax[%$sdim], "=", "\r")</span></div><div class="line"><a name="l01794"></a><span class="lineno"> 1794</span> <span class="comment"> endif</span></div><div class="line"><a name="l01795"></a><span class="lineno"> 1795</span> <span class="comment"></span></div><div class="line"><a name="l01796"></a><span class="lineno"> 1796</span> <span class="comment"> sdim = GetDimLabel(data, 1, -1)</span></div><div class="line"><a name="l01797"></a><span class="lineno"> 1797</span> <span class="comment"> if (strlen(sdim))</span></div><div class="line"><a name="l01798"></a><span class="lineno"> 1798</span> <span class="comment"> setscale /i y lo[%$sdim], hi[%$sdim], un[%$sdim], data</span></div><div class="line"><a name="l01799"></a><span class="lineno"> 1799</span> <span class="comment"> snote = ReplaceStringByKey("AxisLabelY", snote, ax[%$sdim], "=", "\r")</span></div><div class="line"><a name="l01800"></a><span class="lineno"> 1800</span> <span class="comment"> endif</span></div><div class="line"><a name="l01801"></a><span class="lineno"> 1801</span> <span class="comment"> </span></div><div class="line"><a name="l01802"></a><span class="lineno"> 1802</span> <span class="comment"> sdim = GetDimLabel(data, 2, -1)</span></div><div class="line"><a name="l01803"></a><span class="lineno"> 1803</span> <span class="comment"> if (strlen(sdim))</span></div><div class="line"><a name="l01804"></a><span class="lineno"> 1804</span> <span class="comment"> setscale /i z lo[%$sdim], hi[%$sdim], un[%$sdim], data</span></div><div class="line"><a name="l01805"></a><span class="lineno"> 1805</span> <span class="comment"> snote = ReplaceStringByKey("AxisLabelZ", snote, ax[%$sdim], "=", "\r")</span></div><div class="line"><a name="l01806"></a><span class="lineno"> 1806</span> <span class="comment"> endif</span></div><div class="line"><a name="l01807"></a><span class="lineno"> 1807</span> <span class="comment"></span></div><div class="line"><a name="l01808"></a><span class="lineno"> 1808</span> <span class="comment"> string data_unit = un[%$kDataDimLabel]</span></div><div class="line"><a name="l01809"></a><span class="lineno"> 1809</span> <span class="comment"> string data_label = ax[%$kDataDimLabel]</span></div><div class="line"><a name="l01810"></a><span class="lineno"> 1810</span> <span class="comment"> string s</span></div><div class="line"><a name="l01811"></a><span class="lineno"> 1811</span> <span class="comment"> variable def = (cmpstr(data_unit, "arb.") == 0) && (cmpstr(data_label, "value") == 0)</span></div><div class="line"><a name="l01812"></a><span class="lineno"> 1812</span> <span class="comment"> </span></div><div class="line"><a name="l01813"></a><span class="lineno"> 1813</span> <span class="comment"> if (def)</span></div><div class="line"><a name="l01814"></a><span class="lineno"> 1814</span> <span class="comment"> s = StringByKey("AxisLabelD", snote, "=", "\r")</span></div><div class="line"><a name="l01815"></a><span class="lineno"> 1815</span> <span class="comment"> if (strlen(s) > 0)</span></div><div class="line"><a name="l01816"></a><span class="lineno"> 1816</span> <span class="comment"> data_label = s</span></div><div class="line"><a name="l01817"></a><span class="lineno"> 1817</span> <span class="comment"> def = 0</span></div><div class="line"><a name="l01818"></a><span class="lineno"> 1818</span> <span class="comment"> endif</span></div><div class="line"><a name="l01819"></a><span class="lineno"> 1819</span> <span class="comment"> s = StringByKey("AxisUnitD", snote, "=", "\r")</span></div><div class="line"><a name="l01820"></a><span class="lineno"> 1820</span> <span class="comment"> if (strlen(s) > 0)</span></div><div class="line"><a name="l01821"></a><span class="lineno"> 1821</span> <span class="comment"> data_unit = s</span></div><div class="line"><a name="l01822"></a><span class="lineno"> 1822</span> <span class="comment"> def = 0</span></div><div class="line"><a name="l01823"></a><span class="lineno"> 1823</span> <span class="comment"> endif</span></div><div class="line"><a name="l01824"></a><span class="lineno"> 1824</span> <span class="comment"> endif</span></div><div class="line"><a name="l01825"></a><span class="lineno"> 1825</span> <span class="comment"> </span></div><div class="line"><a name="l01826"></a><span class="lineno"> 1826</span> <span class="comment"> if (def)</span></div><div class="line"><a name="l01827"></a><span class="lineno"> 1827</span> <span class="comment"> strswitch(NameOfWave(data))</span></div><div class="line"><a name="l01828"></a><span class="lineno"> 1828</span> <span class="comment"> case "ScientaImage":</span></div><div class="line"><a name="l01829"></a><span class="lineno"> 1829</span> <span class="comment"> case "ImageAngleDistribution":</span></div><div class="line"><a name="l01830"></a><span class="lineno"> 1830</span> <span class="comment"> case "ScientaAngleDistribution":</span></div><div class="line"><a name="l01831"></a><span class="lineno"> 1831</span> <span class="comment"> case "ScientaSpectrum":</span></div><div class="line"><a name="l01832"></a><span class="lineno"> 1832</span> <span class="comment"> case "ImageEnergyDistribution":</span></div><div class="line"><a name="l01833"></a><span class="lineno"> 1833</span> <span class="comment"> case "ScientaEnergyDistribution":</span></div><div class="line"><a name="l01834"></a><span class="lineno"> 1834</span> <span class="comment"> data *= kDetectorSensitivity</span></div><div class="line"><a name="l01835"></a><span class="lineno"> 1835</span> <span class="comment"> data_unit = "counts"</span></div><div class="line"><a name="l01836"></a><span class="lineno"> 1836</span> <span class="comment"> data_label = "intensity"</span></div><div class="line"><a name="l01837"></a><span class="lineno"> 1837</span> <span class="comment"> def = 0</span></div><div class="line"><a name="l01838"></a><span class="lineno"> 1838</span> <span class="comment"> break</span></div><div class="line"><a name="l01839"></a><span class="lineno"> 1839</span> <span class="comment"> case "SampleCurrent":</span></div><div class="line"><a name="l01840"></a><span class="lineno"> 1840</span> <span class="comment"> case "RefCurrent":</span></div><div class="line"><a name="l01841"></a><span class="lineno"> 1841</span> <span class="comment"> case "AuxCurrent":</span></div><div class="line"><a name="l01842"></a><span class="lineno"> 1842</span> <span class="comment"> data_unit = "A"</span></div><div class="line"><a name="l01843"></a><span class="lineno"> 1843</span> <span class="comment"> data_label = "current"</span></div><div class="line"><a name="l01844"></a><span class="lineno"> 1844</span> <span class="comment"> def = 0</span></div><div class="line"><a name="l01845"></a><span class="lineno"> 1845</span> <span class="comment"> break</span></div><div class="line"><a name="l01846"></a><span class="lineno"> 1846</span> <span class="comment"> case "MachineCurrent":</span></div><div class="line"><a name="l01847"></a><span class="lineno"> 1847</span> <span class="comment"> data_unit = "mA"</span></div><div class="line"><a name="l01848"></a><span class="lineno"> 1848</span> <span class="comment"> data_label = "current"</span></div><div class="line"><a name="l01849"></a><span class="lineno"> 1849</span> <span class="comment"> def = 0</span></div><div class="line"><a name="l01850"></a><span class="lineno"> 1850</span> <span class="comment"> break</span></div><div class="line"><a name="l01851"></a><span class="lineno"> 1851</span> <span class="comment"> endswitch</span></div><div class="line"><a name="l01852"></a><span class="lineno"> 1852</span> <span class="comment"> endif</span></div><div class="line"><a name="l01853"></a><span class="lineno"> 1853</span> <span class="comment"> </span></div><div class="line"><a name="l01854"></a><span class="lineno"> 1854</span> <span class="comment"> setscale d 0, 0, data_unit, data</span></div><div class="line"><a name="l01855"></a><span class="lineno"> 1855</span> <span class="comment"> snote = ReplaceStringByKey("AxisLabelD", snote, data_label, "=", "\r")</span></div><div class="line"><a name="l01856"></a><span class="lineno"> 1856</span> <span class="comment"> snote = ReplaceStringByKey("AxisUnitD", snote, data_unit, "=", "\r")</span></div><div class="line"><a name="l01857"></a><span class="lineno"> 1857</span> <span class="comment"> snote = ReplaceStringByKey("Dataset", snote, NameOfWave(data), "=", "\r")</span></div><div class="line"><a name="l01858"></a><span class="lineno"> 1858</span> <span class="comment"> note /k data, snote</span></div><div class="line"><a name="l01859"></a><span class="lineno"> 1859</span> <span class="comment">end</span></div><div class="line"><a name="l01860"></a><span class="lineno"> 1860</span> <span class="comment"></span></div><div class="line"><a name="l01911"></a><span class="lineno"><a class="line" href="pearl-pshell-import_8ipf.html#a3eefc2f84a09f2ce29893c71ef44ae32"> 1911</a></span> <span class="comment">function /s psh5_load_reduced(ANickName, APathName, AFileName, reduction_func, reduction_param, [progress, nthreads])</span></div><div class="line"><a name="l01912"></a><span class="lineno"> 1912</span> <span class="comment"> string ANickName</span></div><div class="line"><a name="l01913"></a><span class="lineno"> 1913</span> <span class="comment"> string APathName</span></div><div class="line"><a name="l01914"></a><span class="lineno"> 1914</span> <span class="comment"> string AFileName</span></div><div class="line"><a name="l01915"></a><span class="lineno"> 1915</span> <span class="comment"> funcref adh5_default_reduction reduction_func</span></div><div class="line"><a name="l01916"></a><span class="lineno"> 1916</span> <span class="comment"> string reduction_param</span></div><div class="line"><a name="l01917"></a><span class="lineno"> 1917</span> <span class="comment"> variable progress</span></div><div class="line"><a name="l01918"></a><span class="lineno"> 1918</span> <span class="comment"> variable nthreads</span></div><div class="line"><a name="l01919"></a><span class="lineno"> 1919</span> <span class="comment"> </span></div><div class="line"><a name="l01920"></a><span class="lineno"> 1920</span> <span class="comment"> if (ParamIsDefault(progress))</span></div><div class="line"><a name="l01921"></a><span class="lineno"> 1921</span> <span class="comment"> progress = 1</span></div><div class="line"><a name="l01922"></a><span class="lineno"> 1922</span> <span class="comment"> endif</span></div><div class="line"><a name="l01923"></a><span class="lineno"> 1923</span> <span class="comment"> if (ParamIsDefault(nthreads))</span></div><div class="line"><a name="l01924"></a><span class="lineno"> 1924</span> <span class="comment"> nthreads = -1</span></div><div class="line"><a name="l01925"></a><span class="lineno"> 1925</span> <span class="comment"> endif</span></div><div class="line"><a name="l01926"></a><span class="lineno"> 1926</span> <span class="comment"></span></div><div class="line"><a name="l01927"></a><span class="lineno"> 1927</span> <span class="comment"> dfref saveDF = GetDataFolderDFR()</span></div><div class="line"><a name="l01928"></a><span class="lineno"> 1928</span> <span class="comment"></span></div><div class="line"><a name="l01929"></a><span class="lineno"> 1929</span> <span class="comment"> // performance monitoring</span></div><div class="line"><a name="l01930"></a><span class="lineno"> 1930</span> <span class="comment"> variable timerRefNum</span></div><div class="line"><a name="l01931"></a><span class="lineno"> 1931</span> <span class="comment"> variable /g psh5_perf_secs</span></div><div class="line"><a name="l01932"></a><span class="lineno"> 1932</span> <span class="comment"> timerRefNum = startMSTimer</span></div><div class="line"><a name="l01933"></a><span class="lineno"> 1933</span> <span class="comment"></span></div><div class="line"><a name="l01934"></a><span class="lineno"> 1934</span> <span class="comment"> variable fileID = psh5_open_file(ANickName, APathName, AFileName)</span></div><div class="line"><a name="l01935"></a><span class="lineno"> 1935</span> <span class="comment"> string wavenames = ""</span></div><div class="line"><a name="l01936"></a><span class="lineno"> 1936</span> <span class="comment"> if (fileID)</span></div><div class="line"><a name="l01937"></a><span class="lineno"> 1937</span> <span class="comment"> dfref fileDF = GetDataFolderDFR()</span></div><div class="line"><a name="l01938"></a><span class="lineno"> 1938</span> <span class="comment"> svar s_filepath</span></div><div class="line"><a name="l01939"></a><span class="lineno"> 1939</span> <span class="comment"> svar s_scanpaths</span></div><div class="line"><a name="l01940"></a><span class="lineno"> 1940</span> <span class="comment"> AFileName = s_filepath</span></div><div class="line"><a name="l01941"></a><span class="lineno"> 1941</span> <span class="comment"> print "loading " + s_filepath + "\r"</span></div><div class="line"><a name="l01942"></a><span class="lineno"> 1942</span> <span class="comment"> </span></div><div class="line"><a name="l01943"></a><span class="lineno"> 1943</span> <span class="comment"> variable ig = 0</span></div><div class="line"><a name="l01944"></a><span class="lineno"> 1944</span> <span class="comment"> variable ng = ItemsInList(s_scanpaths)</span></div><div class="line"><a name="l01945"></a><span class="lineno"> 1945</span> <span class="comment"> string scanpath</span></div><div class="line"><a name="l01946"></a><span class="lineno"> 1946</span> <span class="comment"> string folder</span></div><div class="line"><a name="l01947"></a><span class="lineno"> 1947</span> <span class="comment"> string positioners</span></div><div class="line"><a name="l01948"></a><span class="lineno"> 1948</span> <span class="comment"> string positioner</span></div><div class="line"><a name="l01949"></a><span class="lineno"> 1949</span> <span class="comment"> string positionerpath</span></div><div class="line"><a name="l01950"></a><span class="lineno"> 1950</span> <span class="comment"> </span></div><div class="line"><a name="l01951"></a><span class="lineno"> 1951</span> <span class="comment"> scanpath = StringFromList(ig, s_scanpaths)</span></div><div class="line"><a name="l01952"></a><span class="lineno"> 1952</span> <span class="comment"> folder = ReplaceString("/", scanpath, "")</span></div><div class="line"><a name="l01953"></a><span class="lineno"> 1953</span> <span class="comment"> folder = ReplaceString(" ", folder, "")</span></div><div class="line"><a name="l01954"></a><span class="lineno"> 1954</span> <span class="comment"> folder = PearlCleanupName(folder)</span></div><div class="line"><a name="l01955"></a><span class="lineno"> 1955</span> <span class="comment"> setdatafolder fileDF</span></div><div class="line"><a name="l01956"></a><span class="lineno"> 1956</span> <span class="comment"> newdatafolder /s /o $folder</span></div><div class="line"><a name="l01957"></a><span class="lineno"> 1957</span> <span class="comment"> dfref dataDF = GetDataFolderDFR()</span></div><div class="line"><a name="l01958"></a><span class="lineno"> 1958</span> <span class="comment"> positioners = psh5_load_scan_meta(fileID, scanpath)</span></div><div class="line"><a name="l01959"></a><span class="lineno"> 1959</span> <span class="comment"> newdatafolder /s /o attr</span></div><div class="line"><a name="l01960"></a><span class="lineno"> 1960</span> <span class="comment"> killwaves /a/z</span></div><div class="line"><a name="l01961"></a><span class="lineno"> 1961</span> <span class="comment"> psh5_load_scan_attrs(fileID, scanpath)</span></div><div class="line"><a name="l01962"></a><span class="lineno"> 1962</span> <span class="comment"> setdatafolder dataDF</span></div><div class="line"><a name="l01963"></a><span class="lineno"> 1963</span> <span class="comment"> wave /t /z ScanWritables</span></div><div class="line"><a name="l01964"></a><span class="lineno"> 1964</span> <span class="comment"> if (waveexists(ScanWritables) && (numpnts(ScanWritables) >= 1))</span></div><div class="line"><a name="l01965"></a><span class="lineno"> 1965</span> <span class="comment"> positioner = ScanWritables[0]</span></div><div class="line"><a name="l01966"></a><span class="lineno"> 1966</span> <span class="comment"> if (strlen(positioner) > 0)</span></div><div class="line"><a name="l01967"></a><span class="lineno"> 1967</span> <span class="comment"> positionerpath = scanpath + "/" + positioner</span></div><div class="line"><a name="l01968"></a><span class="lineno"> 1968</span> <span class="comment"> positionerpath = ReplaceString("//", positionerpath, "/")</span></div><div class="line"><a name="l01969"></a><span class="lineno"> 1969</span> <span class="comment"> HDF5LoadData /O /Q /Z fileID, positionerpath</span></div><div class="line"><a name="l01970"></a><span class="lineno"> 1970</span> <span class="comment"> endif</span></div><div class="line"><a name="l01971"></a><span class="lineno"> 1971</span> <span class="comment"> endif</span></div><div class="line"><a name="l01972"></a><span class="lineno"> 1972</span> <span class="comment"> </span></div><div class="line"><a name="l01973"></a><span class="lineno"> 1973</span> <span class="comment"> setdatafolder dataDF</span></div><div class="line"><a name="l01974"></a><span class="lineno"> 1974</span> <span class="comment"> string datasets = psh5_list_scan_datasets(fileID, scanpath, include_regions=1)</span></div><div class="line"><a name="l01975"></a><span class="lineno"> 1975</span> <span class="comment"> string dataset = select_dataset(datasets, "ScientaImage")</span></div><div class="line"><a name="l01976"></a><span class="lineno"> 1976</span> <span class="comment"> wavenames = psh5_load_dataset_reduced(fileID, scanpath, dataset, reduction_func, reduction_param, progress=progress, nthreads=nthreads)</span></div><div class="line"><a name="l01977"></a><span class="lineno"> 1977</span> <span class="comment"></span></div><div class="line"><a name="l01978"></a><span class="lineno"> 1978</span> <span class="comment"> psh5_close_file(fileID)</span></div><div class="line"><a name="l01979"></a><span class="lineno"> 1979</span> <span class="comment"> endif</span></div><div class="line"><a name="l01980"></a><span class="lineno"> 1980</span> <span class="comment"></span></div><div class="line"><a name="l01981"></a><span class="lineno"> 1981</span> <span class="comment"> if (timerRefNum >= 0)</span></div><div class="line"><a name="l01982"></a><span class="lineno"> 1982</span> <span class="comment"> psh5_perf_secs = stopMSTimer(timerRefNum) / 1e6</span></div><div class="line"><a name="l01983"></a><span class="lineno"> 1983</span> <span class="comment"> endif</span></div><div class="line"><a name="l01984"></a><span class="lineno"> 1984</span> <span class="comment"> </span></div><div class="line"><a name="l01985"></a><span class="lineno"> 1985</span> <span class="comment"> setdatafolder saveDF</span></div><div class="line"><a name="l01986"></a><span class="lineno"> 1986</span> <span class="comment"> return wavenames</span></div><div class="line"><a name="l01987"></a><span class="lineno"> 1987</span> <span class="comment">end</span></div><div class="line"><a name="l01988"></a><span class="lineno"> 1988</span> <span class="comment"></span></div><div class="line"><a name="l01989"></a><span class="lineno"> 1989</span> <span class="comment"></span></div><div class="line"><a name="l02040"></a><span class="lineno"><a class="line" href="pearl-pshell-import_8ipf.html#a13a45e8618c1ab7406e1aa5e608e21fe"> 2040</a></span> <span class="comment">function /s psh5_load_dataset_reduced(fileID, scanpath, datasetname, reduction_func, reduction_param, [progress, nthreads])</span></div><div class="line"><a name="l02041"></a><span class="lineno"> 2041</span> <span class="comment"> variable fileID</span></div><div class="line"><a name="l02042"></a><span class="lineno"> 2042</span> <span class="comment"> string scanpath</span></div><div class="line"><a name="l02043"></a><span class="lineno"> 2043</span> <span class="comment"> string datasetname</span></div><div class="line"><a name="l02044"></a><span class="lineno"> 2044</span> <span class="comment"> funcref adh5_default_reduction reduction_func</span></div><div class="line"><a name="l02045"></a><span class="lineno"> 2045</span> <span class="comment"> string reduction_param</span></div><div class="line"><a name="l02046"></a><span class="lineno"> 2046</span> <span class="comment"> variable progress</span></div><div class="line"><a name="l02047"></a><span class="lineno"> 2047</span> <span class="comment"> variable nthreads</span></div><div class="line"><a name="l02048"></a><span class="lineno"> 2048</span> <span class="comment"> </span></div><div class="line"><a name="l02049"></a><span class="lineno"> 2049</span> <span class="comment"> if (ParamIsDefault(progress))</span></div><div class="line"><a name="l02050"></a><span class="lineno"> 2050</span> <span class="comment"> progress = 1</span></div><div class="line"><a name="l02051"></a><span class="lineno"> 2051</span> <span class="comment"> endif</span></div><div class="line"><a name="l02052"></a><span class="lineno"> 2052</span> <span class="comment"> if (ParamIsDefault(nthreads))</span></div><div class="line"><a name="l02053"></a><span class="lineno"> 2053</span> <span class="comment"> nthreads = -1</span></div><div class="line"><a name="l02054"></a><span class="lineno"> 2054</span> <span class="comment"> endif</span></div><div class="line"><a name="l02055"></a><span class="lineno"> 2055</span> <span class="comment"> </span></div><div class="line"><a name="l02056"></a><span class="lineno"> 2056</span> <span class="comment"> dfref base_df = GetDataFolderDFR()</span></div><div class="line"><a name="l02057"></a><span class="lineno"> 2057</span> <span class="comment"> variable result = 0</span></div><div class="line"><a name="l02058"></a><span class="lineno"> 2058</span> <span class="comment"> string datasetpath</span></div><div class="line"><a name="l02059"></a><span class="lineno"> 2059</span> <span class="comment"> string datawavename</span></div><div class="line"><a name="l02060"></a><span class="lineno"> 2060</span> <span class="comment"> string wavenames = ""</span></div><div class="line"><a name="l02061"></a><span class="lineno"> 2061</span> <span class="comment"></span></div><div class="line"><a name="l02062"></a><span class="lineno"> 2062</span> <span class="comment"> datasetpath = scanpath + "/" + datasetname</span></div><div class="line"><a name="l02063"></a><span class="lineno"> 2063</span> <span class="comment"> datasetpath = ReplaceString("//", datasetpath, "/")</span></div><div class="line"><a name="l02064"></a><span class="lineno"> 2064</span> <span class="comment"> datawavename = StringFromList(ItemsInList(datasetpath, "/") - 1, datasetpath, "/")</span></div><div class="line"><a name="l02065"></a><span class="lineno"> 2065</span> <span class="comment"> </span></div><div class="line"><a name="l02066"></a><span class="lineno"> 2066</span> <span class="comment"> string regionname</span></div><div class="line"><a name="l02067"></a><span class="lineno"> 2067</span> <span class="comment"> string regionpath</span></div><div class="line"><a name="l02068"></a><span class="lineno"> 2068</span> <span class="comment"> if (ItemsInList(datasetname, "/") >= 2)</span></div><div class="line"><a name="l02069"></a><span class="lineno"> 2069</span> <span class="comment"> regionname = StringFromList(0, datasetname, "/")</span></div><div class="line"><a name="l02070"></a><span class="lineno"> 2070</span> <span class="comment"> regionpath = ReplaceString("//", scanpath + "/" + regionname, "/")</span></div><div class="line"><a name="l02071"></a><span class="lineno"> 2071</span> <span class="comment"> datasetname = RemoveListItem(0, datasetname, "/")</span></div><div class="line"><a name="l02072"></a><span class="lineno"> 2072</span> <span class="comment"> NewDataFolder /o/s $regionname</span></div><div class="line"><a name="l02073"></a><span class="lineno"> 2073</span> <span class="comment"> else</span></div><div class="line"><a name="l02074"></a><span class="lineno"> 2074</span> <span class="comment"> regionname = ""</span></div><div class="line"><a name="l02075"></a><span class="lineno"> 2075</span> <span class="comment"> regionpath = scanpath</span></div><div class="line"><a name="l02076"></a><span class="lineno"> 2076</span> <span class="comment"> endif</span></div><div class="line"><a name="l02077"></a><span class="lineno"> 2077</span> <span class="comment"></span></div><div class="line"><a name="l02078"></a><span class="lineno"> 2078</span> <span class="comment"> STRUCT HDF5DataInfo di // Defined in HDF5 Browser.ipf.</span></div><div class="line"><a name="l02079"></a><span class="lineno"> 2079</span> <span class="comment"> InitHDF5DataInfo(di)</span></div><div class="line"><a name="l02080"></a><span class="lineno"> 2080</span> <span class="comment"> variable err = HDF5DatasetInfo(fileID, datasetpath, 0, di)</span></div><div class="line"><a name="l02081"></a><span class="lineno"> 2081</span> <span class="comment"> if (err != 0)</span></div><div class="line"><a name="l02082"></a><span class="lineno"> 2082</span> <span class="comment"> print "error accessing detector/data"</span></div><div class="line"><a name="l02083"></a><span class="lineno"> 2083</span> <span class="comment"> result = -1</span></div><div class="line"><a name="l02084"></a><span class="lineno"> 2084</span> <span class="comment"> return wavenames</span></div><div class="line"><a name="l02085"></a><span class="lineno"> 2085</span> <span class="comment"> endif</span></div><div class="line"><a name="l02086"></a><span class="lineno"> 2086</span> <span class="comment"> if (di.ndims < 2)</span></div><div class="line"><a name="l02087"></a><span class="lineno"> 2087</span> <span class="comment"> print "error: rank of dataset < 2"</span></div><div class="line"><a name="l02088"></a><span class="lineno"> 2088</span> <span class="comment"> result = -2</span></div><div class="line"><a name="l02089"></a><span class="lineno"> 2089</span> <span class="comment"> return wavenames</span></div><div class="line"><a name="l02090"></a><span class="lineno"> 2090</span> <span class="comment"> elseif (di.ndims < 3)</span></div><div class="line"><a name="l02091"></a><span class="lineno"> 2091</span> <span class="comment"> progress = 0</span></div><div class="line"><a name="l02092"></a><span class="lineno"> 2092</span> <span class="comment"> endif</span></div><div class="line"><a name="l02093"></a><span class="lineno"> 2093</span> <span class="comment"> </span></div><div class="line"><a name="l02094"></a><span class="lineno"> 2094</span> <span class="comment"> variable idx, idy, idz, idt</span></div><div class="line"><a name="l02095"></a><span class="lineno"> 2095</span> <span class="comment"> variable transpose = WhichListItem(datawavename, kTransposedDatasets) >= 0</span></div><div class="line"><a name="l02096"></a><span class="lineno"> 2096</span> <span class="comment"> if (transpose)</span></div><div class="line"><a name="l02097"></a><span class="lineno"> 2097</span> <span class="comment"> idx = 1</span></div><div class="line"><a name="l02098"></a><span class="lineno"> 2098</span> <span class="comment"> idy = 0</span></div><div class="line"><a name="l02099"></a><span class="lineno"> 2099</span> <span class="comment"> else</span></div><div class="line"><a name="l02100"></a><span class="lineno"> 2100</span> <span class="comment"> idx = 0</span></div><div class="line"><a name="l02101"></a><span class="lineno"> 2101</span> <span class="comment"> idy = 1</span></div><div class="line"><a name="l02102"></a><span class="lineno"> 2102</span> <span class="comment"> endif</span></div><div class="line"><a name="l02103"></a><span class="lineno"> 2103</span> <span class="comment"> idz = 2</span></div><div class="line"><a name="l02104"></a><span class="lineno"> 2104</span> <span class="comment"> idt = 3</span></div><div class="line"><a name="l02105"></a><span class="lineno"> 2105</span> <span class="comment"> </span></div><div class="line"><a name="l02106"></a><span class="lineno"> 2106</span> <span class="comment"> variable nx, ny, nz, nt, nzt</span></div><div class="line"><a name="l02107"></a><span class="lineno"> 2107</span> <span class="comment"> nx = di.dims[idx]</span></div><div class="line"><a name="l02108"></a><span class="lineno"> 2108</span> <span class="comment"> ny = di.dims[idy]</span></div><div class="line"><a name="l02109"></a><span class="lineno"> 2109</span> <span class="comment"> nz = di.dims[idz]</span></div><div class="line"><a name="l02110"></a><span class="lineno"> 2110</span> <span class="comment"> nt = di.dims[idt]</span></div><div class="line"><a name="l02111"></a><span class="lineno"> 2111</span> <span class="comment"> // adjust singleton dimensions</span></div><div class="line"><a name="l02112"></a><span class="lineno"> 2112</span> <span class="comment"> nz = max(nz, 1)</span></div><div class="line"><a name="l02113"></a><span class="lineno"> 2113</span> <span class="comment"> nt = max(nt, 1)</span></div><div class="line"><a name="l02114"></a><span class="lineno"> 2114</span> <span class="comment"> nzt = nz * nt</span></div><div class="line"><a name="l02115"></a><span class="lineno"> 2115</span> <span class="comment"> </span></div><div class="line"><a name="l02116"></a><span class="lineno"> 2116</span> <span class="comment"> // load data image by image</span></div><div class="line"><a name="l02117"></a><span class="lineno"> 2117</span> <span class="comment"> HDF5MakeHyperslabWave("slab", max(di.ndims, 4))</span></div><div class="line"><a name="l02118"></a><span class="lineno"> 2118</span> <span class="comment"> wave slab</span></div><div class="line"><a name="l02119"></a><span class="lineno"> 2119</span> <span class="comment"> slab[][%Start] = 0</span></div><div class="line"><a name="l02120"></a><span class="lineno"> 2120</span> <span class="comment"> slab[][%Stride] = 1</span></div><div class="line"><a name="l02121"></a><span class="lineno"> 2121</span> <span class="comment"> slab[][%Count] = 1</span></div><div class="line"><a name="l02122"></a><span class="lineno"> 2122</span> <span class="comment"> slab[][%Block] = 1</span></div><div class="line"><a name="l02123"></a><span class="lineno"> 2123</span> <span class="comment"> slab[idx][%Block] = nx</span></div><div class="line"><a name="l02124"></a><span class="lineno"> 2124</span> <span class="comment"> slab[idy][%Block] = ny</span></div><div class="line"><a name="l02125"></a><span class="lineno"> 2125</span> <span class="comment"> </span></div><div class="line"><a name="l02126"></a><span class="lineno"> 2126</span> <span class="comment"> // set up multi threading</span></div><div class="line"><a name="l02127"></a><span class="lineno"> 2127</span> <span class="comment"> if (nthreads < 0)</span></div><div class="line"><a name="l02128"></a><span class="lineno"> 2128</span> <span class="comment"> nthreads = ThreadProcessorCount</span></div><div class="line"><a name="l02129"></a><span class="lineno"> 2129</span> <span class="comment"> endif</span></div><div class="line"><a name="l02130"></a><span class="lineno"> 2130</span> <span class="comment"> if (nthreads > 0)</span></div><div class="line"><a name="l02131"></a><span class="lineno"> 2131</span> <span class="comment"> variable threadGroupID = ThreadGroupCreate(nthreads)</span></div><div class="line"><a name="l02132"></a><span class="lineno"> 2132</span> <span class="comment"> variable ithread</span></div><div class="line"><a name="l02133"></a><span class="lineno"> 2133</span> <span class="comment"> for (ithread = 0; ithread < nthreads; ithread += 1)</span></div><div class="line"><a name="l02134"></a><span class="lineno"> 2134</span> <span class="comment"> ThreadStart threadGroupID, ithread, reduce_slab_worker(reduction_func)</span></div><div class="line"><a name="l02135"></a><span class="lineno"> 2135</span> <span class="comment"> endfor</span></div><div class="line"><a name="l02136"></a><span class="lineno"> 2136</span> <span class="comment"> else</span></div><div class="line"><a name="l02137"></a><span class="lineno"> 2137</span> <span class="comment"> make /n=(nzt) /df /free processing_folders</span></div><div class="line"><a name="l02138"></a><span class="lineno"> 2138</span> <span class="comment"> endif</span></div><div class="line"><a name="l02139"></a><span class="lineno"> 2139</span> <span class="comment"> </span></div><div class="line"><a name="l02140"></a><span class="lineno"> 2140</span> <span class="comment"> if (progress)</span></div><div class="line"><a name="l02141"></a><span class="lineno"> 2141</span> <span class="comment"> display_progress_panel("HDF5 Import", "Loading data (step 1 of 2)...", nzt)</span></div><div class="line"><a name="l02142"></a><span class="lineno"> 2142</span> <span class="comment"> endif</span></div><div class="line"><a name="l02143"></a><span class="lineno"> 2143</span> <span class="comment"></span></div><div class="line"><a name="l02144"></a><span class="lineno"> 2144</span> <span class="comment"> // create a template wave with the correct scales and labels</span></div><div class="line"><a name="l02145"></a><span class="lineno"> 2145</span> <span class="comment"> make /n=(nx,ny) /d /o $datawavename</span></div><div class="line"><a name="l02146"></a><span class="lineno"> 2146</span> <span class="comment"> wave template = $datawavename</span></div><div class="line"><a name="l02147"></a><span class="lineno"> 2147</span> <span class="comment"> ps_set_dimlabels2(template, datawavename)</span></div><div class="line"><a name="l02148"></a><span class="lineno"> 2148</span> <span class="comment"> ps_scale_dataset(template)</span></div><div class="line"><a name="l02149"></a><span class="lineno"> 2149</span> <span class="comment"></span></div><div class="line"><a name="l02150"></a><span class="lineno"> 2150</span> <span class="comment"> variable iz, it, izt</span></div><div class="line"><a name="l02151"></a><span class="lineno"> 2151</span> <span class="comment"> string dfname</span></div><div class="line"><a name="l02152"></a><span class="lineno"> 2152</span> <span class="comment"> variable iw, nw</span></div><div class="line"><a name="l02153"></a><span class="lineno"> 2153</span> <span class="comment"> string sw</span></div><div class="line"><a name="l02154"></a><span class="lineno"> 2154</span> <span class="comment"> make /n=0 /free /wave result_waves</span></div><div class="line"><a name="l02155"></a><span class="lineno"> 2155</span> <span class="comment"> </span></div><div class="line"><a name="l02156"></a><span class="lineno"> 2156</span> <span class="comment"> izt = 0</span></div><div class="line"><a name="l02157"></a><span class="lineno"> 2157</span> <span class="comment"> for (iz = 0; iz < nz; iz += 1)</span></div><div class="line"><a name="l02158"></a><span class="lineno"> 2158</span> <span class="comment"> for (it = 0; it < nt; it += 1)</span></div><div class="line"><a name="l02159"></a><span class="lineno"> 2159</span> <span class="comment"> // load hyperslab</span></div><div class="line"><a name="l02160"></a><span class="lineno"> 2160</span> <span class="comment"> slab[idz][%Start] = iz</span></div><div class="line"><a name="l02161"></a><span class="lineno"> 2161</span> <span class="comment"> slab[idt][%Start] = it</span></div><div class="line"><a name="l02162"></a><span class="lineno"> 2162</span> <span class="comment"> dfname = "processing_" + num2str(izt)</span></div><div class="line"><a name="l02163"></a><span class="lineno"> 2163</span> <span class="comment"> newdatafolder /s $dfname</span></div><div class="line"><a name="l02164"></a><span class="lineno"> 2164</span> <span class="comment"> HDF5LoadData /O /Q /Z /SLAB=slab /N=slabdata fileID, datasetpath</span></div><div class="line"><a name="l02165"></a><span class="lineno"> 2165</span> <span class="comment"> </span></div><div class="line"><a name="l02166"></a><span class="lineno"> 2166</span> <span class="comment"> // send to processing queue</span></div><div class="line"><a name="l02167"></a><span class="lineno"> 2167</span> <span class="comment"> duplicate template, image</span></div><div class="line"><a name="l02168"></a><span class="lineno"> 2168</span> <span class="comment"> variable /g r_index = iz</span></div><div class="line"><a name="l02169"></a><span class="lineno"> 2169</span> <span class="comment"> variable /g s_index = it</span></div><div class="line"><a name="l02170"></a><span class="lineno"> 2170</span> <span class="comment"> string /g func_param = reduction_param</span></div><div class="line"><a name="l02171"></a><span class="lineno"> 2171</span> <span class="comment"></span></div><div class="line"><a name="l02172"></a><span class="lineno"> 2172</span> <span class="comment"> if (nthreads > 0)</span></div><div class="line"><a name="l02173"></a><span class="lineno"> 2173</span> <span class="comment"> WaveClear image</span></div><div class="line"><a name="l02174"></a><span class="lineno"> 2174</span> <span class="comment"> ThreadGroupPutDF threadGroupID, :</span></div><div class="line"><a name="l02175"></a><span class="lineno"> 2175</span> <span class="comment"> else</span></div><div class="line"><a name="l02176"></a><span class="lineno"> 2176</span> <span class="comment"> processing_folders[izt] = GetDataFolderDFR()</span></div><div class="line"><a name="l02177"></a><span class="lineno"> 2177</span> <span class="comment"> make /n=1/d profile1, profile2</span></div><div class="line"><a name="l02178"></a><span class="lineno"> 2178</span> <span class="comment"> wave slabdata</span></div><div class="line"><a name="l02179"></a><span class="lineno"> 2179</span> <span class="comment"> wave /wave reduced_waves = reduce_slab_image(slabdata, image, reduction_func, func_param)</span></div><div class="line"><a name="l02180"></a><span class="lineno"> 2180</span> <span class="comment"> variable /g func_result = numpnts(reduced_waves)</span></div><div class="line"><a name="l02181"></a><span class="lineno"> 2181</span> <span class="comment"> adh5_get_result_waves(reduced_waves, "redw_", 0)</span></div><div class="line"><a name="l02182"></a><span class="lineno"> 2182</span> <span class="comment"> WaveClear slabdata, image, reduced_waves</span></div><div class="line"><a name="l02183"></a><span class="lineno"> 2183</span> <span class="comment"> setdatafolder ::</span></div><div class="line"><a name="l02184"></a><span class="lineno"> 2184</span> <span class="comment"> endif</span></div><div class="line"><a name="l02185"></a><span class="lineno"> 2185</span> <span class="comment"> </span></div><div class="line"><a name="l02186"></a><span class="lineno"> 2186</span> <span class="comment"> izt += 1</span></div><div class="line"><a name="l02187"></a><span class="lineno"> 2187</span> <span class="comment"> // progress window</span></div><div class="line"><a name="l02188"></a><span class="lineno"> 2188</span> <span class="comment"> if (progress)</span></div><div class="line"><a name="l02189"></a><span class="lineno"> 2189</span> <span class="comment"> if (update_progress_panel(izt))</span></div><div class="line"><a name="l02190"></a><span class="lineno"> 2190</span> <span class="comment"> print "user abort"</span></div><div class="line"><a name="l02191"></a><span class="lineno"> 2191</span> <span class="comment"> result = -4</span></div><div class="line"><a name="l02192"></a><span class="lineno"> 2192</span> <span class="comment"> break</span></div><div class="line"><a name="l02193"></a><span class="lineno"> 2193</span> <span class="comment"> endif</span></div><div class="line"><a name="l02194"></a><span class="lineno"> 2194</span> <span class="comment"> endif</span></div><div class="line"><a name="l02195"></a><span class="lineno"> 2195</span> <span class="comment"> endfor</span></div><div class="line"><a name="l02196"></a><span class="lineno"> 2196</span> <span class="comment"> endfor</span></div><div class="line"><a name="l02197"></a><span class="lineno"> 2197</span> <span class="comment"> </span></div><div class="line"><a name="l02198"></a><span class="lineno"> 2198</span> <span class="comment"> killwaves /z slab, slabdata, template</span></div><div class="line"><a name="l02199"></a><span class="lineno"> 2199</span> <span class="comment"> if (progress)</span></div><div class="line"><a name="l02200"></a><span class="lineno"> 2200</span> <span class="comment"> update_progress_panel(0, message="Processing data (step 2 of 2)...")</span></div><div class="line"><a name="l02201"></a><span class="lineno"> 2201</span> <span class="comment"> endif</span></div><div class="line"><a name="l02202"></a><span class="lineno"> 2202</span> <span class="comment"></span></div><div class="line"><a name="l02203"></a><span class="lineno"> 2203</span> <span class="comment"> dfref dfr</span></div><div class="line"><a name="l02204"></a><span class="lineno"> 2204</span> <span class="comment"> for (izt = 0; (izt < nzt) && (result == 0); izt += 1)</span></div><div class="line"><a name="l02205"></a><span class="lineno"> 2205</span> <span class="comment"> if (nthreads > 0)</span></div><div class="line"><a name="l02206"></a><span class="lineno"> 2206</span> <span class="comment"> do</span></div><div class="line"><a name="l02207"></a><span class="lineno"> 2207</span> <span class="comment"> if (progress)</span></div><div class="line"><a name="l02208"></a><span class="lineno"> 2208</span> <span class="comment"> if (update_progress_panel(izt))</span></div><div class="line"><a name="l02209"></a><span class="lineno"> 2209</span> <span class="comment"> print "user abort"</span></div><div class="line"><a name="l02210"></a><span class="lineno"> 2210</span> <span class="comment"> result = -4</span></div><div class="line"><a name="l02211"></a><span class="lineno"> 2211</span> <span class="comment"> break</span></div><div class="line"><a name="l02212"></a><span class="lineno"> 2212</span> <span class="comment"> endif</span></div><div class="line"><a name="l02213"></a><span class="lineno"> 2213</span> <span class="comment"> endif</span></div><div class="line"><a name="l02214"></a><span class="lineno"> 2214</span> <span class="comment"> dfr = ThreadGroupGetDFR(threadGroupID, 1000)</span></div><div class="line"><a name="l02215"></a><span class="lineno"> 2215</span> <span class="comment"> if (DatafolderRefStatus(dfr) != 0)</span></div><div class="line"><a name="l02216"></a><span class="lineno"> 2216</span> <span class="comment"> break</span></div><div class="line"><a name="l02217"></a><span class="lineno"> 2217</span> <span class="comment"> endif</span></div><div class="line"><a name="l02218"></a><span class="lineno"> 2218</span> <span class="comment"> while (1)</span></div><div class="line"><a name="l02219"></a><span class="lineno"> 2219</span> <span class="comment"> else</span></div><div class="line"><a name="l02220"></a><span class="lineno"> 2220</span> <span class="comment"> if (progress)</span></div><div class="line"><a name="l02221"></a><span class="lineno"> 2221</span> <span class="comment"> if (update_progress_panel(izt))</span></div><div class="line"><a name="l02222"></a><span class="lineno"> 2222</span> <span class="comment"> print "user abort"</span></div><div class="line"><a name="l02223"></a><span class="lineno"> 2223</span> <span class="comment"> result = -4</span></div><div class="line"><a name="l02224"></a><span class="lineno"> 2224</span> <span class="comment"> break</span></div><div class="line"><a name="l02225"></a><span class="lineno"> 2225</span> <span class="comment"> endif</span></div><div class="line"><a name="l02226"></a><span class="lineno"> 2226</span> <span class="comment"> endif</span></div><div class="line"><a name="l02227"></a><span class="lineno"> 2227</span> <span class="comment"> dfr = processing_folders[izt]</span></div><div class="line"><a name="l02228"></a><span class="lineno"> 2228</span> <span class="comment"> endif</span></div><div class="line"><a name="l02229"></a><span class="lineno"> 2229</span> <span class="comment"> </span></div><div class="line"><a name="l02230"></a><span class="lineno"> 2230</span> <span class="comment"> if (result != 0)</span></div><div class="line"><a name="l02231"></a><span class="lineno"> 2231</span> <span class="comment"> break</span></div><div class="line"><a name="l02232"></a><span class="lineno"> 2232</span> <span class="comment"> endif</span></div><div class="line"><a name="l02233"></a><span class="lineno"> 2233</span> <span class="comment"> </span></div><div class="line"><a name="l02234"></a><span class="lineno"> 2234</span> <span class="comment"> nvar rr = dfr:r_index</span></div><div class="line"><a name="l02235"></a><span class="lineno"> 2235</span> <span class="comment"> nvar ss = dfr:s_index</span></div><div class="line"><a name="l02236"></a><span class="lineno"> 2236</span> <span class="comment"> nvar func_result = dfr:func_result</span></div><div class="line"><a name="l02237"></a><span class="lineno"> 2237</span> <span class="comment"></span></div><div class="line"><a name="l02238"></a><span class="lineno"> 2238</span> <span class="comment"> if (func_result < 1)</span></div><div class="line"><a name="l02239"></a><span class="lineno"> 2239</span> <span class="comment"> print "error during data reduction."</span></div><div class="line"><a name="l02240"></a><span class="lineno"> 2240</span> <span class="comment"> result = -3</span></div><div class="line"><a name="l02241"></a><span class="lineno"> 2241</span> <span class="comment"> break</span></div><div class="line"><a name="l02242"></a><span class="lineno"> 2242</span> <span class="comment"> endif</span></div><div class="line"><a name="l02243"></a><span class="lineno"> 2243</span> <span class="comment"></span></div><div class="line"><a name="l02244"></a><span class="lineno"> 2244</span> <span class="comment"> if (numpnts(result_waves) == 0)</span></div><div class="line"><a name="l02245"></a><span class="lineno"> 2245</span> <span class="comment"> redimension /n=(func_result) result_waves</span></div><div class="line"><a name="l02246"></a><span class="lineno"> 2246</span> <span class="comment"> for (iw = 0; iw < func_result; iw += 1)</span></div><div class="line"><a name="l02247"></a><span class="lineno"> 2247</span> <span class="comment"> sw = "redw_" + num2str(iw)</span></div><div class="line"><a name="l02248"></a><span class="lineno"> 2248</span> <span class="comment"> wave profile = dfr:$sw</span></div><div class="line"><a name="l02249"></a><span class="lineno"> 2249</span> <span class="comment"> sw = "ReducedData" + num2str(iw+1)</span></div><div class="line"><a name="l02250"></a><span class="lineno"> 2250</span> <span class="comment"> make /n=(dimsize(profile, 0), nz, nt) /d /o $sw</span></div><div class="line"><a name="l02251"></a><span class="lineno"> 2251</span> <span class="comment"> wave data = $sw</span></div><div class="line"><a name="l02252"></a><span class="lineno"> 2252</span> <span class="comment"> setdimlabel 0, -1, $getdimlabel(profile, 0, -1), data</span></div><div class="line"><a name="l02253"></a><span class="lineno"> 2253</span> <span class="comment"> setdimlabel 1, -1, $kScanDimLabel, data</span></div><div class="line"><a name="l02254"></a><span class="lineno"> 2254</span> <span class="comment"> note data, note(profile)</span></div><div class="line"><a name="l02255"></a><span class="lineno"> 2255</span> <span class="comment"> ps_scale_dataset(data)</span></div><div class="line"><a name="l02256"></a><span class="lineno"> 2256</span> <span class="comment"> setscale /p x dimoffset(profile, 0), dimdelta(profile, 0), waveunits(profile, 0), data</span></div><div class="line"><a name="l02257"></a><span class="lineno"> 2257</span> <span class="comment"> setscale d 0, 0, waveunits(profile, -1), data</span></div><div class="line"><a name="l02258"></a><span class="lineno"> 2258</span> <span class="comment"> result_waves[iw] = data</span></div><div class="line"><a name="l02259"></a><span class="lineno"> 2259</span> <span class="comment"> endfor</span></div><div class="line"><a name="l02260"></a><span class="lineno"> 2260</span> <span class="comment"> endif</span></div><div class="line"><a name="l02261"></a><span class="lineno"> 2261</span> <span class="comment"> for (iw = 0; iw < func_result; iw += 1)</span></div><div class="line"><a name="l02262"></a><span class="lineno"> 2262</span> <span class="comment"> sw = "redw_" + num2str(iw)</span></div><div class="line"><a name="l02263"></a><span class="lineno"> 2263</span> <span class="comment"> wave profile = dfr:$sw</span></div><div class="line"><a name="l02264"></a><span class="lineno"> 2264</span> <span class="comment"> wave data = result_waves[iw]</span></div><div class="line"><a name="l02265"></a><span class="lineno"> 2265</span> <span class="comment"> data[][rr][ss] = profile[p]</span></div><div class="line"><a name="l02266"></a><span class="lineno"> 2266</span> <span class="comment"> endfor</span></div><div class="line"><a name="l02267"></a><span class="lineno"> 2267</span> <span class="comment"> endfor</span></div><div class="line"><a name="l02268"></a><span class="lineno"> 2268</span> <span class="comment"> </span></div><div class="line"><a name="l02269"></a><span class="lineno"> 2269</span> <span class="comment"> if (nthreads > 0)</span></div><div class="line"><a name="l02270"></a><span class="lineno"> 2270</span> <span class="comment"> variable tstatus = ThreadGroupRelease(threadGroupID)</span></div><div class="line"><a name="l02271"></a><span class="lineno"> 2271</span> <span class="comment"> if (tstatus == -2)</span></div><div class="line"><a name="l02272"></a><span class="lineno"> 2272</span> <span class="comment"> print "error: thread did not terminate properly."</span></div><div class="line"><a name="l02273"></a><span class="lineno"> 2273</span> <span class="comment"> result = -5</span></div><div class="line"><a name="l02274"></a><span class="lineno"> 2274</span> <span class="comment"> endif</span></div><div class="line"><a name="l02275"></a><span class="lineno"> 2275</span> <span class="comment"> else</span></div><div class="line"><a name="l02276"></a><span class="lineno"> 2276</span> <span class="comment"> for (izt = 0; izt < nzt; izt += 1)</span></div><div class="line"><a name="l02277"></a><span class="lineno"> 2277</span> <span class="comment"> KillDataFolder /Z processing_folders[izt]</span></div><div class="line"><a name="l02278"></a><span class="lineno"> 2278</span> <span class="comment"> endfor</span></div><div class="line"><a name="l02279"></a><span class="lineno"> 2279</span> <span class="comment"> endif</span></div><div class="line"><a name="l02280"></a><span class="lineno"> 2280</span> <span class="comment"> </span></div><div class="line"><a name="l02281"></a><span class="lineno"> 2281</span> <span class="comment"> if (result == 0)</span></div><div class="line"><a name="l02282"></a><span class="lineno"> 2282</span> <span class="comment"> nw = numpnts(result_waves)</span></div><div class="line"><a name="l02283"></a><span class="lineno"> 2283</span> <span class="comment"> wavenames = ""</span></div><div class="line"><a name="l02284"></a><span class="lineno"> 2284</span> <span class="comment"> for (iw = 0; iw < nw; iw += 1)</span></div><div class="line"><a name="l02285"></a><span class="lineno"> 2285</span> <span class="comment"> wave data = result_waves[iw]</span></div><div class="line"><a name="l02286"></a><span class="lineno"> 2286</span> <span class="comment"> if (nz == 1)</span></div><div class="line"><a name="l02287"></a><span class="lineno"> 2287</span> <span class="comment"> redimension /n=(-1, 0, 0) data</span></div><div class="line"><a name="l02288"></a><span class="lineno"> 2288</span> <span class="comment"> elseif (nt == 1)</span></div><div class="line"><a name="l02289"></a><span class="lineno"> 2289</span> <span class="comment"> redimension /n=(-1, nz, 0) data</span></div><div class="line"><a name="l02290"></a><span class="lineno"> 2290</span> <span class="comment"> endif</span></div><div class="line"><a name="l02291"></a><span class="lineno"> 2291</span> <span class="comment"> wavenames += nameofwave(data) + ";"</span></div><div class="line"><a name="l02292"></a><span class="lineno"> 2292</span> <span class="comment"> endfor</span></div><div class="line"><a name="l02293"></a><span class="lineno"> 2293</span> <span class="comment"> endif</span></div><div class="line"><a name="l02294"></a><span class="lineno"> 2294</span> <span class="comment"> if (progress)</span></div><div class="line"><a name="l02295"></a><span class="lineno"> 2295</span> <span class="comment"> kill_progress_panel()</span></div><div class="line"><a name="l02296"></a><span class="lineno"> 2296</span> <span class="comment"> endif</span></div><div class="line"><a name="l02297"></a><span class="lineno"> 2297</span> <span class="comment"> </span></div><div class="line"><a name="l02298"></a><span class="lineno"> 2298</span> <span class="comment"> setdatafolder base_df</span></div><div class="line"><a name="l02299"></a><span class="lineno"> 2299</span> <span class="comment"> return wavenames</span></div><div class="line"><a name="l02300"></a><span class="lineno"> 2300</span> <span class="comment">end</span></div><div class="line"><a name="l02301"></a><span class="lineno"> 2301</span> <span class="comment"></span></div><div class="line"><a name="l02302"></a><span class="lineno"><a class="line" href="pearl-pshell-import_8ipf.html#a33f8faf117450af1d6dae9ef48786cd6"> 2302</a></span> <span class="comment">threadsafe static function reduce_slab_worker(reduction_func)</span></div><div class="line"><a name="l02303"></a><span class="lineno"> 2303</span> <span class="comment"> funcref adh5_default_reduction reduction_func</span></div><div class="line"><a name="l02304"></a><span class="lineno"> 2304</span> <span class="comment"> do</span></div><div class="line"><a name="l02305"></a><span class="lineno"> 2305</span> <span class="comment"> // wait for job from main thread</span></div><div class="line"><a name="l02306"></a><span class="lineno"> 2306</span> <span class="comment"> do</span></div><div class="line"><a name="l02307"></a><span class="lineno"> 2307</span> <span class="comment"> dfref dfr = ThreadGroupGetDFR(0, 1000)</span></div><div class="line"><a name="l02308"></a><span class="lineno"> 2308</span> <span class="comment"> if (DataFolderRefStatus(dfr) == 0)</span></div><div class="line"><a name="l02309"></a><span class="lineno"> 2309</span> <span class="comment"> if (GetRTError(2))</span></div><div class="line"><a name="l02310"></a><span class="lineno"> 2310</span> <span class="comment"> return 0 // no more jobs</span></div><div class="line"><a name="l02311"></a><span class="lineno"> 2311</span> <span class="comment"> endif</span></div><div class="line"><a name="l02312"></a><span class="lineno"> 2312</span> <span class="comment"> else</span></div><div class="line"><a name="l02313"></a><span class="lineno"> 2313</span> <span class="comment"> break</span></div><div class="line"><a name="l02314"></a><span class="lineno"> 2314</span> <span class="comment"> endif</span></div><div class="line"><a name="l02315"></a><span class="lineno"> 2315</span> <span class="comment"> while (1)</span></div><div class="line"><a name="l02316"></a><span class="lineno"> 2316</span> <span class="comment"></span></div><div class="line"><a name="l02317"></a><span class="lineno"> 2317</span> <span class="comment"> // get input data</span></div><div class="line"><a name="l02318"></a><span class="lineno"> 2318</span> <span class="comment"> wave slabdata = dfr:slabdata</span></div><div class="line"><a name="l02319"></a><span class="lineno"> 2319</span> <span class="comment"> wave image = dfr:image</span></div><div class="line"><a name="l02320"></a><span class="lineno"> 2320</span> <span class="comment"> svar func_param = dfr:func_param</span></div><div class="line"><a name="l02321"></a><span class="lineno"> 2321</span> <span class="comment"> nvar rr = dfr:r_index</span></div><div class="line"><a name="l02322"></a><span class="lineno"> 2322</span> <span class="comment"> nvar ss = dfr:s_index</span></div><div class="line"><a name="l02323"></a><span class="lineno"> 2323</span> <span class="comment"> </span></div><div class="line"><a name="l02324"></a><span class="lineno"> 2324</span> <span class="comment"> // do the work</span></div><div class="line"><a name="l02325"></a><span class="lineno"> 2325</span> <span class="comment"> newdatafolder /s outDF</span></div><div class="line"><a name="l02326"></a><span class="lineno"> 2326</span> <span class="comment"> variable /g r_index = rr</span></div><div class="line"><a name="l02327"></a><span class="lineno"> 2327</span> <span class="comment"> variable /g s_index = ss</span></div><div class="line"><a name="l02328"></a><span class="lineno"> 2328</span> <span class="comment"> wave /wave reduced_waves = reduce_slab_image(slabdata, image, reduction_func, func_param)</span></div><div class="line"><a name="l02329"></a><span class="lineno"> 2329</span> <span class="comment"> variable /g func_result = numpnts(reduced_waves)</span></div><div class="line"><a name="l02330"></a><span class="lineno"> 2330</span> <span class="comment"></span></div><div class="line"><a name="l02331"></a><span class="lineno"> 2331</span> <span class="comment"> // send output to queue and clean up</span></div><div class="line"><a name="l02332"></a><span class="lineno"> 2332</span> <span class="comment"> adh5_get_result_waves(reduced_waves, "redw_", 0)</span></div><div class="line"><a name="l02333"></a><span class="lineno"> 2333</span> <span class="comment"> WaveClear slabdata, image, reduced_waves</span></div><div class="line"><a name="l02334"></a><span class="lineno"> 2334</span> <span class="comment"> ThreadGroupPutDF 0, :</span></div><div class="line"><a name="l02335"></a><span class="lineno"> 2335</span> <span class="comment"> KillDataFolder dfr</span></div><div class="line"><a name="l02336"></a><span class="lineno"> 2336</span> <span class="comment"> while (1)</span></div><div class="line"><a name="l02337"></a><span class="lineno"> 2337</span> <span class="comment"> </span></div><div class="line"><a name="l02338"></a><span class="lineno"> 2338</span> <span class="comment"> return 0</span></div><div class="line"><a name="l02339"></a><span class="lineno"> 2339</span> <span class="comment">end</span></div><div class="line"><a name="l02340"></a><span class="lineno"> 2340</span> <span class="comment"></span></div><div class="line"><a name="l02341"></a><span class="lineno"><a class="line" href="pearl-pshell-import_8ipf.html#a44d495fba0dd2b82dec13760a07fd226"> 2341</a></span> <span class="comment">threadsafe static function /wave reduce_slab_image(slabdata, image, reduction_func, reduction_param)</span></div><div class="line"><a name="l02342"></a><span class="lineno"> 2342</span> <span class="comment"> wave slabdata</span></div><div class="line"><a name="l02343"></a><span class="lineno"> 2343</span> <span class="comment"> wave image</span></div><div class="line"><a name="l02344"></a><span class="lineno"> 2344</span> <span class="comment"> funcref adh5_default_reduction reduction_func</span></div><div class="line"><a name="l02345"></a><span class="lineno"> 2345</span> <span class="comment"> string reduction_param</span></div><div class="line"><a name="l02346"></a><span class="lineno"> 2346</span> <span class="comment"> </span></div><div class="line"><a name="l02347"></a><span class="lineno"> 2347</span> <span class="comment"> // the multiplication by detector sensitivity assumes that we are loading a ScientaImage.</span></div><div class="line"><a name="l02348"></a><span class="lineno"> 2348</span> <span class="comment"> image = slabdata[q][p][0][0] * kDetectorSensitivity</span></div><div class="line"><a name="l02349"></a><span class="lineno"> 2349</span> <span class="comment"></span></div><div class="line"><a name="l02350"></a><span class="lineno"> 2350</span> <span class="comment"> return reduction_func(image, reduction_param)</span></div><div class="line"><a name="l02351"></a><span class="lineno"> 2351</span> <span class="comment">end</span></div><div class="line"><a name="l02352"></a><span class="lineno"> 2352</span> <span class="comment"></span></div><div class="line"><a name="l02367"></a><span class="lineno"><a class="line" href="pearl-pshell-import_8ipf.html#aa14b28120a07a8213e5a692930704a4b"> 2367</a></span> <span class="comment">function /s psh5_load_info(APathName, AFileName)</span></div><div class="line"><a name="l02368"></a><span class="lineno"> 2368</span> <span class="comment"> string APathName</span></div><div class="line"><a name="l02369"></a><span class="lineno"> 2369</span> <span class="comment"> string AFileName</span></div><div class="line"><a name="l02370"></a><span class="lineno"> 2370</span> <span class="comment"> </span></div><div class="line"><a name="l02371"></a><span class="lineno"> 2371</span> <span class="comment"> dfref saveDF = GetDataFolderDFR()</span></div><div class="line"><a name="l02372"></a><span class="lineno"> 2372</span> <span class="comment"> dfref fileDF = NewFreeDataFolder()</span></div><div class="line"><a name="l02373"></a><span class="lineno"> 2373</span> <span class="comment"> setdatafolder fileDF</span></div><div class="line"><a name="l02374"></a><span class="lineno"> 2374</span> <span class="comment"></span></div><div class="line"><a name="l02375"></a><span class="lineno"> 2375</span> <span class="comment"> variable fileID</span></div><div class="line"><a name="l02376"></a><span class="lineno"> 2376</span> <span class="comment"> string filepath</span></div><div class="line"><a name="l02377"></a><span class="lineno"> 2377</span> <span class="comment"> string scanpaths</span></div><div class="line"><a name="l02378"></a><span class="lineno"> 2378</span> <span class="comment"> variable nscans</span></div><div class="line"><a name="l02379"></a><span class="lineno"> 2379</span> <span class="comment"> variable iscan</span></div><div class="line"><a name="l02380"></a><span class="lineno"> 2380</span> <span class="comment"> string scanpath</span></div><div class="line"><a name="l02381"></a><span class="lineno"> 2381</span> <span class="comment"> string info = ""</span></div><div class="line"><a name="l02382"></a><span class="lineno"> 2382</span> <span class="comment"> </span></div><div class="line"><a name="l02383"></a><span class="lineno"> 2383</span> <span class="comment"> HDF5OpenFile /P=$APathName /R fileID as AFileName</span></div><div class="line"><a name="l02384"></a><span class="lineno"> 2384</span> <span class="comment"> if (v_flag == 0)</span></div><div class="line"><a name="l02385"></a><span class="lineno"> 2385</span> <span class="comment"> filepath = s_path + s_filename</span></div><div class="line"><a name="l02386"></a><span class="lineno"> 2386</span> <span class="comment"> scanpaths = psh5_list_scans(fileID)</span></div><div class="line"><a name="l02387"></a><span class="lineno"> 2387</span> <span class="comment"> nscans = ItemsInList(scanpaths)</span></div><div class="line"><a name="l02388"></a><span class="lineno"> 2388</span> <span class="comment"> for (iscan = 0; iscan < nscans; iscan += 1)</span></div><div class="line"><a name="l02389"></a><span class="lineno"> 2389</span> <span class="comment"> scanpath = StringFromList(iscan, scanpaths)</span></div><div class="line"><a name="l02390"></a><span class="lineno"> 2390</span> <span class="comment"> info = info + scanpath + "\r"</span></div><div class="line"><a name="l02391"></a><span class="lineno"> 2391</span> <span class="comment"> info = info + psh5_load_scan_info(fileID, scanpath)</span></div><div class="line"><a name="l02392"></a><span class="lineno"> 2392</span> <span class="comment"> endfor</span></div><div class="line"><a name="l02393"></a><span class="lineno"> 2393</span> <span class="comment"> HDF5CloseFile fileID</span></div><div class="line"><a name="l02394"></a><span class="lineno"> 2394</span> <span class="comment"> endif</span></div><div class="line"><a name="l02395"></a><span class="lineno"> 2395</span> <span class="comment"> </span></div><div class="line"><a name="l02396"></a><span class="lineno"> 2396</span> <span class="comment"> setdatafolder saveDF</span></div><div class="line"><a name="l02397"></a><span class="lineno"> 2397</span> <span class="comment"> return info</span></div><div class="line"><a name="l02398"></a><span class="lineno"> 2398</span> <span class="comment">end</span></div><div class="line"><a name="l02399"></a><span class="lineno"> 2399</span> <span class="comment"></span></div><div class="line"><a name="l02414"></a><span class="lineno"><a class="line" href="pearl-pshell-import_8ipf.html#a79ac37bb666b42c3332e9984196ccfe7"> 2414</a></span> <span class="comment">function /s psh5_load_scan_info(fileID, scanpath)</span></div><div class="line"><a name="l02415"></a><span class="lineno"> 2415</span> <span class="comment"> variable fileID</span></div><div class="line"><a name="l02416"></a><span class="lineno"> 2416</span> <span class="comment"> string scanpath</span></div><div class="line"><a name="l02417"></a><span class="lineno"> 2417</span> <span class="comment"> </span></div><div class="line"><a name="l02418"></a><span class="lineno"> 2418</span> <span class="comment"> string info = ""</span></div><div class="line"><a name="l02419"></a><span class="lineno"> 2419</span> <span class="comment"> string positions = ""</span></div><div class="line"><a name="l02420"></a><span class="lineno"> 2420</span> <span class="comment"> string positioners = ""</span></div><div class="line"><a name="l02421"></a><span class="lineno"> 2421</span> <span class="comment"> string readables = ""</span></div><div class="line"><a name="l02422"></a><span class="lineno"> 2422</span> <span class="comment"> string detectors = ""</span></div><div class="line"><a name="l02423"></a><span class="lineno"> 2423</span> <span class="comment"> string regions = ""</span></div><div class="line"><a name="l02424"></a><span class="lineno"> 2424</span> <span class="comment"></span></div><div class="line"><a name="l02425"></a><span class="lineno"> 2425</span> <span class="comment"> psh5_load_scan_meta(fileID, scanpath)</span></div><div class="line"><a name="l02426"></a><span class="lineno"> 2426</span> <span class="comment"></span></div><div class="line"><a name="l02427"></a><span class="lineno"> 2427</span> <span class="comment"> wave /z ScanDimensions</span></div><div class="line"><a name="l02428"></a><span class="lineno"> 2428</span> <span class="comment"> wave /t /z ScanWritables</span></div><div class="line"><a name="l02429"></a><span class="lineno"> 2429</span> <span class="comment"> wave /t /z ScanReadables</span></div><div class="line"><a name="l02430"></a><span class="lineno"> 2430</span> <span class="comment"> wave /z ScanSteps</span></div><div class="line"><a name="l02431"></a><span class="lineno"> 2431</span> <span class="comment"></span></div><div class="line"><a name="l02432"></a><span class="lineno"> 2432</span> <span class="comment"> if (WaveExists(ScanSteps) && (numpnts(ScanSteps) >= 1))</span></div><div class="line"><a name="l02433"></a><span class="lineno"> 2433</span> <span class="comment"> ScanSteps += 1</span></div><div class="line"><a name="l02434"></a><span class="lineno"> 2434</span> <span class="comment"> positions = "positions = (" + wave2list(ScanSteps, "%u", ",") + ")"</span></div><div class="line"><a name="l02435"></a><span class="lineno"> 2435</span> <span class="comment"> info = AddListItem(positions, info, "\r", inf)</span></div><div class="line"><a name="l02436"></a><span class="lineno"> 2436</span> <span class="comment"> endif</span></div><div class="line"><a name="l02437"></a><span class="lineno"> 2437</span> <span class="comment"> if (WaveExists(ScanWritables) && (numpnts(ScanWritables) >= 1))</span></div><div class="line"><a name="l02438"></a><span class="lineno"> 2438</span> <span class="comment"> positioners = "positioners = " + twave2list(ScanWritables, ",")</span></div><div class="line"><a name="l02439"></a><span class="lineno"> 2439</span> <span class="comment"> info = AddListItem(positioners, info, "\r", inf)</span></div><div class="line"><a name="l02440"></a><span class="lineno"> 2440</span> <span class="comment"> endif</span></div><div class="line"><a name="l02441"></a><span class="lineno"> 2441</span> <span class="comment"></span></div><div class="line"><a name="l02442"></a><span class="lineno"> 2442</span> <span class="comment"> variable i, m, n</span></div><div class="line"><a name="l02443"></a><span class="lineno"> 2443</span> <span class="comment"> string s</span></div><div class="line"><a name="l02444"></a><span class="lineno"> 2444</span> <span class="comment"> if (WaveExists(ScanReadables) && (numpnts(ScanReadables) >= 1))</span></div><div class="line"><a name="l02445"></a><span class="lineno"> 2445</span> <span class="comment"> readables = twave2list(ScanReadables, ",")</span></div><div class="line"><a name="l02446"></a><span class="lineno"> 2446</span> <span class="comment"> n = ItemsInList(readables, ",")</span></div><div class="line"><a name="l02447"></a><span class="lineno"> 2447</span> <span class="comment"> for (i = 0; i < n; i += 1)</span></div><div class="line"><a name="l02448"></a><span class="lineno"> 2448</span> <span class="comment"> s = StringFromList(i, readables, ",")</span></div><div class="line"><a name="l02449"></a><span class="lineno"> 2449</span> <span class="comment"> m = ItemsInList(s, "/")</span></div><div class="line"><a name="l02450"></a><span class="lineno"> 2450</span> <span class="comment"> if (m > 1)</span></div><div class="line"><a name="l02451"></a><span class="lineno"> 2451</span> <span class="comment"> s = StringFromList(m - 1, s, "/")</span></div><div class="line"><a name="l02452"></a><span class="lineno"> 2452</span> <span class="comment"> endif</span></div><div class="line"><a name="l02453"></a><span class="lineno"> 2453</span> <span class="comment"> if (WhichListItem(s, detectors, ",") < 0)</span></div><div class="line"><a name="l02454"></a><span class="lineno"> 2454</span> <span class="comment"> detectors = AddListItem(s, detectors, ",", inf)</span></div><div class="line"><a name="l02455"></a><span class="lineno"> 2455</span> <span class="comment"> endif</span></div><div class="line"><a name="l02456"></a><span class="lineno"> 2456</span> <span class="comment"> endfor</span></div><div class="line"><a name="l02457"></a><span class="lineno"> 2457</span> <span class="comment"> detectors = "detectors = " + detectors</span></div><div class="line"><a name="l02458"></a><span class="lineno"> 2458</span> <span class="comment"> info = AddListItem(detectors, info, "\r", inf)</span></div><div class="line"><a name="l02459"></a><span class="lineno"> 2459</span> <span class="comment"> endif</span></div><div class="line"><a name="l02460"></a><span class="lineno"> 2460</span> <span class="comment"></span></div><div class="line"><a name="l02461"></a><span class="lineno"> 2461</span> <span class="comment"> regions = psh5_list_scan_regions(fileID, scanpath)</span></div><div class="line"><a name="l02462"></a><span class="lineno"> 2462</span> <span class="comment"> if (strlen(regions) > 0)</span></div><div class="line"><a name="l02463"></a><span class="lineno"> 2463</span> <span class="comment"> regions = "regions = " + regions</span></div><div class="line"><a name="l02464"></a><span class="lineno"> 2464</span> <span class="comment"> info = AddListItem(regions, info, "\r", inf)</span></div><div class="line"><a name="l02465"></a><span class="lineno"> 2465</span> <span class="comment"> endif</span></div><div class="line"><a name="l02466"></a><span class="lineno"> 2466</span> <span class="comment"> </span></div><div class="line"><a name="l02467"></a><span class="lineno"> 2467</span> <span class="comment"> return info</span></div><div class="line"><a name="l02468"></a><span class="lineno"> 2468</span> <span class="comment">end</span></div><div class="line"><a name="l02469"></a><span class="lineno"> 2469</span> <span class="comment"></span></div><div class="line"><a name="l02473"></a><span class="lineno"><a class="line" href="pearl-pshell-import_8ipf.html#a92a18d6e81c3f521ba3bb240eaf578a9"> 2473</a></span> <span class="comment">static function /s twave2list(wt, sep)</span></div><div class="line"><a name="l02474"></a><span class="lineno"> 2474</span> <span class="comment"> wave /t wt</span></div><div class="line"><a name="l02475"></a><span class="lineno"> 2475</span> <span class="comment"> string sep</span></div><div class="line"><a name="l02476"></a><span class="lineno"> 2476</span> <span class="comment"> </span></div><div class="line"><a name="l02477"></a><span class="lineno"> 2477</span> <span class="comment"> string list = ""</span></div><div class="line"><a name="l02478"></a><span class="lineno"> 2478</span> <span class="comment"> variable n = numpnts(wt)</span></div><div class="line"><a name="l02479"></a><span class="lineno"> 2479</span> <span class="comment"> variable i</span></div><div class="line"><a name="l02480"></a><span class="lineno"> 2480</span> <span class="comment"> for (i = 0; i < n; i += 1)</span></div><div class="line"><a name="l02481"></a><span class="lineno"> 2481</span> <span class="comment"> list = AddListItem(wt[i], list, sep, inf)</span></div><div class="line"><a name="l02482"></a><span class="lineno"> 2482</span> <span class="comment"> endfor</span></div><div class="line"><a name="l02483"></a><span class="lineno"> 2483</span> <span class="comment"> </span></div><div class="line"><a name="l02484"></a><span class="lineno"> 2484</span> <span class="comment"> return list</span></div><div class="line"><a name="l02485"></a><span class="lineno"> 2485</span> <span class="comment">end</span></div><div class="line"><a name="l02486"></a><span class="lineno"> 2486</span> <span class="comment"></span></div><div class="line"><a name="l02490"></a><span class="lineno"><a class="line" href="pearl-pshell-import_8ipf.html#aa6dc3e3f7dc1ca4346132635a90fc447"> 2490</a></span> <span class="comment">static function /s wave2list(w, format, sep)</span></div><div class="line"><a name="l02491"></a><span class="lineno"> 2491</span> <span class="comment"> wave w</span></div><div class="line"><a name="l02492"></a><span class="lineno"> 2492</span> <span class="comment"> string format</span></div><div class="line"><a name="l02493"></a><span class="lineno"> 2493</span> <span class="comment"> string sep</span></div><div class="line"><a name="l02494"></a><span class="lineno"> 2494</span> <span class="comment"> </span></div><div class="line"><a name="l02495"></a><span class="lineno"> 2495</span> <span class="comment"> string list = ""</span></div><div class="line"><a name="l02496"></a><span class="lineno"> 2496</span> <span class="comment"> variable n = numpnts(w)</span></div><div class="line"><a name="l02497"></a><span class="lineno"> 2497</span> <span class="comment"> variable i</span></div><div class="line"><a name="l02498"></a><span class="lineno"> 2498</span> <span class="comment"> string s</span></div><div class="line"><a name="l02499"></a><span class="lineno"> 2499</span> <span class="comment"> for (i = 0; i < n; i += 1)</span></div><div class="line"><a name="l02500"></a><span class="lineno"> 2500</span> <span class="comment"> sprintf s, format, w[i]</span></div><div class="line"><a name="l02501"></a><span class="lineno"> 2501</span> <span class="comment"> list = AddListItem(s, list, sep, inf)</span></div><div class="line"><a name="l02502"></a><span class="lineno"> 2502</span> <span class="comment"> endfor</span></div><div class="line"><a name="l02503"></a><span class="lineno"> 2503</span> <span class="comment"> </span></div><div class="line"><a name="l02504"></a><span class="lineno"> 2504</span> <span class="comment"> return list</span></div><div class="line"><a name="l02505"></a><span class="lineno"> 2505</span> <span class="comment">end</span></div><div class="ttc" id="pearl-pshell-import_8ipf_html_a5ad52cb10171572c454f9426d3a9be21"><div class="ttname"><a href="pearl-pshell-import_8ipf.html#a5ad52cb10171572c454f9426d3a9be21">kEnergyDimLabel</a></div><div class="ttdeci">const string kEnergyDimLabel</div><div class="ttdoc">Dimension label for the energy dispersive dimension of multi-dimensional datasets. </div><div class="ttdef"><b>Definition:</b> <a href="pearl-pshell-import_8ipf_source.html#l00065">pearl-pshell-import.ipf:65</a></div></div>
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<div class="ttc" id="pearl-pshell-import_8ipf_html_ad3b9354b137ba4f1bc3ed2e74f24dc88"><div class="ttname"><a href="pearl-pshell-import_8ipf.html#ad3b9354b137ba4f1bc3ed2e74f24dc88">psh5_load_scan_preview</a></div><div class="ttdeci">string psh5_load_scan_preview(variable fileID, string scanpath, variable set_scale=defaultValue, string pref_datasets=defaultValue)</div><div class="ttdoc">load a preview dataset from an open PShell HDF5 file. </div><div class="ttdef"><b>Definition:</b> <a href="pearl-pshell-import_8ipf_source.html#l00840">pearl-pshell-import.ipf:840</a></div></div>
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<div class="ttc" id="pearl-pshell-import_8ipf_html_aec191d0167bbf606d24396f4658104b5"><div class="ttname"><a href="pearl-pshell-import_8ipf.html#aec191d0167bbf606d24396f4658104b5">psh5_load_scan_attrs</a></div><div class="ttdeci">string psh5_load_scan_attrs(variable fileID, string scanpath, variable attr_sets=defaultValue)</div><div class="ttdoc">load attributes of a PShell scan group. </div><div class="ttdef"><b>Definition:</b> <a href="pearl-pshell-import_8ipf_source.html#l00554">pearl-pshell-import.ipf:554</a></div></div>
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<div class="ttc" id="pearl-pshell-import_8ipf_html_a0f2c168c04d075734edb995361aefb82"><div class="ttname"><a href="pearl-pshell-import_8ipf.html#a0f2c168c04d075734edb995361aefb82">kTransposedDatasets</a></div><div class="ttdeci">const string kTransposedDatasets</div><div class="ttdoc">List of datasets that should be transposed upon loading. </div><div class="ttdef"><b>Definition:</b> <a href="pearl-pshell-import_8ipf_source.html#l00084">pearl-pshell-import.ipf:84</a></div></div>
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<div class="ttc" id="pearl-pshell-import_8ipf_html_a0a02f87e19e825964aa17c46ed51df8c"><div class="ttname"><a href="pearl-pshell-import_8ipf.html#a0a02f87e19e825964aa17c46ed51df8c">psh5_load_scan_complete</a></div><div class="ttdeci">string psh5_load_scan_complete(variable fileID, string scanpath, variable load_data=defaultValue, variable load_attr=defaultValue)</div><div class="ttdoc">load all data of a selected scan from a PShell data file. </div><div class="ttdef"><b>Definition:</b> <a href="pearl-pshell-import_8ipf_source.html#l00361">pearl-pshell-import.ipf:361</a></div></div>
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<div class="ttc" id="pearl-pshell-import_8ipf_html_a412b4753ceb753d705a113a26c018b22"><div class="ttname"><a href="pearl-pshell-import_8ipf.html#a412b4753ceb753d705a113a26c018b22">kScanDimLabel</a></div><div class="ttdeci">const string kScanDimLabel</div><div class="ttdoc">Dimension label for the scan dimension of multi-dimensional datasets. </div><div class="ttdef"><b>Definition:</b> <a href="pearl-pshell-import_8ipf_source.html#l00071">pearl-pshell-import.ipf:71</a></div></div>
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<div class="ttc" id="pearl-compat_8ipf_html_aa1f59acc532c7eee75c83b70ee1feaa9"><div class="ttname"><a href="pearl-compat_8ipf.html#aa1f59acc532c7eee75c83b70ee1feaa9">PearlCleanupName</a></div><div class="ttdeci">string PearlCleanupName(string name)</div><div class="ttdef"><b>Definition:</b> <a href="pearl-compat_8ipf_source.html#l00047">pearl-compat.ipf:47</a></div></div>
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<div class="ttc" id="pearl-pshell-import_8ipf_html_a83930d4384b0238fc8416ba03dbc0386"><div class="ttname"><a href="pearl-pshell-import_8ipf.html#a83930d4384b0238fc8416ba03dbc0386">kAngleDimLabel</a></div><div class="ttdeci">const string kAngleDimLabel</div><div class="ttdoc">Dimension label for the angle dispersive dimension of multi-dimensional datasets. ...</div><div class="ttdef"><b>Definition:</b> <a href="pearl-pshell-import_8ipf_source.html#l00068">pearl-pshell-import.ipf:68</a></div></div>
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<div class="ttc" id="pearl-pshell-import_8ipf_html_a277cd450cca7832aa44f8097934e6acb"><div class="ttname"><a href="pearl-pshell-import_8ipf.html#a277cd450cca7832aa44f8097934e6acb">kDataDimLabel</a></div><div class="ttdeci">const string kDataDimLabel</div><div class="ttdoc">Dimension label for the data dimension. </div><div class="ttdef"><b>Definition:</b> <a href="pearl-pshell-import_8ipf_source.html#l00075">pearl-pshell-import.ipf:75</a></div></div>
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<div class="ttc" id="pearl-pshell-import_8ipf_html_a1dc6c971120749b378014f1f63cb6668"><div class="ttname"><a href="pearl-pshell-import_8ipf.html#a1dc6c971120749b378014f1f63cb6668">psh5_load_preview</a></div><div class="ttdeci">string psh5_load_preview(string APathName, string AFileName, variable load_data=defaultValue, variable load_attr=defaultValue, string pref_scans=defaultValue, string pref_datasets=defaultValue)</div><div class="ttdoc">load a preview image from a PShell data file. </div><div class="ttdef"><b>Definition:</b> <a href="pearl-pshell-import_8ipf_source.html#l00251">pearl-pshell-import.ipf:251</a></div></div>
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<div class="ttc" id="pearl-pshell-import_8ipf_html_accc20b0fc6bda95ba0cd0aea6633086f"><div class="ttname"><a href="pearl-pshell-import_8ipf.html#accc20b0fc6bda95ba0cd0aea6633086f">psh5_open_file</a></div><div class="ttdeci">variable psh5_open_file(string ANickName, string APathName, string AFileName)</div><div class="ttdoc">open a HDF5 file created by the PShell data acquisition program and prepare the data folder...</div><div class="ttdef"><b>Definition:</b> <a href="pearl-pshell-import_8ipf_source.html#l00110">pearl-pshell-import.ipf:110</a></div></div>
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<div class="ttc" id="pearl-pshell-import_8ipf_html_af08a467036c64f70ca3dfe644fcc457c"><div class="ttname"><a href="pearl-pshell-import_8ipf.html#af08a467036c64f70ca3dfe644fcc457c">ps_scale_datasets</a></div><div class="ttdeci">variable ps_scale_datasets()</div><div class="ttdoc">set the dimension scales of loaded PShell Scienta datasets according to attributes. </div><div class="ttdef"><b>Definition:</b> <a href="pearl-pshell-import_8ipf_source.html#l01504">pearl-pshell-import.ipf:1504</a></div></div>
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<div class="ttc" id="pearl-pshell-import_8ipf_html_aa56c25d64b3e59f74d6dd92a599cce4f"><div class="ttname"><a href="pearl-pshell-import_8ipf.html#aa56c25d64b3e59f74d6dd92a599cce4f">psh5_load_scan_meta</a></div><div class="ttdeci">string psh5_load_scan_meta(variable fileID, string scanpath)</div><div class="ttdoc">load metadata of a PShell scan group. </div><div class="ttdef"><b>Definition:</b> <a href="pearl-pshell-import_8ipf_source.html#l00625">pearl-pshell-import.ipf:625</a></div></div>
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<div class="ttc" id="pearl-pshell-import_8ipf_html_a03f00b3299bc3df671fcc239f7dd5418"><div class="ttname"><a href="pearl-pshell-import_8ipf.html#a03f00b3299bc3df671fcc239f7dd5418">kScientaScalingDatasets</a></div><div class="ttdeci">const string kScientaScalingDatasets</div><div class="ttdoc">List of datasets that must be loaded to determine the axis scaling of a Scienta image. </div><div class="ttdef"><b>Definition:</b> <a href="pearl-pshell-import_8ipf_source.html#l00081">pearl-pshell-import.ipf:81</a></div></div>
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<div class="ttc" id="pearl-pshell-import_8ipf_html_a4508bd507c4c935bd8463d9b2b84c6fc"><div class="ttname"><a href="pearl-pshell-import_8ipf.html#a4508bd507c4c935bd8463d9b2b84c6fc">psh5_list_scan_datasets</a></div><div class="ttdeci">string psh5_list_scan_datasets(variable fileID, string scanpath, variable include_regions=defaultValue)</div><div class="ttdoc">list datasets of a PShell scan group. </div><div class="ttdef"><b>Definition:</b> <a href="pearl-pshell-import_8ipf_source.html#l00440">pearl-pshell-import.ipf:440</a></div></div>
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<div class="ttc" id="pearl-pshell-import_8ipf_html_ad26b0b56d7ccd23547535091c9430569"><div class="ttname"><a href="pearl-pshell-import_8ipf.html#ad26b0b56d7ccd23547535091c9430569">psh5_load_scan_data</a></div><div class="ttdeci">string psh5_load_scan_data(variable fileID, string scanpath)</div><div class="ttdoc">load all datasets of a PShell scan group. </div><div class="ttdef"><b>Definition:</b> <a href="pearl-pshell-import_8ipf_source.html#l00514">pearl-pshell-import.ipf:514</a></div></div>
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<div class="ttc" id="pearl-pshell-import_8ipf_html_a5745428740b64cd66394a7fcd78b86f1"><div class="ttname"><a href="pearl-pshell-import_8ipf.html#a5745428740b64cd66394a7fcd78b86f1">kDetectorSensitivity</a></div><div class="ttdeci">const variable kDetectorSensitivity</div><div class="ttdoc">multiply scienta detector intensity by this value to get actual counts. </div><div class="ttdef"><b>Definition:</b> <a href="pearl-pshell-import_8ipf_source.html#l00087">pearl-pshell-import.ipf:87</a></div></div>
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<div class="ttc" id="pearl-pshell-import_8ipf_html_a8a5ce6c2767607de194b4c148ee98c27"><div class="ttname"><a href="pearl-pshell-import_8ipf.html#a8a5ce6c2767607de194b4c148ee98c27">psh5_load_complete</a></div><div class="ttdeci">string psh5_load_complete(string ANickName, string APathName, string AFileName, variable load_data=defaultValue, variable load_attr=defaultValue)</div><div class="ttdoc">load everything from a PShell data file. </div><div class="ttdef"><b>Definition:</b> <a href="pearl-pshell-import_8ipf_source.html#l00170">pearl-pshell-import.ipf:170</a></div></div>
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<div class="ttc" id="pearl-pshell-import_8ipf_html_a2152f7c39a187b740cf9890767ffac3f"><div class="ttname"><a href="pearl-pshell-import_8ipf.html#a2152f7c39a187b740cf9890767ffac3f">psh5_list_scans</a></div><div class="ttdeci">string psh5_list_scans(variable fileID)</div><div class="ttdoc">list scan groups of a PShell data file. </div><div class="ttdef"><b>Definition:</b> <a href="pearl-pshell-import_8ipf_source.html#l00405">pearl-pshell-import.ipf:405</a></div></div>
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<div class="ttc" id="pearl-pshell-import_8ipf_html_a2fc497747287d6fe40c6de997ed4a90d"><div class="ttname"><a href="pearl-pshell-import_8ipf.html#a2fc497747287d6fe40c6de997ed4a90d">psh5_close_file</a></div><div class="ttdeci">variable psh5_close_file(variable fileID)</div><div class="ttdoc">close a HDF5 file opened by psh5_open_file. </div><div class="ttdef"><b>Definition:</b> <a href="pearl-pshell-import_8ipf_source.html#l00140">pearl-pshell-import.ipf:140</a></div></div>
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<div class="ttc" id="pearl-pshell-import_8ipf_html_a3c72087695969f42ea91c000de47b26e"><div class="ttname"><a href="pearl-pshell-import_8ipf.html#a3c72087695969f42ea91c000de47b26e">kPreviewDatasets</a></div><div class="ttdeci">const string kPreviewDatasets</div><div class="ttdoc">List of preferred datasets to load for preview. </div><div class="ttdef"><b>Definition:</b> <a href="pearl-pshell-import_8ipf_source.html#l00078">pearl-pshell-import.ipf:78</a></div></div>
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