35 lines
892 B
YAML
35 lines
892 B
YAML
name: relion-5.0
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channels:
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- conda-forge
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dependencies:
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- pip
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- python=3.9
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- setuptools=59.5.0
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- pip:
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- torch==2.0.1
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- torchvision==0.15.2
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- tqdm==4.65.0
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- mrcfile==1.4.3
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- starfile>=0.5.6
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- loguru==0.7.0
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- scikit-learn==1.3.0
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- umap-learn==0.5.3
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- matplotlib==3.7.2
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- morphosamplers==0.0.13
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- pydantic==1.10.18
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- napari[all]==0.4.18
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- tsnecuda==3.0.1
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- PyQt5==5.15.9
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- typer==0.9.0
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- biopython==1.81
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- fastcluster==1.2.6
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- seaborn==0.12.2
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- dill==0.3.7
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- numpy<2
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- git+https://github.com/3dem/relion-classranker@b6e751e5cb4205d8e9b36d0ae38c3687b3395acb
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- git+https://github.com/3dem/relion-blush
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- git+https://github.com/3dem/DynaMight
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- git+https://github.com/3dem/topaz
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- git+https://github.com/3dem/model-angelo
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- ".[vis]"
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