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make documentation for version 2.0.3

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2019-02-28 18:57:56 +01:00
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@@ -29,7 +29,7 @@
<tr style="height: 56px;">
<td id="projectalign" style="padding-left: 0.5em;">
<div id="projectname">PEARL Procedures
&#160;<span id="projectnumber">rev-distro-2.0.2-0-g3235d52</span>
&#160;<span id="projectnumber">rev-distro-2.0.3-0-g0fb0fd9</span>
</div>
<div id="projectbrief">Igor procedures for the analysis of PEARL data</div>
</td>
@@ -81,19 +81,418 @@ $(document).ready(function(){initNavTree('fermi-edge-analysis_8ipf.html','');});
</div>
<div class="header">
<div class="summary">
<a href="#func-members">Functions</a> &#124;
<a href="#var-members">Variables</a> </div>
<div class="headertitle">
<div class="title">fermi-edge-analysis.ipf File Reference</div> </div>
<div class="title">fermi-edge-analysis.ipf File Reference<div class="ingroups"><a class="el" href="group___arpes_package.html">ARPES package</a></div></div> </div>
</div><!--header-->
<div class="contents">
<p>tools for analysing the Fermi edge measured by the Scienta EW4000 analyser.
<a href="#details">More...</a></p>
<div class="textblock"><code>#include &quot;pearl-area-profiles&quot;</code><br />
</div>
<p><a href="fermi-edge-analysis_8ipf_source.html">Go to the source code of this file.</a></p>
<table class="memberdecls">
<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="func-members"></a>
Functions</h2></td></tr>
<tr class="memitem:a1c4a805435a1d43c2b6dfb6deb633894"><td class="memItemLeft" align="right" valign="top">variable&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="fermi-edge-analysis_8ipf.html#a1c4a805435a1d43c2b6dfb6deb633894">analyse_curved_edge</a> (wave data)</td></tr>
<tr class="separator:a1c4a805435a1d43c2b6dfb6deb633894"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:aac6bac1ee0582caa0676bdc9c2d254f0"><td class="memItemLeft" align="right" valign="top">variable&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="fermi-edge-analysis_8ipf.html#aac6bac1ee0582caa0676bdc9c2d254f0">record_results</a> (variable index)</td></tr>
<tr class="separator:aac6bac1ee0582caa0676bdc9c2d254f0"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:a2a1d7b49c1f88f29ee6d49f6a6f4fbf8"><td class="memItemLeft" align="right" valign="top">variable&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="fermi-edge-analysis_8ipf.html#a2a1d7b49c1f88f29ee6d49f6a6f4fbf8">integrate_curved_edge</a> (wave data, wave data_sig)</td></tr>
<tr class="separator:a2a1d7b49c1f88f29ee6d49f6a6f4fbf8"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:a4cec596c8fd2b21953cb45d6d347211d"><td class="memItemLeft" align="right" valign="top">variable&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="fermi-edge-analysis_8ipf.html#a4cec596c8fd2b21953cb45d6d347211d">slit_correction</a> (wave data, wave data_out, variable epass)</td></tr>
<tr class="separator:a4cec596c8fd2b21953cb45d6d347211d"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:a520d8de9fbc4276c19fb417861f05b0d"><td class="memItemLeft" align="right" valign="top">threadsafe variable&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="fermi-edge-analysis_8ipf.html#a520d8de9fbc4276c19fb417861f05b0d">FermiFuncLinDOS2D_corr</a> (variable w, threadsafe x, wave y)</td></tr>
<tr class="separator:a520d8de9fbc4276c19fb417861f05b0d"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:a27f000c3a3ea74c49db31716be3396d4"><td class="memItemLeft" align="right" valign="top">threadsafe variable&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="fermi-edge-analysis_8ipf.html#a27f000c3a3ea74c49db31716be3396d4">slit_shift</a> (variable ypix, variable epass)</td></tr>
<tr class="separator:a27f000c3a3ea74c49db31716be3396d4"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:acf72d644b8d37b6c26b1e070edba4e30"><td class="memItemLeft" align="right" valign="top">variable&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="fermi-edge-analysis_8ipf.html#acf72d644b8d37b6c26b1e070edba4e30">show_shift</a> (wave data)</td></tr>
<tr class="separator:acf72d644b8d37b6c26b1e070edba4e30"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:ad23de34bb698589e2576ce2836b89d55"><td class="memItemLeft" align="right" valign="top">variable&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="fermi-edge-analysis_8ipf.html#ad23de34bb698589e2576ce2836b89d55">analyser_energy_resolution</a> (variable epass, variable slit)</td></tr>
<tr class="memdesc:ad23de34bb698589e2576ce2836b89d55"><td class="mdescLeft">&#160;</td><td class="mdescRight">calculate the energy resolution of the analyser <a href="#ad23de34bb698589e2576ce2836b89d55">More...</a><br /></td></tr>
<tr class="separator:ad23de34bb698589e2576ce2836b89d55"><td class="memSeparator" colspan="2">&#160;</td></tr>
</table><table class="memberdecls">
<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="var-members"></a>
Variables</h2></td></tr>
<tr class="memitem:a09f26b0a0fd940a3d8c6f92aa769c8bc"><td class="memItemLeft" align="right" valign="top">static const variable&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="fermi-edge-analysis_8ipf.html#a09f26b0a0fd940a3d8c6f92aa769c8bc">mcp_radius_pix</a> = 555</td></tr>
<tr class="memdesc:a09f26b0a0fd940a3d8c6f92aa769c8bc"><td class="mdescLeft">&#160;</td><td class="mdescRight">MCP radius seen by the camera in pixels. <a href="#a09f26b0a0fd940a3d8c6f92aa769c8bc">More...</a><br /></td></tr>
<tr class="separator:a09f26b0a0fd940a3d8c6f92aa769c8bc"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:a4dcc00b93822f1663be2908b10d2ad3e"><td class="memItemLeft" align="right" valign="top">static const variable&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="fermi-edge-analysis_8ipf.html#a4dcc00b93822f1663be2908b10d2ad3e">mcp_radius_mm</a> = 20</td></tr>
<tr class="memdesc:a4dcc00b93822f1663be2908b10d2ad3e"><td class="mdescLeft">&#160;</td><td class="mdescRight">physical size (radius) of the MCP in mm <a href="#a4dcc00b93822f1663be2908b10d2ad3e">More...</a><br /></td></tr>
<tr class="separator:a4dcc00b93822f1663be2908b10d2ad3e"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:a0cb8da36beae05c79fe5b1da918d3897"><td class="memItemLeft" align="right" valign="top">static const variable&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="fermi-edge-analysis_8ipf.html#a0cb8da36beae05c79fe5b1da918d3897">hemi_radius_mm</a> = 200</td></tr>
<tr class="memdesc:a0cb8da36beae05c79fe5b1da918d3897"><td class="mdescLeft">&#160;</td><td class="mdescRight">physical size (radius) of the hemisphere in mm <a href="#a0cb8da36beae05c79fe5b1da918d3897">More...</a><br /></td></tr>
<tr class="separator:a0cb8da36beae05c79fe5b1da918d3897"><td class="memSeparator" colspan="2">&#160;</td></tr>
<tr class="memitem:a4749b9bce3e1d0381bd9daeb97c9754c"><td class="memItemLeft" align="right" valign="top">static const variable&#160;</td><td class="memItemRight" valign="bottom"><a class="el" href="fermi-edge-analysis_8ipf.html#a4749b9bce3e1d0381bd9daeb97c9754c">mcp_radius_epass</a> = 0.04</td></tr>
<tr class="memdesc:a4749b9bce3e1d0381bd9daeb97c9754c"><td class="mdescLeft">&#160;</td><td class="mdescRight">energy range imaged on MCP relative to the pass energy <a href="#a4749b9bce3e1d0381bd9daeb97c9754c">More...</a><br /></td></tr>
<tr class="separator:a4749b9bce3e1d0381bd9daeb97c9754c"><td class="memSeparator" colspan="2">&#160;</td></tr>
</table>
<a name="details" id="details"></a><h2 class="groupheader">Detailed Description</h2>
<div class="textblock"><p>tools for analysing the Fermi edge measured by the Scienta EW4000 analyser. </p>
<p>proposed procedure</p>
<ul>
<li>angular normalization</li>
<li>fit curved fermi function</li>
<li>calculate corrected energy coordinates and map to single independent variable</li>
<li>fit normal fermi function</li>
</ul>
<dl class="section author"><dt>Author</dt><dd>matthias muntwiler, <a href="#" onclick="location.href='mai'+'lto:'+'mat'+'th'+'ias'+'.m'+'unt'+'wi'+'ler'+'@p'+'si.'+'ch'; return false;">matth<span style="display: none;">.nosp@m.</span>ias.<span style="display: none;">.nosp@m.</span>muntw<span style="display: none;">.nosp@m.</span>iler<span style="display: none;">.nosp@m.</span>@psi.<span style="display: none;">.nosp@m.</span>ch</a> </dd>
<dd>
thomas dienel</dd></dl>
<dl class="section copyright"><dt>Copyright</dt><dd>2013-15 Paul Scherrer Institut <br />
Licensed under the Apache License, Version 2.0 (the "License"); <br />
you may not use this file except in compliance with the License. <br />
You may obtain a copy of the License at <a href="http://www.apache.org/licenses/LICENSE-2.0">http://www.apache.org/licenses/LICENSE-2.0</a> </dd></dl>
<p class="definition">Definition in file <a class="el" href="fermi-edge-analysis_8ipf_source.html">fermi-edge-analysis.ipf</a>.</p>
</div><h2 class="groupheader">Function Documentation</h2>
<a id="a1c4a805435a1d43c2b6dfb6deb633894"></a>
<h2 class="memtitle"><span class="permalink"><a href="#a1c4a805435a1d43c2b6dfb6deb633894">&#9670;&nbsp;</a></span>analyse_curved_edge()</h2>
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<td class="memname">variable analyse_curved_edge </td>
<td>(</td>
<td class="paramtype">wave&#160;</td>
<td class="paramname"><em>data</em></td><td>)</td>
<td></td>
</tr>
</table>
</div><div class="memdoc">
<p class="definition">Definition at line <a class="el" href="fermi-edge-analysis_8ipf_source.html#l00027">27</a> of file <a class="el" href="fermi-edge-analysis_8ipf_source.html">fermi-edge-analysis.ipf</a>.</p>
</div>
</div>
<a id="ad23de34bb698589e2576ce2836b89d55"></a>
<h2 class="memtitle"><span class="permalink"><a href="#ad23de34bb698589e2576ce2836b89d55">&#9670;&nbsp;</a></span>analyser_energy_resolution()</h2>
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<td class="memname">variable analyser_energy_resolution </td>
<td>(</td>
<td class="paramtype">variable&#160;</td>
<td class="paramname"><em>epass</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">variable&#160;</td>
<td class="paramname"><em>slit</em>&#160;</td>
</tr>
<tr>
<td></td>
<td>)</td>
<td></td><td></td>
</tr>
</table>
</div><div class="memdoc">
<p>calculate the energy resolution of the analyser </p>
<dl class="params"><dt>Parameters</dt><dd>
<table class="params">
<tr><td class="paramname">epass</td><td>pass energy in eV </td></tr>
<tr><td class="paramname">slit</td><td>analyser entrance slit in mm</td></tr>
</table>
</dd>
</dl>
<dl class="section return"><dt>Returns</dt><dd>energy resolution (FWHM) </dd></dl>
<p class="definition">Definition at line <a class="el" href="fermi-edge-analysis_8ipf_source.html#l00306">306</a> of file <a class="el" href="fermi-edge-analysis_8ipf_source.html">fermi-edge-analysis.ipf</a>.</p>
</div>
</div>
<a id="a520d8de9fbc4276c19fb417861f05b0d"></a>
<h2 class="memtitle"><span class="permalink"><a href="#a520d8de9fbc4276c19fb417861f05b0d">&#9670;&nbsp;</a></span>FermiFuncLinDOS2D_corr()</h2>
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<div class="memproto">
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<td class="memname">threadsafe variable FermiFuncLinDOS2D_corr </td>
<td>(</td>
<td class="paramtype">variable&#160;</td>
<td class="paramname"><em>w</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">threadsafe&#160;</td>
<td class="paramname"><em>x</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">wave&#160;</td>
<td class="paramname"><em>y</em>&#160;</td>
</tr>
<tr>
<td></td>
<td>)</td>
<td></td><td></td>
</tr>
</table>
</div><div class="memdoc">
<p class="definition">Definition at line <a class="el" href="fermi-edge-analysis_8ipf_source.html#l00216">216</a> of file <a class="el" href="fermi-edge-analysis_8ipf_source.html">fermi-edge-analysis.ipf</a>.</p>
</div>
</div>
<a id="a2a1d7b49c1f88f29ee6d49f6a6f4fbf8"></a>
<h2 class="memtitle"><span class="permalink"><a href="#a2a1d7b49c1f88f29ee6d49f6a6f4fbf8">&#9670;&nbsp;</a></span>integrate_curved_edge()</h2>
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<td class="memname">variable integrate_curved_edge </td>
<td>(</td>
<td class="paramtype">wave&#160;</td>
<td class="paramname"><em>data</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">wave&#160;</td>
<td class="paramname"><em>data_sig</em>&#160;</td>
</tr>
<tr>
<td></td>
<td>)</td>
<td></td><td></td>
</tr>
</table>
</div><div class="memdoc">
<p class="definition">Definition at line <a class="el" href="fermi-edge-analysis_8ipf_source.html#l00116">116</a> of file <a class="el" href="fermi-edge-analysis_8ipf_source.html">fermi-edge-analysis.ipf</a>.</p>
</div>
</div>
<a id="aac6bac1ee0582caa0676bdc9c2d254f0"></a>
<h2 class="memtitle"><span class="permalink"><a href="#aac6bac1ee0582caa0676bdc9c2d254f0">&#9670;&nbsp;</a></span>record_results()</h2>
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<td class="memname">variable record_results </td>
<td>(</td>
<td class="paramtype">variable&#160;</td>
<td class="paramname"><em>index</em></td><td>)</td>
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<p class="definition">Definition at line <a class="el" href="fermi-edge-analysis_8ipf_source.html#l00098">98</a> of file <a class="el" href="fermi-edge-analysis_8ipf_source.html">fermi-edge-analysis.ipf</a>.</p>
</div>
</div>
<a id="acf72d644b8d37b6c26b1e070edba4e30"></a>
<h2 class="memtitle"><span class="permalink"><a href="#acf72d644b8d37b6c26b1e070edba4e30">&#9670;&nbsp;</a></span>show_shift()</h2>
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<td class="memname">variable show_shift </td>
<td>(</td>
<td class="paramtype">wave&#160;</td>
<td class="paramname"><em>data</em></td><td>)</td>
<td></td>
</tr>
</table>
</div><div class="memdoc">
<p class="definition">Definition at line <a class="el" href="fermi-edge-analysis_8ipf_source.html#l00284">284</a> of file <a class="el" href="fermi-edge-analysis_8ipf_source.html">fermi-edge-analysis.ipf</a>.</p>
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<h2 class="memtitle"><span class="permalink"><a href="#a4cec596c8fd2b21953cb45d6d347211d">&#9670;&nbsp;</a></span>slit_correction()</h2>
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<td class="memname">variable slit_correction </td>
<td>(</td>
<td class="paramtype">wave&#160;</td>
<td class="paramname"><em>data</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">wave&#160;</td>
<td class="paramname"><em>data_out</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">variable&#160;</td>
<td class="paramname"><em>epass</em>&#160;</td>
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<tr>
<td></td>
<td>)</td>
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<p class="definition">Definition at line <a class="el" href="fermi-edge-analysis_8ipf_source.html#l00173">173</a> of file <a class="el" href="fermi-edge-analysis_8ipf_source.html">fermi-edge-analysis.ipf</a>.</p>
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<a id="a27f000c3a3ea74c49db31716be3396d4"></a>
<h2 class="memtitle"><span class="permalink"><a href="#a27f000c3a3ea74c49db31716be3396d4">&#9670;&nbsp;</a></span>slit_shift()</h2>
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<td class="memname">threadsafe variable slit_shift </td>
<td>(</td>
<td class="paramtype">variable&#160;</td>
<td class="paramname"><em>ypix</em>, </td>
</tr>
<tr>
<td class="paramkey"></td>
<td></td>
<td class="paramtype">variable&#160;</td>
<td class="paramname"><em>epass</em>&#160;</td>
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<td></td>
<td>)</td>
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<p class="definition">Definition at line <a class="el" href="fermi-edge-analysis_8ipf_source.html#l00267">267</a> of file <a class="el" href="fermi-edge-analysis_8ipf_source.html">fermi-edge-analysis.ipf</a>.</p>
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<h2 class="groupheader">Variable Documentation</h2>
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<h2 class="memtitle"><span class="permalink"><a href="#a0cb8da36beae05c79fe5b1da918d3897">&#9670;&nbsp;</a></span>hemi_radius_mm</h2>
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<td class="memname">const variable hemi_radius_mm = 200</td>
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</td>
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<span class="mlabels"><span class="mlabel">static</span></span> </td>
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<p>physical size (radius) of the hemisphere in mm </p>
<p class="definition">Definition at line <a class="el" href="fermi-edge-analysis_8ipf_source.html#l00263">263</a> of file <a class="el" href="fermi-edge-analysis_8ipf_source.html">fermi-edge-analysis.ipf</a>.</p>
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<a id="a4749b9bce3e1d0381bd9daeb97c9754c"></a>
<h2 class="memtitle"><span class="permalink"><a href="#a4749b9bce3e1d0381bd9daeb97c9754c">&#9670;&nbsp;</a></span>mcp_radius_epass</h2>
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<td class="memname">const variable mcp_radius_epass = 0.04</td>
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<span class="mlabels"><span class="mlabel">static</span></span> </td>
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<p>energy range imaged on MCP relative to the pass energy </p>
<p class="definition">Definition at line <a class="el" href="fermi-edge-analysis_8ipf_source.html#l00265">265</a> of file <a class="el" href="fermi-edge-analysis_8ipf_source.html">fermi-edge-analysis.ipf</a>.</p>
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<h2 class="memtitle"><span class="permalink"><a href="#a4dcc00b93822f1663be2908b10d2ad3e">&#9670;&nbsp;</a></span>mcp_radius_mm</h2>
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<td class="memname">const variable mcp_radius_mm = 20</td>
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</td>
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<span class="mlabels"><span class="mlabel">static</span></span> </td>
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<p>physical size (radius) of the MCP in mm </p>
<p class="definition">Definition at line <a class="el" href="fermi-edge-analysis_8ipf_source.html#l00261">261</a> of file <a class="el" href="fermi-edge-analysis_8ipf_source.html">fermi-edge-analysis.ipf</a>.</p>
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<h2 class="memtitle"><span class="permalink"><a href="#a09f26b0a0fd940a3d8c6f92aa769c8bc">&#9670;&nbsp;</a></span>mcp_radius_pix</h2>
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<td class="memname">const variable mcp_radius_pix = 555</td>
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<p>MCP radius seen by the camera in pixels. </p>
<p class="definition">Definition at line <a class="el" href="fermi-edge-analysis_8ipf_source.html#l00259">259</a> of file <a class="el" href="fermi-edge-analysis_8ipf_source.html">fermi-edge-analysis.ipf</a>.</p>
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<li class="navelem"><a class="el" href="dir_fe5dc42579d4b99403482a3a637d9f7d.html">pearl</a></li><li class="navelem"><a class="el" href="fermi-edge-analysis_8ipf.html">fermi-edge-analysis.ipf</a></li>
<li class="footer">Generated on Sun Feb 10 2019 14:39:17 for PEARL Procedures by
<li class="footer">Generated on Thu Feb 28 2019 18:57:24 for PEARL Procedures by
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