PEARL Procedures
rev-distro-2.0.0-0-gfda49c3-dirty
Igor procedures for the analysis of PEARL data
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interactive processing of angle scanned XPD data. More...
#include "pearl-anglescan-process"
#include "pearl-pmsco-import"
Go to the source code of this file.
Namespaces | |
PearlAnglescanPanel | |
interactive processing of angle scanned XPD data. | |
Functions | |
static variable | AfterCompiledHook () |
initialize package data once when the procedure is first loaded More... | |
static variable | init_package () |
static variable | save_prefs () |
save persistent package data to the preferences file. More... | |
static variable | load_prefs () |
load persistent package data from the preferences file. More... | |
variable | asp_import_raw (wave raw_data) |
import raw data More... | |
variable | asp_display_previews () |
display a graph window of the processed data. More... | |
variable | asp_display_dist_check (variable xdist, variable ydist) |
display a graph window of the distribution checks. More... | |
static variable | do_init_process (variable check) |
initialize the process data with a copy of the raw data. More... | |
static variable | do_crop_alpha (variable check, variable force=defaultValue) |
alpha-crop the process data. More... | |
static variable | do_norm_alpha (variable check, variable force=defaultValue) |
alpha-normalize the process data. More... | |
static variable | do_norm_phi (variable check, variable force=defaultValue) |
phi-normalize the process data. More... | |
static variable | do_norm_theta (variable check, variable force=defaultValue) |
theta-normalize the process data. More... | |
static variable | do_norm_thetaphi (variable check, variable force=defaultValue) |
theta,phi-normalize the process data. More... | |
variable | asp_calculate_output () |
calculate the output using all enabled processing filters. More... | |
variable | asp_display_output () |
display the output diffractogram in a new graph More... | |
variable | asp_update_graph () |
update graphs with new color table or contrast More... | |
variable | asp_close_graphs () |
close all graphs created by the angle scan panel More... | |
variable | asp_duplicate_output (string dest_name) |
copy the output data to a new folder More... | |
variable | asp_save_output_itx () |
save the output diffractogram to an igor text file More... | |
variable | asp_save_output_etpi (variable ekin) |
save the output diffractogram to a PMSCO ETPI file More... | |
static variable | check_norm_alpha () |
static variable | check_norm_phi () |
static variable | check_norm_theta () |
static variable | check_norm_thetaphi () |
static variable | preview_crop_alpha () |
static variable | preview_norm_alpha () |
static variable | preview_norm_phi () |
static variable | preview_norm_theta () |
static variable | preview_norm_thetaphi () |
variable | asp_show_panel () |
create the angle scan processing panel More... | |
static variable | arrange_controls () |
static variable | update_menus () |
update the popup menus to reflect the values of the global variables More... | |
static variable | bp_source_select (WMButtonAction *ba) |
static variable | bp_norm_alpha_check (WMButtonAction *ba) |
static variable | bp_norm_theta_check (WMButtonAction *ba) |
static variable | bp_norm_phi_check (WMButtonAction *ba) |
static variable | bp_norm_thetaphi_check (WMButtonAction *ba) |
static variable | bp_crop_alpha_preview (WMButtonAction *ba) |
static variable | bp_norm_alpha_preview (WMButtonAction *ba) |
static variable | bp_norm_phi_preview (WMButtonAction *ba) |
static variable | bp_norm_theta_preview (WMButtonAction *ba) |
static variable | bp_norm_thetaphi_preview (WMButtonAction *ba) |
static variable | bp_output_calc (WMButtonAction *ba) |
static variable | bp_output_duplicate (WMButtonAction *ba) |
static variable | bp_output_etpi (WMButtonAction *ba) |
static variable | bp_output_itx (WMButtonAction *ba) |
static variable | bp_graph_update (WMButtonAction *ba) |
static variable | bp_graph_png (WMButtonAction *ba) |
static variable | pmp_norm_alpha_mode (WMPopupAction *pa) |
static variable | pmp_norm_theta_mode (WMPopupAction *pa) |
static variable | pmp_norm_thetaphi_mode (WMPopupAction *pa) |
static variable | pmp_graph_mode (WMPopupAction *pa) |
static variable | pmp_graph_projection (WMPopupAction *pa) |
static variable | pmp_graph_colortable (WMPopupAction *pa) |
Variables | |
static const string | package_name = "pearl_anglescan_panel" |
package name is used as data folder name More... | |
static const string | package_path = "root:packages:pearl_anglescan_panel:" |
data folder path More... | |
static const string | prefs_objects = "theta_offset;tilt_offset;phi_offset;alpha_offset;crop_alpha_enable;crop_alpha_value;norm_alpha_enable;norm_alpha_mode;norm_alpha_smoothing;norm_phi_enable;norm_phi_mode;norm_phi_thetarange;norm_theta_enable;norm_theta_mode;norm_theta_smoothing;norm_thetaphi_enable;norm_thetaphi_mode;norm_theta_smoothing;output_folding;output_horizon;graph_mode;graph_projection;graph_colortable;graph_contrast;" |
semicolon-separated list of persistent variable, string, and wave names More... | |
interactive processing of angle scanned XPD data.
steps to process a hemispherical scan into a diffractogram:
Definition in file pearl-anglescan-panel.ipf.
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initialize package data once when the procedure is first loaded
Definition at line 52 of file pearl-anglescan-panel.ipf.
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Definition at line 908 of file pearl-anglescan-panel.ipf.
variable asp_calculate_output | ( | ) |
calculate the output using all enabled processing filters.
the diffractogram is calculated, to display the graph, call asp_display_graph.
Definition at line 542 of file pearl-anglescan-panel.ipf.
variable asp_close_graphs | ( | ) |
close all graphs created by the angle scan panel
Definition at line 615 of file pearl-anglescan-panel.ipf.
variable asp_display_dist_check | ( | variable | xdist, |
variable | ydist | ||
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display a graph window of the distribution checks.
if the window exists, it is updated and brought to the front of the window stack.
xdist | 1: display the x-distribution; 0: don't. |
ydist | 1: display the y-distribution; 0: don't. |
Definition at line 266 of file pearl-anglescan-panel.ipf.
variable asp_display_output | ( | ) |
display the output diffractogram in a new graph
Definition at line 577 of file pearl-anglescan-panel.ipf.
variable asp_display_previews | ( | ) |
display a graph window of the processed data.
if the window exists, it is updated and brought to the front of the window stack.
Definition at line 242 of file pearl-anglescan-panel.ipf.
variable asp_duplicate_output | ( | string | dest_name | ) |
copy the output data to a new folder
dest_name | name of destination folder. can contain a relative (starting with a colon) or absolute (starting with "root:") path. folders in the path must exist except for the last one. the destination folder does not need to exist. existing data in the destination folder is overwritten. |
Definition at line 650 of file pearl-anglescan-panel.ipf.
variable asp_import_raw | ( | wave | raw_data | ) |
import raw data
the raw data are copied into the package data folder, and the process waves are initialized.
raw_data | 2D intensity distribution. the x dimension is the detection angle. the y dimension is an arbitrary sequence of manipulator scan positions. ManipulatorTheta, ManipulatorPilt and ManipulatorPhi waves that indicate the manipulator angles for each y position must be present in the :attr sub-folder next to the raw data wave. |
Definition at line 197 of file pearl-anglescan-panel.ipf.
variable asp_save_output_etpi | ( | variable | ekin | ) |
save the output diffractogram to a PMSCO ETPI file
ekin | kinetic energy in eV |
Definition at line 687 of file pearl-anglescan-panel.ipf.
variable asp_save_output_itx | ( | ) |
save the output diffractogram to an igor text file
Definition at line 672 of file pearl-anglescan-panel.ipf.
variable asp_show_panel | ( | ) |
create the angle scan processing panel
Definition at line 771 of file pearl-anglescan-panel.ipf.
variable asp_update_graph | ( | ) |
update graphs with new color table or contrast
applies to the preview graph and the diffractogram.
Definition at line 597 of file pearl-anglescan-panel.ipf.
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Definition at line 1162 of file pearl-anglescan-panel.ipf.
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Definition at line 1316 of file pearl-anglescan-panel.ipf.
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Definition at line 1302 of file pearl-anglescan-panel.ipf.
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Definition at line 1106 of file pearl-anglescan-panel.ipf.
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Definition at line 1176 of file pearl-anglescan-panel.ipf.
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Definition at line 1134 of file pearl-anglescan-panel.ipf.
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Definition at line 1190 of file pearl-anglescan-panel.ipf.
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Definition at line 1120 of file pearl-anglescan-panel.ipf.
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Definition at line 1204 of file pearl-anglescan-panel.ipf.
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Definition at line 1148 of file pearl-anglescan-panel.ipf.
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Definition at line 1218 of file pearl-anglescan-panel.ipf.
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Definition at line 1232 of file pearl-anglescan-panel.ipf.
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Definition at line 1247 of file pearl-anglescan-panel.ipf.
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Definition at line 1266 of file pearl-anglescan-panel.ipf.
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Definition at line 1288 of file pearl-anglescan-panel.ipf.
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Definition at line 1080 of file pearl-anglescan-panel.ipf.
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Definition at line 707 of file pearl-anglescan-panel.ipf.
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Definition at line 714 of file pearl-anglescan-panel.ipf.
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Definition at line 721 of file pearl-anglescan-panel.ipf.
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Definition at line 728 of file pearl-anglescan-panel.ipf.
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alpha-crop the process data.
[in] | check | select which output to generate (currently not used).
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[in] | force | override the global enable flag.
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Definition at line 351 of file pearl-anglescan-panel.ipf.
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initialize the process data with a copy of the raw data.
applies the angle offsets.
[in] | check | select which output to generate (currently not used).
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Definition at line 311 of file pearl-anglescan-panel.ipf.
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alpha-normalize the process data.
[in] | check | select which output to generate.
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[in] | force | override the global enable flag.
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Definition at line 380 of file pearl-anglescan-panel.ipf.
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phi-normalize the process data.
[in] | check | select which output to generate.
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[in] | force | override the global enable flag.
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Definition at line 421 of file pearl-anglescan-panel.ipf.
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theta-normalize the process data.
[in] | check | select which output to generate.
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[in] | force | override the global enable flag.
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Definition at line 464 of file pearl-anglescan-panel.ipf.
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theta,phi-normalize the process data.
[in] | check | select which output to generate.
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[in] | force | override the global enable flag.
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Definition at line 506 of file pearl-anglescan-panel.ipf.
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Definition at line 77 of file pearl-anglescan-panel.ipf.
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load persistent package data from the preferences file.
the preferences file is an Igor packed experiment file in a special preferences folder.
this function is called automatically when the procedure is first compiled, or whenever the user clicks the corresponding button.
Definition at line 161 of file pearl-anglescan-panel.ipf.
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Definition at line 1415 of file pearl-anglescan-panel.ipf.
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Definition at line 1383 of file pearl-anglescan-panel.ipf.
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Definition at line 1399 of file pearl-anglescan-panel.ipf.
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Definition at line 1335 of file pearl-anglescan-panel.ipf.
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Definition at line 1351 of file pearl-anglescan-panel.ipf.
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Definition at line 1367 of file pearl-anglescan-panel.ipf.
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Definition at line 735 of file pearl-anglescan-panel.ipf.
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Definition at line 741 of file pearl-anglescan-panel.ipf.
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Definition at line 748 of file pearl-anglescan-panel.ipf.
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Definition at line 755 of file pearl-anglescan-panel.ipf.
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Definition at line 762 of file pearl-anglescan-panel.ipf.
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save persistent package data to the preferences file.
this function is called when the user clicks the corresponding button.
Definition at line 137 of file pearl-anglescan-panel.ipf.
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update the popup menus to reflect the values of the global variables
Definition at line 1054 of file pearl-anglescan-panel.ipf.
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package name is used as data folder name
Definition at line 45 of file pearl-anglescan-panel.ipf.
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data folder path
Definition at line 47 of file pearl-anglescan-panel.ipf.
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semicolon-separated list of persistent variable, string, and wave names
Definition at line 49 of file pearl-anglescan-panel.ipf.