Spencer Bliven
98daea70bd
Also standardize the MotionCor2 wrapper so that it's the same for all module versions regardless of cuda support
22 lines
608 B
Bash
Executable File
22 lines
608 B
Bash
Executable File
#!/bin/bash
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# Script directory. Better than $MOTIONCOR2_HOME/bin since it can be called without loading modules.
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BIN="$( cd "$( dirname "${BASH_SOURCE[0]}" )" >/dev/null 2>&1 && pwd )"
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if [ -z ${CUDA_VERSION} ]; then
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echo 'MotionCor2 requires the cuda module. Run `module load cuda/<version>`' >&2
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exit 1
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fi
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CUDA=$(echo "${CUDA_VERSION}" | sed -r 's/([0-9]+)\.([0-9]+)(\..*)/\1\2/')
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EXE=$(echo "$BIN"/MotionCor2_*_Cuda${CUDA}*)
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#echo "Running $EXE"
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if [ ! -x "$EXE" ]; then
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echo "MotionCor2/$MOTIONCOR2_VERSION is not compatible with cuda/$CUDA_VERSION" >&2
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exit 1
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fi
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exec "$EXE" "$@"
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