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MX_Pmodule/PanDDA2/modulefile
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duan_jandClaude Fable 5 4ffc1b152d PanDDA2 1.0.0: new module, uv venv from sha-pinned xchem/PanDDA2
Separate module from PanDDA (different library): self-contained python 3.9
venv (torch==1.13.1 caps at py3.10), torch from the pytorch CPU wheel index,
~1 GB of CNN scoring models pre-fetched at build time because the package dir
is read-only for users under /opt/psi. ccp4/9.0 runtime dep only, for
pandda.inspect / pandda.export.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_0152MuuYUaapP7CtxrDAfvBh
2026-08-24 20:43:11 +02:00

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#%Module1.0
module-whatis "PanDDA 2: multi-dataset density analysis for fragment screening (pandda2.analyse)"
module-url "https://github.com/xchem/PanDDA2"
module-license "Apache-2.0"
module-maintainer "Jiaxin Duan <jiaxin.duan@psi.ch>"
module-help "
PanDDA 2 (pandda_2_gemmi) in a self-contained python 3.9 venv, CNN scoring
models pre-downloaded at build time. ccp4/9.0 is auto-loaded as a runtime
dependency for pandda.inspect / pandda.export.
Main entry point: pandda2.analyse
"
setenv PANDDA2_ENV $PREFIX/venv
prepend-path PATH $PREFIX/venv/bin